RLG00000029011

Argininosuccinate lyase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
31464847 .. 31467144
2298 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029011

Sequence Viewer

Length: 405 bp
ATGCCATCGAGCGACGCAGTCAAGCCTTTCACCGAATCCATCTTCTTCGACAAAGTCTTCTACAAGCATGACATCATGGGCAGGAAGGCCCACACCTCAATGCTCCCCAAACAGGGATTCATCACTGTCGAGGATAGGGTTAGCATTCATGAAGGGATTACGGAGATTCAGAGGCGAATTGAGGAGATAGGGAAGATAAACAATCAGTTGTTTCTTATAATCAAGAGGAGCTTAAAGCGATGCAGTGCTTTAAGAAAGAACCAGACATTATTTAACTTGTTCAAGGGAGCTTGTTCACTTGATAGGAAGGATGCAGCCATGCTAGTGAAGCCATATTTGCAGTCTCTGGTTGTTTCTCGTCTAATCTGTCATTATGATGCTCAAAGAAGCCATAAAAAGGGCTAA

Protein Analysis

135

Amino Acids

15.47

Weight (kDa)

9.87

Isoelectric Point (pI)

63.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 218
AfiI CCNNNNNNNGG 3 cut(s) 112, 113, 397
AgsI TTSAA 1 cut(s) 283
AjuI GAANNNNNNNTTGG 2 cut(s) 101, 133
AluBI AGCT 2 cut(s) 231, 290
AluI AGCT 2 cut(s) 231, 290
Alw26I GTCTC 1 cut(s) 348
AlwNI CAGNNNCTG 1 cut(s) 346
AoxI GGCC 1 cut(s) 87
ApeKI GCWGC 1 cut(s) 314
AspS9I GGNCC 1 cut(s) 88
AsuHPI GGTGA 1 cut(s) 22
BbsI GAAGAC 1 cut(s) 49
BbvI GCAGC 1 cut(s) 326
BccI CCATC 2 cut(s) 13, 47
BcoDI GTCTC 1 cut(s) 348
BfaI CTAG 1 cut(s) 323
BisI GCNGC 1 cut(s) 315
BlsI GCNGC 1 cut(s) 316
BmgT120I GGNCC 1 cut(s) 88
BmsI GCATC 3 cut(s) 230, 301, 367
BpiI GAAGAC 1 cut(s) 49
Bsc4I CCNNNNNNNGG 3 cut(s) 112, 113, 397
BseGI GGATG 1 cut(s) 316
BseLI CCNNNNNNNGG 3 cut(s) 112, 113, 397
BseRI GAGGAG 2 cut(s) 197, 241
BseXI GCAGC 1 cut(s) 326
BshFI GGCC 1 cut(s) 89
BslI CCNNNNNNNGG 3 cut(s) 112, 113, 397
BsmAI GTCTC 1 cut(s) 348
BsmI GAATGC 1 cut(s) 144
BsnI GGCC 1 cut(s) 89
BspANI GGCC 1 cut(s) 89
BspHI TCATGA 1 cut(s) 148
Bst4CI ACNGT 1 cut(s) 127
BstF5I GGATG 1 cut(s) 316
BstMAI GTCTC 1 cut(s) 348
BstMWI GCNNNNNNNGC 2 cut(s) 328, 337
BstV1I GCAGC 1 cut(s) 326
BstV2I GAAGAC 1 cut(s) 49
BsuRI GGCC 1 cut(s) 89
BtgZI GCGATG 1 cut(s) 253
BtsCI GGATG 1 cut(s) 316
BtsI GCAGTG 1 cut(s) 250
BtsIMutI CAGTG 2 cut(s) 123, 250
CaiI CAGNNNCTG 1 cut(s) 346
CciI TCATGA 1 cut(s) 148
Cfr13I GGNCC 1 cut(s) 88
CseI GACGC 1 cut(s) 23
CviAII CATG 4 cut(s) 68, 76, 149, 319
CviJI RGCY 8 cut(s) 25, 89, 231, 290, 317, 331, 390, 402
CviKI_1 RGCY 8 cut(s) 25, 89, 231, 290, 317, 331, 390, 402
FaeI CATG 4 cut(s) 71, 79, 152, 322
FaiI YATR 8 cut(s) 69, 77, 150, 218, 320, 334, 375, 393
FalI AAGNNNNNCTT 2 cut(s) 215, 247
FatI CATG 4 cut(s) 67, 75, 148, 318
Fnu4HI GCNGC 1 cut(s) 315
FokI GGATG 1 cut(s) 323
Fsp4HI GCNGC 1 cut(s) 315
FspBI CTAG 1 cut(s) 323
GluI GCNGC 1 cut(s) 315
HaeIII GGCC 1 cut(s) 89
HgaI GACGC 1 cut(s) 23
Hin1II CATG 4 cut(s) 71, 79, 152, 322
HinfI GANTC 3 cut(s) 35, 117, 166
HphI GGTGA 1 cut(s) 22
Hpy166II GTNNAC 1 cut(s) 296
Hpy188I TCNGA 1 cut(s) 171
Hpy188III TCNNGA 2 cut(s) 149, 223
Hpy8I GTNNAC 1 cut(s) 296
Hpy99I CGWCG 1 cut(s) 17
HpyAV CCTTC 3 cut(s) 79, 146, 301
HpyCH4III ACNGT 1 cut(s) 127
HpyCH4V TGCA 3 cut(s) 243, 314, 340
HpyF10VI GCNNNNNNNGC 2 cut(s) 328, 337
Hsp92II CATG 4 cut(s) 71, 79, 152, 322
LmnI GCTCC 3 cut(s) 108, 228, 287
LpnPI CCDG 4 cut(s) 67, 98, 275, 332
Lsp1109I GCAGC 1 cut(s) 326
LweI GCATC 3 cut(s) 230, 301, 367
MaeI CTAG 1 cut(s) 323
MboII GAAGA 4 cut(s) 34, 37, 49, 205
MluCI AATT 1 cut(s) 177
MnlI CCTC 5 cut(s) 106, 124, 165, 175, 219
MseI TTAA 3 cut(s) 233, 251, 273
MslI CAYNNNNRTG 3 cut(s) 98, 323, 375
Mva1269I GAATGC 1 cut(s) 144
MwoI GCNNNNNNNGC 2 cut(s) 328, 337
NlaIII CATG 4 cut(s) 71, 79, 152, 322
PagI TCATGA 1 cut(s) 148
PctI GAATGC 1 cut(s) 144
PfeI GAWTC 3 cut(s) 35, 117, 166
PflFI GACNNNGTC 2 cut(s) 17, 53
PkrI GCNGC 1 cut(s) 316
PsiI TTATAA 1 cut(s) 218
PspPI GGNCC 1 cut(s) 88
PstNI CAGNNNCTG 1 cut(s) 346
PsyI GACNNNGTC 2 cut(s) 17, 53
RseI CAYNNNNRTG 3 cut(s) 98, 323, 375
SaqAI TTAA 3 cut(s) 233, 251, 273
SatI GCNGC 1 cut(s) 315
Sau96I GGNCC 1 cut(s) 88
SetI ASST 3 cut(s) 98, 233, 292
SfaNI GCATC 3 cut(s) 230, 301, 367
SmiMI CAYNNNNRTG 3 cut(s) 98, 323, 375
Sse9I AATT 1 cut(s) 177
SspMI CTAG 1 cut(s) 323
TaaI ACNGT 1 cut(s) 127
TaqI TCGA 3 cut(s) 8, 48, 129
TasI AATT 1 cut(s) 177
TfiI GAWTC 3 cut(s) 35, 117, 166
Tru1I TTAA 3 cut(s) 233, 251, 273
Tru9I TTAA 3 cut(s) 233, 251, 273
TscAI CASTG 2 cut(s) 130, 250
TseI GCWGC 1 cut(s) 314
TspDTI ATGAA 3 cut(s) 109, 137, 165
TspGWI ACGGA 1 cut(s) 176
TspRI CASTG 2 cut(s) 130, 250
Tth111I GACNNNGTC 2 cut(s) 17, 53
XspI CTAG 1 cut(s) 323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.