RLG00000030037

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
53711453 .. 53717135
5683 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030037

Sequence Viewer

Length: 1584 bp
ATGATTCCTGTTATTGTAGTATTACTTTTCTTTGCCTCATCCATCATTTTAGGCTTTCTTATCCAAAAAACGAAGCGAGTAGTACTCCCACCAGTGCCACCTCTCCCTCCAGGACCAAGCCCATGGCCGATCATTGGATGTGTACCAGAGATGTGGAGGAACAGACCAGCATACAGATGGATACATGACCTTCTGAAACAGCTTAACACTGATATTGCATGTGTACGACTAGGAAAAGTTCATGTGATCGCAGTCAAATCACCTGAAATTGCCAGAGAATTCTTGAAAAAACACGACGCTGTTTTCGCATCACGACCCATTACCATGGCTACTCACCTCTTCAGTAGTGGATACTTGACAGTAGGTGTTACACCTATGGGAGAGCAGTGGAAGAAAATGAGAAGGGTTTTGATTGCCGAAGTGTTTAATCAGTCCAGACTACGGTGGCTACTCGATAAGAGGAATGATGAAGCGGACAATCTTGTGAAGTTTCTCTATAGTCAGTGCTCGAATAGCGAGAATGGTTCGGTGGTGAATGTGAGAATTGCAGCCCAACATTACTCAGCAAATGTGATGAGAAGAATGTTCTTCAACACGAGGTACTTTGGCAAAGGGAGAGAAAATGGAGGGCCAGGACTTGAAGAAGAATTACACGTCTCTGCGCTTTTCACATTGGTCTTGCATACGTATGCATTCTGTGTATCCGATTGCCTTCCATGGTTGAGACCGTTTGACATAGGTGGGCATGAGAAAAAGGTCAAGGATGCTTTGAAAATTATCAAGCAGTATCAGGACCCTATTATAGATGAGACAGTACGAAAGTGGAGGTGCTCAAATCAGGAGAATAGGATCAAGGCGCCTGTAGAGGAGAGCCTGCTCGATGTTTTCATCTCACTCAAAGGTGCAGATGGGCAGCCTTTATTATCTGCTGAAGAAATCAAAGCACAAATCACTGAACTACAGCTTGCCACGGTGGATAATCCCTTCAGTATATCAGAGTGGGCTCTATCAGAAATGCTGAACCAACCTGAGATGCTTACAAAAGCACAAGAGGAACTAAATAGGATAGTGGGAATCGACATGCTTGTTCAAGAATCTCATATCCCTCATCTCCCTTACATAAGGGCTTGTGCAAGAGAATCGCTCCGGCTGCATCCAGTTGCCCCATTCAATCTTCCCCATGTTTCCACTGATGATGCTATAGTAGCAGGCTACTTCATCCCAAAGGGAAGTAGTGTTATTCTAAGTCGTTTAGGCCTCGGACGCAACCCCAAAGTCTGGGAAAATCCATTGAGATTCGACCCCGAGCGTCATTTAAGTGGAGATGCCAGTCAACAGGTGGAGCTGGAAGAACATGAGCTGAGGTTCATTTCATTTACTACTGGAAGGAGAGGTTGCATGGGTGGTACGCTTGGGACTACCATATCTGTGATGCTCTTTGCTAGGCTTCTTCAAGGGTTTACATGGAGCATGCCACCCAAGGTGGATAAGATTGACCTCACTGAGGCTCCAACCCTTTTCAAGCTCAATCCTTTGCATGCACATGCTAAACCTCGCTTGCCTGCTGCTATGTATCCGGTTTAG

Protein Analysis

528

Amino Acids

59.58

Weight (kDa)

8.96

Isoelectric Point (pI)

46.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 509 4.1e-78 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 856
AccB7I CCANNNNNTGG 1 cut(s) 1278
AciI CCGC 1 cut(s) 473
AclWI GGATC 1 cut(s) 857
AcoI YGGCCR 1 cut(s) 125
AcsI RAATTY 1 cut(s) 278
AcuI CTGAAG 3 cut(s) 325, 951, 970
AcyI GRCGYC 1 cut(s) 857
AfaI GTAC 6 cut(s) 84, 144, 225, 602, 816, 1408
AfiI CCNNNNNNNGG 4 cut(s) 134, 441, 1278, 1504
AflIII ACRYGT 1 cut(s) 652
AgsI TTSAA 8 cut(s) 286, 592, 641, 772, 1091, 1171, 1454, 1522
AjiI CACGTC 1 cut(s) 655
AjnI CCWGG 2 cut(s) 109, 631
AluBI AGCT 5 cut(s) 202, 964, 1345, 1360, 1525
AluI AGCT 5 cut(s) 202, 964, 1345, 1360, 1525
Alw21I GWGCWC 2 cut(s) 509, 833
Alw26I GTCTC 3 cut(s) 661, 718, 803
AlwI GGATC 1 cut(s) 857
Ama87I CYCGRG 1 cut(s) 1304
AoxI GGCC 3 cut(s) 125, 629, 1255
ApeKI GCWGC 4 cut(s) 548, 913, 1150, 1565
ApoI RAATTY 1 cut(s) 278
ArsI GACNNNNNNTTYG 2 cut(s) 287, 319
AspLEI GCGC 2 cut(s) 664, 859
AspS9I GGNCC 3 cut(s) 113, 629, 793
AsuHPI GGTGA 3 cut(s) 252, 326, 544
AvaI CYCGRG 1 cut(s) 1304
AvaII GGWCC 2 cut(s) 113, 793
BanI GGYRCC 1 cut(s) 856
BanII GRGCYC 1 cut(s) 1006
BarI GAAGNNNNNNTAC 2 cut(s) 633, 665
BauI CACGAG 1 cut(s) 595
Bbv12I GWGCWC 2 cut(s) 509, 833
BbvCI CCTCAGC 1 cut(s) 1361
BbvI GCAGC 4 cut(s) 560, 925, 1137, 1552
BccI CCATC 3 cut(s) 50, 171, 902
BcgI CGANNNNNNTGC 2 cut(s) 1122, 1156
BciT130I CCWGG 2 cut(s) 111, 633
BciVI GTATCC 4 cut(s) 174, 344, 712, 1584
BcoDI GTCTC 3 cut(s) 661, 718, 803
BfaI CTAG 2 cut(s) 230, 1443
BfmI CTRYAG 4 cut(s) 496, 861, 959, 1200
BfoI RGCGCY 1 cut(s) 860
BfuI GTATCC 4 cut(s) 174, 344, 712, 1584
BisI GCNGC 4 cut(s) 549, 914, 1151, 1566
BlsI GCNGC 4 cut(s) 550, 915, 1152, 1567
BmcAI AGTACT 1 cut(s) 84
Bme1390I CCNGG 2 cut(s) 111, 633
Bme18I GGWCC 2 cut(s) 113, 793
BmeT110I CYCGRG 1 cut(s) 1304
BmgBI CACGTC 1 cut(s) 655
BmgT120I GGNCC 3 cut(s) 113, 629, 793
BmiI GGNNCC 3 cut(s) 795, 858, 1509
BmrFI CCNGG 2 cut(s) 111, 633
BmsI GCATC 7 cut(s) 317, 754, 1023, 1162, 1186, 1315, 1422
BplI GAGNNNNNCTC 4 cut(s) 69, 101, 1128, 1160
BpmI CTGGAG 1 cut(s) 93
Bpu10I CCTNAGC 1 cut(s) 1361
BsaAI YACGTR 1 cut(s) 687
BsaHI GRCGYC 1 cut(s) 857
BsaI GGTCTC 1 cut(s) 718
BsaJI CCNNGG 6 cut(s) 122, 324, 716, 969, 1258, 1479
BsaWI WCCGGW 1 cut(s) 1576
BsaXI ACNNNNNCTCC 2 cut(s) 1492, 1522
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 441, 1278, 1504
Bse1I ACTGG 4 cut(s) 92, 1157, 1329, 1387
BseBI CCWGG 2 cut(s) 111, 633
BseDI CCNNGG 6 cut(s) 122, 324, 716, 969, 1258, 1479
BseGI GGATG 5 cut(s) 38, 143, 769, 1153, 1218
BseLI CCNNNNNNNGG 4 cut(s) 134, 441, 1278, 1504
BseMII CTCAG 4 cut(s) 576, 1020, 1352, 1494
BseNI ACTGG 4 cut(s) 92, 1157, 1329, 1387
BseRI GAGGAG 1 cut(s) 881
BseXI GCAGC 4 cut(s) 560, 925, 1137, 1552
BsgI GTGCAG 1 cut(s) 924
BshFI GGCC 3 cut(s) 127, 631, 1257
BshNI GGYRCC 1 cut(s) 856
BsiHKAI GWGCWC 2 cut(s) 509, 833
BsiHKCI CYCGRG 1 cut(s) 1304
BsiSI CCGG 2 cut(s) 1147, 1577
BslFI GGGAC 1 cut(s) 1429
BslI CCNNNNNNNGG 4 cut(s) 134, 441, 1278, 1504
BsmAI GTCTC 3 cut(s) 661, 718, 803
BsmBI CGTCTC 1 cut(s) 661
BsmFI GGGAC 1 cut(s) 1429
BsmI GAATGC 1 cut(s) 692
BsnI GGCC 3 cut(s) 127, 631, 1257
Bso31I GGTCTC 1 cut(s) 718
BsoBI CYCGRG 1 cut(s) 1304
Bsp1286I GDGCHC 3 cut(s) 509, 833, 1006
Bsp143I GATC 3 cut(s) 129, 246, 849
Bsp19I CCATGG 3 cut(s) 122, 324, 716
BspACI CCGC 1 cut(s) 473
BspANI GGCC 3 cut(s) 127, 631, 1257
BspCNI CTCAG 4 cut(s) 575, 1021, 1353, 1495
BspLI GGNNCC 3 cut(s) 795, 858, 1509
BspPI GGATC 1 cut(s) 857
BspT107I GGYRCC 1 cut(s) 856
BspTNI GGTCTC 1 cut(s) 718
BsrI ACTGG 4 cut(s) 92, 1157, 1329, 1387
BssECI CCNNGG 6 cut(s) 122, 324, 716, 969, 1258, 1479
BssMI GATC 3 cut(s) 129, 246, 849
BssNI GRCGYC 1 cut(s) 857
BssSI CACGAG 1 cut(s) 595
BssT1I CCWWGG 4 cut(s) 122, 324, 716, 1479
Bst2BI CACGAG 1 cut(s) 595
Bst2UI CCWGG 2 cut(s) 111, 633
Bst4CI ACNGT 5 cut(s) 361, 444, 729, 814, 973
Bst6I CTCTTC 1 cut(s) 344
BstACI GRCGYC 1 cut(s) 857
BstBAI YACGTR 1 cut(s) 687
BstC8I GCNNGC 7 cut(s) 875, 966, 1210, 1472, 1539, 1559, 1563
BstDEI CTNAG 5 cut(s) 562, 1029, 1244, 1361, 1503
BstDSI CCRYGG 4 cut(s) 122, 324, 716, 969
BstENI CCTNNNNNAGG 1 cut(s) 1502
BstF5I GGATG 5 cut(s) 38, 143, 769, 1153, 1218
BstH2I RGCGCY 1 cut(s) 860
BstHHI GCGC 2 cut(s) 664, 859
BstKTI GATC 3 cut(s) 132, 249, 852
BstMAI GTCTC 3 cut(s) 661, 718, 803
BstMBI GATC 3 cut(s) 129, 246, 849
BstMWI GCNNNNNNNGC 5 cut(s) 305, 513, 1150, 1205, 1263
BstNI CCWGG 2 cut(s) 111, 633
BstNSI RCATGY 5 cut(s) 222, 1084, 1474, 1541, 1547
BstSCI CCNGG 2 cut(s) 109, 631
BstSFI CTRYAG 4 cut(s) 496, 861, 959, 1200
BstSNI TACGTA 1 cut(s) 687
BstV1I GCAGC 4 cut(s) 560, 925, 1137, 1552
BstXI CCANNNNNNTGG 3 cut(s) 123, 153, 325
BsuI GTATCC 4 cut(s) 174, 344, 712, 1584
BsuRI GGCC 3 cut(s) 127, 631, 1257
BtgI CCRYGG 4 cut(s) 122, 324, 716, 969
BtrI CACGTC 1 cut(s) 655
BtsCI GGATG 5 cut(s) 38, 143, 769, 1153, 1218
BtsI GCAGTG 1 cut(s) 392
BtsIMutI CAGTG 7 cut(s) 99, 207, 392, 509, 951, 1188, 1500
Cac8I GCNNGC 7 cut(s) 875, 966, 1210, 1472, 1539, 1559, 1563
CfoI GCGC 2 cut(s) 664, 859
Cfr13I GGNCC 3 cut(s) 113, 629, 793
CseI GACGC 3 cut(s) 305, 1272, 1298
Csp6I GTAC 6 cut(s) 83, 143, 224, 601, 815, 1407
CviQI GTAC 6 cut(s) 83, 143, 224, 601, 815, 1407
DdeI CTNAG 5 cut(s) 562, 1029, 1244, 1361, 1503
DinI GGCGCC 1 cut(s) 858
DpnI GATC 3 cut(s) 131, 248, 851
DpnII GATC 3 cut(s) 129, 246, 849
EaeI YGGCCR 1 cut(s) 125
Eam1104I CTCTTC 1 cut(s) 344
EarI CTCTTC 1 cut(s) 344
Eco105I TACGTA 1 cut(s) 687
Eco130I CCWWGG 4 cut(s) 122, 324, 716, 1479
Eco147I AGGCCT 1 cut(s) 1257
Eco24I GRGCYC 1 cut(s) 1006
Eco31I GGTCTC 1 cut(s) 718
Eco47I GGWCC 2 cut(s) 113, 793
Eco57I CTGAAG 3 cut(s) 325, 951, 970
Eco88I CYCGRG 1 cut(s) 1304
EcoNI CCTNNNNNAGG 1 cut(s) 1502
EcoO109I RGGNCCY 1 cut(s) 793
EcoRI GAATTC 1 cut(s) 278
EcoRII CCWGG 2 cut(s) 109, 631
EcoT14I CCWWGG 4 cut(s) 122, 324, 716, 1479
EcoT22I ATGCAT 1 cut(s) 694
EcoT38I GRGCYC 1 cut(s) 1006
EgeI GGCGCC 1 cut(s) 858
EheI GGCGCC 1 cut(s) 858
ErhI CCWWGG 4 cut(s) 122, 324, 716, 1479
Esp3I CGTCTC 1 cut(s) 661
FaqI GGGAC 1 cut(s) 1429
Fnu4HI GCNGC 4 cut(s) 549, 914, 1151, 1566
FokI GGATG 5 cut(s) 25, 150, 776, 1140, 1205
FriOI GRGCYC 1 cut(s) 1006
Fsp4HI GCNGC 4 cut(s) 549, 914, 1151, 1566
FspBI CTAG 2 cut(s) 230, 1443
GlaI GCGC 2 cut(s) 663, 858
GluI GCNGC 4 cut(s) 549, 914, 1151, 1566
GsuI CTGGAG 1 cut(s) 93
HaeII RGCGCY 1 cut(s) 860
HaeIII GGCC 3 cut(s) 127, 631, 1257
HapII CCGG 2 cut(s) 1147, 1577
HgaI GACGC 3 cut(s) 305, 1272, 1298
HhaI GCGC 2 cut(s) 664, 859
Hin1I GRCGYC 1 cut(s) 857
Hin6I GCGC 2 cut(s) 662, 857
HinP1I GCGC 2 cut(s) 662, 857
HincII GTYRAC 1 cut(s) 1334
HindII GTYRAC 1 cut(s) 1334
HinfI GANTC 5 cut(s) 4, 1074, 1094, 1139, 1296
HpaII CCGG 2 cut(s) 1147, 1577
HphI GGTGA 3 cut(s) 252, 326, 544
Hpy166II GTNNAC 4 cut(s) 143, 224, 1334, 1461
Hpy188I TCNGA 5 cut(s) 195, 706, 997, 1012, 1262
Hpy188III TCNNGA 6 cut(s) 283, 312, 435, 791, 839, 1091
Hpy8I GTNNAC 4 cut(s) 143, 224, 1334, 1461
Hpy99I CGWCG 1 cut(s) 299
HpyAV CCTTC 5 cut(s) 200, 396, 722, 994, 1380
HpyCH4III ACNGT 5 cut(s) 361, 444, 729, 814, 973
HpyCH4IV ACGT 2 cut(s) 654, 686
HpyF10VI GCNNNNNNNGC 5 cut(s) 305, 513, 1150, 1205, 1263
HpyF3I CTNAG 5 cut(s) 562, 1029, 1244, 1361, 1503
HpySE526I ACGT 2 cut(s) 654, 686
Hsp92I GRCGYC 1 cut(s) 857
HspAI GCGC 2 cut(s) 662, 857
KasI GGCGCC 1 cut(s) 856
Kzo9I GATC 3 cut(s) 129, 246, 849
LmnI GCTCC 4 cut(s) 1149, 1342, 1467, 1513
Lsp1109I GCAGC 4 cut(s) 560, 925, 1137, 1552
LweI GCATC 7 cut(s) 317, 754, 1023, 1162, 1186, 1315, 1422
MaeI CTAG 2 cut(s) 230, 1443
MaeII ACGT 2 cut(s) 654, 686
MaeIII GTNAC 1 cut(s) 367
MalI GATC 3 cut(s) 131, 248, 851
MboI GATC 3 cut(s) 129, 246, 849
MhlI GDGCHC 3 cut(s) 509, 833, 1006
MluCI AATT 5 cut(s) 267, 278, 543, 647, 774
Mly113I GGCGCC 1 cut(s) 857
MmeI TCCRAC 1 cut(s) 1535
Mph1103I ATGCAT 1 cut(s) 694
MseI TTAA 3 cut(s) 204, 426, 1316
MslI CAYNNNNRTG 6 cut(s) 175, 323, 687, 1317, 1427, 1542
MspI CCGG 2 cut(s) 1147, 1577
MspR9I CCNGG 2 cut(s) 111, 633
Mva1269I GAATGC 1 cut(s) 692
MvaI CCWGG 2 cut(s) 111, 633
MwoI GCNNNNNNNGC 5 cut(s) 305, 513, 1150, 1205, 1263
NarI GGCGCC 1 cut(s) 857
NcoI CCATGG 3 cut(s) 122, 324, 716
NdeII GATC 3 cut(s) 129, 246, 849
NlaIV GGNNCC 3 cut(s) 795, 858, 1509
NsiI ATGCAT 1 cut(s) 694
NspI RCATGY 5 cut(s) 222, 1084, 1474, 1541, 1547
PaeI GCATGC 2 cut(s) 1474, 1541
PceI AGGCCT 1 cut(s) 1257
PctI GAATGC 1 cut(s) 692
PfeI GAWTC 5 cut(s) 4, 1074, 1094, 1139, 1296
PflMI CCANNNNNTGG 1 cut(s) 1278
PfoI TCCNGGA 1 cut(s) 109
PkrI GCNGC 4 cut(s) 550, 915, 1152, 1567
PluTI GGCGCC 1 cut(s) 860
Ppu21I YACGTR 1 cut(s) 687
PpuMI RGGWCCY 1 cut(s) 793
Psp5II RGGWCCY 1 cut(s) 793
Psp6I CCWGG 2 cut(s) 109, 631
PspGI CCWGG 2 cut(s) 109, 631
PspN4I GGNNCC 3 cut(s) 795, 858, 1509
PspPI GGNCC 3 cut(s) 113, 629, 793
PspPPI RGGWCCY 1 cut(s) 793
RsaI GTAC 6 cut(s) 84, 144, 225, 602, 816, 1408
RsaNI GTAC 6 cut(s) 83, 143, 224, 601, 815, 1407
RseI CAYNNNNRTG 6 cut(s) 175, 323, 687, 1317, 1427, 1542
SaqAI TTAA 3 cut(s) 204, 426, 1316
SatI GCNGC 4 cut(s) 549, 914, 1151, 1566
Sau3AI GATC 3 cut(s) 129, 246, 849
Sau96I GGNCC 3 cut(s) 113, 629, 793
ScaI AGTACT 1 cut(s) 84
ScrFI CCNGG 2 cut(s) 111, 633
SduI GDGCHC 3 cut(s) 509, 833, 1006
SfaNI GCATC 7 cut(s) 317, 754, 1023, 1162, 1186, 1315, 1422
SfcI CTRYAG 4 cut(s) 496, 861, 959, 1200
SfoI GGCGCC 1 cut(s) 858
SinI GGWCC 2 cut(s) 113, 793
SmiMI CAYNNNNRTG 6 cut(s) 175, 323, 687, 1317, 1427, 1542
SnaBI TACGTA 1 cut(s) 687
SphI GCATGC 2 cut(s) 1474, 1541
Sse9I AATT 5 cut(s) 267, 278, 543, 647, 774
SseBI AGGCCT 1 cut(s) 1257
SsiI CCGC 1 cut(s) 473
SspDI GGCGCC 1 cut(s) 856
SspMI CTAG 2 cut(s) 230, 1443
StuI AGGCCT 1 cut(s) 1257
StyD4I CCNGG 2 cut(s) 109, 631
StyI CCWWGG 4 cut(s) 122, 324, 716, 1479
TaaI ACNGT 5 cut(s) 361, 444, 729, 814, 973
TaiI ACGT 2 cut(s) 657, 689
TaqI TCGA 5 cut(s) 453, 509, 879, 1077, 1299
TasI AATT 5 cut(s) 267, 278, 543, 647, 774
TatI WGTACW 1 cut(s) 82
TfiI GAWTC 5 cut(s) 4, 1074, 1094, 1139, 1296
Tru1I TTAA 3 cut(s) 204, 426, 1316
Tru9I TTAA 3 cut(s) 204, 426, 1316
TscAI CASTG 7 cut(s) 99, 214, 392, 509, 958, 1195, 1507
TseI GCWGC 4 cut(s) 548, 913, 1150, 1565
TspDTI ATGAA 6 cut(s) 230, 483, 877, 1207, 1357, 1362
TspRI CASTG 7 cut(s) 99, 214, 392, 509, 958, 1195, 1507
Van91I CCANNNNNTGG 1 cut(s) 1278
VpaK11BI GGWCC 2 cut(s) 113, 793
XagI CCTNNNNNAGG 1 cut(s) 1502
XapI RAATTY 1 cut(s) 278
XceI RCATGY 5 cut(s) 222, 1084, 1474, 1541, 1547
XcmI CCANNNNNNNNNTGG 2 cut(s) 174, 1336
XspI CTAG 2 cut(s) 230, 1443
ZrmI AGTACT 1 cut(s) 84
Zsp2I ATGCAT 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.