Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0001167

Physical Location & Seq

Genomic Coordinates Reverse (-)

17162473 .. 17168612

Gene Structure 6140 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG192300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGATTCCTGTTATTGCAGTATTACTTTTCTTTGCCTCATCCATCTTTTTGGGCTTTCTTATCCAAAAAACGAAGCGAGTAGTGCTCCTACCAGTGCCACCTCTCCCTCCAGGACCAAGCCCATGGCCGATCATTGGATGTGTACTAGCGATGTGGAGGAACAGACCAGCATACAGATGGATACATGACCTTCTGAAACAGCTTAACACTGATATTGCCTGCATACGACTAGGAAAAGTTCATGTGATCGCAGTCAAATCACCTGAAATTGCCAGAGAATTCTTGAAAAAACACGACGCCGTTTTCGCATCACGACCCATTACTATGGCTACTCACCTTTACAGTAGTGGATACTTGACAATGGGTGTTACACCTATGGGAGAACAGTGGAAGAAAATGAGAAGGGTTTTAATTGCAGATGTGTTTAACCAGTCCAGACTCCGGTGGCTACTCGATAAGAGAAACGATGAAGCGGACAATCTTGTGAAGTTTCTCTACAGTCACTGCTCGAACAGCGAGAATGGTTCGGTGGTGAATGTGAGAACTGCAGCCCAACATTACACAGCAAATGTGATGAGAAGAATGCTCTTCAACACGAGGTACTTTGGCAAAGGGAGAGAGGATGGAGGGCCAGGACTTGAAGAAGAATTACACGTCTCTGCGCTTTTCACATTGTCCTTGCATACGTATGCATTTTGTGTATCCGATTACCTTCCATGGTTGAGACCGTTTGACATAGGTGGGCATGAGAAAAGGGTCAAGGATGCTGTGAAAATTGTCAAGCAGTATCAGGACCCTATTATAGATGAGAGAGTACGAAAGTGGAGGTGCTCTAATCAGGAAAATAGGATCAAGGAGCCTGTAGAGGAGAGCTTGCTTGATGTTTTCATCTCACTCAAAGGTGTAGATGGGCAGCCTCTATTATCAGTTGAAGAAATCAAAGCACAACTCACTGAACTACAGCTTGCCACGGTGGATAATCCCTTCAATATAGTAGAGTGGGCTCTATCAGAAATGCTGAACCAACCTGAGATGCTTACAAAAGCACAAGAGGAACTAAATAGGGTAGTGGGAATCGACATGCTTGTTCAAGAATCTCATATCCCTCATCTCCTTTACATAAGGGCTTGTGCAAGAGAATCGCTCAGGCTGCATCCAGTTGCACCATTCAATCTTCCCCATGTTTCCACTGCTGATGCTATAGTAGCAGGCTACTTCATCCCAAAGGGCAGTAGTGTTATTCTAAGTCGTTTAGGCCTCGGACGCAACCCCAAAGTCTGGGAAAACCCGTTGAGATTCAACCCCGAGCGTCATTTAAGTGGAGATGCCAGTCAACAGGTGGAGCTGGAAGAACAGGAGCTGAGGTTCATTTCATTTGCTACTGGAAGGAGAGGTTGCATGGGTAGTACGCTTGGGACTACCATAACTGTGATGCTCTTTGCTAGGCTTCTTCAAGGGTTTACATGGAGCATGCCACCCAAGGTGGATAAGATTGACCTCACTGAGGCTCCAACCCTTTTCAAGCTCAATCCTTTGCTTGCACATGCTAAACCTCGCTTGCCTGCTGCTATGTACCCGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006082 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009683 GO:0009684 GO:0009850 GO:0009851 GO:0009987 GO:0010817 GO:0016020 GO:0016053 GO:0016137 GO:0016138 GO:0016491 GO:0018130 GO:0019438 GO:0019748 GO:0019752 GO:0019756 GO:0032787 GO:0034641 GO:0034754 GO:0042341 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043207 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044550 GO:0046394 GO:0046483 GO:0050896 GO:0050898 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0080028 GO:0098542 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00460 ko00966 ko01110 ko01210 map00460 map00966 map01110 map01210

Pfam Domains

Protein Families

p450

Protein Analysis

527

Amino Acids

59.78

Weight (kDa)

9.15

Isoelectric Point (pI)

46.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	36 - 509	3e-77	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05260 AT5G05260 AT5G35917 AT5G35920
fragaria_vesca	FvH4_3g09210
malus_domestica	MD10G1235800.v1.1 MD10G1235900.v1.1
prunus_persica	Prupe.7G129100_v2.0.a1 Prupe.7G129500_v2.0.a1
pyrus_communis	pycom10g19740
rosa_chinensis	RchiOBHm_Chr1g0327171 RchiOBHm_Chr3g0470321 RchiOBHm_Chr3g0470341 RchiOBHm_Chr3g0472221 RchiOBHm_Chr3g0472231 RchiOBHm_Chr7g0218701
rosa_laevigata	RLG00000024276 RLG00000030037
rosa_multiflora	Rmu_sc0000449.1_g000025 Rmu_sc0000449.1_g000027 Rmu_sc0001093.1_g000013 Rmu_sc0001093.1_g000015 Rmu_sc0001279.1_g000009 Rmu_sc0002532.1_g000045 Rmu_sc0002532.1_g000046
rosa_roxburghii	Rroxscaffold_4G00323120 Rroxscaffold_4G00323180 Rroxscaffold_5G00348690 Rroxscaffold_5G00348710 Rroxscaffold_6G00410930
rosa_rugosa	Rorug04G0047400
rosa_samantha	Rh1AG081400 Rh1BG064600 Rh1CG079600 Rh1DG085800 Rh3AG158100 Rh3AG175300 Rh3BG102500 Rh3BG182400 Rh3BG182600 Rh3BG200700 Rh3BG200900 Rh3CG173100 Rh3CG173300 Rh3CG192100 Rh3CG199300 Rh3DG103500 Rh3DG174100 Rh3DG192300 Rh4BG117000 Rh4BG117100 Rh7AG321800 Rh7CG338400
rosa_wichuraiana	Rw1G006430 Rw3G008370 Rw3G015020 Rw3G016590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1278
AciI	CCGC	1 cut(s)	473
AclWI	GGATC	1 cut(s)	857
AcoI	YGGCCR	1 cut(s)	125
AcsI	RAATTY	1 cut(s)	278
AcyI	GRCGYC	1 cut(s)	297
AfaI	GTAC	5 cut(s)	144, 602, 816, 1408, 1574
AfiI	CCNNNNNNNGG	4 cut(s)	134, 441, 1278, 1504
AflIII	ACRYGT	1 cut(s)	652
AjiI	CACGTC	1 cut(s)	655
AjnI	CCWGG	2 cut(s)	109, 631
AloI	GAACNNNNNNTCC	2 cut(s)	1349, 1381
AluBI	AGCT	6 cut(s)	202, 873, 964, 1345, 1360, 1525
AluI	AGCT	6 cut(s)	202, 873, 964, 1345, 1360, 1525
Alw21I	GWGCWC	2 cut(s)	87, 833
Alw26I	GTCTC	2 cut(s)	661, 718
AlwI	GGATC	1 cut(s)	857
AlwNI	CAGNNNCTG	2 cut(s)	504, 1360
Ama87I	CYCGRG	1 cut(s)	1304
AoxI	GGCC	3 cut(s)	125, 629, 1255
ApeKI	GCWGC	4 cut(s)	548, 913, 1150, 1565
ApoI	RAATTY	1 cut(s)	278
ArsI	GACNNNNNNTTYG	2 cut(s)	287, 319
AspLEI	GCGC	1 cut(s)	664
AspS9I	GGNCC	3 cut(s)	113, 629, 793
AsuC2I	CCSGG	1 cut(s)	1577
AsuHPI	GGTGA	3 cut(s)	252, 326, 544
AvaI	CYCGRG	1 cut(s)	1304
AvaII	GGWCC	2 cut(s)	113, 793
BanII	GRGCYC	1 cut(s)	1006
BarI	GAAGNNNNNNTAC	4 cut(s)	479, 511, 633, 665
BauI	CACGAG	1 cut(s)	595
Bbv12I	GWGCWC	2 cut(s)	87, 833
BbvCI	CCTCAGC	1 cut(s)	1361
BbvI	GCAGC	4 cut(s)	560, 925, 1137, 1552
BccI	CCATC	4 cut(s)	50, 171, 617, 902
BceAI	ACGGC	1 cut(s)	284
BcgI	CGANNNNNNTGC	2 cut(s)	1122, 1156
BciT130I	CCWGG	2 cut(s)	111, 633
BciVI	GTATCC	3 cut(s)	174, 344, 712
BcnI	CCSGG	1 cut(s)	1577
BcoDI	GTCTC	2 cut(s)	661, 718
BfaI	CTAG	3 cut(s)	146, 230, 1443
BfmI	CTRYAG	5 cut(s)	496, 546, 861, 959, 1200
BfuI	GTATCC	3 cut(s)	174, 344, 712
BisI	GCNGC	4 cut(s)	549, 914, 1151, 1566
BlsI	GCNGC	4 cut(s)	550, 915, 1152, 1567
Bme1390I	CCNGG	3 cut(s)	111, 633, 1577
Bme18I	GGWCC	2 cut(s)	113, 793
BmeT110I	CYCGRG	1 cut(s)	1304
BmgBI	CACGTC	1 cut(s)	655
BmgT120I	GGNCC	3 cut(s)	113, 629, 793
BmiI	GGNNCC	3 cut(s)	795, 858, 1509
BmrFI	CCNGG	3 cut(s)	111, 633, 1577
BmsI	GCATC	7 cut(s)	317, 754, 1023, 1162, 1186, 1315, 1422
BplI	GAGNNNNNCTC	4 cut(s)	69, 101, 1128, 1160
BpmI	CTGGAG	1 cut(s)	93
Bpu10I	CCTNAGC	2 cut(s)	1145, 1361
BpuMI	CCSGG	1 cut(s)	1577
BsaAI	YACGTR	1 cut(s)	687
BsaHI	GRCGYC	1 cut(s)	297
BsaI	GGTCTC	1 cut(s)	718
BsaJI	CCNNGG	5 cut(s)	122, 716, 969, 1258, 1479
BsaWI	WCCGGW	1 cut(s)	441
BsaXI	ACNNNNNCTCC	4 cut(s)	1349, 1379, 1492, 1522
Bsc4I	CCNNNNNNNGG	4 cut(s)	134, 441, 1278, 1504
Bse1I	ACTGG	5 cut(s)	92, 430, 1157, 1329, 1387
BseBI	CCWGG	2 cut(s)	111, 633
BseDI	CCNNGG	5 cut(s)	122, 716, 969, 1258, 1479
BseGI	GGATG	6 cut(s)	38, 143, 628, 769, 1153, 1218
BseLI	CCNNNNNNNGG	4 cut(s)	134, 441, 1278, 1504
BseMII	CTCAG	4 cut(s)	1020, 1159, 1352, 1494
BseNI	ACTGG	5 cut(s)	92, 430, 1157, 1329, 1387
BseRI	GAGGAG	1 cut(s)	881
BseXI	GCAGC	4 cut(s)	560, 925, 1137, 1552
BshFI	GGCC	3 cut(s)	127, 631, 1257
BsiHKAI	GWGCWC	2 cut(s)	87, 833
BsiHKCI	CYCGRG	1 cut(s)	1304
BsiSI	CCGG	2 cut(s)	442, 1577
BslFI	GGGAC	1 cut(s)	1429
BslI	CCNNNNNNNGG	4 cut(s)	134, 441, 1278, 1504
BsmAI	GTCTC	2 cut(s)	661, 718
BsmBI	CGTCTC	1 cut(s)	661
BsmFI	GGGAC	1 cut(s)	1429
BsmI	GAATGC	1 cut(s)	588
BsnI	GGCC	3 cut(s)	127, 631, 1257
Bso31I	GGTCTC	1 cut(s)	718
BsoBI	CYCGRG	1 cut(s)	1304
Bsp1286I	GDGCHC	3 cut(s)	87, 833, 1006
Bsp143I	GATC	3 cut(s)	129, 246, 849
Bsp19I	CCATGG	2 cut(s)	122, 716
BspACI	CCGC	1 cut(s)	473
BspANI	GGCC	3 cut(s)	127, 631, 1257
BspCNI	CTCAG	4 cut(s)	1021, 1158, 1353, 1495
BspLI	GGNNCC	3 cut(s)	795, 858, 1509
BspMAI	CTGCAG	1 cut(s)	550
BspPI	GGATC	1 cut(s)	857
BspQI	GCTCTTC	1 cut(s)	593
BspTNI	GGTCTC	1 cut(s)	718
BsrI	ACTGG	5 cut(s)	92, 430, 1157, 1329, 1387
BssECI	CCNNGG	5 cut(s)	122, 716, 969, 1258, 1479
BssMI	GATC	3 cut(s)	129, 246, 849
BssNI	GRCGYC	1 cut(s)	297
BssSI	CACGAG	1 cut(s)	595
BssT1I	CCWWGG	3 cut(s)	122, 716, 1479
Bst2BI	CACGAG	1 cut(s)	595
Bst2UI	CCWGG	2 cut(s)	111, 633
Bst4CI	ACNGT	6 cut(s)	344, 387, 500, 729, 973, 1429
Bst6I	CTCTTC	1 cut(s)	593
BstACI	GRCGYC	1 cut(s)	297
BstBAI	YACGTR	1 cut(s)	687
BstC8I	GCNNGC	8 cut(s)	220, 875, 966, 1210, 1472, 1539, 1559, 1563
BstDEI	CTNAG	5 cut(s)	1029, 1145, 1244, 1361, 1503
BstDSI	CCRYGG	3 cut(s)	122, 716, 969
BstENI	CCTNNNNNAGG	1 cut(s)	1502
BstF5I	GGATG	6 cut(s)	38, 143, 628, 769, 1153, 1218
BstHHI	GCGC	1 cut(s)	664
BstKTI	GATC	3 cut(s)	132, 249, 852
BstMAI	GTCTC	2 cut(s)	661, 718
BstMBI	GATC	3 cut(s)	129, 246, 849
BstMWI	GCNNNNNNNGC	6 cut(s)	82, 305, 513, 1150, 1205, 1263
BstNI	CCWGG	2 cut(s)	111, 633
BstNSI	RCATGY	3 cut(s)	1084, 1474, 1547
BstSCI	CCNGG	3 cut(s)	109, 631, 1575
BstSFI	CTRYAG	5 cut(s)	496, 546, 861, 959, 1200
BstSNI	TACGTA	1 cut(s)	687
BstV1I	GCAGC	4 cut(s)	560, 925, 1137, 1552
BstXI	CCANNNNNNTGG	3 cut(s)	49, 123, 325
BsuI	GTATCC	3 cut(s)	174, 344, 712
BsuRI	GGCC	3 cut(s)	127, 631, 1257
BtgI	CCRYGG	3 cut(s)	122, 716, 969
BtgZI	GCGATG	1 cut(s)	164
BtrI	CACGTC	1 cut(s)	655
BtsCI	GGATG	6 cut(s)	38, 143, 628, 769, 1153, 1218
BtsI	GCAGTG	2 cut(s)	502, 1188
BtsIMutI	CAGTG	7 cut(s)	99, 207, 392, 502, 951, 1188, 1500
Cac8I	GCNNGC	8 cut(s)	220, 875, 966, 1210, 1472, 1539, 1559, 1563
CaiI	CAGNNNCTG	2 cut(s)	504, 1360
CfoI	GCGC	1 cut(s)	664
Cfr13I	GGNCC	3 cut(s)	113, 629, 793
CseI	GACGC	3 cut(s)	305, 1272, 1298
Csp6I	GTAC	5 cut(s)	143, 601, 815, 1407, 1573
CviQI	GTAC	5 cut(s)	143, 601, 815, 1407, 1573
DdeI	CTNAG	5 cut(s)	1029, 1145, 1244, 1361, 1503
DpnI	GATC	3 cut(s)	131, 248, 851
DpnII	GATC	3 cut(s)	129, 246, 849
EaeI	YGGCCR	1 cut(s)	125
Eam1104I	CTCTTC	1 cut(s)	593
EarI	CTCTTC	1 cut(s)	593
Eco105I	TACGTA	1 cut(s)	687
Eco130I	CCWWGG	3 cut(s)	122, 716, 1479
Eco147I	AGGCCT	1 cut(s)	1257
Eco24I	GRGCYC	1 cut(s)	1006
Eco31I	GGTCTC	1 cut(s)	718
Eco47I	GGWCC	2 cut(s)	113, 793
Eco88I	CYCGRG	1 cut(s)	1304
EcoNI	CCTNNNNNAGG	1 cut(s)	1502
EcoO109I	RGGNCCY	1 cut(s)	793
EcoRI	GAATTC	1 cut(s)	278
EcoRII	CCWGG	2 cut(s)	109, 631
EcoT14I	CCWWGG	3 cut(s)	122, 716, 1479
EcoT22I	ATGCAT	1 cut(s)	694
EcoT38I	GRGCYC	1 cut(s)	1006
ErhI	CCWWGG	3 cut(s)	122, 716, 1479
Esp3I	CGTCTC	1 cut(s)	661
FaqI	GGGAC	1 cut(s)	1429
Fnu4HI	GCNGC	4 cut(s)	549, 914, 1151, 1566
FokI	GGATG	6 cut(s)	25, 150, 635, 776, 1140, 1205
FriOI	GRGCYC	1 cut(s)	1006
Fsp4HI	GCNGC	4 cut(s)	549, 914, 1151, 1566
FspBI	CTAG	3 cut(s)	146, 230, 1443
GlaI	GCGC	1 cut(s)	663
GluI	GCNGC	4 cut(s)	549, 914, 1151, 1566
GsuI	CTGGAG	1 cut(s)	93
HaeIII	GGCC	3 cut(s)	127, 631, 1257
HapII	CCGG	2 cut(s)	442, 1577
HgaI	GACGC	3 cut(s)	305, 1272, 1298
HhaI	GCGC	1 cut(s)	664
Hin1I	GRCGYC	1 cut(s)	297
Hin6I	GCGC	1 cut(s)	662
HinP1I	GCGC	1 cut(s)	662
HincII	GTYRAC	1 cut(s)	1334
HindII	GTYRAC	1 cut(s)	1334
HinfI	GANTC	6 cut(s)	4, 438, 1074, 1094, 1139, 1296
HpaII	CCGG	2 cut(s)	442, 1577
HphI	GGTGA	3 cut(s)	252, 326, 544
Hpy166II	GTNNAC	3 cut(s)	143, 1334, 1461
Hpy188I	TCNGA	4 cut(s)	195, 706, 1012, 1262
Hpy188III	TCNNGA	6 cut(s)	283, 312, 435, 791, 839, 1091
Hpy8I	GTNNAC	3 cut(s)	143, 1334, 1461
Hpy99I	CGWCG	1 cut(s)	299
HpyAV	CCTTC	5 cut(s)	200, 396, 722, 994, 1380
HpyCH4III	ACNGT	6 cut(s)	344, 387, 500, 729, 973, 1429
HpyCH4IV	ACGT	2 cut(s)	654, 686
HpyF10VI	GCNNNNNNNGC	6 cut(s)	82, 305, 513, 1150, 1205, 1263
HpyF3I	CTNAG	5 cut(s)	1029, 1145, 1244, 1361, 1503
HpySE526I	ACGT	2 cut(s)	654, 686
Hsp92I	GRCGYC	1 cut(s)	297
HspAI	GCGC	1 cut(s)	662
Kzo9I	GATC	3 cut(s)	129, 246, 849
LguI	GCTCTTC	1 cut(s)	593
LmnI	GCTCC	6 cut(s)	90, 856, 1342, 1357, 1467, 1513
Lsp1109I	GCAGC	4 cut(s)	560, 925, 1137, 1552
LweI	GCATC	7 cut(s)	317, 754, 1023, 1162, 1186, 1315, 1422
MaeI	CTAG	3 cut(s)	146, 230, 1443
MaeII	ACGT	2 cut(s)	654, 686
MaeIII	GTNAC	2 cut(s)	367, 500
MalI	GATC	3 cut(s)	131, 248, 851
MboI	GATC	3 cut(s)	129, 246, 849
MboII	GAAGA	9 cut(s)	403, 580, 591, 653, 656, 944, 1166, 1361, 1442
MhlI	GDGCHC	3 cut(s)	87, 833, 1006
MluCI	AATT	5 cut(s)	267, 278, 411, 647, 774
MlyI	GAGTC	1 cut(s)	432
MmeI	TCCRAC	1 cut(s)	1535
Mph1103I	ATGCAT	1 cut(s)	694
MseI	TTAA	4 cut(s)	204, 410, 426, 1316
MslI	CAYNNNNRTG	5 cut(s)	175, 323, 687, 1317, 1427
MspI	CCGG	2 cut(s)	442, 1577
MspR9I	CCNGG	3 cut(s)	111, 633, 1577
Mva1269I	GAATGC	1 cut(s)	588
MvaI	CCWGG	2 cut(s)	111, 633
MwoI	GCNNNNNNNGC	6 cut(s)	82, 305, 513, 1150, 1205, 1263
NciI	CCSGG	1 cut(s)	1577
NcoI	CCATGG	2 cut(s)	122, 716
NdeII	GATC	3 cut(s)	129, 246, 849
NlaIV	GGNNCC	3 cut(s)	795, 858, 1509
NmuCI	GTSAC	1 cut(s)	500
NsiI	ATGCAT	1 cut(s)	694
NspI	RCATGY	3 cut(s)	1084, 1474, 1547
PaeI	GCATGC	1 cut(s)	1474
PceI	AGGCCT	1 cut(s)	1257
PciSI	GCTCTTC	1 cut(s)	593
PctI	GAATGC	1 cut(s)	588
PfeI	GAWTC	5 cut(s)	4, 1074, 1094, 1139, 1296
PflMI	CCANNNNNTGG	1 cut(s)	1278
PfoI	TCCNGGA	1 cut(s)	109
PkrI	GCNGC	4 cut(s)	550, 915, 1152, 1567
PleI	GAGTC	1 cut(s)	432
PpsI	GAGTC	1 cut(s)	432
Ppu21I	YACGTR	1 cut(s)	687
PpuMI	RGGWCCY	1 cut(s)	793
Psp5II	RGGWCCY	1 cut(s)	793
Psp6I	CCWGG	2 cut(s)	109, 631
PspGI	CCWGG	2 cut(s)	109, 631
PspN4I	GGNNCC	3 cut(s)	795, 858, 1509
PspPI	GGNCC	3 cut(s)	113, 629, 793
PspPPI	RGGWCCY	1 cut(s)	793
PstI	CTGCAG	1 cut(s)	550
PstNI	CAGNNNCTG	2 cut(s)	504, 1360
RsaI	GTAC	5 cut(s)	144, 602, 816, 1408, 1574
RsaNI	GTAC	5 cut(s)	143, 601, 815, 1407, 1573
RseI	CAYNNNNRTG	5 cut(s)	175, 323, 687, 1317, 1427
SapI	GCTCTTC	1 cut(s)	593
SaqAI	TTAA	4 cut(s)	204, 410, 426, 1316
SatI	GCNGC	4 cut(s)	549, 914, 1151, 1566
Sau3AI	GATC	3 cut(s)	129, 246, 849
Sau96I	GGNCC	3 cut(s)	113, 629, 793
SchI	GAGTC	1 cut(s)	432
ScrFI	CCNGG	3 cut(s)	111, 633, 1577
SduI	GDGCHC	3 cut(s)	87, 833, 1006
SfaNI	GCATC	7 cut(s)	317, 754, 1023, 1162, 1186, 1315, 1422
SfcI	CTRYAG	5 cut(s)	496, 546, 861, 959, 1200
SinI	GGWCC	2 cut(s)	113, 793
SmiMI	CAYNNNNRTG	5 cut(s)	175, 323, 687, 1317, 1427
SnaBI	TACGTA	1 cut(s)	687
SphI	GCATGC	1 cut(s)	1474
Sse9I	AATT	5 cut(s)	267, 278, 411, 647, 774
SseBI	AGGCCT	1 cut(s)	1257
SsiI	CCGC	1 cut(s)	473
SspMI	CTAG	3 cut(s)	146, 230, 1443
StuI	AGGCCT	1 cut(s)	1257
StyD4I	CCNGG	3 cut(s)	109, 631, 1575
StyI	CCWWGG	3 cut(s)	122, 716, 1479
TaaI	ACNGT	6 cut(s)	344, 387, 500, 729, 973, 1429
TaiI	ACGT	2 cut(s)	657, 689
TaqI	TCGA	3 cut(s)	453, 509, 1077
TasI	AATT	5 cut(s)	267, 278, 411, 647, 774
TatI	WGTACW	1 cut(s)	142
TfiI	GAWTC	5 cut(s)	4, 1074, 1094, 1139, 1296
Tru1I	TTAA	4 cut(s)	204, 410, 426, 1316
Tru9I	TTAA	4 cut(s)	204, 410, 426, 1316
TscAI	CASTG	7 cut(s)	99, 214, 392, 509, 958, 1195, 1507
TseFI	GTSAC	1 cut(s)	500
TseI	GCWGC	4 cut(s)	548, 913, 1150, 1565
Tsp45I	GTSAC	1 cut(s)	500
TspDTI	ATGAA	6 cut(s)	230, 483, 877, 1207, 1357, 1362
TspRI	CASTG	7 cut(s)	99, 214, 392, 509, 958, 1195, 1507
Van91I	CCANNNNNTGG	1 cut(s)	1278
VpaK11BI	GGWCC	2 cut(s)	113, 793
XagI	CCTNNNNNAGG	1 cut(s)	1502
XapI	RAATTY	1 cut(s)	278
XceI	RCATGY	3 cut(s)	1084, 1474, 1547
XcmI	CCANNNNNNNNNTGG	2 cut(s)	174, 1336
XspI	CTAG	3 cut(s)	146, 230, 1443
Zsp2I	ATGCAT	1 cut(s)	694

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.