Rw3G015020

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
15378452 .. 15385309
6858 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G015020.1

Sequence Viewer

Length: 1587 bp
ATGATTCCTATTATTGCAGTATTGCTTTTCTTTGCCTCATCCATCTTTTTAGGCTTTCTTATCCAAAAAACAAAGCGAGTAGTACTCCCACCTGTGCCACCTCTCCCTCTAGGACCCAGCCCATGGCTGATCATCGGATGTGTACCAGAGATGTGGAGGAACAGACCAGCATACAGATGGATACATGACCTTCTAAAACAGCTCAACACTGATATTGCATGTGTACGACTAGGAAAAGTTCATGTGATAGCAATCAAATCACCTGAAATTGCTAGAGAATTCTTGAAAAAACACGACGCTGTTTTCGCATCACGACCCACTACTATGGCTACTCACTACTTAAGTAATGGGTACTTGACAGCAGCTGTTGCACCTTTGGGAGAGCAGTGGAAGAAAATGAGAAGAGTTTTGGTTGCCGACGTGTTGAATCAGTCCAGACTCCGGTGGCTACTCGATAAGAGAAACGATGAAGCGGACAATCTTGTGAAGTTTCTCTACAGTCAGTGCTCGAACAGTGAGAATGGTTCGGTGGTGAATATGAGAAATGTAGCCCAACATTACTCAGCGAATGTGATAAGAAGGATGATCTTCAACACGAGGTACTTTGGCAATGGAAGGGAGGATGGAGGACCAGGACTTGAAGAAGAAAGACATGTCTCTGCGCTTTTCACAATACTCTTGCATCTTAATGTCTTCTATGTATCCGATTACCTTCCATGGCTGAGACCGTTTGACATAGGTGGCCATGAGAAAAAGATGAGGGATGCTTTGAAAATTATCAAGCAATATGAGGACCCTATTATAGATGAGAGAGTACGAAAGTGGAGGTGCTCTAATCAGGAAAATTGGATCAAGGAGCCTGTAGAGGAGAACTTGCTCGATGTTTTCATCTCTCTCAAAGGCGCAGATGGGCAGCCTTTATTATCAACTGAAGAAATCAAAGCACAAATCACCGAACTACAGGTTGCCACGGTGGATAATCCCTCCAATATAGCAGAGTGGGCTCTATCAGAAATGCTGAATTACCAACCTGAGATGCTTACAAAAGCACAAGAGGAACTAAATAGGATAGTGGGAATTGACATGCTTGTTCAAGAATCTCATATCCCGCATCTCCCTTACAAAAGGGCTTGTGCAAGAGAATCGCTCAGGCTGCATCCAGTTGCACCATTCAATGTTCCCCATTTTTCCACTGCTGATGCTATAGTAGCAGGCTACTTCATCCCAAAGGGCAGTAGTGTTCTTCTAAGTCGTTTAGGCCTCGGACGCAACCCCAAAGTCTGGGAAAACCCGTTGAGATTCGATCCCGAGCGTCATCTAAGTGGAGATGCCAGTCAACAAGTAGAGCTGGAAGAACGTGATCTGAGGTTCATTTCATTTACTACTGGAAGGAGAGGTTGCATTGGTGGTACGCTTGGGACTACCATAACTGTGATGCTCCTTGCTAGGCTTCTTCAAGGGTTTACATGGAGCATGCCACCCAAGGTGGATAAGATTGACCTCACTGAGGCTCCAACCCTTTTCAAGCTCAATCCATTGCATGCACATGCTAAACCTCGCTTGCCTGCTGCTATGTACCCGATTTAG

Protein Analysis

528

Amino Acids

60.07

Weight (kDa)

9.03

Isoelectric Point (pI)

48.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 510 1.5e-76 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 123, 1281
AciI CCGC 2 cut(s) 473, 1109
AclWI GGATC 2 cut(s) 857, 1298
AcoI YGGCCR 1 cut(s) 742
AcsI RAATTY 1 cut(s) 278
AcuI CTGAAG 1 cut(s) 951
AfaI GTAC 8 cut(s) 84, 144, 225, 353, 602, 816, 1411, 1577
AfiI CCNNNNNNNGG 4 cut(s) 123, 441, 1281, 1507
AflII CTTAAG 1 cut(s) 340
AflIII ACRYGT 2 cut(s) 420, 652
AgsI TTSAA 9 cut(s) 286, 427, 592, 641, 772, 1094, 1174, 1457, 1525
AjiI CACGTC 1 cut(s) 421
AjnI CCWGG 1 cut(s) 631
AluBI AGCT 4 cut(s) 202, 365, 1348, 1528
AluI AGCT 4 cut(s) 202, 365, 1348, 1528
Alw21I GWGCWC 2 cut(s) 509, 833
Alw26I GTCTC 2 cut(s) 661, 718
AlwI GGATC 2 cut(s) 857, 1298
AlwNI CAGNNNCTG 1 cut(s) 365
Ama87I CYCGRG 1 cut(s) 1307
AoxI GGCC 2 cut(s) 742, 1258
ApeKI GCWGC 4 cut(s) 362, 913, 1153, 1568
ApoI RAATTY 1 cut(s) 278
ArsI GACNNNNNNTTYG 2 cut(s) 287, 319
AspLEI GCGC 2 cut(s) 664, 905
AspS9I GGNCC 3 cut(s) 113, 629, 793
AsuHPI GGTGA 3 cut(s) 252, 544, 943
AvaI CYCGRG 1 cut(s) 1307
AvaII GGWCC 3 cut(s) 113, 629, 793
BalI TGGCCA 1 cut(s) 744
BanII GRGCYC 1 cut(s) 1006
BarI GAAGNNNNNNTAC 2 cut(s) 479, 511
BauI CACGAG 1 cut(s) 595
BbsI GAAGAC 1 cut(s) 685
Bbv12I GWGCWC 2 cut(s) 509, 833
BbvI GCAGC 4 cut(s) 374, 925, 1140, 1555
BccI CCATC 4 cut(s) 50, 171, 617, 902
BcgI CGANNNNNNTGC 2 cut(s) 1125, 1159
BciT130I CCWGG 1 cut(s) 633
BciVI GTATCC 2 cut(s) 174, 712
BclI TGATCA 1 cut(s) 129
BcoDI GTCTC 2 cut(s) 661, 718
BfaI CTAG 4 cut(s) 110, 230, 273, 1446
BfmI CTRYAG 4 cut(s) 496, 861, 959, 1203
BfrI CTTAAG 1 cut(s) 340
BfuI GTATCC 2 cut(s) 174, 712
BisI GCNGC 4 cut(s) 363, 914, 1154, 1569
BlsI GCNGC 4 cut(s) 364, 915, 1155, 1570
BmcAI AGTACT 1 cut(s) 84
Bme1390I CCNGG 1 cut(s) 633
Bme18I GGWCC 3 cut(s) 113, 629, 793
BmeT110I CYCGRG 1 cut(s) 1307
BmgBI CACGTC 1 cut(s) 421
BmgT120I GGNCC 3 cut(s) 113, 629, 793
BmiI GGNNCC 4 cut(s) 115, 795, 858, 1512
BmrFI CCNGG 1 cut(s) 633
BmsI GCATC 9 cut(s) 317, 691, 754, 1026, 1120, 1165, 1189, 1318, 1425
BpiI GAAGAC 1 cut(s) 685
BplI GAGNNNNNCTC 4 cut(s) 69, 101, 1131, 1163
Bpu10I CCTNAGC 1 cut(s) 1148
BsaBI GATNNNNATC 1 cut(s) 251
BsaI GGTCTC 1 cut(s) 718
BsaJI CCNNGG 5 cut(s) 122, 716, 969, 1261, 1482
BsaWI WCCGGW 1 cut(s) 441
BsaXI ACNNNNNCTCC 2 cut(s) 1495, 1525
Bsc4I CCNNNNNNNGG 4 cut(s) 123, 441, 1281, 1507
Bse1I ACTGG 3 cut(s) 1160, 1332, 1390
Bse3DI GCAATG 2 cut(s) 616, 1535
Bse8I GATNNNNATC 1 cut(s) 251
BseBI CCWGG 1 cut(s) 633
BseDI CCNNGG 5 cut(s) 122, 716, 969, 1261, 1482
BseGI GGATG 7 cut(s) 38, 143, 588, 628, 769, 1156, 1221
BseJI GATNNNNATC 1 cut(s) 251
BseLI CCNNNNNNNGG 4 cut(s) 123, 441, 1281, 1507
BseMI GCAATG 2 cut(s) 616, 1535
BseMII CTCAG 6 cut(s) 576, 713, 1023, 1162, 1355, 1497
BseNI ACTGG 3 cut(s) 1160, 1332, 1390
BseRI GAGGAG 1 cut(s) 881
BseXI GCAGC 4 cut(s) 374, 925, 1140, 1555
BseYI CCCAGC 1 cut(s) 116
BshFI GGCC 2 cut(s) 744, 1260
BsiHKAI GWGCWC 2 cut(s) 509, 833
BsiHKCI CYCGRG 1 cut(s) 1307
BsiSI CCGG 1 cut(s) 442
BslFI GGGAC 1 cut(s) 1432
BslI CCNNNNNNNGG 4 cut(s) 123, 441, 1281, 1507
BsmAI GTCTC 2 cut(s) 661, 718
BsmFI GGGAC 1 cut(s) 1432
BsnI GGCC 2 cut(s) 744, 1260
Bso31I GGTCTC 1 cut(s) 718
BsoBI CYCGRG 1 cut(s) 1307
Bsp1286I GDGCHC 3 cut(s) 509, 833, 1006
Bsp143I GATC 5 cut(s) 129, 585, 849, 1303, 1360
Bsp19I CCATGG 2 cut(s) 122, 716
BspACI CCGC 2 cut(s) 473, 1109
BspANI GGCC 2 cut(s) 744, 1260
BspCNI CTCAG 6 cut(s) 575, 714, 1024, 1161, 1356, 1498
BspLI GGNNCC 4 cut(s) 115, 795, 858, 1512
BspPI GGATC 2 cut(s) 857, 1298
BspTI CTTAAG 1 cut(s) 340
BspTNI GGTCTC 1 cut(s) 718
BsrDI GCAATG 2 cut(s) 616, 1535
BsrI ACTGG 3 cut(s) 1160, 1332, 1390
BssECI CCNNGG 5 cut(s) 122, 716, 969, 1261, 1482
BssMI GATC 5 cut(s) 129, 585, 849, 1303, 1360
BssSI CACGAG 1 cut(s) 595
BssT1I CCWWGG 3 cut(s) 122, 716, 1482
Bst2BI CACGAG 1 cut(s) 595
Bst2UI CCWGG 1 cut(s) 633
Bst4CI ACNGT 5 cut(s) 500, 515, 729, 973, 1432
Bst6I CTCTTC 1 cut(s) 397
BstAFI CTTAAG 1 cut(s) 340
BstAPI GCANNNNNTGC 1 cut(s) 368
BstC8I GCNNGC 5 cut(s) 1213, 1475, 1542, 1562, 1566
BstDEI CTNAG 8 cut(s) 562, 722, 1032, 1148, 1247, 1319, 1364, 1506
BstDSI CCRYGG 3 cut(s) 122, 716, 969
BstENI CCTNNNNNAGG 1 cut(s) 1505
BstF5I GGATG 7 cut(s) 38, 143, 588, 628, 769, 1156, 1221
BstHHI GCGC 2 cut(s) 664, 905
BstKTI GATC 5 cut(s) 132, 588, 852, 1306, 1363
BstMAI GTCTC 2 cut(s) 661, 718
BstMBI GATC 5 cut(s) 129, 585, 849, 1303, 1360
BstMWI GCNNNNNNNGC 6 cut(s) 305, 368, 1001, 1153, 1208, 1266
BstNI CCWGG 1 cut(s) 633
BstNSI RCATGY 6 cut(s) 222, 656, 1087, 1477, 1544, 1550
BstSCI CCNGG 1 cut(s) 631
BstSFI CTRYAG 4 cut(s) 496, 861, 959, 1203
BstV1I GCAGC 4 cut(s) 374, 925, 1140, 1555
BstV2I GAAGAC 1 cut(s) 685
BstXI CCANNNNNNTGG 2 cut(s) 153, 325
BsuI GTATCC 2 cut(s) 174, 712
BsuRI GGCC 2 cut(s) 744, 1260
BtgI CCRYGG 3 cut(s) 122, 716, 969
BtrI CACGTC 1 cut(s) 421
BtsCI GGATG 7 cut(s) 38, 143, 588, 628, 769, 1156, 1221
BtsI GCAGTG 2 cut(s) 392, 1191
BtsIMutI CAGTG 6 cut(s) 207, 392, 509, 520, 1191, 1503
Cac8I GCNNGC 5 cut(s) 1213, 1475, 1542, 1562, 1566
CaiI CAGNNNCTG 1 cut(s) 365
CfoI GCGC 2 cut(s) 664, 905
Cfr13I GGNCC 3 cut(s) 113, 629, 793
CseI GACGC 3 cut(s) 305, 1275, 1301
Csp6I GTAC 8 cut(s) 83, 143, 224, 352, 601, 815, 1410, 1576
CviQI GTAC 8 cut(s) 83, 143, 224, 352, 601, 815, 1410, 1576
DdeI CTNAG 8 cut(s) 562, 722, 1032, 1148, 1247, 1319, 1364, 1506
DpnI GATC 5 cut(s) 131, 587, 851, 1305, 1362
DpnII GATC 5 cut(s) 129, 585, 849, 1303, 1360
EaeI YGGCCR 1 cut(s) 742
Eam1104I CTCTTC 1 cut(s) 397
EarI CTCTTC 1 cut(s) 397
Eco130I CCWWGG 3 cut(s) 122, 716, 1482
Eco147I AGGCCT 1 cut(s) 1260
Eco24I GRGCYC 1 cut(s) 1006
Eco31I GGTCTC 1 cut(s) 718
Eco47I GGWCC 3 cut(s) 113, 629, 793
Eco57I CTGAAG 1 cut(s) 951
Eco88I CYCGRG 1 cut(s) 1307
EcoNI CCTNNNNNAGG 1 cut(s) 1505
EcoO109I RGGNCCY 2 cut(s) 113, 793
EcoRI GAATTC 1 cut(s) 278
EcoRII CCWGG 1 cut(s) 631
EcoT14I CCWWGG 3 cut(s) 122, 716, 1482
EcoT38I GRGCYC 1 cut(s) 1006
ErhI CCWWGG 3 cut(s) 122, 716, 1482
FaqI GGGAC 1 cut(s) 1432
FauI CCCGC 1 cut(s) 1116
FbaI TGATCA 1 cut(s) 129
Fnu4HI GCNGC 4 cut(s) 363, 914, 1154, 1569
FokI GGATG 7 cut(s) 25, 150, 595, 635, 776, 1143, 1208
FriOI GRGCYC 1 cut(s) 1006
Fsp4HI GCNGC 4 cut(s) 363, 914, 1154, 1569
FspBI CTAG 4 cut(s) 110, 230, 273, 1446
GlaI GCGC 2 cut(s) 663, 904
GluI GCNGC 4 cut(s) 363, 914, 1154, 1569
GsaI CCCAGC 1 cut(s) 120
HaeIII GGCC 2 cut(s) 744, 1260
HapII CCGG 1 cut(s) 442
HgaI GACGC 3 cut(s) 305, 1275, 1301
HhaI GCGC 2 cut(s) 664, 905
Hin6I GCGC 2 cut(s) 662, 903
HinP1I GCGC 2 cut(s) 662, 903
HincII GTYRAC 1 cut(s) 1337
HindII GTYRAC 1 cut(s) 1337
HinfI GANTC 6 cut(s) 4, 427, 438, 1097, 1142, 1299
HpaII CCGG 1 cut(s) 442
HphI GGTGA 3 cut(s) 252, 544, 943
Hpy166II GTNNAC 4 cut(s) 143, 224, 1337, 1464
Hpy188I TCNGA 5 cut(s) 137, 706, 1012, 1265, 1365
Hpy188III TCNNGA 6 cut(s) 283, 312, 435, 839, 1094, 1307
Hpy8I GTNNAC 4 cut(s) 143, 224, 1337, 1464
Hpy99I CGWCG 2 cut(s) 299, 422
HpyAV CCTTC 5 cut(s) 200, 573, 609, 722, 1383
HpyCH4III ACNGT 5 cut(s) 500, 515, 729, 973, 1432
HpyCH4IV ACGT 2 cut(s) 420, 1357
HpyF10VI GCNNNNNNNGC 6 cut(s) 305, 368, 1001, 1153, 1208, 1266
HpyF3I CTNAG 8 cut(s) 562, 722, 1032, 1148, 1247, 1319, 1364, 1506
HpySE526I ACGT 2 cut(s) 420, 1357
HspAI GCGC 2 cut(s) 662, 903
Ksp22I TGATCA 1 cut(s) 129
Kzo9I GATC 5 cut(s) 129, 585, 849, 1303, 1360
LmnI GCTCC 4 cut(s) 856, 1443, 1470, 1516
Lsp1109I GCAGC 4 cut(s) 374, 925, 1140, 1555
LweI GCATC 9 cut(s) 317, 691, 754, 1026, 1120, 1165, 1189, 1318, 1425
MaeI CTAG 4 cut(s) 110, 230, 273, 1446
MaeII ACGT 2 cut(s) 420, 1357
MalI GATC 5 cut(s) 131, 587, 851, 1305, 1362
MboI GATC 5 cut(s) 129, 585, 849, 1303, 1360
MhlI GDGCHC 3 cut(s) 509, 833, 1006
MlsI TGGCCA 1 cut(s) 744
MluCI AATT 6 cut(s) 267, 278, 774, 844, 1021, 1077
MluNI TGGCCA 1 cut(s) 744
MlyI GAGTC 1 cut(s) 432
MmeI TCCRAC 1 cut(s) 1538
Mox20I TGGCCA 1 cut(s) 744
MscI TGGCCA 1 cut(s) 744
MseI TTAA 2 cut(s) 341, 687
MslI CAYNNNNRTG 6 cut(s) 175, 323, 687, 1320, 1430, 1545
Msp20I TGGCCA 1 cut(s) 744
MspA1I CMGCKG 1 cut(s) 365
MspCI CTTAAG 1 cut(s) 340
MspI CCGG 1 cut(s) 442
MspR9I CCNGG 1 cut(s) 633
MvaI CCWGG 1 cut(s) 633
MwoI GCNNNNNNNGC 6 cut(s) 305, 368, 1001, 1153, 1208, 1266
NcoI CCATGG 2 cut(s) 122, 716
NdeII GATC 5 cut(s) 129, 585, 849, 1303, 1360
NlaIV GGNNCC 4 cut(s) 115, 795, 858, 1512
NspI RCATGY 6 cut(s) 222, 656, 1087, 1477, 1544, 1550
PaeI GCATGC 2 cut(s) 1477, 1544
PceI AGGCCT 1 cut(s) 1260
PciI ACATGT 1 cut(s) 652
PfeI GAWTC 5 cut(s) 4, 427, 1097, 1142, 1299
PflMI CCANNNNNTGG 2 cut(s) 123, 1281
PkrI GCNGC 4 cut(s) 364, 915, 1155, 1570
PleI GAGTC 1 cut(s) 432
PpsI GAGTC 1 cut(s) 432
PpuMI RGGWCCY 2 cut(s) 113, 793
PscI ACATGT 1 cut(s) 652
Psp5II RGGWCCY 2 cut(s) 113, 793
Psp6I CCWGG 1 cut(s) 631
PspFI CCCAGC 1 cut(s) 116
PspGI CCWGG 1 cut(s) 631
PspN4I GGNNCC 4 cut(s) 115, 795, 858, 1512
PspPI GGNCC 3 cut(s) 113, 629, 793
PspPPI RGGWCCY 2 cut(s) 113, 793
PstNI CAGNNNCTG 1 cut(s) 365
PvuII CAGCTG 1 cut(s) 365
RsaI GTAC 8 cut(s) 84, 144, 225, 353, 602, 816, 1411, 1577
RsaNI GTAC 8 cut(s) 83, 143, 224, 352, 601, 815, 1410, 1576
RseI CAYNNNNRTG 6 cut(s) 175, 323, 687, 1320, 1430, 1545
SaqAI TTAA 2 cut(s) 341, 687
SatI GCNGC 4 cut(s) 363, 914, 1154, 1569
Sau3AI GATC 5 cut(s) 129, 585, 849, 1303, 1360
Sau96I GGNCC 3 cut(s) 113, 629, 793
ScaI AGTACT 1 cut(s) 84
SchI GAGTC 1 cut(s) 432
ScrFI CCNGG 1 cut(s) 633
SduI GDGCHC 3 cut(s) 509, 833, 1006
SfaNI GCATC 9 cut(s) 317, 691, 754, 1026, 1120, 1165, 1189, 1318, 1425
SfcI CTRYAG 4 cut(s) 496, 861, 959, 1203
SinI GGWCC 3 cut(s) 113, 629, 793
SmiMI CAYNNNNRTG 6 cut(s) 175, 323, 687, 1320, 1430, 1545
SmlI CTYRAG 1 cut(s) 340
SmoI CTYRAG 1 cut(s) 340
SphI GCATGC 2 cut(s) 1477, 1544
Sse9I AATT 6 cut(s) 267, 278, 774, 844, 1021, 1077
SseBI AGGCCT 1 cut(s) 1260
SsiI CCGC 2 cut(s) 473, 1109
SspMI CTAG 4 cut(s) 110, 230, 273, 1446
StuI AGGCCT 1 cut(s) 1260
StyD4I CCNGG 1 cut(s) 631
StyI CCWWGG 3 cut(s) 122, 716, 1482
TaaI ACNGT 5 cut(s) 500, 515, 729, 973, 1432
TaiI ACGT 2 cut(s) 423, 1360
TaqI TCGA 4 cut(s) 453, 509, 879, 1302
TasI AATT 6 cut(s) 267, 278, 774, 844, 1021, 1077
TatI WGTACW 1 cut(s) 82
TfiI GAWTC 5 cut(s) 4, 427, 1097, 1142, 1299
Tru1I TTAA 2 cut(s) 341, 687
Tru9I TTAA 2 cut(s) 341, 687
TscAI CASTG 6 cut(s) 214, 392, 509, 520, 1198, 1510
TseI GCWGC 4 cut(s) 362, 913, 1153, 1568
TspDTI ATGAA 6 cut(s) 230, 483, 877, 1210, 1360, 1365
TspRI CASTG 6 cut(s) 214, 392, 509, 520, 1198, 1510
Van91I CCANNNNNTGG 2 cut(s) 123, 1281
Vha464I CTTAAG 1 cut(s) 340
VpaK11BI GGWCC 3 cut(s) 113, 629, 793
XagI CCTNNNNNAGG 1 cut(s) 1505
XapI RAATTY 1 cut(s) 278
XceI RCATGY 6 cut(s) 222, 656, 1087, 1477, 1544, 1550
XcmI CCANNNNNNNNNTGG 1 cut(s) 174
XspI CTAG 4 cut(s) 110, 230, 273, 1446
ZrmI AGTACT 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.