Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0001167

Physical Location & Seq

Genomic Coordinates Forward (+)

7774253 .. 7781886

Gene Structure 7634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G008370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGAATCTTGTTACTGCAGTATTACTTTTCTTTGCCCCATTCATCTTTTTAGGCTTTCTTATCCAAAAACTGAAGCGAGTAGTACTCCTACCAGTGCCACCTCTCCCTCCAGGACCAAGCCCATGGCCGATCATCGGATGTGTACTAGAGATGTGGAGGAACAGACCAGCATATAGATGGATACATGACCTTTTGAAACAGCTCAACACTGATATTGCATGTGTAAGACTAGGAAAAGTTCATGTGATCGCAGTCAAATCACCTGAAATTGCCAGAGAATTCTTGAAAAAACACGACGCAGTTTTCGCGTCACGACCCATTACTATGGCTACTCACCACTTAAGTAGTGGGTACTTGACAACAGCTGTTGTACCTTGGGGAGAGCAGTGGAAGAAAATGAGAAAAGTTTTGGTTGCCGACGTGTTGAATCAGTCCAGACTCCGGTGGCTACTCGATAAGAGAAATGATGAAGCGAACACTCTTGTGAGGTTTCTCTATAGTCAGTGCTCGAACAGCGAGAATGGGGTGGTGAATGTGAGAAATGCAACCCAACATTACTCAGCGAGTGTGATGAGAAGGATGATCTTCAACACGAGGTACTTTGGCAATGGAAGAGAGGATGGAGGGCCAGGACTTGAAGAAGAAAGACACGTCTCTGCGCTTTTCACAATACTCTTGCATCTCTATGCATTCTATGTATCCGATTACCTTCCATGGCTGAGACCGTTTGACATAGGTGGGCATGAGAAAAAGGTGAGGGATGCTTTGAAAATTATCAAGCAGTATCAAGACCCTATTATAGATGAGAGAATCAAGGAGCCTGTAGAGGAGGACTTGCTCGATGTTTTCATCTCTCTCAAAGGTGCAGATGGGCAACCTTTATTATCTGCTGAAGAAATCAAAGCACAAATCACCGAACTACAGCTTGCCACGGTGGATAATCCCTCCAATATAGCAGAGTGGGCTCTATCAGAAATGCTGAACCAACCTGAGATGCTTACAAAAGCACAAGAGGAACTAAATAGGATAGTGGGAATCAACATGCTTGTTCAAGAATCTCATATCCCGCATCTCCCTTACATAAGGGCTTGTGCAAGAGAATCGCTCAGGCTGCATCCAGTTGCGCCATTCAATCTTCCCCATTTTTCCACTGCTGATGCTATAGTAGCAGGCTACTTCATCCCAAAGGGCAGTAGTGTTCTTCTAAGTCGTTTAGGCCTCGGACGCAACCCCAAAGTCTGGGAAAACCCGTTGAAATTCGACCCCGAGCGTCATCTAAGTGGAGATGCCAGTCAACAAGTGGAGCTGGAAGAACGTGATCTGAGGTTCATTTCTTTTTCTACTGGAAGGAGAGGTTGCATGGGTGGTACGCTTGGGACTACCATAACTGTGATGCTCCTTGCTAGGCTTCTTCAAGGGTTTACATGGAGCATGCCACCCAAGGTGGATAAGATTGACCTCACTGAGGCTCAAACCCTTTTCAAGCTCAATCCTTTGTATGCTCATGCTAAACCTCGCTTGCCTGCTACTATGTACCTGGTTAGCTGTTCCAGAGTAAACCGCATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006082 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009683 GO:0009684 GO:0009850 GO:0009851 GO:0009987 GO:0010817 GO:0016020 GO:0016053 GO:0016137 GO:0016138 GO:0016491 GO:0018130 GO:0019438 GO:0019748 GO:0019752 GO:0019756 GO:0032787 GO:0034641 GO:0034754 GO:0042341 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043207 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044550 GO:0046394 GO:0046483 GO:0050896 GO:0050898 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0080028 GO:0098542 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00460 ko00966 ko01110 ko01210 map00460 map00966 map01110 map01210

Pfam Domains

Protein Families

p450

Protein Analysis

522

Amino Acids

59.28

Weight (kDa)

9.12

Isoelectric Point (pI)

46.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	36 - 495	9.3e-80	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05260 AT5G05260 AT5G35917 AT5G35920
fragaria_vesca	FvH4_3g09210
malus_domestica	MD10G1235800.v1.1 MD10G1235900.v1.1
prunus_persica	Prupe.7G129100_v2.0.a1 Prupe.7G129500_v2.0.a1
pyrus_communis	pycom10g19740
rosa_chinensis	RchiOBHm_Chr1g0327171 RchiOBHm_Chr3g0470321 RchiOBHm_Chr3g0470341 RchiOBHm_Chr3g0472221 RchiOBHm_Chr3g0472231 RchiOBHm_Chr7g0218701
rosa_laevigata	RLG00000024276 RLG00000030037
rosa_multiflora	Rmu_sc0000449.1_g000025 Rmu_sc0000449.1_g000027 Rmu_sc0001093.1_g000013 Rmu_sc0001093.1_g000015 Rmu_sc0001279.1_g000009 Rmu_sc0002532.1_g000045 Rmu_sc0002532.1_g000046
rosa_roxburghii	Rroxscaffold_4G00323120 Rroxscaffold_4G00323180 Rroxscaffold_5G00348690 Rroxscaffold_5G00348710 Rroxscaffold_6G00410930
rosa_rugosa	Rorug04G0047400
rosa_samantha	Rh1AG081400 Rh1BG064600 Rh1CG079600 Rh1DG085800 Rh3AG158100 Rh3AG175300 Rh3BG102500 Rh3BG182400 Rh3BG182600 Rh3BG200700 Rh3BG200900 Rh3CG173100 Rh3CG173300 Rh3CG192100 Rh3CG199300 Rh3DG103500 Rh3DG174100 Rh3DG192300 Rh4BG117000 Rh4BG117100 Rh7AG321800 Rh7CG338400
rosa_wichuraiana	Rw1G006430 Rw3G008370 Rw3G015020 Rw3G016590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1239
AccII	CGCG	1 cut(s)	308
AciI	CCGC	2 cut(s)	1067, 1561
AcoI	YGGCCR	1 cut(s)	125
AcsI	RAATTY	2 cut(s)	278, 1256
AcuI	CTGAAG	2 cut(s)	92, 912
AfaI	GTAC	7 cut(s)	84, 144, 353, 372, 599, 1369, 1535
AfiI	CCNNNNNNNGG	4 cut(s)	134, 441, 1239, 1465
AflII	CTTAAG	1 cut(s)	340
AflIII	ACRYGT	2 cut(s)	420, 649
AjiI	CACGTC	2 cut(s)	421, 652
AjnI	CCWGG	3 cut(s)	109, 628, 1536
AleI	CACNNNNGTG	1 cut(s)	482
AluBI	AGCT	6 cut(s)	202, 365, 925, 1306, 1486, 1545
AluI	AGCT	6 cut(s)	202, 365, 925, 1306, 1486, 1545
Alw21I	GWGCWC	1 cut(s)	509
Alw26I	GTCTC	2 cut(s)	658, 715
Ama87I	CYCGRG	1 cut(s)	1265
AoxI	GGCC	3 cut(s)	125, 626, 1216
ApeKI	GCWGC	1 cut(s)	1111
ApoI	RAATTY	2 cut(s)	278, 1256
ArsI	GACNNNNNNTTYG	2 cut(s)	287, 319
AspLEI	GCGC	2 cut(s)	661, 1126
AspS9I	GGNCC	2 cut(s)	113, 626
AsuHPI	GGTGA	5 cut(s)	252, 326, 541, 766, 904
AvaI	CYCGRG	1 cut(s)	1265
AvaII	GGWCC	1 cut(s)	113
BanII	GRGCYC	1 cut(s)	967
BauI	CACGAG	1 cut(s)	592
Bbv12I	GWGCWC	1 cut(s)	509
BbvI	GCAGC	1 cut(s)	1098
BccI	CCATC	3 cut(s)	171, 614, 863
BcgI	CGANNNNNNTGC	2 cut(s)	1083, 1117
BciT130I	CCWGG	3 cut(s)	111, 630, 1538
BciVI	GTATCC	2 cut(s)	174, 709
BcoDI	GTCTC	2 cut(s)	658, 715
BfaI	CTAG	3 cut(s)	146, 230, 1404
BfmI	CTRYAG	5 cut(s)	15, 496, 822, 920, 1161
BfrI	CTTAAG	1 cut(s)	340
BfuI	GTATCC	2 cut(s)	174, 709
BisI	GCNGC	1 cut(s)	1112
BlsI	GCNGC	1 cut(s)	1113
BmcAI	AGTACT	1 cut(s)	84
Bme1390I	CCNGG	3 cut(s)	111, 630, 1538
Bme18I	GGWCC	1 cut(s)	113
BmeT110I	CYCGRG	1 cut(s)	1265
BmgBI	CACGTC	2 cut(s)	421, 652
BmgT120I	GGNCC	2 cut(s)	113, 626
BmiI	GGNNCC	1 cut(s)	819
BmrFI	CCNGG	3 cut(s)	111, 630, 1538
BmsI	GCATC	8 cut(s)	688, 751, 984, 1078, 1123, 1147, 1276, 1383
BplI	GAGNNNNNCTC	4 cut(s)	69, 101, 1089, 1121
BpmI	CTGGAG	1 cut(s)	93
Bpu10I	CCTNAGC	1 cut(s)	1106
BsaI	GGTCTC	1 cut(s)	715
BsaJI	CCNNGG	6 cut(s)	122, 374, 713, 930, 1219, 1440
BsaWI	WCCGGW	1 cut(s)	441
Bsc4I	CCNNNNNNNGG	4 cut(s)	134, 441, 1239, 1465
Bse1I	ACTGG	4 cut(s)	92, 1118, 1290, 1348
Bse3DI	GCAATG	1 cut(s)	613
BseBI	CCWGG	3 cut(s)	111, 630, 1538
BseDI	CCNNGG	6 cut(s)	122, 374, 713, 930, 1219, 1440
BseGI	GGATG	6 cut(s)	143, 585, 625, 766, 1114, 1179
BseLI	CCNNNNNNNGG	4 cut(s)	134, 441, 1239, 1465
BseMI	GCAATG	1 cut(s)	613
BseMII	CTCAG	6 cut(s)	573, 710, 981, 1120, 1313, 1455
BseNI	ACTGG	4 cut(s)	92, 1118, 1290, 1348
BseRI	GAGGAG	1 cut(s)	842
BseXI	GCAGC	1 cut(s)	1098
BsgI	GTGCAG	1 cut(s)	885
Bsh1236I	CGCG	1 cut(s)	308
BshFI	GGCC	3 cut(s)	127, 628, 1218
BsiHKAI	GWGCWC	1 cut(s)	509
BsiHKCI	CYCGRG	1 cut(s)	1265
BsiSI	CCGG	1 cut(s)	442
BslFI	GGGAC	1 cut(s)	1390
BslI	CCNNNNNNNGG	4 cut(s)	134, 441, 1239, 1465
BsmAI	GTCTC	2 cut(s)	658, 715
BsmBI	CGTCTC	1 cut(s)	658
BsmFI	GGGAC	1 cut(s)	1390
BsmI	GAATGC	1 cut(s)	689
BsnI	GGCC	3 cut(s)	127, 628, 1218
Bso31I	GGTCTC	1 cut(s)	715
BsoBI	CYCGRG	1 cut(s)	1265
Bsp1286I	GDGCHC	2 cut(s)	509, 967
Bsp143I	GATC	4 cut(s)	129, 246, 582, 1318
Bsp19I	CCATGG	2 cut(s)	122, 713
BspACI	CCGC	2 cut(s)	1067, 1561
BspANI	GGCC	3 cut(s)	127, 628, 1218
BspCNI	CTCAG	6 cut(s)	572, 711, 982, 1119, 1314, 1456
BspFNI	CGCG	1 cut(s)	308
BspLI	GGNNCC	1 cut(s)	819
BspMAI	CTGCAG	1 cut(s)	19
BspTI	CTTAAG	1 cut(s)	340
BspTNI	GGTCTC	1 cut(s)	715
BsrDI	GCAATG	1 cut(s)	613
BsrI	ACTGG	4 cut(s)	92, 1118, 1290, 1348
BssECI	CCNNGG	6 cut(s)	122, 374, 713, 930, 1219, 1440
BssMI	GATC	4 cut(s)	129, 246, 582, 1318
BssSI	CACGAG	1 cut(s)	592
BssT1I	CCWWGG	4 cut(s)	122, 374, 713, 1440
Bst2BI	CACGAG	1 cut(s)	592
Bst2UI	CCWGG	3 cut(s)	111, 630, 1538
Bst4CI	ACNGT	3 cut(s)	726, 934, 1390
Bst6I	CTCTTC	1 cut(s)	607
BstAFI	CTTAAG	1 cut(s)	340
BstC8I	GCNNGC	5 cut(s)	927, 1171, 1433, 1520, 1524
BstDEI	CTNAG	8 cut(s)	559, 719, 990, 1106, 1205, 1277, 1322, 1464
BstDSI	CCRYGG	3 cut(s)	122, 713, 930
BstENI	CCTNNNNNAGG	1 cut(s)	1463
BstF5I	GGATG	6 cut(s)	143, 585, 625, 766, 1114, 1179
BstFNI	CGCG	1 cut(s)	308
BstHHI	GCGC	2 cut(s)	661, 1126
BstKTI	GATC	4 cut(s)	132, 249, 585, 1321
BstMAI	GTCTC	2 cut(s)	658, 715
BstMBI	GATC	4 cut(s)	129, 246, 582, 1318
BstMWI	GCNNNNNNNGC	6 cut(s)	305, 513, 962, 1111, 1166, 1224
BstNI	CCWGG	3 cut(s)	111, 630, 1538
BstNSI	RCATGY	3 cut(s)	222, 1045, 1435
BstSCI	CCNGG	3 cut(s)	109, 628, 1536
BstSFI	CTRYAG	5 cut(s)	15, 496, 822, 920, 1161
BstUI	CGCG	1 cut(s)	308
BstV1I	GCAGC	1 cut(s)	1098
BstXI	CCANNNNNNTGG	2 cut(s)	123, 325
BsuI	GTATCC	2 cut(s)	174, 709
BsuRI	GGCC	3 cut(s)	127, 628, 1218
BtgI	CCRYGG	3 cut(s)	122, 713, 930
BtrI	CACGTC	2 cut(s)	421, 652
BtsCI	GGATG	6 cut(s)	143, 585, 625, 766, 1114, 1179
BtsI	GCAGTG	2 cut(s)	392, 1149
BtsIMutI	CAGTG	6 cut(s)	99, 207, 392, 509, 1149, 1461
Cac8I	GCNNGC	5 cut(s)	927, 1171, 1433, 1520, 1524
CfoI	GCGC	2 cut(s)	661, 1126
Cfr13I	GGNCC	2 cut(s)	113, 626
CseI	GACGC	4 cut(s)	297, 305, 1233, 1259
CsiI	ACCWGGT	1 cut(s)	1536
Csp6I	GTAC	7 cut(s)	83, 143, 352, 371, 598, 1368, 1534
CviQI	GTAC	7 cut(s)	83, 143, 352, 371, 598, 1368, 1534
DdeI	CTNAG	8 cut(s)	559, 719, 990, 1106, 1205, 1277, 1322, 1464
DpnI	GATC	4 cut(s)	131, 248, 584, 1320
DpnII	GATC	4 cut(s)	129, 246, 582, 1318
EaeI	YGGCCR	1 cut(s)	125
Eam1104I	CTCTTC	1 cut(s)	607
EarI	CTCTTC	1 cut(s)	607
Eco130I	CCWWGG	4 cut(s)	122, 374, 713, 1440
Eco147I	AGGCCT	1 cut(s)	1218
Eco24I	GRGCYC	1 cut(s)	967
Eco31I	GGTCTC	1 cut(s)	715
Eco47I	GGWCC	1 cut(s)	113
Eco57I	CTGAAG	2 cut(s)	92, 912
Eco88I	CYCGRG	1 cut(s)	1265
EcoNI	CCTNNNNNAGG	1 cut(s)	1463
EcoRI	GAATTC	1 cut(s)	278
EcoRII	CCWGG	3 cut(s)	109, 628, 1536
EcoT14I	CCWWGG	4 cut(s)	122, 374, 713, 1440
EcoT22I	ATGCAT	1 cut(s)	691
EcoT38I	GRGCYC	1 cut(s)	967
ErhI	CCWWGG	4 cut(s)	122, 374, 713, 1440
Esp3I	CGTCTC	1 cut(s)	658
FaqI	GGGAC	1 cut(s)	1390
FauI	CCCGC	1 cut(s)	1074
Fnu4HI	GCNGC	1 cut(s)	1112
FokI	GGATG	6 cut(s)	150, 592, 632, 773, 1101, 1166
FriOI	GRGCYC	1 cut(s)	967
Fsp4HI	GCNGC	1 cut(s)	1112
FspBI	CTAG	3 cut(s)	146, 230, 1404
GlaI	GCGC	2 cut(s)	660, 1125
GluI	GCNGC	1 cut(s)	1112
GsuI	CTGGAG	1 cut(s)	93
HaeIII	GGCC	3 cut(s)	127, 628, 1218
HapII	CCGG	1 cut(s)	442
HgaI	GACGC	4 cut(s)	297, 305, 1233, 1259
HhaI	GCGC	2 cut(s)	661, 1126
Hin6I	GCGC	2 cut(s)	659, 1124
HinP1I	GCGC	2 cut(s)	659, 1124
HincII	GTYRAC	1 cut(s)	1295
HindII	GTYRAC	1 cut(s)	1295
HinfI	GANTC	7 cut(s)	4, 427, 438, 810, 1035, 1055, 1100
HpaII	CCGG	1 cut(s)	442
HphI	GGTGA	5 cut(s)	252, 326, 541, 766, 904
Hpy166II	GTNNAC	4 cut(s)	143, 1295, 1422, 1558
Hpy188I	TCNGA	5 cut(s)	137, 703, 973, 1223, 1323
Hpy188III	TCNNGA	6 cut(s)	283, 312, 435, 788, 1052, 1551
Hpy8I	GTNNAC	4 cut(s)	143, 1295, 1422, 1558
Hpy99I	CGWCG	2 cut(s)	299, 422
HpyAV	CCTTC	3 cut(s)	570, 719, 1341
HpyCH4III	ACNGT	3 cut(s)	726, 934, 1390
HpyCH4IV	ACGT	3 cut(s)	420, 651, 1315
HpyCH4V	TGCA	9 cut(s)	17, 218, 545, 679, 689, 866, 1094, 1114, 1359
HpyF10VI	GCNNNNNNNGC	6 cut(s)	305, 513, 962, 1111, 1166, 1224
HpyF3I	CTNAG	8 cut(s)	559, 719, 990, 1106, 1205, 1277, 1322, 1464
HpySE526I	ACGT	3 cut(s)	420, 651, 1315
HspAI	GCGC	2 cut(s)	659, 1124
Kzo9I	GATC	4 cut(s)	129, 246, 582, 1318
LmnI	GCTCC	4 cut(s)	817, 1303, 1401, 1428
Lsp1109I	GCAGC	1 cut(s)	1098
LweI	GCATC	8 cut(s)	688, 751, 984, 1078, 1123, 1147, 1276, 1383
MabI	ACCWGGT	1 cut(s)	1536
MaeI	CTAG	3 cut(s)	146, 230, 1404
MaeII	ACGT	3 cut(s)	420, 651, 1315
MaeIII	GTNAC	2 cut(s)	10, 309
MalI	GATC	4 cut(s)	131, 248, 584, 1320
MboI	GATC	4 cut(s)	129, 246, 582, 1318
MhlI	GDGCHC	2 cut(s)	509, 967
MluCI	AATT	4 cut(s)	267, 278, 771, 1256
MlyI	GAGTC	1 cut(s)	432
Mph1103I	ATGCAT	1 cut(s)	691
MseI	TTAA	1 cut(s)	341
MslI	CAYNNNNRTG	6 cut(s)	175, 323, 482, 684, 1278, 1388
MspA1I	CMGCKG	1 cut(s)	365
MspCI	CTTAAG	1 cut(s)	340
MspI	CCGG	1 cut(s)	442
MspR9I	CCNGG	3 cut(s)	111, 630, 1538
Mva1269I	GAATGC	1 cut(s)	689
MvaI	CCWGG	3 cut(s)	111, 630, 1538
MvnI	CGCG	1 cut(s)	308
MwoI	GCNNNNNNNGC	6 cut(s)	305, 513, 962, 1111, 1166, 1224
NcoI	CCATGG	2 cut(s)	122, 713
NdeII	GATC	4 cut(s)	129, 246, 582, 1318
NlaIV	GGNNCC	1 cut(s)	819
NmuCI	GTSAC	1 cut(s)	309
NsiI	ATGCAT	1 cut(s)	691
NspI	RCATGY	3 cut(s)	222, 1045, 1435
OliI	CACNNNNGTG	1 cut(s)	482
PaeI	GCATGC	1 cut(s)	1435
PceI	AGGCCT	1 cut(s)	1218
PctI	GAATGC	1 cut(s)	689
PfeI	GAWTC	6 cut(s)	4, 427, 810, 1035, 1055, 1100
PflMI	CCANNNNNTGG	1 cut(s)	1239
PfoI	TCCNGGA	1 cut(s)	109
PkrI	GCNGC	1 cut(s)	1113
PleI	GAGTC	1 cut(s)	432
PpsI	GAGTC	1 cut(s)	432
Psp6I	CCWGG	3 cut(s)	109, 628, 1536
PspGI	CCWGG	3 cut(s)	109, 628, 1536
PspN4I	GGNNCC	1 cut(s)	819
PspPI	GGNCC	2 cut(s)	113, 626
PstI	CTGCAG	1 cut(s)	19
PvuII	CAGCTG	1 cut(s)	365
RsaI	GTAC	7 cut(s)	84, 144, 353, 372, 599, 1369, 1535
RsaNI	GTAC	7 cut(s)	83, 143, 352, 371, 598, 1368, 1534
RseI	CAYNNNNRTG	6 cut(s)	175, 323, 482, 684, 1278, 1388
SaqAI	TTAA	1 cut(s)	341
SatI	GCNGC	1 cut(s)	1112
Sau3AI	GATC	4 cut(s)	129, 246, 582, 1318
Sau96I	GGNCC	2 cut(s)	113, 626
ScaI	AGTACT	1 cut(s)	84
SchI	GAGTC	1 cut(s)	432
ScrFI	CCNGG	3 cut(s)	111, 630, 1538
SduI	GDGCHC	2 cut(s)	509, 967
SexAI	ACCWGGT	1 cut(s)	1536
SfaNI	GCATC	8 cut(s)	688, 751, 984, 1078, 1123, 1147, 1276, 1383
SfcI	CTRYAG	5 cut(s)	15, 496, 822, 920, 1161
SinI	GGWCC	1 cut(s)	113
SmiMI	CAYNNNNRTG	6 cut(s)	175, 323, 482, 684, 1278, 1388
SmlI	CTYRAG	1 cut(s)	340
SmoI	CTYRAG	1 cut(s)	340
SphI	GCATGC	1 cut(s)	1435
Sse9I	AATT	4 cut(s)	267, 278, 771, 1256
SseBI	AGGCCT	1 cut(s)	1218
SsiI	CCGC	2 cut(s)	1067, 1561
SspMI	CTAG	3 cut(s)	146, 230, 1404
StuI	AGGCCT	1 cut(s)	1218
StyD4I	CCNGG	3 cut(s)	109, 628, 1536
StyI	CCWWGG	4 cut(s)	122, 374, 713, 1440
TaaI	ACNGT	3 cut(s)	726, 934, 1390
TaiI	ACGT	3 cut(s)	423, 654, 1318
TaqI	TCGA	4 cut(s)	453, 509, 840, 1260
TasI	AATT	4 cut(s)	267, 278, 771, 1256
TatI	WGTACW	2 cut(s)	82, 142
TfiI	GAWTC	6 cut(s)	4, 427, 810, 1035, 1055, 1100
Tru1I	TTAA	1 cut(s)	341
Tru9I	TTAA	1 cut(s)	341
TscAI	CASTG	6 cut(s)	99, 214, 392, 509, 1156, 1468
TseFI	GTSAC	1 cut(s)	309
TseI	GCWGC	1 cut(s)	1111
Tsp45I	GTSAC	1 cut(s)	309
TspDTI	ATGAA	7 cut(s)	17, 31, 230, 483, 838, 1168, 1318
TspRI	CASTG	6 cut(s)	99, 214, 392, 509, 1156, 1468
Van91I	CCANNNNNTGG	1 cut(s)	1239
Vha464I	CTTAAG	1 cut(s)	340
VpaK11BI	GGWCC	1 cut(s)	113
XagI	CCTNNNNNAGG	1 cut(s)	1463
XapI	RAATTY	2 cut(s)	278, 1256
XceI	RCATGY	3 cut(s)	222, 1045, 1435
XcmI	CCANNNNNNNNNTGG	3 cut(s)	174, 344, 1297
XspI	CTAG	3 cut(s)	146, 230, 1404
ZrmI	AGTACT	1 cut(s)	84
Zsp2I	ATGCAT	1 cut(s)	691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.