Rmu_sc0001279.1_g000009

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001279.1
Physical Location & Seq
Forward (+)
60144 .. 62564
2421 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001279.1_g000009.1.cds

Sequence Viewer

Length: 1425 bp
atgtggaggaacagaccagcatacagatggatacatgaccttctgaaacagcttaacactgatattgcatgtgtacgactaggaaaagttcatgtgatcgctgtcaaatcacctgaaattgccagagaattcttgaaaaaacacgacgctgtttttgcatcacgacccattaccatggctactcacctcttcagtagtggatacttgacagtaggtgttacacctatgggagagcagtggaagaaaatgagaagggttttgattgctgaagtgtttaatcagtccagactacgttggctactcgaaaagagaaacgatgaagcggacaatcttgtgaagtttctctatagtcagtgctcgaatagcgagaatggttcggtggtgaatgtgagaattgcagcccaacattactcaataaatgtgatgagaagaatgttcttcaacacgaggtactttggcaaagggagagaggatggagggccaggacttgaagaagaattacacgtctctgcgcttttcacattggtcttgcatacgtatgcattctgtgtatccgattaccttccatggttgagatcgtttgacataggtgggcatgagaaaaaggtcaaggatgctttgaaaattatcaagcagtatcaggaccctattatagatgagagagtacgaaagtggaggtgctcaaatcaggagaataggatcaaggcgcctgtagaggagagcctgctcgatgttttcatcgcactcaaaggtgcagatgggcagcctttattatcagctgaagaaatcaaagcacaaatcactcttgccacggtggataatcccttcagtatatcagagtgggctctatcagaaatgctgaaccaacctgagatgcttacaaaagcacaagaggaactaaataggatagtgggaatcgacaagcttgttcaagaatctcatatccctcatctcccttacataagggcttgtgcaagagaatcgctccggctgcatccagttgcaccattcaatcttccccatgtttccactgatgatgctatagtagcaggctacttcatcccaaagggcagtagtgttattctaagtcgtttaggcctcggacgcaaccccaaagtctgggaaaatccgttgagattcgaccccgagcgtcatttaagtggagatgccagtcaacaggtggagctggatgaacatgagctacggttcatttcatttactactggaaggagaggttgcatgggtggtacgcttgggactaccataactgtgatgctctttgctcgtcttcttcaagggtttacatggagcatgccacccaaggtggataagattgacctcactgaggctccaacccttttcaagctccatcctttgcatgcacatgctaaacctcgcttgcctgctgctatgtatccggtttag

Protein Analysis

474

Amino Acids

54.01

Weight (kDa)

9.05

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 706
AccB7I CCANNNNNTGG 1 cut(s) 1119
AciI CCGC 1 cut(s) 323
AclWI GGATC 1 cut(s) 707
AcsI RAATTY 1 cut(s) 128
AcuI CTGAAG 4 cut(s) 175, 288, 801, 811
AcyI GRCGYC 1 cut(s) 707
AfaI GTAC 4 cut(s) 75, 452, 666, 1249
AfiI CCNNNNNNNGG 2 cut(s) 1119, 1345
AflIII ACRYGT 1 cut(s) 502
AgsI TTSAA 8 cut(s) 136, 442, 491, 622, 932, 1012, 1295, 1363
AjiI CACGTC 1 cut(s) 505
AjnI CCWGG 1 cut(s) 481
AluBI AGCT 6 cut(s) 52, 779, 925, 1186, 1201, 1366
AluI AGCT 6 cut(s) 52, 779, 925, 1186, 1201, 1366
Alw21I GWGCWC 2 cut(s) 359, 683
Alw26I GTCTC 1 cut(s) 511
AlwI GGATC 1 cut(s) 707
Ama87I CYCGRG 1 cut(s) 1145
AoxI GGCC 2 cut(s) 479, 1096
ApeKI GCWGC 4 cut(s) 398, 763, 991, 1406
ApoI RAATTY 1 cut(s) 128
ArsI GACNNNNNNTTYG 2 cut(s) 137, 169
AspLEI GCGC 2 cut(s) 514, 709
AspS9I GGNCC 2 cut(s) 479, 643
AsuHPI GGTGA 3 cut(s) 102, 176, 394
AvaI CYCGRG 1 cut(s) 1145
AvaII GGWCC 1 cut(s) 643
BanI GGYRCC 1 cut(s) 706
BanII GRGCYC 1 cut(s) 847
BarI GAAGNNNNNNTAC 2 cut(s) 483, 515
BauI CACGAG 1 cut(s) 445
BbsI GAAGAC 1 cut(s) 1280
Bbv12I GWGCWC 2 cut(s) 359, 683
BbvI GCAGC 4 cut(s) 410, 775, 978, 1393
BccI CCATC 4 cut(s) 21, 467, 752, 1377
BcgI CGANNNNNNTGC 2 cut(s) 963, 997
BciT130I CCWGG 1 cut(s) 483
BciVI GTATCC 4 cut(s) 24, 194, 562, 1425
BcoDI GTCTC 1 cut(s) 511
BfaI CTAG 1 cut(s) 80
BfmI CTRYAG 3 cut(s) 346, 711, 1041
BfoI RGCGCY 1 cut(s) 710
BfuI GTATCC 4 cut(s) 24, 194, 562, 1425
BisI GCNGC 4 cut(s) 399, 764, 992, 1407
BlsI GCNGC 4 cut(s) 400, 765, 993, 1408
Bme1390I CCNGG 1 cut(s) 483
Bme18I GGWCC 1 cut(s) 643
BmeT110I CYCGRG 1 cut(s) 1145
BmgBI CACGTC 1 cut(s) 505
BmgT120I GGNCC 2 cut(s) 479, 643
BmiI GGNNCC 3 cut(s) 645, 708, 1350
BmrFI CCNGG 1 cut(s) 483
BmsI GCATC 7 cut(s) 167, 604, 864, 1003, 1027, 1156, 1263
BpiI GAAGAC 1 cut(s) 1280
BplI GAGNNNNNCTC 2 cut(s) 969, 1001
BsaAI YACGTR 1 cut(s) 537
BsaHI GRCGYC 1 cut(s) 707
BsaJI CCNNGG 5 cut(s) 174, 566, 810, 1099, 1320
BsaWI WCCGGW 1 cut(s) 1417
BsaXI ACNNNNNCTCC 2 cut(s) 1333, 1363
Bsc4I CCNNNNNNNGG 2 cut(s) 1119, 1345
Bse1I ACTGG 3 cut(s) 998, 1170, 1228
BseBI CCWGG 1 cut(s) 483
BseDI CCNNGG 5 cut(s) 174, 566, 810, 1099, 1320
BseGI GGATG 6 cut(s) 478, 619, 994, 1059, 1195, 1369
BseLI CCNNNNNNNGG 2 cut(s) 1119, 1345
BseMII CTCAG 2 cut(s) 861, 1335
BseNI ACTGG 3 cut(s) 998, 1170, 1228
BseRI GAGGAG 1 cut(s) 731
BseXI GCAGC 4 cut(s) 410, 775, 978, 1393
BsgI GTGCAG 1 cut(s) 774
BshFI GGCC 2 cut(s) 481, 1098
BshNI GGYRCC 1 cut(s) 706
BsiHKAI GWGCWC 2 cut(s) 359, 683
BsiHKCI CYCGRG 1 cut(s) 1145
BsiSI CCGG 2 cut(s) 988, 1418
BslFI GGGAC 1 cut(s) 1270
BslI CCNNNNNNNGG 2 cut(s) 1119, 1345
BsmAI GTCTC 1 cut(s) 511
BsmBI CGTCTC 1 cut(s) 511
BsmFI GGGAC 1 cut(s) 1270
BsmI GAATGC 1 cut(s) 542
BsnI GGCC 2 cut(s) 481, 1098
BsoBI CYCGRG 1 cut(s) 1145
Bsp1286I GDGCHC 3 cut(s) 359, 683, 847
Bsp143I GATC 3 cut(s) 96, 575, 699
Bsp19I CCATGG 2 cut(s) 174, 566
BspACI CCGC 1 cut(s) 323
BspANI GGCC 2 cut(s) 481, 1098
BspCNI CTCAG 2 cut(s) 862, 1336
BspLI GGNNCC 3 cut(s) 645, 708, 1350
BspPI GGATC 1 cut(s) 707
BspT107I GGYRCC 1 cut(s) 706
BsrI ACTGG 3 cut(s) 998, 1170, 1228
BssECI CCNNGG 5 cut(s) 174, 566, 810, 1099, 1320
BssMI GATC 3 cut(s) 96, 575, 699
BssNI GRCGYC 1 cut(s) 707
BssSI CACGAG 1 cut(s) 445
BssT1I CCWWGG 3 cut(s) 174, 566, 1320
Bst2BI CACGAG 1 cut(s) 445
Bst2UI CCWGG 1 cut(s) 483
Bst4CI ACNGT 4 cut(s) 211, 814, 1206, 1270
Bst6I CTCTTC 1 cut(s) 194
BstACI GRCGYC 1 cut(s) 707
BstBAI YACGTR 1 cut(s) 537
BstC8I GCNNGC 6 cut(s) 725, 1051, 1313, 1380, 1400, 1404
BstDEI CTNAG 3 cut(s) 870, 1085, 1344
BstDSI CCRYGG 3 cut(s) 174, 566, 810
BstENI CCTNNNNNAGG 1 cut(s) 1343
BstF5I GGATG 6 cut(s) 478, 619, 994, 1059, 1195, 1369
BstH2I RGCGCY 1 cut(s) 710
BstHHI GCGC 2 cut(s) 514, 709
BstKTI GATC 3 cut(s) 99, 578, 702
BstMAI GTCTC 1 cut(s) 511
BstMBI GATC 3 cut(s) 96, 575, 699
BstMWI GCNNNNNNNGC 5 cut(s) 155, 363, 991, 1046, 1104
BstNI CCWGG 1 cut(s) 483
BstNSI RCATGY 4 cut(s) 72, 1315, 1382, 1388
BstSCI CCNGG 1 cut(s) 481
BstSFI CTRYAG 3 cut(s) 346, 711, 1041
BstSNI TACGTA 1 cut(s) 537
BstV1I GCAGC 4 cut(s) 410, 775, 978, 1393
BstV2I GAAGAC 1 cut(s) 1280
BstXI CCANNNNNNTGG 1 cut(s) 175
BsuI GTATCC 4 cut(s) 24, 194, 562, 1425
BsuRI GGCC 2 cut(s) 481, 1098
BtgI CCRYGG 3 cut(s) 174, 566, 810
BtgZI GCGATG 1 cut(s) 724
BtrI CACGTC 1 cut(s) 505
BtsCI GGATG 6 cut(s) 478, 619, 994, 1059, 1195, 1369
BtsI GCAGTG 1 cut(s) 242
BtsIMutI CAGTG 5 cut(s) 57, 242, 359, 1029, 1341
Cac8I GCNNGC 6 cut(s) 725, 1051, 1313, 1380, 1400, 1404
CfoI GCGC 2 cut(s) 514, 709
Cfr13I GGNCC 2 cut(s) 479, 643
CseI GACGC 3 cut(s) 155, 1113, 1139
Csp6I GTAC 4 cut(s) 74, 451, 665, 1248
CviQI GTAC 4 cut(s) 74, 451, 665, 1248
DdeI CTNAG 3 cut(s) 870, 1085, 1344
DinI GGCGCC 1 cut(s) 708
DpnI GATC 3 cut(s) 98, 577, 701
DpnII GATC 3 cut(s) 96, 575, 699
Eam1104I CTCTTC 1 cut(s) 194
EarI CTCTTC 1 cut(s) 194
Eco105I TACGTA 1 cut(s) 537
Eco130I CCWWGG 3 cut(s) 174, 566, 1320
Eco147I AGGCCT 1 cut(s) 1098
Eco24I GRGCYC 1 cut(s) 847
Eco47I GGWCC 1 cut(s) 643
Eco57I CTGAAG 4 cut(s) 175, 288, 801, 811
Eco88I CYCGRG 1 cut(s) 1145
EcoNI CCTNNNNNAGG 1 cut(s) 1343
EcoO109I RGGNCCY 1 cut(s) 643
EcoRI GAATTC 1 cut(s) 128
EcoRII CCWGG 1 cut(s) 481
EcoT14I CCWWGG 3 cut(s) 174, 566, 1320
EcoT22I ATGCAT 1 cut(s) 544
EcoT38I GRGCYC 1 cut(s) 847
EgeI GGCGCC 1 cut(s) 708
EheI GGCGCC 1 cut(s) 708
ErhI CCWWGG 3 cut(s) 174, 566, 1320
Esp3I CGTCTC 1 cut(s) 511
FaqI GGGAC 1 cut(s) 1270
Fnu4HI GCNGC 4 cut(s) 399, 764, 992, 1407
FokI GGATG 6 cut(s) 485, 626, 981, 1046, 1202, 1356
FriOI GRGCYC 1 cut(s) 847
Fsp4HI GCNGC 4 cut(s) 399, 764, 992, 1407
FspBI CTAG 1 cut(s) 80
GlaI GCGC 2 cut(s) 513, 708
GluI GCNGC 4 cut(s) 399, 764, 992, 1407
HaeII RGCGCY 1 cut(s) 710
HaeIII GGCC 2 cut(s) 481, 1098
HapII CCGG 2 cut(s) 988, 1418
HgaI GACGC 3 cut(s) 155, 1113, 1139
HhaI GCGC 2 cut(s) 514, 709
Hin1I GRCGYC 1 cut(s) 707
Hin6I GCGC 2 cut(s) 512, 707
HinP1I GCGC 2 cut(s) 512, 707
HincII GTYRAC 1 cut(s) 1175
HindII GTYRAC 1 cut(s) 1175
HindIII AAGCTT 1 cut(s) 923
HinfI GANTC 4 cut(s) 915, 935, 980, 1137
HpaII CCGG 2 cut(s) 988, 1418
HphI GGTGA 3 cut(s) 102, 176, 394
Hpy166II GTNNAC 3 cut(s) 74, 1175, 1302
Hpy188I TCNGA 5 cut(s) 45, 556, 838, 853, 1103
Hpy188III TCNNGA 6 cut(s) 133, 162, 285, 641, 689, 932
Hpy8I GTNNAC 3 cut(s) 74, 1175, 1302
Hpy99I CGWCG 1 cut(s) 149
HpyAV CCTTC 5 cut(s) 50, 246, 572, 835, 1221
HpyCH4III ACNGT 4 cut(s) 211, 814, 1206, 1270
HpyCH4IV ACGT 3 cut(s) 292, 504, 536
HpyF10VI GCNNNNNNNGC 5 cut(s) 155, 363, 991, 1046, 1104
HpyF3I CTNAG 3 cut(s) 870, 1085, 1344
HpySE526I ACGT 3 cut(s) 292, 504, 536
Hsp92I GRCGYC 1 cut(s) 707
HspAI GCGC 2 cut(s) 512, 707
KasI GGCGCC 1 cut(s) 706
Kzo9I GATC 3 cut(s) 96, 575, 699
LmnI GCTCC 5 cut(s) 990, 1183, 1308, 1354, 1371
Lsp1109I GCAGC 4 cut(s) 410, 775, 978, 1393
LweI GCATC 7 cut(s) 167, 604, 864, 1003, 1027, 1156, 1263
MaeI CTAG 1 cut(s) 80
MaeII ACGT 3 cut(s) 292, 504, 536
MaeIII GTNAC 1 cut(s) 217
MalI GATC 3 cut(s) 98, 577, 701
MboI GATC 3 cut(s) 96, 575, 699
MhlI GDGCHC 3 cut(s) 359, 683, 847
MluCI AATT 5 cut(s) 117, 128, 393, 497, 624
Mly113I GGCGCC 1 cut(s) 707
MmeI TCCRAC 1 cut(s) 1376
Mph1103I ATGCAT 1 cut(s) 544
MseI TTAA 3 cut(s) 54, 276, 1157
MslI CAYNNNNRTG 6 cut(s) 25, 173, 537, 1158, 1268, 1383
MspA1I CMGCKG 1 cut(s) 779
MspI CCGG 2 cut(s) 988, 1418
MspR9I CCNGG 1 cut(s) 483
Mva1269I GAATGC 1 cut(s) 542
MvaI CCWGG 1 cut(s) 483
MwoI GCNNNNNNNGC 5 cut(s) 155, 363, 991, 1046, 1104
NarI GGCGCC 1 cut(s) 707
NcoI CCATGG 2 cut(s) 174, 566
NdeII GATC 3 cut(s) 96, 575, 699
NlaIV GGNNCC 3 cut(s) 645, 708, 1350
NsiI ATGCAT 1 cut(s) 544
NspI RCATGY 4 cut(s) 72, 1315, 1382, 1388
PaeI GCATGC 2 cut(s) 1315, 1382
PceI AGGCCT 1 cut(s) 1098
PctI GAATGC 1 cut(s) 542
PfeI GAWTC 4 cut(s) 915, 935, 980, 1137
PflMI CCANNNNNTGG 1 cut(s) 1119
PkrI GCNGC 4 cut(s) 400, 765, 993, 1408
PluTI GGCGCC 1 cut(s) 710
Ppu21I YACGTR 1 cut(s) 537
PpuMI RGGWCCY 1 cut(s) 643
Psp5II RGGWCCY 1 cut(s) 643
Psp6I CCWGG 1 cut(s) 481
PspGI CCWGG 1 cut(s) 481
PspN4I GGNNCC 3 cut(s) 645, 708, 1350
PspPI GGNCC 2 cut(s) 479, 643
PspPPI RGGWCCY 1 cut(s) 643
PsrI GAACNNNNNNTAC 2 cut(s) 1185, 1217
PvuII CAGCTG 1 cut(s) 779
RsaI GTAC 4 cut(s) 75, 452, 666, 1249
RsaNI GTAC 4 cut(s) 74, 451, 665, 1248
RseI CAYNNNNRTG 6 cut(s) 25, 173, 537, 1158, 1268, 1383
SaqAI TTAA 3 cut(s) 54, 276, 1157
SatI GCNGC 4 cut(s) 399, 764, 992, 1407
Sau3AI GATC 3 cut(s) 96, 575, 699
Sau96I GGNCC 2 cut(s) 479, 643
ScrFI CCNGG 1 cut(s) 483
SduI GDGCHC 3 cut(s) 359, 683, 847
SfaNI GCATC 7 cut(s) 167, 604, 864, 1003, 1027, 1156, 1263
SfcI CTRYAG 3 cut(s) 346, 711, 1041
SfoI GGCGCC 1 cut(s) 708
SinI GGWCC 1 cut(s) 643
SmiMI CAYNNNNRTG 6 cut(s) 25, 173, 537, 1158, 1268, 1383
SnaBI TACGTA 1 cut(s) 537
SphI GCATGC 2 cut(s) 1315, 1382
Sse9I AATT 5 cut(s) 117, 128, 393, 497, 624
SseBI AGGCCT 1 cut(s) 1098
SsiI CCGC 1 cut(s) 323
SspDI GGCGCC 1 cut(s) 706
SspMI CTAG 1 cut(s) 80
StuI AGGCCT 1 cut(s) 1098
StyD4I CCNGG 1 cut(s) 481
StyI CCWWGG 3 cut(s) 174, 566, 1320
TaaI ACNGT 4 cut(s) 211, 814, 1206, 1270
TaiI ACGT 3 cut(s) 295, 507, 539
TaqI TCGA 5 cut(s) 303, 359, 729, 918, 1140
TasI AATT 5 cut(s) 117, 128, 393, 497, 624
TfiI GAWTC 4 cut(s) 915, 935, 980, 1137
Tru1I TTAA 3 cut(s) 54, 276, 1157
Tru9I TTAA 3 cut(s) 54, 276, 1157
TscAI CASTG 5 cut(s) 64, 242, 359, 1036, 1348
TseI GCWGC 4 cut(s) 398, 763, 991, 1406
TspDTI ATGAA 7 cut(s) 80, 333, 727, 1048, 1198, 1203, 1206
TspGWI ACGGA 1 cut(s) 1119
TspRI CASTG 5 cut(s) 64, 242, 359, 1036, 1348
Van91I CCANNNNNTGG 1 cut(s) 1119
VpaK11BI GGWCC 1 cut(s) 643
XagI CCTNNNNNAGG 1 cut(s) 1343
XapI RAATTY 1 cut(s) 128
XceI RCATGY 4 cut(s) 72, 1315, 1382, 1388
XcmI CCANNNNNNNNNTGG 2 cut(s) 24, 1177
XspI CTAG 1 cut(s) 80
Zsp2I ATGCAT 1 cut(s) 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.