Rmu_sc0000498.1_g000032

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000498.1
Physical Location & Seq
Reverse (-)
137963 .. 139204
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000498.1_g000032.1.cds

Sequence Viewer

Length: 426 bp
atgggatggtcaagacttgctgacgtatgcattcatgacgggaagctgttgggatgctcttactatcgaaattctattggagtctgggttgcggatgtgtcggaaaccagtgctaagaagcagattcctgcagcagggttgctcccaaagtctaatgaaaagacggtcaataaatctctggtttcgcctagcatcgtacctcgaaacagtcccaatgcaaaagatttagctaactctggaagagaatctgttgcatttccgaaaaggcgtgctatgttgctcagaccagctcatgtgcgaagcccatcaaatagcaaagttgacgtgcagaagccaccgttggccgttgaatatgaaactttcagcagtatgacgagtaaattggatggtgcagtgggtctcagttctcaaatcaaaactgtataa
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

141

Amino Acids

15.19

Weight (kDa)

9.85

Isoelectric Point (pI)

47.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 92
AcoI YGGCCR 1 cut(s) 342
AcsI RAATTY 1 cut(s) 70
AfaI GTAC 1 cut(s) 198
AfiI CCNNNNNNNGG 1 cut(s) 134
AgsI TTSAA 1 cut(s) 350
AjiI CACGTC 1 cut(s) 325
AjuI GAANNNNNNNTTGG 2 cut(s) 323, 355
AluBI AGCT 3 cut(s) 46, 230, 290
AluI AGCT 3 cut(s) 46, 230, 290
Alw26I GTCTC 1 cut(s) 404
AoxI GGCC 1 cut(s) 342
ApeKI GCWGC 1 cut(s) 131
ApoI RAATTY 1 cut(s) 70
BbvI GCAGC 1 cut(s) 143
BccI CCATC 2 cut(s) 313, 380
BceAI ACGGC 1 cut(s) 329
BcoDI GTCTC 1 cut(s) 404
BfaI CTAG 1 cut(s) 189
BfmI CTRYAG 1 cut(s) 129
BisI GCNGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 133
BmgBI CACGTC 1 cut(s) 325
BmsI GCATC 2 cut(s) 44, 201
BsaI GGTCTC 1 cut(s) 404
BsaXI ACNNNNNCTCC 2 cut(s) 72, 102
Bsc4I CCNNNNNNNGG 1 cut(s) 134
Bse1I ACTGG 1 cut(s) 108
BseGI GGATG 4 cut(s) 11, 59, 100, 391
BseLI CCNNNNNNNGG 1 cut(s) 134
BseMII CTCAG 2 cut(s) 295, 415
BseNI ACTGG 1 cut(s) 108
BseXI GCAGC 1 cut(s) 143
BsgI GTGCAG 2 cut(s) 347, 411
BshFI GGCC 1 cut(s) 344
BslFI GGGAC 1 cut(s) 195
BslI CCNNNNNNNGG 1 cut(s) 134
BsmAI GTCTC 1 cut(s) 404
BsmFI GGGAC 1 cut(s) 195
BsmI GAATGC 1 cut(s) 30
BsnI GGCC 1 cut(s) 344
Bso31I GGTCTC 1 cut(s) 404
BspACI CCGC 1 cut(s) 92
BspANI GGCC 1 cut(s) 344
BspCNI CTCAG 2 cut(s) 294, 414
BspHI TCATGA 1 cut(s) 34
BspMAI CTGCAG 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 404
BsrI ACTGG 1 cut(s) 108
Bst4CI ACNGT 4 cut(s) 166, 209, 339, 421
Bst6I CTCTTC 1 cut(s) 235
BstC8I GCNNGC 1 cut(s) 270
BstDEI CTNAG 3 cut(s) 114, 281, 401
BstENI CCTNNNNNAGG 1 cut(s) 132
BstF5I GGATG 4 cut(s) 11, 59, 100, 391
BstMAI GTCTC 1 cut(s) 404
BstSFI CTRYAG 1 cut(s) 129
BstV1I GCAGC 1 cut(s) 143
BsuRI GGCC 1 cut(s) 344
BtrI CACGTC 1 cut(s) 325
BtsCI GGATG 4 cut(s) 11, 59, 100, 391
BtsI GCAGTG 1 cut(s) 399
BtsIMutI CAGTG 2 cut(s) 115, 399
Cac8I GCNNGC 1 cut(s) 270
CciI TCATGA 1 cut(s) 34
Csp6I GTAC 1 cut(s) 197
CviAII CATG 2 cut(s) 35, 293
CviJI RGCY 6 cut(s) 46, 230, 290, 303, 334, 344
CviKI_1 RGCY 6 cut(s) 46, 230, 290, 303, 334, 344
CviQI GTAC 1 cut(s) 197
DdeI CTNAG 3 cut(s) 114, 281, 401
EaeI YGGCCR 1 cut(s) 342
Eam1104I CTCTTC 1 cut(s) 235
EarI CTCTTC 1 cut(s) 235
Eco31I GGTCTC 1 cut(s) 404
EcoNI CCTNNNNNAGG 1 cut(s) 132
EcoT22I ATGCAT 1 cut(s) 32
FaeI CATG 2 cut(s) 38, 296
FaiI YATR 7 cut(s) 28, 36, 275, 294, 354, 371, 424
FaqI GGGAC 1 cut(s) 195
FatI CATG 2 cut(s) 34, 292
Fnu4HI GCNGC 1 cut(s) 132
FokI GGATG 4 cut(s) 18, 66, 107, 398
Fsp4HI GCNGC 1 cut(s) 132
FspBI CTAG 1 cut(s) 189
GluI GCNGC 1 cut(s) 132
HaeIII GGCC 1 cut(s) 344
Hin1II CATG 2 cut(s) 38, 296
HincII GTYRAC 1 cut(s) 322
HindII GTYRAC 1 cut(s) 322
HinfI GANTC 3 cut(s) 81, 124, 245
Hpy166II GTNNAC 1 cut(s) 322
Hpy188I TCNGA 3 cut(s) 103, 261, 284
Hpy188III TCNNGA 3 cut(s) 12, 35, 237
Hpy8I GTNNAC 1 cut(s) 322
HpyCH4III ACNGT 4 cut(s) 166, 209, 339, 421
HpyCH4IV ACGT 2 cut(s) 24, 324
HpyCH4V TGCA 6 cut(s) 30, 131, 218, 254, 328, 392
HpyF3I CTNAG 3 cut(s) 114, 281, 401
HpySE526I ACGT 2 cut(s) 24, 324
Hsp92II CATG 2 cut(s) 38, 296
LmnI GCTCC 1 cut(s) 147
LpnPI CCDG 7 cut(s) 70, 120, 121, 141, 164, 222, 300
Lsp1109I GCAGC 1 cut(s) 143
LweI GCATC 2 cut(s) 44, 201
MaeI CTAG 1 cut(s) 189
MaeII ACGT 2 cut(s) 24, 324
MboII GAAGA 1 cut(s) 252
MluCI AATT 2 cut(s) 70, 380
MlyI GAGTC 1 cut(s) 90
MmeI TCCRAC 1 cut(s) 81
MnlI CCTC 1 cut(s) 210
Mph1103I ATGCAT 1 cut(s) 32
Mva1269I GAATGC 1 cut(s) 30
NlaIII CATG 2 cut(s) 38, 296
NsiI ATGCAT 1 cut(s) 32
PagI TCATGA 1 cut(s) 34
PctI GAATGC 1 cut(s) 30
PfeI GAWTC 2 cut(s) 124, 245
PkrI GCNGC 1 cut(s) 133
PleI GAGTC 1 cut(s) 89
PpsI GAGTC 1 cut(s) 89
PstI CTGCAG 1 cut(s) 133
RsaI GTAC 1 cut(s) 198
RsaNI GTAC 1 cut(s) 197
SatI GCNGC 1 cut(s) 132
SchI GAGTC 1 cut(s) 90
SetI ASST 6 cut(s) 27, 48, 202, 232, 292, 327
SfaNI GCATC 2 cut(s) 44, 201
SfcI CTRYAG 1 cut(s) 129
Sse9I AATT 2 cut(s) 70, 380
SsiI CCGC 1 cut(s) 92
SspMI CTAG 1 cut(s) 189
TaaI ACNGT 4 cut(s) 166, 209, 339, 421
TaiI ACGT 2 cut(s) 27, 327
TaqI TCGA 2 cut(s) 67, 202
TasI AATT 2 cut(s) 70, 380
TfiI GAWTC 2 cut(s) 124, 245
TscAI CASTG 2 cut(s) 115, 399
TseI GCWGC 1 cut(s) 131
TspDTI ATGAA 3 cut(s) 23, 171, 369
TspRI CASTG 2 cut(s) 115, 399
XagI CCTNNNNNAGG 1 cut(s) 132
XapI RAATTY 1 cut(s) 70
XspI CTAG 1 cut(s) 189
Zsp2I ATGCAT 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.