Rmu_sc0004368.1_g000024

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004368.1
Physical Location & Seq
Reverse (-)
108891 .. 112646
3756 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004368.1_g000024.1.cds

Sequence Viewer

Length: 1491 bp
atggcagttaaggattttagttgctgccgaaggatgcaggaggaggcagggccgagagggctgcaggagcagctgcaggctagcagcttgatgcaatgctgcaggtgcacgggcacgcaagcaggcagctgcggacgtaggggctcgcaggcagggctgcgtcttttggatacttacttgttggttttggatcacgcgcgtgtcgatgcaggcgtgatggagcgaagtaatctaagtagaggcgtgcaacggatgcggggcagcaggggctgcggtggtgatggcagtgcacgggcacgcaagcaggcagctgcggacgcaggggcgcacaggcagggcaggcagcagggctgcaggtgcacgggcgcgcaggtaggcagacgagcgcaggggcgcgtagcgcggggcagatgcggcgggggctcgctagcacgggctaggggctgctggggtagtcggcacgcaggtagacaaaaggctgctggggtagtcggcacgcaggtagacagaaggctgcaggcaagtgcttgcggcagaattttggcaaaggaagttttgtttttgtggattgggaaatctagaaccttctctcctattcctattcctagtttgataaggcacactaaacttgattttccttcaacaattctcagtttcttctgggttccgttgctccgtcgctctctctctctcttttctgcacgctccgtcggccgtcggccagtcgctctctatctatccgacaggctctctctcgatcagtcgattgactcgattctcagtctctctccggccagctctctagctctccagctcgcaggtaaactctattctcagtttttctgggttttactctcaatcgaatttctgggttcacacttttcagggttttctgggtttgattttgggttggatttctgggttcaaggcttcaagcttggtgattcttcaaccttgaagcttggttcagcagacagaactgtgaaattctgggatctggaaacttttgaactgattggatctaccaggcctgagcctacaggagtacgcgcaattactttccaccctgatgagaggacaatattttctggattggatgacagtttgaaggtttattcatgggagcctgtaatatcccatgattctgttgatatgggatggtcaagacttgctgacgtatgcattcatgacgggaagctgttgggatgctcttactatcaaaattctattggagtctgggttgcggatgtgtcgcttattaagccatatggagctggttcaacacctgagcaaaatgactgtttagatgagaaatctcatgtaatgttgcaaggaatcatggagaaggtagagactggtataaggggtccggatacttttcacgaagagaagagcaaacgtgaaagaagaaaagaaaacaaagctttgactatggaattgatggctgtggcatattcaacttacaatgtggaagaggctggtgatctgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

496

Amino Acids

54.48

Weight (kDa)

9.32

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 93, 345
Acc36I ACCTGC 6 cut(s) 93, 345, 361, 455, 490, 809
AccI GTMKAC 2 cut(s) 469, 504
AccII CGCG 6 cut(s) 197, 199, 368, 396, 403, 1050
AccIII TCCGGA 1 cut(s) 1369
AciI CCGC 9 cut(s) 132, 256, 273, 314, 403, 414, 417, 531, 1244
AclWI GGATC 3 cut(s) 198, 1002, 1027
AcoI YGGCCR 3 cut(s) 712, 719, 792
AcsI RAATTY 4 cut(s) 537, 863, 986, 1222
AfaI GTAC 1 cut(s) 1047
AgsI TTSAA 9 cut(s) 642, 926, 934, 951, 958, 1010, 1108, 1281, 1458
AjnI CCWGG 1 cut(s) 1025
AleI CACNNNNGTG 1 cut(s) 198
AloI GAACNNNNNNTCC 2 cut(s) 574, 606
Alw21I GWGCWC 3 cut(s) 110, 292, 362
Alw26I GTCTC 2 cut(s) 788, 1346
Alw44I GTGCAC 3 cut(s) 106, 288, 358
AlwI GGATC 3 cut(s) 198, 1002, 1027
AlwNI CAGNNNCTG 1 cut(s) 270
Aor13HI TCCGGA 1 cut(s) 1369
AoxI GGCC 5 cut(s) 50, 712, 719, 792, 1028
ApaLI GTGCAC 3 cut(s) 106, 288, 358
ApoI RAATTY 4 cut(s) 537, 863, 986, 1222
AspLEI GCGC 8 cut(s) 199, 328, 368, 370, 388, 396, 403, 1052
AspS9I GGNCC 2 cut(s) 50, 1367
AsuHPI GGTGA 2 cut(s) 290, 953
AsuNHI GCTAGC 2 cut(s) 80, 427
AvaII GGWCC 1 cut(s) 1367
BaeGI GKGCMC 5 cut(s) 110, 116, 292, 298, 362
BanII GRGCYC 2 cut(s) 146, 425
Bbv12I GWGCWC 3 cut(s) 110, 292, 362
BccI CCATC 4 cut(s) 211, 275, 1152, 1435
BceAI ACGGC 1 cut(s) 699
BcgI CGANNNNNNTGC 2 cut(s) 43, 77
BciT130I CCWGG 1 cut(s) 1027
BciVI GTATCC 2 cut(s) 163, 1366
BcoDI GTCTC 2 cut(s) 788, 1346
BfaI CTAG 6 cut(s) 81, 428, 438, 579, 606, 803
BfmI CTRYAG 6 cut(s) 62, 74, 100, 352, 515, 1038
BfuAI ACCTGC 6 cut(s) 93, 345, 361, 455, 490, 809
BfuI GTATCC 2 cut(s) 163, 1366
BglI GCCNNNNNGGC 1 cut(s) 58
Bme1390I CCNGG 1 cut(s) 1027
Bme18I GGWCC 1 cut(s) 1367
BmgT120I GGNCC 2 cut(s) 50, 1367
BmiI GGNNCC 3 cut(s) 666, 1125, 1368
BmrFI CCNGG 1 cut(s) 1027
BmsI GCATC 6 cut(s) 24, 81, 196, 243, 401, 1196
BmtI GCTAGC 2 cut(s) 84, 431
BpmI CTGGAG 1 cut(s) 794
Bpu10I CCTNAGC 2 cut(s) 1032, 1287
BsaWI WCCGGW 1 cut(s) 1369
BsaXI ACNNNNNCTCC 4 cut(s) 574, 604, 1224, 1254
Bse1I ACTGG 2 cut(s) 722, 1360
Bse3DI GCAATG 1 cut(s) 101
BseAI TCCGGA 1 cut(s) 1369
BseBI CCWGG 1 cut(s) 1027
BseGI GGATG 6 cut(s) 39, 258, 1102, 1163, 1211, 1252
BseMI GCAATG 1 cut(s) 101
BseMII CTCAG 5 cut(s) 664, 793, 848, 1023, 1278
BseNI ACTGG 2 cut(s) 722, 1360
BsePI GCGCGC 1 cut(s) 366
BseRI GAGGAG 1 cut(s) 56
BseSI GKGCMC 5 cut(s) 110, 116, 292, 298, 362
BseX3I CGGCCG 1 cut(s) 712
BseYI CCCAGC 2 cut(s) 447, 482
BsgI GTGCAG 1 cut(s) 684
Bsh1236I CGCG 6 cut(s) 197, 199, 368, 396, 403, 1050
Bsh1285I CGRYCG 1 cut(s) 715
BshFI GGCC 5 cut(s) 52, 714, 721, 794, 1030
BsiEI CGRYCG 1 cut(s) 715
BsiHKAI GWGCWC 3 cut(s) 110, 292, 362
BsiSI CCGG 2 cut(s) 791, 1370
BsmAI GTCTC 2 cut(s) 788, 1346
BsmI GAATGC 1 cut(s) 1182
BsnI GGCC 5 cut(s) 52, 714, 721, 794, 1030
Bsp1286I GDGCHC 7 cut(s) 110, 116, 146, 292, 298, 362, 425
Bsp13I TCCGGA 1 cut(s) 1369
Bsp143I GATC 5 cut(s) 190, 757, 994, 1019, 1483
BspACI CCGC 9 cut(s) 132, 256, 273, 314, 403, 414, 417, 531, 1244
BspANI GGCC 5 cut(s) 52, 714, 721, 794, 1030
BspCNI CTCAG 5 cut(s) 663, 792, 847, 1024, 1279
BspEI TCCGGA 1 cut(s) 1369
BspFNI CGCG 6 cut(s) 197, 199, 368, 396, 403, 1050
BspHI TCATGA 1 cut(s) 1186
BspLI GGNNCC 3 cut(s) 666, 1125, 1368
BspMAI CTGCAG 5 cut(s) 66, 78, 104, 356, 519
BspMI ACCTGC 6 cut(s) 93, 345, 361, 455, 490, 809
BspOI GCTAGC 2 cut(s) 84, 431
BspPI GGATC 3 cut(s) 198, 1002, 1027
BspQI GCTCTTC 1 cut(s) 1385
BsrDI GCAATG 1 cut(s) 101
BsrI ACTGG 2 cut(s) 722, 1360
BssHII GCGCGC 1 cut(s) 366
BssMI GATC 5 cut(s) 190, 757, 994, 1019, 1483
Bst2UI CCWGG 1 cut(s) 1027
Bst4CI ACNGT 3 cut(s) 982, 1103, 1301
Bst6I CTCTTC 3 cut(s) 1380, 1385, 1467
BstAPI GCANNNNNTGC 2 cut(s) 253, 270
BstDEI CTNAG 6 cut(s) 233, 650, 779, 834, 1032, 1287
BstF5I GGATG 6 cut(s) 39, 258, 1102, 1163, 1211, 1252
BstFNI CGCG 6 cut(s) 197, 199, 368, 396, 403, 1050
BstHHI GCGC 8 cut(s) 199, 328, 368, 370, 388, 396, 403, 1052
BstKTI GATC 5 cut(s) 193, 760, 997, 1022, 1486
BstMAI GTCTC 2 cut(s) 788, 1346
BstMBI GATC 5 cut(s) 190, 757, 994, 1019, 1483
BstMCI CGRYCG 1 cut(s) 715
BstNI CCWGG 1 cut(s) 1027
BstSCI CCNGG 1 cut(s) 1025
BstSFI CTRYAG 6 cut(s) 62, 74, 100, 352, 515, 1038
BstSLI GKGCMC 5 cut(s) 110, 116, 292, 298, 362
BstUI CGCG 6 cut(s) 197, 199, 368, 396, 403, 1050
BstX2I RGATCY 2 cut(s) 994, 1019
BstYI RGATCY 2 cut(s) 994, 1019
BstZI CGGCCG 1 cut(s) 712
BsuI GTATCC 2 cut(s) 163, 1366
BsuRI GGCC 5 cut(s) 52, 714, 721, 794, 1030
BtsCI GGATG 6 cut(s) 39, 258, 1102, 1163, 1211, 1252
BtsI GCAGTG 1 cut(s) 292
BtsIMutI CAGTG 1 cut(s) 292
BveI ACCTGC 6 cut(s) 93, 345, 361, 455, 490, 809
CaiI CAGNNNCTG 1 cut(s) 270
CciI TCATGA 1 cut(s) 1186
CfoI GCGC 8 cut(s) 199, 328, 368, 370, 388, 396, 403, 1052
Cfr13I GGNCC 2 cut(s) 50, 1367
CseI GACGC 2 cut(s) 149, 326
Csp6I GTAC 1 cut(s) 1046
CviAII CATG 5 cut(s) 1119, 1139, 1187, 1319, 1339
CviQI GTAC 1 cut(s) 1046
DdeI CTNAG 6 cut(s) 233, 650, 779, 834, 1032, 1287
DpnI GATC 5 cut(s) 192, 759, 996, 1021, 1485
DpnII GATC 5 cut(s) 190, 757, 994, 1019, 1483
EaeI YGGCCR 3 cut(s) 712, 719, 792
EagI CGGCCG 1 cut(s) 712
Eam1104I CTCTTC 3 cut(s) 1380, 1385, 1467
EarI CTCTTC 3 cut(s) 1380, 1385, 1467
EclXI CGGCCG 1 cut(s) 712
Eco147I AGGCCT 1 cut(s) 1030
Eco24I GRGCYC 2 cut(s) 146, 425
Eco47I GGWCC 1 cut(s) 1367
Eco52I CGGCCG 1 cut(s) 712
EcoRII CCWGG 1 cut(s) 1025
EcoT22I ATGCAT 1 cut(s) 1184
EcoT38I GRGCYC 2 cut(s) 146, 425
FaeI CATG 5 cut(s) 1122, 1142, 1190, 1322, 1342
FatI CATG 5 cut(s) 1118, 1138, 1186, 1318, 1338
FauI CCCGC 3 cut(s) 249, 396, 410
FauNDI CATATG 1 cut(s) 1267
FblI GTMKAC 2 cut(s) 469, 504
FokI GGATG 6 cut(s) 46, 265, 1109, 1170, 1218, 1259
FriOI GRGCYC 2 cut(s) 146, 425
FspBI CTAG 6 cut(s) 81, 428, 438, 579, 606, 803
GlaI GCGC 8 cut(s) 198, 327, 367, 369, 387, 395, 402, 1051
GsaI CCCAGC 2 cut(s) 451, 486
GsuI CTGGAG 1 cut(s) 794
HaeIII GGCC 5 cut(s) 52, 714, 721, 794, 1030
HapII CCGG 2 cut(s) 791, 1370
HgaI GACGC 2 cut(s) 149, 326
HhaI GCGC 8 cut(s) 199, 328, 368, 370, 388, 396, 403, 1052
Hin1II CATG 5 cut(s) 1122, 1142, 1190, 1322, 1342
Hin6I GCGC 8 cut(s) 197, 326, 366, 368, 386, 394, 401, 1050
HinP1I GCGC 8 cut(s) 197, 326, 366, 368, 386, 394, 401, 1050
HindIII AAGCTT 3 cut(s) 935, 959, 1422
HinfI GANTC 6 cut(s) 770, 775, 944, 1142, 1233, 1335
HpaII CCGG 2 cut(s) 791, 1370
HphI GGTGA 2 cut(s) 290, 953
Hpy166II GTNNAC 7 cut(s) 108, 290, 360, 470, 505, 824, 875
Hpy188I TCNGA 1 cut(s) 742
Hpy188III TCNNGA 8 cut(s) 579, 755, 998, 1089, 1164, 1187, 1370, 1382
Hpy8I GTNNAC 7 cut(s) 108, 290, 360, 470, 505, 824, 875
Hpy99I CGWCG 3 cut(s) 681, 713, 720
HpyAV CCTTC 6 cut(s) 24, 504, 595, 648, 1102, 1339
HpyCH4III ACNGT 3 cut(s) 982, 1103, 1301
HpyCH4IV ACGT 3 cut(s) 136, 1176, 1399
HpyF3I CTNAG 6 cut(s) 233, 650, 779, 834, 1032, 1287
HpySE526I ACGT 3 cut(s) 136, 1176, 1399
Hsp92II CATG 5 cut(s) 1122, 1142, 1190, 1322, 1342
HspAI GCGC 8 cut(s) 197, 326, 366, 368, 386, 394, 401, 1050
Kpn2I TCCGGA 1 cut(s) 1369
Kzo9I GATC 5 cut(s) 190, 757, 994, 1019, 1483
LguI GCTCTTC 1 cut(s) 1385
LmnI GCTCC 6 cut(s) 67, 220, 678, 710, 1123, 1271
LweI GCATC 6 cut(s) 24, 81, 196, 243, 401, 1196
MaeI CTAG 6 cut(s) 81, 428, 438, 579, 606, 803
MaeII ACGT 3 cut(s) 136, 1176, 1399
MalI GATC 5 cut(s) 192, 759, 996, 1021, 1485
MboI GATC 5 cut(s) 190, 757, 994, 1019, 1483
MboII GAAGA 6 cut(s) 649, 939, 1397, 1402, 1419, 1484
MflI RGATCY 2 cut(s) 994, 1019
MhlI GDGCHC 7 cut(s) 110, 116, 146, 292, 298, 362, 425
MluCI AATT 7 cut(s) 537, 645, 863, 986, 1053, 1222, 1436
MlyI GAGTC 2 cut(s) 764, 1242
MmeI TCCRAC 2 cut(s) 765, 891
MnlI CCTC 6 cut(s) 34, 37, 50, 233, 1068, 1468
Mph1103I ATGCAT 1 cut(s) 1184
MroI TCCGGA 1 cut(s) 1369
MseI TTAA 2 cut(s) 9, 1260
MslI CAYNNNNRTG 2 cut(s) 198, 1068
MspA1I CMGCKG 3 cut(s) 73, 129, 311
MspI CCGG 2 cut(s) 791, 1370
MspR9I CCNGG 1 cut(s) 1027
Mva1269I GAATGC 1 cut(s) 1182
MvaI CCWGG 1 cut(s) 1027
MvnI CGCG 6 cut(s) 197, 199, 368, 396, 403, 1050
NdeI CATATG 1 cut(s) 1267
NdeII GATC 5 cut(s) 190, 757, 994, 1019, 1483
NheI GCTAGC 2 cut(s) 80, 427
NlaIII CATG 5 cut(s) 1122, 1142, 1190, 1322, 1342
NlaIV GGNNCC 3 cut(s) 666, 1125, 1368
NmeAIII GCCGAG 1 cut(s) 78
NsiI ATGCAT 1 cut(s) 1184
OliI CACNNNNGTG 1 cut(s) 198
PagI TCATGA 1 cut(s) 1186
PaqCI CACCTGC 2 cut(s) 93, 345
PauI GCGCGC 1 cut(s) 366
PceI AGGCCT 1 cut(s) 1030
PciSI GCTCTTC 1 cut(s) 1385
PcsI WCGNNNNNNNCGW 3 cut(s) 201, 210, 770
PctI GAATGC 1 cut(s) 1182
PfeI GAWTC 4 cut(s) 775, 944, 1142, 1335
PleI GAGTC 2 cut(s) 764, 1241
PpsI GAGTC 2 cut(s) 764, 1241
Psp6I CCWGG 1 cut(s) 1025
PspFI CCCAGC 2 cut(s) 447, 482
PspGI CCWGG 1 cut(s) 1025
PspN4I GGNNCC 3 cut(s) 666, 1125, 1368
PspPI GGNCC 2 cut(s) 50, 1367
PstI CTGCAG 5 cut(s) 66, 78, 104, 356, 519
PstNI CAGNNNCTG 1 cut(s) 270
PsuI RGATCY 2 cut(s) 994, 1019
PteI GCGCGC 1 cut(s) 366
PvuII CAGCTG 3 cut(s) 73, 129, 311
RsaI GTAC 1 cut(s) 1047
RsaNI GTAC 1 cut(s) 1046
RseI CAYNNNNRTG 2 cut(s) 198, 1068
SapI GCTCTTC 1 cut(s) 1385
SaqAI TTAA 2 cut(s) 9, 1260
Sau3AI GATC 5 cut(s) 190, 757, 994, 1019, 1483
Sau96I GGNCC 2 cut(s) 50, 1367
SchI GAGTC 2 cut(s) 764, 1242
ScrFI CCNGG 1 cut(s) 1027
SduI GDGCHC 7 cut(s) 110, 116, 146, 292, 298, 362, 425
SfaNI GCATC 6 cut(s) 24, 81, 196, 243, 401, 1196
SfcI CTRYAG 6 cut(s) 62, 74, 100, 352, 515, 1038
SinI GGWCC 1 cut(s) 1367
SmiMI CAYNNNNRTG 2 cut(s) 198, 1068
Sse9I AATT 7 cut(s) 537, 645, 863, 986, 1053, 1222, 1436
SseBI AGGCCT 1 cut(s) 1030
SsiI CCGC 9 cut(s) 132, 256, 273, 314, 403, 414, 417, 531, 1244
SspI AATATT 1 cut(s) 1083
SspMI CTAG 6 cut(s) 81, 428, 438, 579, 606, 803
StuI AGGCCT 1 cut(s) 1030
StyD4I CCNGG 1 cut(s) 1025
TaaI ACNGT 3 cut(s) 982, 1103, 1301
TaiI ACGT 3 cut(s) 139, 1179, 1402
TaqI TCGA 5 cut(s) 204, 756, 764, 773, 861
TasI AATT 7 cut(s) 537, 645, 863, 986, 1053, 1222, 1436
TauI GCSGC 2 cut(s) 417, 534
TfiI GAWTC 4 cut(s) 775, 944, 1142, 1335
Tru1I TTAA 2 cut(s) 9, 1260
Tru9I TTAA 2 cut(s) 9, 1260
TscAI CASTG 1 cut(s) 292
TspDTI ATGAA 2 cut(s) 1107, 1175
TspGWI ACGGA 4 cut(s) 265, 657, 665, 697
TspRI CASTG 1 cut(s) 292
VneI GTGCAC 3 cut(s) 106, 288, 358
VpaK11BI GGWCC 1 cut(s) 1367
XapI RAATTY 4 cut(s) 537, 863, 986, 1222
XbaI TCTAGA 1 cut(s) 578
XmiI GTMKAC 2 cut(s) 469, 504
XspI CTAG 6 cut(s) 81, 428, 438, 579, 606, 803
Zsp2I ATGCAT 1 cut(s) 1184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.