Rmu_sc0001726.1_g000008

Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001726.1
Physical Location & Seq
Reverse (-)
33464 .. 36515
3052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001726.1_g000008.1.cds

Sequence Viewer

Length: 1203 bp
atggcggggtcaacggcgaacctcagactccgcagccttgtatggtggagaaagtgggccagaaaggactgggcaatcgccaccctcgccttcaccgtcatcgtcttccttctcactctcatctccaactctttgcccgacgaaccagactcaagcgtcagcaaccccttccatccaaccaccgccgccgatttggtcgaattgactctgctgcacgacgccgaacgcagaggcgccctttgcttagatgggagtgctcccgggtaccatttccgaaaggggttcggatccggagccaaaaattggctgcttcacattgagggtggaggttggtgcaatacaatagagtcatgttcttttcggaaaaggactccattagggtcttccaagtacatggatcgtagagttccgttttccgggattttgagctctcagccgtcagaaaatcctgacttctttaactggaacaaagtcaaaatacggtactgtgatggcgcgtcttttgctggccaccccgaaaatgagcccaagaatggatcaaaactttactttaggggacagctcatctgggaagcacttatggatgaactcttgtcaattggcttgtcaaaggcgaaacgggcacttctttctggatgctctgccggtgggttggcaactcttatacactgtgatgactttcgaggtcttctacctagggattcaactgtcaaatgtcttgctgatgcaggtttttttctcgatgagaaagatgttaaccaaaactggaccatgagaactttttatcgtgatgttgtggttcttcaggatttagcaaaaagtttgcacaaggattgtgttgcaagaaaggaaccagctaagtgtctctttcctgaagaaattattaaacacgttagcactccagtgttcctcgtcaacccagcttatgatttttggcagatacaacatatcttgatacctgaagcatcagatccgcatggctactggaaaaagtgcaagctgaacatctataattgcaatcctagccagattgaaatactgcaaggtttccgtcgttctatgctaaatgcactgagcgaattccagaaaagcaaggtgggaggaacttttataaattcatgttttattcattgccagacatggttttctgagacatggcattcacccagttctccacgaataaacaataaggtgaggatctag

Protein Analysis

400

Amino Acids

45.19

Weight (kDa)

8.89

Isoelectric Point (pI)

48.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1112
AasI GACNNNNNNGTC 1 cut(s) 155
Acc36I ACCTGC 1 cut(s) 719
Acc65I GGTACC 1 cut(s) 264
AccB1I GGYRCC 2 cut(s) 233, 264
AccB7I CCANNNNNTGG 1 cut(s) 303
AccII CGCG 1 cut(s) 497
AccIII TCCGGA 1 cut(s) 290
AciI CCGC 5 cut(s) 5, 31, 183, 186, 974
AclWI GGATC 5 cut(s) 282, 295, 405, 544, 965
AcoI YGGCCR 1 cut(s) 508
AcsI RAATTY 2 cut(s) 1079, 1114
AcuI CTGAAG 3 cut(s) 788, 894, 981
AcyI GRCGYC 2 cut(s) 219, 234
AfaI GTAC 3 cut(s) 266, 392, 485
AfiI CCNNNNNNNGG 3 cut(s) 303, 416, 533
AflIII ACRYGT 1 cut(s) 889
AgsI TTSAA 2 cut(s) 705, 1034
AleI CACNNNNGTG 1 cut(s) 902
AluBI AGCT 5 cut(s) 429, 562, 857, 923, 1000
AluI AGCT 5 cut(s) 429, 562, 857, 923, 1000
Alw21I GWGCWC 2 cut(s) 259, 431
Alw26I GTCTC 2 cut(s) 869, 1145
AlwI GGATC 5 cut(s) 282, 295, 405, 544, 965
Ama87I CYCGRG 1 cut(s) 260
Aor13HI TCCGGA 1 cut(s) 290
AoxI GGCC 2 cut(s) 57, 508
ApeKI GCWGC 3 cut(s) 33, 211, 307
ApoI RAATTY 2 cut(s) 1079, 1114
Asp718I GGTACC 1 cut(s) 264
AspA2I CCTAGG 1 cut(s) 695
AspLEI GCGC 2 cut(s) 236, 497
AspS9I GGNCC 2 cut(s) 57, 768
AsuC2I CCSGG 3 cut(s) 261, 262, 418
AsuHPI GGTGA 2 cut(s) 85, 1155
AvaI CYCGRG 1 cut(s) 260
AvaII GGWCC 1 cut(s) 768
AvrII CCTAGG 1 cut(s) 695
BaeGI GKGCMC 1 cut(s) 625
BalI TGGCCA 1 cut(s) 510
BamHI GGATCC 1 cut(s) 287
BanI GGYRCC 2 cut(s) 233, 264
BanII GRGCYC 2 cut(s) 431, 528
BbsI GAAGAC 3 cut(s) 97, 375, 680
Bbv12I GWGCWC 2 cut(s) 259, 431
BbvI GCAGC 3 cut(s) 45, 198, 294
BccI CCATC 3 cut(s) 180, 242, 485
BceAI ACGGC 2 cut(s) 30, 421
BcnI CCSGG 3 cut(s) 261, 262, 418
BcoDI GTCTC 2 cut(s) 869, 1145
BfaI CTAG 3 cut(s) 696, 1023, 1201
BfoI RGCGCY 1 cut(s) 237
BfuAI ACCTGC 1 cut(s) 719
BisI GCNGC 4 cut(s) 34, 186, 212, 308
BlnI CCTAGG 1 cut(s) 695
BlsI GCNGC 4 cut(s) 35, 187, 213, 309
Bme1390I CCNGG 3 cut(s) 261, 262, 418
Bme18I GGWCC 1 cut(s) 768
BmeT110I CYCGRG 1 cut(s) 260
BmgT120I GGNCC 2 cut(s) 57, 768
BmiI GGNNCC 5 cut(s) 235, 266, 289, 295, 852
BmrFI CCNGG 3 cut(s) 261, 262, 418
BmrI ACTGGG 2 cut(s) 79, 1161
BmsI GCATC 3 cut(s) 626, 715, 974
BmuI ACTGGG 2 cut(s) 79, 1161
BpiI GAAGAC 3 cut(s) 97, 375, 680
BpmI CTGGAG 1 cut(s) 885
BpuEI CTTGAG 1 cut(s) 136
BpuMI CCSGG 3 cut(s) 261, 262, 418
BsaHI GRCGYC 2 cut(s) 219, 234
BsaJI CCNNGG 2 cut(s) 260, 695
BsaWI WCCGGW 1 cut(s) 290
Bsc4I CCNNNNNNNGG 3 cut(s) 303, 416, 533
Bse118I RCCGGY 1 cut(s) 644
Bse1I ACTGG 6 cut(s) 74, 467, 770, 902, 989, 1167
Bse3DI GCAATG 1 cut(s) 1129
BseAI TCCGGA 1 cut(s) 290
BseDI CCNNGG 2 cut(s) 260, 695
BseGI GGATG 3 cut(s) 172, 589, 641
BseLI CCNNNNNNNGG 3 cut(s) 303, 416, 533
BseMI GCAATG 1 cut(s) 1129
BseMII CTCAG 4 cut(s) 37, 446, 1064, 1140
BseNI ACTGG 6 cut(s) 74, 467, 770, 902, 989, 1167
BseSI GKGCMC 1 cut(s) 625
BseXI GCAGC 3 cut(s) 45, 198, 294
BseYI CCCAGC 1 cut(s) 919
BsgI GTGCAG 1 cut(s) 197
Bsh1236I CGCG 1 cut(s) 497
BshFI GGCC 2 cut(s) 59, 510
BshNI GGYRCC 2 cut(s) 233, 264
BsiHKAI GWGCWC 2 cut(s) 259, 431
BsiHKCI CYCGRG 1 cut(s) 260
BsiSI CCGG 4 cut(s) 261, 291, 417, 645
BslFI GGGAC 1 cut(s) 570
BslI CCNNNNNNNGG 3 cut(s) 303, 416, 533
BsmAI GTCTC 2 cut(s) 869, 1145
BsmFI GGGAC 1 cut(s) 570
BsmI GAATGC 1 cut(s) 1159
BsnI GGCC 2 cut(s) 59, 510
BsoBI CYCGRG 1 cut(s) 260
Bsp1286I GDGCHC 4 cut(s) 259, 431, 528, 625
Bsp13I TCCGGA 1 cut(s) 290
Bsp143I GATC 5 cut(s) 287, 397, 536, 970, 1197
BspACI CCGC 5 cut(s) 5, 31, 183, 186, 974
BspANI GGCC 2 cut(s) 59, 510
BspCNI CTCAG 4 cut(s) 36, 445, 1065, 1141
BspEI TCCGGA 1 cut(s) 290
BspFNI CGCG 1 cut(s) 497
BspLI GGNNCC 5 cut(s) 235, 266, 289, 295, 852
BspMI ACCTGC 1 cut(s) 719
BspPI GGATC 5 cut(s) 282, 295, 405, 544, 965
BspT107I GGYRCC 2 cut(s) 233, 264
BsrDI GCAATG 1 cut(s) 1129
BsrFI RCCGGY 1 cut(s) 644
BsrI ACTGG 6 cut(s) 74, 467, 770, 902, 989, 1167
BssAI RCCGGY 1 cut(s) 644
BssECI CCNNGG 2 cut(s) 260, 695
BssMI GATC 5 cut(s) 287, 397, 536, 970, 1197
BssNI GRCGYC 2 cut(s) 219, 234
BssT1I CCWWGG 1 cut(s) 695
Bst4CI ACNGT 5 cut(s) 97, 483, 488, 671, 709
BstACI GRCGYC 2 cut(s) 219, 234
BstC8I GCNNGC 2 cut(s) 508, 998
BstDEI CTNAG 6 cut(s) 23, 244, 432, 858, 1073, 1149
BstF5I GGATG 3 cut(s) 172, 589, 641
BstFNI CGCG 1 cut(s) 497
BstH2I RGCGCY 1 cut(s) 237
BstHHI GCGC 2 cut(s) 236, 497
BstKTI GATC 5 cut(s) 290, 400, 539, 973, 1200
BstMAI GTCTC 2 cut(s) 869, 1145
BstMBI GATC 5 cut(s) 287, 397, 536, 970, 1197
BstMWI GCNNNNNNNGC 5 cut(s) 86, 240, 503, 620, 1023
BstSCI CCNGG 3 cut(s) 259, 260, 416
BstSLI GKGCMC 1 cut(s) 625
BstUI CGCG 1 cut(s) 497
BstV1I GCAGC 3 cut(s) 45, 198, 294
BstV2I GAAGAC 3 cut(s) 97, 375, 680
BstX2I RGATCY 3 cut(s) 287, 970, 1197
BstXI CCANNNNNNTGG 1 cut(s) 394
BstYI RGATCY 3 cut(s) 287, 970, 1197
BsuRI GGCC 2 cut(s) 59, 510
BtsCI GGATG 3 cut(s) 172, 589, 641
BtsIMutI CAGTG 3 cut(s) 667, 909, 1070
BveI ACCTGC 1 cut(s) 719
Cac8I GCNNGC 2 cut(s) 508, 998
CfoI GCGC 2 cut(s) 236, 497
Cfr10I RCCGGY 1 cut(s) 644
Cfr13I GGNCC 2 cut(s) 57, 768
Cfr9I CCCGGG 1 cut(s) 260
CseI GACGC 3 cut(s) 145, 227, 486
Csp6I GTAC 3 cut(s) 265, 391, 484
CviAII CATG 7 cut(s) 351, 394, 772, 977, 1119, 1140, 1155
CviQI GTAC 3 cut(s) 265, 391, 484
DdeI CTNAG 6 cut(s) 23, 244, 432, 858, 1073, 1149
DinI GGCGCC 1 cut(s) 235
DpnI GATC 5 cut(s) 289, 399, 538, 972, 1199
DpnII GATC 5 cut(s) 287, 397, 536, 970, 1197
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EaeI YGGCCR 1 cut(s) 508
Ecl136II GAGCTC 1 cut(s) 429
Eco130I CCWWGG 1 cut(s) 695
Eco24I GRGCYC 2 cut(s) 431, 528
Eco47I GGWCC 1 cut(s) 768
Eco53kI GAGCTC 1 cut(s) 429
Eco57I CTGAAG 3 cut(s) 788, 894, 981
Eco88I CYCGRG 1 cut(s) 260
EcoICRI GAGCTC 1 cut(s) 429
EcoRI GAATTC 1 cut(s) 1079
EcoT14I CCWWGG 1 cut(s) 695
EcoT38I GRGCYC 2 cut(s) 431, 528
EgeI GGCGCC 1 cut(s) 235
EheI GGCGCC 1 cut(s) 235
ErhI CCWWGG 1 cut(s) 695
FaeI CATG 7 cut(s) 354, 397, 775, 980, 1122, 1143, 1158
FalI AAGNNNNNCTT 2 cut(s) 851, 883
FaqI GGGAC 1 cut(s) 570
FatI CATG 7 cut(s) 350, 393, 771, 976, 1118, 1139, 1154
Fnu4HI GCNGC 4 cut(s) 34, 186, 212, 308
FokI GGATG 3 cut(s) 159, 596, 648
FriOI GRGCYC 2 cut(s) 431, 528
Fsp4HI GCNGC 4 cut(s) 34, 186, 212, 308
FspBI CTAG 3 cut(s) 696, 1023, 1201
GlaI GCGC 2 cut(s) 235, 496
GluI GCNGC 4 cut(s) 34, 186, 212, 308
GsaI CCCAGC 1 cut(s) 923
GsuI CTGGAG 1 cut(s) 885
HaeII RGCGCY 1 cut(s) 237
HaeIII GGCC 2 cut(s) 59, 510
HapII CCGG 4 cut(s) 261, 291, 417, 645
HgaI GACGC 3 cut(s) 145, 227, 486
HhaI GCGC 2 cut(s) 236, 497
Hin1I GRCGYC 2 cut(s) 219, 234
Hin1II CATG 7 cut(s) 354, 397, 775, 980, 1122, 1143, 1158
Hin6I GCGC 2 cut(s) 234, 495
HinP1I GCGC 2 cut(s) 234, 495
HincII GTYRAC 3 cut(s) 12, 757, 916
HindII GTYRAC 3 cut(s) 12, 757, 916
HinfI GANTC 6 cut(s) 27, 149, 205, 347, 370, 701
HpaI GTTAAC 1 cut(s) 757
HpaII CCGG 4 cut(s) 261, 291, 417, 645
HphI GGTGA 2 cut(s) 85, 1155
Hpy166II GTNNAC 3 cut(s) 12, 757, 916
Hpy188I TCNGA 7 cut(s) 26, 275, 287, 363, 442, 970, 1150
Hpy188III TCNNGA 9 cut(s) 291, 449, 633, 740, 788, 806, 872, 952, 1084
Hpy8I GTNNAC 3 cut(s) 12, 757, 916
Hpy99I CGWCG 3 cut(s) 143, 221, 1056
HpyAV CCTTC 3 cut(s) 100, 119, 178
HpyCH4III ACNGT 5 cut(s) 97, 483, 488, 671, 709
HpyCH4IV ACGT 1 cut(s) 891
HpyCH4V TGCA 9 cut(s) 214, 336, 728, 826, 842, 996, 1017, 1042, 1070
HpyF10VI GCNNNNNNNGC 5 cut(s) 86, 240, 503, 620, 1023
HpyF3I CTNAG 6 cut(s) 23, 244, 432, 858, 1073, 1149
HpySE526I ACGT 1 cut(s) 891
Hsp92I GRCGYC 2 cut(s) 219, 234
Hsp92II CATG 7 cut(s) 354, 397, 775, 980, 1122, 1143, 1158
HspAI GCGC 2 cut(s) 234, 495
KasI GGCGCC 1 cut(s) 233
Kpn2I TCCGGA 1 cut(s) 290
KpnI GGTACC 1 cut(s) 268
KspAI GTTAAC 1 cut(s) 757
Kzo9I GATC 5 cut(s) 287, 397, 536, 970, 1197
LmnI GCTCC 2 cut(s) 262, 293
Lsp1109I GCAGC 3 cut(s) 45, 198, 294
LweI GCATC 3 cut(s) 626, 715, 974
MaeI CTAG 3 cut(s) 696, 1023, 1201
MaeII ACGT 1 cut(s) 891
MalI GATC 5 cut(s) 289, 399, 538, 972, 1199
MboI GATC 5 cut(s) 287, 397, 536, 970, 1197
MboII GAAGA 5 cut(s) 97, 375, 680, 794, 887
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 3 cut(s) 287, 970, 1197
MhlI GDGCHC 4 cut(s) 259, 431, 528, 625
MlsI TGGCCA 1 cut(s) 510
MluCI AATT 7 cut(s) 200, 301, 597, 879, 1012, 1079, 1114
MluNI TGGCCA 1 cut(s) 510
Mly113I GGCGCC 1 cut(s) 234
MlyI GAGTC 5 cut(s) 21, 143, 199, 356, 364
MmeI TCCRAC 2 cut(s) 150, 200
MnlI CCTC 9 cut(s) 32, 95, 224, 313, 320, 677, 920, 1094, 1188
Mox20I TGGCCA 1 cut(s) 510
MroI TCCGGA 1 cut(s) 290
MscI TGGCCA 1 cut(s) 510
MseI TTAA 3 cut(s) 459, 756, 885
MslI CAYNNNNRTG 2 cut(s) 672, 902
Msp20I TGGCCA 1 cut(s) 510
MspI CCGG 4 cut(s) 261, 291, 417, 645
MspR9I CCNGG 3 cut(s) 261, 262, 418
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 1 cut(s) 1159
MvnI CGCG 1 cut(s) 497
MwoI GCNNNNNNNGC 5 cut(s) 86, 240, 503, 620, 1023
NarI GGCGCC 1 cut(s) 234
NciI CCSGG 3 cut(s) 261, 262, 418
NdeII GATC 5 cut(s) 287, 397, 536, 970, 1197
NlaIII CATG 7 cut(s) 354, 397, 775, 980, 1122, 1143, 1158
NlaIV GGNNCC 5 cut(s) 235, 266, 289, 295, 852
OliI CACNNNNGTG 1 cut(s) 902
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PctI GAATGC 1 cut(s) 1159
PfeI GAWTC 1 cut(s) 701
PflMI CCANNNNNTGG 1 cut(s) 303
PfoI TCCNGGA 1 cut(s) 416
PkrI GCNGC 4 cut(s) 35, 187, 213, 309
PleI GAGTC 5 cut(s) 21, 143, 199, 355, 364
PluTI GGCGCC 1 cut(s) 237
PpsI GAGTC 5 cut(s) 21, 143, 199, 355, 364
PsiI TTATAA 1 cut(s) 1112
Psp124BI GAGCTC 1 cut(s) 431
PspFI CCCAGC 1 cut(s) 919
PspN4I GGNNCC 5 cut(s) 235, 266, 289, 295, 852
PspPI GGNCC 2 cut(s) 57, 768
PsuI RGATCY 3 cut(s) 287, 970, 1197
RsaI GTAC 3 cut(s) 266, 392, 485
RsaNI GTAC 3 cut(s) 265, 391, 484
RseI CAYNNNNRTG 2 cut(s) 672, 902
SacI GAGCTC 1 cut(s) 431
SaqAI TTAA 3 cut(s) 459, 756, 885
SatI GCNGC 4 cut(s) 34, 186, 212, 308
Sau3AI GATC 5 cut(s) 287, 397, 536, 970, 1197
Sau96I GGNCC 2 cut(s) 57, 768
SchI GAGTC 5 cut(s) 21, 143, 199, 356, 364
ScrFI CCNGG 3 cut(s) 261, 262, 418
SduI GDGCHC 4 cut(s) 259, 431, 528, 625
SfaNI GCATC 3 cut(s) 626, 715, 974
SfoI GGCGCC 1 cut(s) 235
SinI GGWCC 1 cut(s) 768
SmaI CCCGGG 1 cut(s) 262
SmiMI CAYNNNNRTG 2 cut(s) 672, 902
SmlI CTYRAG 1 cut(s) 151
SmoI CTYRAG 1 cut(s) 151
Sse9I AATT 7 cut(s) 200, 301, 597, 879, 1012, 1079, 1114
SsiI CCGC 5 cut(s) 5, 31, 183, 186, 974
SspDI GGCGCC 1 cut(s) 233
SspMI CTAG 3 cut(s) 696, 1023, 1201
SstI GAGCTC 1 cut(s) 431
StyD4I CCNGG 3 cut(s) 259, 260, 416
StyI CCWWGG 1 cut(s) 695
TaaI ACNGT 5 cut(s) 97, 483, 488, 671, 709
TaiI ACGT 1 cut(s) 894
TaqI TCGA 3 cut(s) 198, 682, 741
TasI AATT 7 cut(s) 200, 301, 597, 879, 1012, 1079, 1114
TatI WGTACW 1 cut(s) 390
TauI GCSGC 1 cut(s) 188
TfiI GAWTC 1 cut(s) 701
Tru1I TTAA 3 cut(s) 459, 756, 885
Tru9I TTAA 3 cut(s) 459, 756, 885
TscAI CASTG 3 cut(s) 674, 909, 1077
TseI GCWGC 3 cut(s) 33, 211, 307
TspDTI ATGAA 3 cut(s) 600, 1107, 1118
TspGWI ACGGA 2 cut(s) 399, 1040
TspMI CCCGGG 1 cut(s) 260
TspRI CASTG 3 cut(s) 674, 909, 1077
Van91I CCANNNNNTGG 1 cut(s) 303
VpaK11BI GGWCC 1 cut(s) 768
XapI RAATTY 2 cut(s) 1079, 1114
XmaI CCCGGG 1 cut(s) 260
XmaJI CCTAGG 1 cut(s) 695
XspI CTAG 3 cut(s) 696, 1023, 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.