Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008583.1

Orthogroup ID

OG0001758

Physical Location & Seq

Genomic Coordinates Forward (+)

25723 .. 30099

Gene Structure 4377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008583.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

atggcagggggttttggagcggcaacggggggcaaagaattcgaagcgaagatcaccacacttgtgatcatttcttgcataatggccgctactgggggccttatgtttggctacgatgttggcatttcagggggtgttacatcgatgcccgaatttctgaaggagttctttccagttgtctataaaaatcaacaaattccaggacttgcaggaaattactgcaaatacgataatcaagggctacaattgttcacatcttcattgtatcttgctgctttaatagcaaccttctttgcgtcatacacaactaaaacactaggtcgaaagattaccatgttgattgctgggaatttatttttagttggaacagcatttaatgctgcagctgtgaaccttccaatgcttattgttgggaggcttttacttggttgtggagttggttttgctaaccaggcaattccactatttctttctgagattgcacccacaagaattcgtggggcactcaatatactcttccagctcaatatcaccattggcattcttgttgcaaacttgatcaattacgggattccggcacttctgttaaccgtggggtctcttatggtggtagacactcctaacagtttgatcgcacgagtgactaacaagttttgtgcccatgccactagacttgcacacggatatggatggagaatatcgttgggtttggctgggattccggcacttctgttaaccgtggggtctcttatggtggtagacactcctaacagtttgatcgcacgaggtaaattggaggaaggaaaagaaattcttagaaggattcgtggtgctgataatgttgatccagaatactcagaaattgttgaggcaagtcgtgcggccgcagaagtgaaaaatcctttccaaaatctccttaagcgaaggaataggcctactctggtcattgcaattatgatgcagatcttccaacaattcacaggcatcaacgctatcatgttttatgctccagttttgttccaaaccttgggatttaagagtgatgcttccctatactcagctgttataactggactagtcaatgtcctctcaactcttgtatcagtcgtctttgtggataaagctggtcgccgaatgctcttgatcgaagctggggttcaaatgttcctttctcaaatgggagttgcaatagtgatgggactcaaagttaaggatcattcaaacaacctcggacatggcttgggagttcttgtgttggttttcgtatgcagctttgtggcatcatttgcatggtcgtggggacctcttgggtggttgatccctagtgagacattcgccgttgaagctcgctctgctggccaaagtgtggctgttagtactaacatgctcttcacatttgtcatagcacaggccttcctctcaatgctgtgtcacatgaagtttgggatatttattttcttctcgggttgggtcttggtcatgacactctttgcgatcttctttattcctgagaccaagaatatccccattgatgagatgaatgatcaagtgtggaagaaacactgggctcccgaaaaatcagagagagaccgaaacctaaacctaggtttcgcgagcagtgcggcggcgcttgttggctcctatctgcaacagggcgtttcggcgctgcaagaggtacgaggccaaggtttcatctccatcgtgggtagcggctgctttggccggaggaaagaggcgaagtacagattttactgtgggtttgcaaaccagaccgtcgtttgctttggtggcattgggcttgacgaggaggagatcggggccacggtttcgagactagcggacgagcgaggtcggagatttctgctttggtgggcggcgagatggttgccgtggtctcctgcctggggaggccaccagactgaaacggcggtggcgggcggcttcccggaagggccagagtcggctgctgggtgtgaggggcgtagggtgtgggtagtgggccttgggcctctgccttcctgggctgcagaaatgcagtctagtgaattgggtcatggttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005356 GO:0005358 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009651 GO:0009679 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030054 GO:0033993 GO:0034219 GO:0034220 GO:0042221 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:1901700 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

686

Amino Acids

74.18

Weight (kDa)

8.97

Isoelectric Point (pI)

32.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001758)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g02160 FvH4_3g02201 FvH4_6g30501
rosa_laevigata	RLG00000003283 RLG00000022003 RLG00000031100 RLG00000033725
rosa_multiflora	Rmu_sc0008583.1_g000006 Rmu_sc0008646.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072520 Rroxscaffold_1G00072530 Rroxscaffold_1G00072710 Rroxscaffold_1G00072740 Rroxscaffold_1G00072860 Rroxscaffold_1G00072900
rosa_rugosa	Rorug04G0396200 Rorug04G0401600 Rorug04G0402100
rosa_samantha	Rh5AG024600 Rh5AG025200 Rh5AG027200 Rh5AG027300 Rh5AG027700 Rh5BG028200 Rh5BG029500 Rh5CG026900 Rh5CG027600 Rh5CG028000 Rh5CG029600 Rh5CG030000 Rh5CG030400 Rh5DG026400 Rh5DG026500 Rh5DG026600 Rh5DG026700 Rh5DG026800 Rh5DG027100 Rh5DG027200 Rh5DG027300 Rh5DG027800 Rh5DG028400
rosa_wichuraiana	Rw5G002280 Rw5G002300 Rw5G002330 Rw5G002460 Rw5G002520 Rw5G002570 Rw5G002610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1067
AccB7I	CCANNNNNTGG	2 cut(s)	1027, 1366
AccBSI	CCGCTC	1 cut(s)	20
AccI	GTMKAC	2 cut(s)	612, 759
AccII	CGCG	1 cut(s)	1613
AclWI	GGATC	3 cut(s)	839, 1221, 1312
AcoI	YGGCCR	4 cut(s)	84, 882, 1357, 1720
AcsI	RAATTY	6 cut(s)	38, 152, 195, 349, 492, 810
AcuI	CTGAAG	1 cut(s)	179
AfaI	GTAC	3 cut(s)	1378, 1677, 1742
AfiI	CCNNNNNNNGG	4 cut(s)	93, 1027, 1366, 1904
AflII	CTTAAG	1 cut(s)	917
AgsI	TTSAA	3 cut(s)	1160, 1221, 1343
AhlI	ACTAGT	1 cut(s)	1075
AjnI	CCWGG	4 cut(s)	199, 450, 1901, 2018
AleI	CACNNNNGTG	1 cut(s)	62
AluBI	AGCT	7 cut(s)	386, 523, 1061, 1124, 1151, 1272, 1346
AluI	AGCT	7 cut(s)	386, 523, 1061, 1124, 1151, 1272, 1346
Alw26I	GTCTC	7 cut(s)	603, 750, 1322, 1505, 1581, 1825, 1899
AlwI	GGATC	3 cut(s)	839, 1221, 1312
Ama87I	CYCGRG	1 cut(s)	1462
ApeKI	GCWGC	8 cut(s)	272, 380, 383, 1269, 1666, 1713, 1964, 2024
ApoI	RAATTY	6 cut(s)	38, 152, 195, 349, 492, 810
Asp700I	GAANNNNTTC	1 cut(s)	164
AspA2I	CCTAGG	1 cut(s)	1603
AspLEI	GCGC	2 cut(s)	1630, 1666
AspS9I	GGNCC	6 cut(s)	97, 1301, 1818, 1952, 1999, 2006
AsuC2I	CCSGG	1 cut(s)	1946
AsuHPI	GGTGA	2 cut(s)	46, 523
AsuII	TTCGAA	1 cut(s)	42
AvaI	CYCGRG	1 cut(s)	1462
AvaII	GGWCC	1 cut(s)	1301
AvrII	CCTAGG	1 cut(s)	1603
BaeGI	GKGCMC	2 cut(s)	505, 661
BaeI	ACNNNNGTAYC	2 cut(s)	1083, 1116
BalI	TGGCCA	1 cut(s)	1359
BanII	GRGCYC	1 cut(s)	1570
BauI	CACGAG	2 cut(s)	636, 783
BbvI	GCAGC	8 cut(s)	259, 367, 395, 1281, 1653, 1700, 1951, 2011
BccI	CCATC	4 cut(s)	684, 1189, 1706, 1875
BceAI	ACGGC	3 cut(s)	1322, 1873, 1941
BcgI	CGANNNNNNTGC	4 cut(s)	22, 56, 1867, 1901
BciT130I	CCWGG	4 cut(s)	201, 452, 1903, 2020
BclI	TGATCA	3 cut(s)	66, 558, 1543
BcnI	CCSGG	1 cut(s)	1946
BcoDI	GTCTC	7 cut(s)	603, 750, 1322, 1505, 1581, 1825, 1899
BcuI	ACTAGT	1 cut(s)	1075
BfaI	CTAG	7 cut(s)	317, 669, 1076, 1323, 1604, 1835, 2040
BfmI	CTRYAG	2 cut(s)	381, 2025
BfoI	RGCGCY	2 cut(s)	1631, 1667
BfrI	CTTAAG	1 cut(s)	917
BglII	AGATCT	1 cut(s)	963
BlnI	CCTAGG	1 cut(s)	1603
BmcAI	AGTACT	1 cut(s)	1378
Bme1390I	CCNGG	5 cut(s)	201, 452, 1903, 1946, 2020
Bme18I	GGWCC	1 cut(s)	1301
BmeT110I	CYCGRG	1 cut(s)	1462
BmgT120I	GGNCC	6 cut(s)	97, 1301, 1818, 1952, 1999, 2006
BmiI	GGNNCC	5 cut(s)	98, 1302, 1569, 1639, 1819
BmrFI	CCNGG	5 cut(s)	201, 452, 1903, 1946, 2020
BmrI	ACTGGG	2 cut(s)	102, 1573
BmsI	GCATC	5 cut(s)	135, 948, 993, 1033, 1289
BmuI	ACTGGG	2 cut(s)	102, 1573
BpmI	CTGGAG	1 cut(s)	993
Bpu14I	TTCGAA	1 cut(s)	42
BpuMI	CCSGG	1 cut(s)	1946
Bsa29I	ATCGAT	1 cut(s)	143
BsaBI	GATNNNNATC	1 cut(s)	962
BsaI	GGTCTC	5 cut(s)	603, 750, 1505, 1581, 1899
BsaXI	ACNNNNNCTCC	2 cut(s)	1236, 1266
Bsc4I	CCNNNNNNNGG	4 cut(s)	93, 1027, 1366, 1904
Bse1I	ACTGG	5 cut(s)	97, 173, 1010, 1075, 1568
Bse3DI	GCAATG	1 cut(s)	945
Bse8I	GATNNNNATC	1 cut(s)	962
BseBI	CCWGG	4 cut(s)	201, 452, 1903, 2020
BseCI	ATCGAT	1 cut(s)	143
BseGI	GGATG	1 cut(s)	695
BseJI	GATNNNNATC	1 cut(s)	962
BseLI	CCNNNNNNNGG	4 cut(s)	93, 1027, 1366, 1904
BseMI	GCAATG	1 cut(s)	945
BseMII	CTCAG	4 cut(s)	465, 870, 1071, 1500
BseNI	ACTGG	5 cut(s)	97, 173, 1010, 1075, 1568
BseRI	GAGGAG	2 cut(s)	1820, 1823
BseSI	GKGCMC	2 cut(s)	505, 661
BseX3I	CGGCCG	1 cut(s)	882
BseXI	GCAGC	8 cut(s)	259, 367, 395, 1281, 1653, 1700, 1951, 2011
BseYI	CCCAGC	4 cut(s)	344, 713, 1151, 1967
Bsh1236I	CGCG	1 cut(s)	1613
Bsh1285I	CGRYCG	1 cut(s)	885
BshVI	ATCGAT	1 cut(s)	143
BsiEI	CGRYCG	1 cut(s)	885
BsiHKCI	CYCGRG	1 cut(s)	1462
BsiSI	CCGG	4 cut(s)	575, 722, 1723, 1946
BslFI	GGGAC	2 cut(s)	1212, 1314
BslI	CCNNNNNNNGG	4 cut(s)	93, 1027, 1366, 1904
BsmAI	GTCTC	7 cut(s)	603, 750, 1322, 1505, 1581, 1825, 1899
BsmFI	GGGAC	2 cut(s)	1212, 1314
BsmI	GAATGC	2 cut(s)	540, 1140
Bso31I	GGTCTC	5 cut(s)	603, 750, 1505, 1581, 1899
BsoBI	CYCGRG	1 cut(s)	1462
Bsp119I	TTCGAA	1 cut(s)	42
Bsp1286I	GDGCHC	3 cut(s)	505, 661, 1570
Bsp68I	TCGCGA	1 cut(s)	1613
BspCNI	CTCAG	4 cut(s)	466, 869, 1070, 1501
BspDI	ATCGAT	1 cut(s)	143
BspFNI	CGCG	1 cut(s)	1613
BspHI	TCATGA	1 cut(s)	1479
BspLI	GGNNCC	5 cut(s)	98, 1302, 1569, 1639, 1819
BspMAI	CTGCAG	2 cut(s)	385, 2029
BspPI	GGATC	3 cut(s)	839, 1221, 1312
BspQI	GCTCTTC	1 cut(s)	1394
BspT104I	TTCGAA	1 cut(s)	42
BspTI	CTTAAG	1 cut(s)	917
BspTNI	GGTCTC	5 cut(s)	603, 750, 1505, 1581, 1899
BsrBI	CCGCTC	1 cut(s)	20
BsrDI	GCAATG	1 cut(s)	945
BsrI	ACTGG	5 cut(s)	97, 173, 1010, 1075, 1568
BssSI	CACGAG	2 cut(s)	636, 783
BssT1I	CCWWGG	4 cut(s)	1026, 1603, 1684, 2002
Bst2BI	CACGAG	2 cut(s)	636, 783
Bst2UI	CCWGG	4 cut(s)	201, 452, 1903, 2020
Bst4CI	ACNGT	7 cut(s)	592, 626, 739, 773, 1754, 1774, 1825
Bst6I	CTCTTC	2 cut(s)	521, 1394
BstAFI	CTTAAG	1 cut(s)	917
BstAPI	GCANNNNNTGC	3 cut(s)	377, 878, 1286
BstBI	TTCGAA	1 cut(s)	42
BstC8I	GCNNGC	4 cut(s)	1348, 1357, 1615, 1936
BstDEI	CTNAG	5 cut(s)	474, 815, 856, 1057, 1509
BstDSI	CCRYGG	4 cut(s)	591, 738, 1821, 1889
BstF5I	GGATG	1 cut(s)	695
BstFNI	CGCG	1 cut(s)	1613
BstH2I	RGCGCY	2 cut(s)	1631, 1667
BstHHI	GCGC	2 cut(s)	1630, 1666
BstMAI	GTCTC	7 cut(s)	603, 750, 1322, 1505, 1581, 1825, 1899
BstMCI	CGRYCG	1 cut(s)	885
BstNI	CCWGG	4 cut(s)	201, 452, 1903, 2020
BstNSI	RCATGY	1 cut(s)	1387
BstSCI	CCNGG	5 cut(s)	199, 450, 1901, 1944, 2018
BstSFI	CTRYAG	2 cut(s)	381, 2025
BstSLI	GKGCMC	2 cut(s)	505, 661
BstUI	CGCG	1 cut(s)	1613
BstV1I	GCAGC	8 cut(s)	259, 367, 395, 1281, 1653, 1700, 1951, 2011
BstX2I	RGATCY	1 cut(s)	963
BstYI	RGATCY	1 cut(s)	963
BstZI	CGGCCG	1 cut(s)	882
Bsu15I	ATCGAT	1 cut(s)	143
BsuTUI	ATCGAT	1 cut(s)	143
BtgI	CCRYGG	4 cut(s)	591, 738, 1821, 1889
BtsCI	GGATG	1 cut(s)	695
BtsI	GCAGTG	1 cut(s)	1624
BtsIMutI	CAGTG	2 cut(s)	1561, 1624
BtuMI	TCGCGA	1 cut(s)	1613
Cac8I	GCNNGC	4 cut(s)	1348, 1357, 1615, 1936
CciI	TCATGA	1 cut(s)	1479
CciNI	GCGGCCGC	1 cut(s)	882
CfoI	GCGC	2 cut(s)	1630, 1666
Cfr13I	GGNCC	6 cut(s)	97, 1301, 1818, 1952, 1999, 2006
ClaI	ATCGAT	1 cut(s)	143
CseI	GACGC	1 cut(s)	285
Csp6I	GTAC	3 cut(s)	1377, 1676, 1741
CspCI	CAANNNNNGTGG	2 cut(s)	655, 690
CviAII	CATG	9 cut(s)	334, 662, 997, 1235, 1290, 1384, 1435, 1480, 2054
CviQI	GTAC	3 cut(s)	1377, 1676, 1741
DdeI	CTNAG	5 cut(s)	474, 815, 856, 1057, 1509
EaeI	YGGCCR	4 cut(s)	84, 882, 1357, 1720
EagI	CGGCCG	1 cut(s)	882
Eam1104I	CTCTTC	2 cut(s)	521, 1394
EarI	CTCTTC	2 cut(s)	521, 1394
EclXI	CGGCCG	1 cut(s)	882
Eco130I	CCWWGG	4 cut(s)	1026, 1603, 1684, 2002
Eco147I	AGGCCT	2 cut(s)	934, 1412
Eco24I	GRGCYC	1 cut(s)	1570
Eco31I	GGTCTC	5 cut(s)	603, 750, 1505, 1581, 1899
Eco47I	GGWCC	1 cut(s)	1301
Eco52I	CGGCCG	1 cut(s)	882
Eco57I	CTGAAG	1 cut(s)	179
Eco88I	CYCGRG	1 cut(s)	1462
EcoO109I	RGGNCCY	2 cut(s)	97, 1301
EcoRI	GAATTC	2 cut(s)	38, 492
EcoRII	CCWGG	4 cut(s)	199, 450, 1901, 2018
EcoT14I	CCWWGG	4 cut(s)	1026, 1603, 1684, 2002
EcoT38I	GRGCYC	1 cut(s)	1570
ErhI	CCWWGG	4 cut(s)	1026, 1603, 1684, 2002
FaeI	CATG	9 cut(s)	337, 665, 1000, 1238, 1293, 1387, 1438, 1483, 2057
FalI	AAGNNNNNCTT	4 cut(s)	152, 184, 798, 830
FaqI	GGGAC	2 cut(s)	1212, 1314
FatI	CATG	9 cut(s)	333, 661, 996, 1234, 1289, 1383, 1434, 1479, 2053
FauI	CCCGC	1 cut(s)	1927
FbaI	TGATCA	3 cut(s)	66, 558, 1543
FblI	GTMKAC	2 cut(s)	612, 759
FokI	GGATG	1 cut(s)	702
FriOI	GRGCYC	1 cut(s)	1570
FspBI	CTAG	7 cut(s)	317, 669, 1076, 1323, 1604, 1835, 2040
GlaI	GCGC	2 cut(s)	1629, 1665
GsaI	CCCAGC	4 cut(s)	348, 717, 1155, 1971
GsuI	CTGGAG	1 cut(s)	993
HaeII	RGCGCY	2 cut(s)	1631, 1667
HapII	CCGG	4 cut(s)	575, 722, 1723, 1946
HgaI	GACGC	1 cut(s)	285
HhaI	GCGC	2 cut(s)	1630, 1666
Hin1II	CATG	9 cut(s)	337, 665, 1000, 1238, 1293, 1387, 1438, 1483, 2057
Hin6I	GCGC	2 cut(s)	1628, 1664
HinP1I	GCGC	2 cut(s)	1628, 1664
HincII	GTYRAC	2 cut(s)	588, 735
HindII	GTYRAC	2 cut(s)	588, 735
HinfI	GANTC	5 cut(s)	571, 718, 823, 1200, 1958
HpaI	GTTAAC	2 cut(s)	588, 735
HpaII	CCGG	4 cut(s)	575, 722, 1723, 1946
HphI	GGTGA	2 cut(s)	46, 523
Hpy166II	GTNNAC	6 cut(s)	252, 391, 588, 613, 735, 760
Hpy188I	TCNGA	6 cut(s)	159, 475, 859, 1232, 1582, 1854
Hpy188III	TCNNGA	7 cut(s)	848, 1141, 1480, 1508, 1571, 1612, 1830
Hpy8I	GTNNAC	6 cut(s)	252, 391, 588, 613, 735, 760
Hpy99I	CGWCG	1 cut(s)	1778
HpyAV	CCTTC	9 cut(s)	154, 298, 404, 794, 813, 918, 1423, 1943, 2025
HpyCH4III	ACNGT	7 cut(s)	592, 626, 739, 773, 1754, 1774, 1825
HpyF3I	CTNAG	5 cut(s)	474, 815, 856, 1057, 1509
Hsp92II	CATG	9 cut(s)	337, 665, 1000, 1238, 1293, 1387, 1438, 1483, 2057
HspAI	GCGC	2 cut(s)	1628, 1664
Ksp22I	TGATCA	3 cut(s)	66, 558, 1543
KspAI	GTTAAC	2 cut(s)	588, 735
LguI	GCTCTTC	1 cut(s)	1394
LmnI	GCTCC	4 cut(s)	17, 1012, 1573, 1643
Lsp1109I	GCAGC	8 cut(s)	259, 367, 395, 1281, 1653, 1700, 1951, 2011
LweI	GCATC	5 cut(s)	135, 948, 993, 1033, 1289
MaeI	CTAG	7 cut(s)	317, 669, 1076, 1323, 1604, 1835, 2040
MaeIII	GTNAC	3 cut(s)	136, 640, 1430
MbiI	CCGCTC	1 cut(s)	20
MboII	GAAGA	8 cut(s)	61, 249, 508, 958, 1381, 1450, 1489, 1567
MfeI	CAATTG	1 cut(s)	245
MflI	RGATCY	1 cut(s)	963
MhlI	GDGCHC	3 cut(s)	505, 661, 1570
MlsI	TGGCCA	1 cut(s)	1359
MluNI	TGGCCA	1 cut(s)	1359
MlyI	GAGTC	2 cut(s)	1194, 1967
MmeI	TCCRAC	3 cut(s)	343, 994, 1832
Mox20I	TGGCCA	1 cut(s)	1359
MroXI	GAANNNNTTC	1 cut(s)	164
MscI	TGGCCA	1 cut(s)	1359
MseI	TTAA	7 cut(s)	278, 375, 587, 734, 918, 1035, 1209
MslI	CAYNNNNRTG	4 cut(s)	62, 684, 1288, 1294
Msp20I	TGGCCA	1 cut(s)	1359
MspA1I	CMGCKG	2 cut(s)	386, 1061
MspCI	CTTAAG	1 cut(s)	917
MspI	CCGG	4 cut(s)	575, 722, 1723, 1946
MspR9I	CCNGG	5 cut(s)	201, 452, 1903, 1946, 2020
MunI	CAATTG	1 cut(s)	245
Mva1269I	GAATGC	2 cut(s)	540, 1140
MvaI	CCWGG	4 cut(s)	201, 452, 1903, 2020
MvnI	CGCG	1 cut(s)	1613
NciI	CCSGG	1 cut(s)	1946
NlaIII	CATG	9 cut(s)	337, 665, 1000, 1238, 1293, 1387, 1438, 1483, 2057
NlaIV	GGNNCC	5 cut(s)	98, 1302, 1569, 1639, 1819
NmuCI	GTSAC	2 cut(s)	640, 1430
NotI	GCGGCCGC	1 cut(s)	882
NruI	TCGCGA	1 cut(s)	1613
NspI	RCATGY	1 cut(s)	1387
NspV	TTCGAA	1 cut(s)	42
OliI	CACNNNNGTG	1 cut(s)	62
PagI	TCATGA	1 cut(s)	1479
PceI	AGGCCT	2 cut(s)	934, 1412
PciSI	GCTCTTC	1 cut(s)	1394
PctI	GAATGC	2 cut(s)	540, 1140
PdmI	GAANNNNTTC	1 cut(s)	164
PfeI	GAWTC	3 cut(s)	571, 718, 823
PflMI	CCANNNNNTGG	2 cut(s)	1027, 1366
PfoI	TCCNGGA	2 cut(s)	199, 1944
PleI	GAGTC	2 cut(s)	1194, 1966
PpsI	GAGTC	2 cut(s)	1194, 1966
PpuMI	RGGWCCY	1 cut(s)	1301
PsiI	TTATAA	1 cut(s)	1067
Psp5II	RGGWCCY	1 cut(s)	1301
Psp6I	CCWGG	4 cut(s)	199, 450, 1901, 2018
PspFI	CCCAGC	4 cut(s)	344, 713, 1151, 1967
PspGI	CCWGG	4 cut(s)	199, 450, 1901, 2018
PspN4I	GGNNCC	5 cut(s)	98, 1302, 1569, 1639, 1819
PspPI	GGNCC	6 cut(s)	97, 1301, 1818, 1952, 1999, 2006
PspPPI	RGGWCCY	1 cut(s)	1301
PstI	CTGCAG	2 cut(s)	385, 2029
PsuI	RGATCY	1 cut(s)	963
PvuII	CAGCTG	2 cut(s)	386, 1061
RruI	TCGCGA	1 cut(s)	1613
RsaI	GTAC	3 cut(s)	1378, 1677, 1742
RsaNI	GTAC	3 cut(s)	1377, 1676, 1741
RseI	CAYNNNNRTG	4 cut(s)	62, 684, 1288, 1294
SapI	GCTCTTC	1 cut(s)	1394
SaqAI	TTAA	7 cut(s)	278, 375, 587, 734, 918, 1035, 1209
Sau96I	GGNCC	6 cut(s)	97, 1301, 1818, 1952, 1999, 2006
ScaI	AGTACT	1 cut(s)	1378
SchI	GAGTC	2 cut(s)	1194, 1967
ScrFI	CCNGG	5 cut(s)	201, 452, 1903, 1946, 2020
SduI	GDGCHC	3 cut(s)	505, 661, 1570
SfaNI	GCATC	5 cut(s)	135, 948, 993, 1033, 1289
SfcI	CTRYAG	2 cut(s)	381, 2025
SfuI	TTCGAA	1 cut(s)	42
SinI	GGWCC	1 cut(s)	1301
SmiMI	CAYNNNNRTG	4 cut(s)	62, 684, 1288, 1294
SmlI	CTYRAG	1 cut(s)	917
SmoI	CTYRAG	1 cut(s)	917
SpeI	ACTAGT	1 cut(s)	1075
SseBI	AGGCCT	2 cut(s)	934, 1412
SspMI	CTAG	7 cut(s)	317, 669, 1076, 1323, 1604, 1835, 2040
StuI	AGGCCT	2 cut(s)	934, 1412
StyD4I	CCNGG	5 cut(s)	199, 450, 1901, 1944, 2018
StyI	CCWWGG	4 cut(s)	1026, 1603, 1684, 2002
TaaI	ACNGT	7 cut(s)	592, 626, 739, 773, 1754, 1774, 1825
TaqI	TCGA	5 cut(s)	42, 143, 322, 1146, 1829
TaqII	GACCGA	1 cut(s)	1605
TatI	WGTACW	2 cut(s)	1376, 1740
TauI	GCSGC	9 cut(s)	23, 89, 884, 887, 1625, 1628, 1713, 1877, 1941
TfiI	GAWTC	3 cut(s)	571, 718, 823
Tru1I	TTAA	7 cut(s)	278, 375, 587, 734, 918, 1035, 1209
Tru9I	TTAA	7 cut(s)	278, 375, 587, 734, 918, 1035, 1209
TscAI	CASTG	2 cut(s)	1568, 1624
TseFI	GTSAC	2 cut(s)	640, 1430
TseI	GCWGC	8 cut(s)	272, 380, 383, 1269, 1666, 1713, 1964, 2024
Tsp45I	GTSAC	2 cut(s)	640, 1430
TspDTI	ATGAA	4 cut(s)	249, 1451, 1553, 1681
TspGWI	ACGGA	1 cut(s)	696
TspRI	CASTG	2 cut(s)	1568, 1624
Van91I	CCANNNNNTGG	2 cut(s)	1027, 1366
Vha464I	CTTAAG	1 cut(s)	917
VpaK11BI	GGWCC	1 cut(s)	1301
XapI	RAATTY	6 cut(s)	38, 152, 195, 349, 492, 810
XceI	RCATGY	1 cut(s)	1387
XmaJI	CCTAGG	1 cut(s)	1603
XmiI	GTMKAC	2 cut(s)	612, 759
XmnI	GAANNNNTTC	1 cut(s)	164
XspI	CTAG	7 cut(s)	317, 669, 1076, 1323, 1604, 1835, 2040
ZrmI	AGTACT	1 cut(s)	1378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.