Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0023940.1

Orthogroup ID

OG0001380

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 8682

Gene Structure 8682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0023940.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1892 bp

atgccgaaacagttcaaaatgaagacgattttggcctcgaaggtcatgggatatcctggatggcgtcaccatcaaggtgaaggcaaaggtcatcgaggtcgaaggtccctgcgggaagctcacctcaacttcaagctagtcaccgatgactccaccggtgagaagaagctcaagatcgaggcctggttcagcaccagcaagactagtgcccccatctgcacctccctcagccacgtcagcaacctcatcacctacatcaccaagggctaccactatgagataactgcagggccggacctgacacgaggcccaagatggaaaaacgtctccaaccattcccttccccatgccggaatcaaaagcccagacgcagatagaaaaattccgatcggatccaacccatatcaggccagattgcgccgagccaagcaacgtcaccacaatcccatcaactccagtccaccaccgaatctacgccgacacaccgatcctaacccccagccagcaagaaaagaaccatcaccggccaacagacatgatctgctctaccatcccaccgatcctaatcaattccagattcgttttcaggcggagaaagaatcgccggcgctgcaagtctcaggatctggcactgaagcttgcgagcatgggggcaatggggcagcggtgcttggtgctggagcagaagatcgcggcccaaagcttcaagatctaggcgctccggtcggatatcgagtttgttcatccccagtcgctttttttccgtcatcggtcgccggatttcggttaccggttcccgaaatccggtcattggtcgccggaatccggtcaccgttcgccggaatccggtcgccggagaccgcgccggccactggtcaccggagcacagcaaggtggaagcgatcggagaaggtgaaggatgagctggttttggacgggaatgacatcgagttggtttcaaggtcggcggcgctgatcaaccagaagtgtcatgtgaagaagaaggacatcaagaagtttctgaatgggatctacgtcagcgagagaagcaccattgccatcgagatgaatgaagaaggatcgattagtccagatgaagtagtttccaacattgagtccaagattgctgcatggaccttccttccaattgagaatggggaggcaatgcagatactgcactatgaaaatggtcaaaagtatgagccacatttcgattattttcatgacaaagctaatcaagaattgggtggccaccgtgttgccactgtattgatgtatctctctaatgttgaaaagggtggggaaacagtctttcctcatgcgcaggtgaaaacggttgaagccaaggatgaggtcttgtctgattgtgcaaaaaatggctattctgtgaaaccattcaagggtgatgccttgctgttcttcagtcttcttcctaatgccacaaccgatccaaacagtttgcatgggagctgccctgtcattgagggtgagaaatggtccgcaaccaagtggattcatgtgagatccttcgaagattcaatcaggcagggaactagcggggggtgcaaggatcagaatgcaaactgctttacatgggcaaaagccggtgaatgtgagaagaatcctgtatacatggtgggttcagaggatcttcccgggttttgtaggaagagttgcaagccgaggatgcgaaacttcttgcttgcgtatccaaacatggagtcggaaattggactgtggttcctaagaaagcaggttgaaagattgaacagatgtgggaagagctgcaggcttaggtggactaattacctcaggcctgacctcaagcatgacaccttcactcctgaagaggaagagcatattatcaaccttcataaggctataggaagcag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004656 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009790 GO:0009792 GO:0009987 GO:0010171 GO:0010172 GO:0012505 GO:0016491 GO:0016705 GO:0016706 GO:0018126 GO:0018193 GO:0018208 GO:0018996 GO:0019511 GO:0019538 GO:0019798 GO:0031543 GO:0031545 GO:0031974 GO:0032501 GO:0032502 GO:0036211 GO:0040002 GO:0040008 GO:0040014 GO:0040018 GO:0042303 GO:0042335 GO:0042338 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045927 GO:0048518 GO:0048598 GO:0048638 GO:0048639 GO:0048856 GO:0050789 GO:0050793 GO:0051094 GO:0051213 GO:0051239 GO:0051240 GO:0055114 GO:0065007 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00330 ko01100 map00330 map01100

Pfam Domains

Protein Families

2OG-FeII_Oxy_3 ShK

Protein Analysis

630

Amino Acids

70.33

Weight (kDa)

9.17

Isoelectric Point (pI)

55.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33120 AT1G33140 AT4G10450 AT4G10450
fragaria_vesca	FvH4_5g10230 FvH4_7g33110
malus_domestica	MD01G1230300.v1.1 MD07G1302000.v1.1 MD16G1260300.v1.1
prunus_persica	Prupe.2G321000_v2.0.a1 Prupe.5G136400_v2.0.a1
pyrus_communis	pycom01g23830 pycom07g09170 pycom07g27520 pycom12g07060
rosa_chinensis	RchiOBHm_Chr1g0334541 RchiOBHm_Chr1g0334651 RchiOBHm_Chr1g0383161 RchiOBHm_Chr2g0169651 RchiOBHm_Chr3g0462551 RchiOBHm_Chr7g0187991
rosa_laevigata	RLG00000004736 RLG00000026125
rosa_multiflora	Rmu_sc0003624.1_g000019 Rmu_sc0005044.1_g000024 Rmu_sc0008563.1_g000005 Rmu_sc0013280.1_g000007 Rmu_sc0023940.1_g000001
rosa_roxburghii	Rroxscaffold_2G00081920 Rroxscaffold_3G00266830 Rroxscaffold_4G00277530
rosa_rugosa	Rorug01G0126100 Rorug01G0439300
rosa_samantha	Rh1AG139700 Rh1AG464900 Rh1BG422200 Rh1CG131600 Rh1CG435500 Rh1DG143700 Rh1DG153800 Rh1DG454900 Rh3AG115500 Rh3BG118900 Rh3CG122300 Rh7AG091500 Rh7BG093000 Rh7CG092300 Rh7DG093700
rosa_wichuraiana	Rw1G009540 Rw1G009550 Rw2G050900 Rw3G009780 Rw7G007890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1315
Acc16I	TGCGCA	1 cut(s)	1323
Acc36I	ACCTGC	2 cut(s)	1315, 1744
AccI	GTMKAC	1 cut(s)	1629
AccII	CGCG	2 cut(s)	693, 863
AciI	CCGC	8 cut(s)	112, 590, 665, 693, 861, 968, 1500, 1557
AcoI	YGGCCR	3 cut(s)	525, 867, 1249
AcsI	RAATTY	1 cut(s)	381
AcuI	CTGAAG	3 cut(s)	654, 1405, 1866
AcyI	GRCGYC	1 cut(s)	64
AgeI	ACCGGT	2 cut(s)	155, 790
AhlI	ACTAGT	1 cut(s)	203
AjiI	CACGTC	1 cut(s)	235
AjnI	CCWGG	2 cut(s)	55, 182
AjuI	GAANNNNNNNTTGG	2 cut(s)	14, 46
AluBI	AGCT	9 cut(s)	119, 136, 169, 638, 703, 925, 1232, 1470, 1785
AluI	AGCT	9 cut(s)	119, 136, 169, 638, 703, 925, 1232, 1470, 1785
Alw21I	GWGCWC	1 cut(s)	887
Alw26I	GTCTC	3 cut(s)	331, 622, 851
AlwNI	CAGNNNCTG	2 cut(s)	626, 1174
Ama87I	CYCGRG	1 cut(s)	1655
ApeKI	GCWGC	5 cut(s)	610, 662, 1127, 1470, 1785
ApoI	RAATTY	1 cut(s)	381
ArsI	GACNNNNNNTTYG	2 cut(s)	1706, 1738
AsiGI	ACCGGT	2 cut(s)	155, 790
Asp700I	GAANNNNTTC	2 cut(s)	11, 1394
AspLEI	GCGC	6 cut(s)	420, 610, 719, 865, 973, 1324
AspS9I	GGNCC	7 cut(s)	105, 290, 295, 308, 695, 1134, 1497
AsuC2I	CCSGG	2 cut(s)	1656, 1657
AsuII	TTCGAA	1 cut(s)	1530
AvaI	CYCGRG	1 cut(s)	1655
AvaII	GGWCC	4 cut(s)	105, 295, 1134, 1497
AxyI	CCTNAGG	1 cut(s)	1811
BaeGI	GKGCMC	1 cut(s)	211
BalI	TGGCCA	1 cut(s)	1251
BamHI	GGATCC	1 cut(s)	392
BauI	CACGAG	1 cut(s)	303
BbsI	GAAGAC	2 cut(s)	29, 1418
Bbv12I	GWGCWC	1 cut(s)	887
BbvCI	CCTCAGC	1 cut(s)	227
BbvI	GCAGC	5 cut(s)	597, 674, 1114, 1457, 1772
BccI	CCATC	8 cut(s)	54, 78, 221, 309, 455, 526, 558, 1067
BciT130I	CCWGG	2 cut(s)	57, 184
BciVI	GTATCC	1 cut(s)	1719
BclI	TGATCA	1 cut(s)	975
BcnI	CCSGG	2 cut(s)	1656, 1657
BcoDI	GTCTC	3 cut(s)	331, 622, 851
BcuI	ACTAGT	1 cut(s)	203
BfaI	CTAG	4 cut(s)	137, 204, 713, 1554
BfmI	CTRYAG	3 cut(s)	285, 1786, 1881
BfoI	RGCGCY	3 cut(s)	611, 720, 974
BfuAI	ACCTGC	2 cut(s)	1315, 1744
BfuI	GTATCC	1 cut(s)	1719
BglII	AGATCT	1 cut(s)	709
BisI	GCNGC	7 cut(s)	611, 663, 694, 969, 1128, 1471, 1786
BlsI	GCNGC	7 cut(s)	612, 664, 695, 970, 1129, 1472, 1787
Bme1390I	CCNGG	4 cut(s)	57, 184, 1656, 1657
Bme18I	GGWCC	4 cut(s)	105, 295, 1134, 1497
BmeT110I	CYCGRG	1 cut(s)	1655
BmgBI	CACGTC	1 cut(s)	235
BmgT120I	GGNCC	7 cut(s)	105, 290, 295, 308, 695, 1134, 1497
BmiI	GGNNCC	4 cut(s)	107, 394, 795, 1742
BmrFI	CCNGG	4 cut(s)	57, 184, 1656, 1657
BmrI	ACTGGG	1 cut(s)	743
BmsI	GCATC	2 cut(s)	1396, 1677
BmuI	ACTGGG	1 cut(s)	743
BpiI	GAAGAC	2 cut(s)	29, 1418
BpmI	CTGGAG	2 cut(s)	439, 699
Bpu10I	CCTNAGC	2 cut(s)	227, 1793
Bpu14I	TTCGAA	1 cut(s)	1530
BpuEI	CTTGAG	2 cut(s)	155, 1808
BpuMI	CCSGG	2 cut(s)	1656, 1657
Bsa29I	ATCGAT	1 cut(s)	1082
BsaBI	GATNNNNATC	1 cut(s)	564
BsaHI	GRCGYC	1 cut(s)	64
BsaI	GGTCTC	1 cut(s)	851
BsaJI	CCNNGG	4 cut(s)	261, 1344, 1655, 1682
BsaWI	WCCGGW	7 cut(s)	155, 721, 790, 804, 825, 846, 879
BsaXI	ACNNNNNCTCC	2 cut(s)	1825, 1855
Bse118I	RCCGGY	6 cut(s)	155, 523, 604, 790, 865, 1604
Bse1I	ACTGG	3 cut(s)	456, 749, 877
Bse21I	CCTNAGG	1 cut(s)	1811
Bse3DI	GCAATG	3 cut(s)	661, 1053, 1170
Bse8I	GATNNNNATC	1 cut(s)	564
BseBI	CCWGG	2 cut(s)	57, 184
BseCI	ATCGAT	1 cut(s)	1082
BseDI	CCNNGG	4 cut(s)	261, 1344, 1655, 1682
BseGI	GGATG	6 cut(s)	65, 550, 743, 925, 1354, 1692
BseJI	GATNNNNATC	1 cut(s)	564
BseMI	GCAATG	3 cut(s)	661, 1053, 1170
BseMII	CTCAG	3 cut(s)	241, 633, 1825
BseNI	ACTGG	3 cut(s)	456, 749, 877
BseSI	GKGCMC	1 cut(s)	211
BseXI	GCAGC	5 cut(s)	597, 674, 1114, 1457, 1772
BseYI	CCCAGC	1 cut(s)	498
BsgI	GTGCAG	2 cut(s)	202, 1160
Bsh1236I	CGCG	2 cut(s)	693, 863
Bsh1285I	CGRYCG	5 cut(s)	390, 726, 774, 851, 905
BshTI	ACCGGT	2 cut(s)	155, 790
BshVI	ATCGAT	1 cut(s)	1082
BsiEI	CGRYCG	5 cut(s)	390, 726, 774, 851, 905
BsiHKAI	GWGCWC	1 cut(s)	887
BsiHKCI	CYCGRG	1 cut(s)	1655
BslFI	GGGAC	1 cut(s)	91
BsmAI	GTCTC	3 cut(s)	331, 622, 851
BsmBI	CGTCTC	1 cut(s)	331
BsmFI	GGGAC	1 cut(s)	91
BsmI	GAATGC	1 cut(s)	1582
Bso31I	GGTCTC	1 cut(s)	851
BsoBI	CYCGRG	1 cut(s)	1655
Bsp119I	TTCGAA	1 cut(s)	1530
Bsp1286I	GDGCHC	2 cut(s)	211, 887
BspACI	CCGC	8 cut(s)	112, 590, 665, 693, 861, 968, 1500, 1557
BspCNI	CTCAG	3 cut(s)	240, 632, 1824
BspDI	ATCGAT	1 cut(s)	1082
BspFNI	CGCG	2 cut(s)	693, 863
BspHI	TCATGA	1 cut(s)	1222
BspLI	GGNNCC	4 cut(s)	107, 394, 795, 1742
BspMAI	CTGCAG	2 cut(s)	289, 1790
BspMI	ACCTGC	2 cut(s)	1315, 1744
BspQI	GCTCTTC	2 cut(s)	1775, 1848
BspT104I	TTCGAA	1 cut(s)	1530
BspTNI	GGTCTC	1 cut(s)	851
BsrDI	GCAATG	3 cut(s)	661, 1053, 1170
BsrFI	RCCGGY	6 cut(s)	155, 523, 604, 790, 865, 1604
BsrI	ACTGG	3 cut(s)	456, 749, 877
BssAI	RCCGGY	6 cut(s)	155, 523, 604, 790, 865, 1604
BssECI	CCNNGG	4 cut(s)	261, 1344, 1655, 1682
BssNAI	GTATAC	1 cut(s)	1630
BssNI	GRCGYC	1 cut(s)	64
BssSI	CACGAG	1 cut(s)	303
BssT1I	CCWWGG	2 cut(s)	261, 1344
Bst1107I	GTATAC	1 cut(s)	1630
Bst2BI	CACGAG	1 cut(s)	303
Bst2UI	CCWGG	2 cut(s)	57, 184
Bst4CI	ACNGT	8 cut(s)	12, 834, 1256, 1267, 1309, 1336, 1457, 1737
Bst6I	CTCTTC	4 cut(s)	1664, 1775, 1842, 1848
BstACI	GRCGYC	1 cut(s)	64
BstAPI	GCANNNNNTGC	1 cut(s)	1174
BstBI	TTCGAA	1 cut(s)	1530
BstC8I	GCNNGC	8 cut(s)	504, 606, 640, 644, 867, 1679, 1704, 1790
BstDEI	CTNAG	5 cut(s)	227, 619, 1745, 1793, 1811
BstEII	GGTNACC	3 cut(s)	786, 828, 875
BstENI	CCTNNNNNAGG	1 cut(s)	1874
BstF5I	GGATG	6 cut(s)	65, 550, 743, 925, 1354, 1692
BstFNI	CGCG	2 cut(s)	693, 863
BstH2I	RGCGCY	3 cut(s)	611, 720, 974
BstHHI	GCGC	6 cut(s)	420, 610, 719, 865, 973, 1324
BstMAI	GTCTC	3 cut(s)	331, 622, 851
BstMCI	CGRYCG	5 cut(s)	390, 726, 774, 851, 905
BstMWI	GCNNNNNNNGC	6 cut(s)	237, 610, 1047, 1174, 1563, 1687
BstNI	CCWGG	2 cut(s)	57, 184
BstPI	GGTNACC	3 cut(s)	786, 828, 875
BstSCI	CCNGG	4 cut(s)	55, 182, 1654, 1655
BstSFI	CTRYAG	3 cut(s)	285, 1786, 1881
BstSLI	GKGCMC	1 cut(s)	211
BstUI	CGCG	2 cut(s)	693, 863
BstV1I	GCAGC	5 cut(s)	597, 674, 1114, 1457, 1772
BstV2I	GAAGAC	2 cut(s)	29, 1418
BstX2I	RGATCY	6 cut(s)	392, 623, 709, 1029, 1523, 1648
BstYI	RGATCY	6 cut(s)	392, 623, 709, 1029, 1523, 1648
BstZ17I	GTATAC	1 cut(s)	1630
Bsu15I	ATCGAT	1 cut(s)	1082
Bsu36I	CCTNAGG	1 cut(s)	1811
BsuI	GTATCC	1 cut(s)	1719
BsuTUI	ATCGAT	1 cut(s)	1082
BtrI	CACGTC	1 cut(s)	235
BtsCI	GGATG	6 cut(s)	65, 550, 743, 925, 1354, 1692
BtsIMutI	CAGTG	3 cut(s)	630, 870, 1263
BveI	ACCTGC	2 cut(s)	1315, 1744
Cac8I	GCNNGC	8 cut(s)	504, 606, 640, 644, 867, 1679, 1704, 1790
CaiI	CAGNNNCTG	2 cut(s)	626, 1174
CciI	TCATGA	1 cut(s)	1222
CfoI	GCGC	6 cut(s)	420, 610, 719, 865, 973, 1324
Cfr10I	RCCGGY	6 cut(s)	155, 523, 604, 790, 865, 1604
Cfr13I	GGNCC	7 cut(s)	105, 290, 295, 308, 695, 1134, 1497
Cfr9I	CCCGGG	1 cut(s)	1655
ClaI	ATCGAT	1 cut(s)	1082
CseI	GACGC	2 cut(s)	53, 377
CspAI	ACCGGT	2 cut(s)	155, 790
DdeI	CTNAG	5 cut(s)	227, 619, 1745, 1793, 1811
EaeI	YGGCCR	3 cut(s)	525, 867, 1249
Eam1104I	CTCTTC	4 cut(s)	1664, 1775, 1842, 1848
EarI	CTCTTC	4 cut(s)	1664, 1775, 1842, 1848
EciI	GGCGGA	1 cut(s)	605
Eco130I	CCWWGG	2 cut(s)	261, 1344
Eco147I	AGGCCT	2 cut(s)	182, 1816
Eco31I	GGTCTC	1 cut(s)	851
Eco32I	GATATC	2 cut(s)	53, 731
Eco47I	GGWCC	4 cut(s)	105, 295, 1134, 1497
Eco57I	CTGAAG	3 cut(s)	654, 1405, 1866
Eco81I	CCTNAGG	1 cut(s)	1811
Eco88I	CYCGRG	1 cut(s)	1655
Eco91I	GGTNACC	3 cut(s)	786, 828, 875
EcoNI	CCTNNNNNAGG	1 cut(s)	1874
EcoO109I	RGGNCCY	1 cut(s)	105
EcoO65I	GGTNACC	3 cut(s)	786, 828, 875
EcoRII	CCWGG	2 cut(s)	55, 182
EcoRV	GATATC	2 cut(s)	53, 731
EcoT14I	CCWWGG	2 cut(s)	261, 1344
ErhI	CCWWGG	2 cut(s)	261, 1344
Esp3I	CGTCTC	1 cut(s)	331
FaqI	GGGAC	1 cut(s)	91
FauI	CCCGC	2 cut(s)	105, 1550
FbaI	TGATCA	1 cut(s)	975
FblI	GTMKAC	1 cut(s)	1629
Fnu4HI	GCNGC	7 cut(s)	611, 663, 694, 969, 1128, 1471, 1786
FokI	GGATG	6 cut(s)	72, 537, 730, 932, 1361, 1699
Fsp4HI	GCNGC	7 cut(s)	611, 663, 694, 969, 1128, 1471, 1786
FspBI	CTAG	4 cut(s)	137, 204, 713, 1554
FspI	TGCGCA	1 cut(s)	1323
GlaI	GCGC	6 cut(s)	419, 609, 718, 864, 972, 1323
GluI	GCNGC	7 cut(s)	611, 663, 694, 969, 1128, 1471, 1786
GsaI	CCCAGC	1 cut(s)	502
GsuI	CTGGAG	2 cut(s)	439, 699
HaeII	RGCGCY	3 cut(s)	611, 720, 974
HgaI	GACGC	2 cut(s)	53, 377
HhaI	GCGC	6 cut(s)	420, 610, 719, 865, 973, 1324
Hin1I	GRCGYC	1 cut(s)	64
Hin6I	GCGC	6 cut(s)	418, 608, 717, 863, 971, 1322
HinP1I	GCGC	6 cut(s)	418, 608, 717, 863, 971, 1322
HindIII	AAGCTT	2 cut(s)	636, 701
Hpy166II	GTNNAC	3 cut(s)	461, 1630, 1800
Hpy188I	TCNGA	9 cut(s)	387, 392, 728, 907, 1023, 1363, 1575, 1645, 1726
Hpy8I	GTNNAC	3 cut(s)	461, 1630, 1800
HpyCH4III	ACNGT	8 cut(s)	12, 834, 1256, 1267, 1309, 1336, 1457, 1737
HpyCH4IV	ACGT	4 cut(s)	234, 324, 433, 1035
HpyF10VI	GCNNNNNNNGC	6 cut(s)	237, 610, 1047, 1174, 1563, 1687
HpyF3I	CTNAG	5 cut(s)	227, 619, 1745, 1793, 1811
HpySE526I	ACGT	4 cut(s)	234, 324, 433, 1035
Hsp92I	GRCGYC	1 cut(s)	64
HspAI	GCGC	6 cut(s)	418, 608, 717, 863, 971, 1322
KroI	GCCGGC	2 cut(s)	604, 865
KroNI	GCCGGC	2 cut(s)	606, 867
Ksp22I	TGATCA	1 cut(s)	975
LguI	GCTCTTC	2 cut(s)	1775, 1848
LmnI	GCTCC	4 cut(s)	680, 724, 882, 1467
Lsp1109I	GCAGC	5 cut(s)	597, 674, 1114, 1457, 1772
LweI	GCATC	2 cut(s)	1396, 1677
MaeI	CTAG	4 cut(s)	137, 204, 713, 1554
MaeII	ACGT	4 cut(s)	234, 324, 433, 1035
MaeIII	GTNAC	6 cut(s)	65, 139, 434, 786, 828, 875
MfeI	CAATTG	1 cut(s)	1146
MflI	RGATCY	6 cut(s)	392, 623, 709, 1029, 1523, 1648
MhlI	GDGCHC	2 cut(s)	211, 887
MlsI	TGGCCA	1 cut(s)	1251
MluCI	AATT	6 cut(s)	381, 569, 1146, 1241, 1728, 1804
MluNI	TGGCCA	1 cut(s)	1251
MlyI	GAGTC	3 cut(s)	143, 1124, 1730
MmeI	TCCRAC	5 cut(s)	354, 420, 706, 1131, 1704
Mox20I	TGGCCA	1 cut(s)	1251
MreI	CGCCGGCG	1 cut(s)	604
MroNI	GCCGGC	2 cut(s)	604, 865
MroXI	GAANNNNTTC	2 cut(s)	11, 1394
MscI	TGGCCA	1 cut(s)	1251
MslI	CAYNNNNRTG	2 cut(s)	75, 1064
Msp20I	TGGCCA	1 cut(s)	1251
MspA1I	CMGCKG	1 cut(s)	665
MspR9I	CCNGG	4 cut(s)	57, 184, 1656, 1657
MunI	CAATTG	1 cut(s)	1146
Mva1269I	GAATGC	1 cut(s)	1582
MvaI	CCWGG	2 cut(s)	57, 184
MvnI	CGCG	2 cut(s)	693, 863
MwoI	GCNNNNNNNGC	6 cut(s)	237, 610, 1047, 1174, 1563, 1687
NaeI	GCCGGC	2 cut(s)	606, 867
NciI	CCSGG	2 cut(s)	1656, 1657
NgoMIV	GCCGGC	2 cut(s)	604, 865
NlaIV	GGNNCC	4 cut(s)	107, 394, 795, 1742
NmeAIII	GCCGAG	2 cut(s)	446, 1707
NmuCI	GTSAC	5 cut(s)	65, 139, 434, 828, 875
NsbI	TGCGCA	1 cut(s)	1323
NspV	TTCGAA	1 cut(s)	1530
PagI	TCATGA	1 cut(s)	1222
PaqCI	CACCTGC	1 cut(s)	1315
PceI	AGGCCT	2 cut(s)	182, 1816
PciSI	GCTCTTC	2 cut(s)	1775, 1848
PctI	GAATGC	1 cut(s)	1582
PdiI	GCCGGC	2 cut(s)	606, 867
PdmI	GAANNNNTTC	2 cut(s)	11, 1394
PfeI	GAWTC	9 cut(s)	354, 469, 577, 599, 822, 843, 1513, 1535, 1621
PfoI	TCCNGGA	1 cut(s)	55
PinAI	ACCGGT	2 cut(s)	155, 790
PkrI	GCNGC	7 cut(s)	612, 664, 695, 970, 1129, 1472, 1787
Ple19I	CGATCG	2 cut(s)	390, 905
PleI	GAGTC	3 cut(s)	143, 1123, 1729
PpsI	GAGTC	3 cut(s)	143, 1123, 1729
PpuMI	RGGWCCY	1 cut(s)	105
Psp5II	RGGWCCY	1 cut(s)	105
Psp6I	CCWGG	2 cut(s)	55, 182
PspEI	GGTNACC	3 cut(s)	786, 828, 875
PspFI	CCCAGC	1 cut(s)	498
PspGI	CCWGG	2 cut(s)	55, 182
PspN4I	GGNNCC	4 cut(s)	107, 394, 795, 1742
PspPI	GGNCC	7 cut(s)	105, 290, 295, 308, 695, 1134, 1497
PspPPI	RGGWCCY	1 cut(s)	105
PstI	CTGCAG	2 cut(s)	289, 1790
PstNI	CAGNNNCTG	2 cut(s)	626, 1174
PsuI	RGATCY	6 cut(s)	392, 623, 709, 1029, 1523, 1648
PvuI	CGATCG	2 cut(s)	390, 905
RseI	CAYNNNNRTG	2 cut(s)	75, 1064
SapI	GCTCTTC	2 cut(s)	1775, 1848
SatI	GCNGC	7 cut(s)	611, 663, 694, 969, 1128, 1471, 1786
Sau96I	GGNCC	7 cut(s)	105, 290, 295, 308, 695, 1134, 1497
SchI	GAGTC	3 cut(s)	143, 1124, 1730
ScrFI	CCNGG	4 cut(s)	57, 184, 1656, 1657
SduI	GDGCHC	2 cut(s)	211, 887
SfaNI	GCATC	2 cut(s)	1396, 1677
SfcI	CTRYAG	3 cut(s)	285, 1786, 1881
SfuI	TTCGAA	1 cut(s)	1530
SgrAI	CRCCGGYG	2 cut(s)	155, 604
SinI	GGWCC	4 cut(s)	105, 295, 1134, 1497
SmaI	CCCGGG	1 cut(s)	1657
SmiMI	CAYNNNNRTG	2 cut(s)	75, 1064
SmlI	CTYRAG	2 cut(s)	170, 1823
SmoI	CTYRAG	2 cut(s)	170, 1823
SpeI	ACTAGT	1 cut(s)	203
Sse9I	AATT	6 cut(s)	381, 569, 1146, 1241, 1728, 1804
SseBI	AGGCCT	2 cut(s)	182, 1816
SsiI	CCGC	8 cut(s)	112, 590, 665, 693, 861, 968, 1500, 1557
SspMI	CTAG	4 cut(s)	137, 204, 713, 1554
StuI	AGGCCT	2 cut(s)	182, 1816
StyD4I	CCNGG	4 cut(s)	55, 182, 1654, 1655
StyI	CCWWGG	2 cut(s)	261, 1344
TaaI	ACNGT	8 cut(s)	12, 834, 1256, 1267, 1309, 1336, 1457, 1737
TaiI	ACGT	4 cut(s)	237, 327, 436, 1038
TaqII	GACCGA	1 cut(s)	760
TasI	AATT	6 cut(s)	381, 569, 1146, 1241, 1728, 1804
TauI	GCSGC	2 cut(s)	696, 971
TfiI	GAWTC	9 cut(s)	354, 469, 577, 599, 822, 843, 1513, 1535, 1621
TscAI	CASTG	3 cut(s)	637, 877, 1270
TseFI	GTSAC	5 cut(s)	65, 139, 434, 828, 875
TseI	GCWGC	5 cut(s)	610, 662, 1127, 1470, 1785
Tsp45I	GTSAC	5 cut(s)	65, 139, 434, 828, 875
TspDTI	ATGAA	9 cut(s)	35, 732, 1082, 1086, 1110, 1197, 1211, 1505, 1862
TspGWI	ACGGA	1 cut(s)	753
TspMI	CCCGGG	1 cut(s)	1655
TspRI	CASTG	3 cut(s)	637, 877, 1270
VpaK11BI	GGWCC	4 cut(s)	105, 295, 1134, 1497
XagI	CCTNNNNNAGG	1 cut(s)	1874
XapI	RAATTY	1 cut(s)	381
XmaI	CCCGGG	1 cut(s)	1655
XmiI	GTMKAC	1 cut(s)	1629
XmnI	GAANNNNTTC	2 cut(s)	11, 1394
XspI	CTAG	4 cut(s)	137, 204, 713, 1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.