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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g28521 |
| malus_domestica | MD05G1190300.v1.1 |
| pyrus_communis | pycom05g17150 pycom05g17590 |
| rosa_roxburghii | Rroxscaffold_2G00110410 Rroxscaffold_3G00224390 Rroxscaffold_3G00238930 Rroxscaffold_4G00318550 Rroxscaffold_5G00344200 Rroxscaffold_5G00364850 Rroxscaffold_5G00373450 Rroxscaffold_6G00412130 |
| rosa_rugosa | Rorug02G0399400 Rorug05G0428100 Rorug07G0278900 Rorug07G0279000 |
| rosa_samantha | Rh1BG236000 Rh2BG465700 Rh2BG474700 Rh2DG116100 Rh2DG474800 Rh2DG483400 Rh3AG115100 Rh3BG012900 Rh3DG013600 Rh3DG321200 Rh4AG084800 Rh5BG232000 Rh5BG504000 Rh5CG353900 Rh5CG527500 Rh6BG199800 Rh7AG402200 Rh7BG341600 Rh7BG407200 Rh7BG407300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 109 |
| AfaI | GTAC | 2 cut(s) | 42, 80 |
| AflII | CTTAAG | 1 cut(s) | 52 |
| AgsI | TTSAA | 1 cut(s) | 238 |
| AluBI | AGCT | 2 cut(s) | 173, 220 |
| AluI | AGCT | 2 cut(s) | 173, 220 |
| Alw21I | GWGCWC | 1 cut(s) | 222 |
| AlwI | GGATC | 1 cut(s) | 109 |
| BanII | GRGCYC | 1 cut(s) | 222 |
| Bbv12I | GWGCWC | 1 cut(s) | 222 |
| BccI | CCATC | 2 cut(s) | 92, 133 |
| BfaI | CTAG | 1 cut(s) | 23 |
| BfmI | CTRYAG | 1 cut(s) | 129 |
| BfrI | CTTAAG | 1 cut(s) | 52 |
| BmsI | GCATC | 2 cut(s) | 20, 165 |
| BpuEI | CTTGAG | 1 cut(s) | 233 |
| BseGI | GGATG | 1 cut(s) | 243 |
| BsiHKAI | GWGCWC | 1 cut(s) | 222 |
| Bsp1286I | GDGCHC | 1 cut(s) | 222 |
| Bsp1407I | TGTACA | 1 cut(s) | 78 |
| Bsp143I | GATC | 1 cut(s) | 101 |
| BspPI | GGATC | 1 cut(s) | 109 |
| BspTI | CTTAAG | 1 cut(s) | 52 |
| BsrGI | TGTACA | 1 cut(s) | 78 |
| BssMI | GATC | 1 cut(s) | 101 |
| BstAFI | CTTAAG | 1 cut(s) | 52 |
| BstAUI | TGTACA | 1 cut(s) | 78 |
| BstC8I | GCNNGC | 1 cut(s) | 222 |
| BstDEI | CTNAG | 1 cut(s) | 140 |
| BstF5I | GGATG | 1 cut(s) | 243 |
| BstKTI | GATC | 1 cut(s) | 104 |
| BstMBI | GATC | 1 cut(s) | 101 |
| BstSFI | CTRYAG | 1 cut(s) | 129 |
| BtsCI | GGATG | 1 cut(s) | 243 |
| Cac8I | GCNNGC | 1 cut(s) | 222 |
| Csp6I | GTAC | 2 cut(s) | 41, 79 |
| CviAII | CATG | 1 cut(s) | 179 |
| CviJI | RGCY | 2 cut(s) | 173, 220 |
| CviKI_1 | RGCY | 2 cut(s) | 173, 220 |
| CviQI | GTAC | 2 cut(s) | 41, 79 |
| DdeI | CTNAG | 1 cut(s) | 140 |
| DpnI | GATC | 1 cut(s) | 103 |
| DpnII | GATC | 1 cut(s) | 101 |
| Ecl136II | GAGCTC | 1 cut(s) | 220 |
| Eco24I | GRGCYC | 1 cut(s) | 222 |
| Eco53kI | GAGCTC | 1 cut(s) | 220 |
| EcoICRI | GAGCTC | 1 cut(s) | 220 |
| EcoT22I | ATGCAT | 2 cut(s) | 13, 158 |
| EcoT38I | GRGCYC | 1 cut(s) | 222 |
| FaeI | CATG | 1 cut(s) | 182 |
| FaiI | YATR | 5 cut(s) | 117, 131, 180, 186, 231 |
| FatI | CATG | 1 cut(s) | 178 |
| FokI | GGATG | 1 cut(s) | 230 |
| FriOI | GRGCYC | 1 cut(s) | 222 |
| FspBI | CTAG | 1 cut(s) | 23 |
| Hin1II | CATG | 1 cut(s) | 182 |
| HinfI | GANTC | 1 cut(s) | 26 |
| Hpy188III | TCNNGA | 1 cut(s) | 23 |
| HpyAV | CCTTC | 1 cut(s) | 120 |
| HpyCH4V | TGCA | 3 cut(s) | 11, 60, 156 |
| HpyF3I | CTNAG | 1 cut(s) | 140 |
| Hsp92II | CATG | 1 cut(s) | 182 |
| Kzo9I | GATC | 1 cut(s) | 101 |
| LpnPI | CCDG | 1 cut(s) | 145 |
| LweI | GCATC | 2 cut(s) | 20, 165 |
| MaeI | CTAG | 1 cut(s) | 23 |
| MalI | GATC | 1 cut(s) | 103 |
| MboI | GATC | 1 cut(s) | 101 |
| MboII | GAAGA | 1 cut(s) | 250 |
| MhlI | GDGCHC | 1 cut(s) | 222 |
| MluCI | AATT | 1 cut(s) | 198 |
| MnlI | CCTC | 2 cut(s) | 100, 257 |
| Mph1103I | ATGCAT | 2 cut(s) | 13, 158 |
| MseI | TTAA | 1 cut(s) | 53 |
| MspCI | CTTAAG | 1 cut(s) | 52 |
| NdeII | GATC | 1 cut(s) | 101 |
| NlaIII | CATG | 1 cut(s) | 182 |
| NsiI | ATGCAT | 2 cut(s) | 13, 158 |
| PfeI | GAWTC | 1 cut(s) | 26 |
| Psp124BI | GAGCTC | 1 cut(s) | 222 |
| RsaI | GTAC | 2 cut(s) | 42, 80 |
| RsaNI | GTAC | 2 cut(s) | 41, 79 |
| SacI | GAGCTC | 1 cut(s) | 222 |
| SaqAI | TTAA | 1 cut(s) | 53 |
| Sau3AI | GATC | 1 cut(s) | 101 |
| SduI | GDGCHC | 1 cut(s) | 222 |
| SetI | ASST | 6 cut(s) | 59, 67, 92, 112, 175, 222 |
| SfaNI | GCATC | 2 cut(s) | 20, 165 |
| SfcI | CTRYAG | 1 cut(s) | 129 |
| SgeI | CNNG | 6 cut(s) | 35, 172, 191, 203, 233, 237 |
| SmlI | CTYRAG | 2 cut(s) | 52, 248 |
| SmoI | CTYRAG | 2 cut(s) | 52, 248 |
| Sse9I | AATT | 1 cut(s) | 198 |
| SspI | AATATT | 1 cut(s) | 85 |
| SspMI | CTAG | 1 cut(s) | 23 |
| SstI | GAGCTC | 1 cut(s) | 222 |
| TasI | AATT | 1 cut(s) | 198 |
| TatI | WGTACW | 1 cut(s) | 78 |
| TfiI | GAWTC | 1 cut(s) | 26 |
| Tru1I | TTAA | 1 cut(s) | 53 |
| Tru9I | TTAA | 1 cut(s) | 53 |
| TspDTI | ATGAA | 3 cut(s) | 17, 132, 219 |
| TspGWI | ACGGA | 1 cut(s) | 200 |
| Vha464I | CTTAAG | 1 cut(s) | 52 |
| XbaI | TCTAGA | 1 cut(s) | 22 |
| XspI | CTAG | 1 cut(s) | 23 |
| Zsp2I | ATGCAT | 2 cut(s) | 13, 158 |