Retinoblastoma-related
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g28521 |
| malus_domestica | MD05G1190300.v1.1 |
| pyrus_communis | pycom05g17150 pycom05g17590 |
| rosa_roxburghii | Rroxscaffold_2G00110410 Rroxscaffold_3G00224390 Rroxscaffold_3G00238930 Rroxscaffold_4G00318550 Rroxscaffold_5G00344200 Rroxscaffold_5G00364850 Rroxscaffold_5G00373450 Rroxscaffold_6G00412130 |
| rosa_rugosa | Rorug02G0399400 Rorug05G0428100 Rorug07G0278900 Rorug07G0279000 |
| rosa_samantha | Rh1BG236000 Rh2BG465700 Rh2BG474700 Rh2DG116100 Rh2DG474800 Rh2DG483400 Rh3AG115100 Rh3BG012900 Rh3DG013600 Rh3DG321200 Rh4AG084800 Rh5BG232000 Rh5BG504000 Rh5CG353900 Rh5CG527500 Rh6BG199800 Rh7AG402200 Rh7BG341600 Rh7BG407200 Rh7BG407300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 43 |
| AcsI | RAATTY | 1 cut(s) | 142 |
| AcuI | CTGAAG | 1 cut(s) | 192 |
| AflIII | ACRYGT | 1 cut(s) | 127 |
| AjnI | CCWGG | 1 cut(s) | 87 |
| AluBI | AGCT | 5 cut(s) | 49, 101, 109, 152, 264 |
| AluI | AGCT | 5 cut(s) | 49, 101, 109, 152, 264 |
| ApeKI | GCWGC | 1 cut(s) | 264 |
| ApoI | RAATTY | 1 cut(s) | 142 |
| AsuHPI | GGTGA | 1 cut(s) | 229 |
| BbvI | GCAGC | 1 cut(s) | 251 |
| BccI | CCATC | 1 cut(s) | 35 |
| BciT130I | CCWGG | 1 cut(s) | 89 |
| BisI | GCNGC | 1 cut(s) | 265 |
| BlsI | GCNGC | 1 cut(s) | 266 |
| Bme1390I | CCNGG | 1 cut(s) | 89 |
| BmrFI | CCNGG | 1 cut(s) | 89 |
| BseBI | CCWGG | 1 cut(s) | 89 |
| BseGI | GGATG | 1 cut(s) | 27 |
| BseXI | GCAGC | 1 cut(s) | 251 |
| BspACI | CCGC | 1 cut(s) | 43 |
| Bst2UI | CCWGG | 1 cut(s) | 89 |
| Bst4CI | ACNGT | 1 cut(s) | 189 |
| Bst6I | CTCTTC | 1 cut(s) | 230 |
| BstC8I | GCNNGC | 1 cut(s) | 47 |
| BstF5I | GGATG | 1 cut(s) | 27 |
| BstNI | CCWGG | 1 cut(s) | 89 |
| BstNSI | RCATGY | 1 cut(s) | 131 |
| BstSCI | CCNGG | 1 cut(s) | 87 |
| BstV1I | GCAGC | 1 cut(s) | 251 |
| BtsCI | GGATG | 1 cut(s) | 27 |
| BtsIMutI | CAGTG | 1 cut(s) | 70 |
| Cac8I | GCNNGC | 1 cut(s) | 47 |
| CsiI | ACCWGGT | 1 cut(s) | 87 |
| CviAII | CATG | 1 cut(s) | 128 |
| CviJI | RGCY | 5 cut(s) | 49, 101, 109, 152, 264 |
| CviKI_1 | RGCY | 5 cut(s) | 49, 101, 109, 152, 264 |
| Eam1104I | CTCTTC | 1 cut(s) | 230 |
| EarI | CTCTTC | 1 cut(s) | 230 |
| Eco57I | CTGAAG | 1 cut(s) | 192 |
| EcoRII | CCWGG | 1 cut(s) | 87 |
| FaeI | CATG | 1 cut(s) | 131 |
| FaiI | YATR | 1 cut(s) | 129 |
| FatI | CATG | 1 cut(s) | 127 |
| Fnu4HI | GCNGC | 1 cut(s) | 265 |
| FokI | GGATG | 1 cut(s) | 14 |
| Fsp4HI | GCNGC | 1 cut(s) | 265 |
| GluI | GCNGC | 1 cut(s) | 265 |
| Hin1II | CATG | 1 cut(s) | 131 |
| HincII | GTYRAC | 1 cut(s) | 16 |
| HindII | GTYRAC | 1 cut(s) | 16 |
| HinfI | GANTC | 1 cut(s) | 8 |
| HphI | GGTGA | 1 cut(s) | 229 |
| Hpy166II | GTNNAC | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 2 cut(s) | 158, 244 |
| Hpy8I | GTNNAC | 1 cut(s) | 16 |
| HpyCH4III | ACNGT | 1 cut(s) | 189 |
| Hsp92II | CATG | 1 cut(s) | 131 |
| LpnPI | CCDG | 6 cut(s) | 18, 32, 74, 101, 178, 183 |
| Lsp1109I | GCAGC | 1 cut(s) | 251 |
| MabI | ACCWGGT | 1 cut(s) | 87 |
| MboII | GAAGA | 3 cut(s) | 68, 185, 247 |
| MluCI | AATT | 4 cut(s) | 142, 176, 247, 255 |
| MmeI | TCCRAC | 1 cut(s) | 57 |
| MnlI | CCTC | 1 cut(s) | 50 |
| MspR9I | CCNGG | 1 cut(s) | 89 |
| MvaI | CCWGG | 1 cut(s) | 89 |
| NlaIII | CATG | 1 cut(s) | 131 |
| NspI | RCATGY | 1 cut(s) | 131 |
| PciI | ACATGT | 1 cut(s) | 127 |
| PfeI | GAWTC | 1 cut(s) | 8 |
| PkrI | GCNGC | 1 cut(s) | 266 |
| PscI | ACATGT | 1 cut(s) | 127 |
| Psp6I | CCWGG | 1 cut(s) | 87 |
| PspGI | CCWGG | 1 cut(s) | 87 |
| SatI | GCNGC | 1 cut(s) | 265 |
| ScrFI | CCNGG | 1 cut(s) | 89 |
| SetI | ASST | 7 cut(s) | 42, 51, 90, 103, 111, 154, 266 |
| SexAI | ACCWGGT | 1 cut(s) | 87 |
| Sse9I | AATT | 4 cut(s) | 142, 176, 247, 255 |
| SsiI | CCGC | 1 cut(s) | 43 |
| StyD4I | CCNGG | 1 cut(s) | 87 |
| TaaI | ACNGT | 1 cut(s) | 189 |
| TasI | AATT | 4 cut(s) | 142, 176, 247, 255 |
| TfiI | GAWTC | 1 cut(s) | 8 |
| TscAI | CASTG | 1 cut(s) | 70 |
| TseI | GCWGC | 1 cut(s) | 264 |
| TspDTI | ATGAA | 1 cut(s) | 189 |
| TspGWI | ACGGA | 1 cut(s) | 68 |
| TspRI | CASTG | 1 cut(s) | 70 |
| XapI | RAATTY | 1 cut(s) | 142 |
| XceI | RCATGY | 1 cut(s) | 131 |