Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001443

Physical Location & Seq

Genomic Coordinates Reverse (-)

51339454 .. 51343981

Gene Structure 4528 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0340300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGCTGAGGAGCAAATAAATTTTGAAGTGGAGGAATATGGAGGTGCTCAGAAGCTCCAATATCAGGGAAGTGGAGCCATATCTGCTCTTGCAGATGAAGAACCGATGGTCGAAGATGATGAGTACGACGATCTATATGATGATGTTAATGTTGGAGAGGGTTTCCTGCAGATGCATCGATCTGAGGCACCACTCCCTGCTGCTGGTGTTGGGAATGGAGGACTCCAAGCTCAGAAAACTGATGTTCCCGAACTAAGAGTTCAAGCCGGTGCTTCTCAGGAAATGAAAATTCCGGGGGTTTCAGTTGGAGGAAATTATTCTAGTGTTCCTGAACAGAAGGTTCAGCCACCAGTCGCTAACGTGCCTGAAACTCAAGTCAGGCATATGGGGTTTCAGGGGTCAACAACTACGCCCTCCAATGTTGGTGCTGATTCTTTGGAAATTACTGCAAAATTTGCTAACGAGCCTCTTCCATCAATGAATTCTGGCACCACTGGTCCTTCAGCTGTTACACAGATGCCTGCTAATCAAATGAATATGAAGGTCAATCTTAATCGTCCAATGGTTAATGAAAACCAAATCCGTCCTCCAATTGAGAATGGTTCGGCCACGTTGTTTGTGGGAGATTTACATTGGTGGACAACTGATGCTGAACTGGAAGGTGTTTTATCTCAGTTTGGGAGGGTGAAGGAAATTAAGTTTTTTGATGAAAGAGCCAGTGGTAAATCCAAAGGTTATTGTCAGGTAGATTTTTATGATCCCGCGGCTGCCAGTGCATGCAAAGAGGGAATGGATGGTTATGTTTTCAATGGGAGAGCTTGTGTTGTGGCCTTTGCTACTTCACAAACTTTAAAGCAGATGGGAGCTAATTATGTGAACAAATCCCAAGGGCAGGTTCAGACTCAGCCCCAAGGGAGAAGGCCCATGAATGATGGTGCTGGGAGAGGGGGAGGCATGAATTTTCAAGGTGGAGACACGGGGAGAAATTTTGGGAGGGGTAATTGGGGGCGAGGTGGACAGGGAGTACCCAACAGAGGTCCTGGTGGACCAGGCCGGGGAAGAGGAGGGGCCATGGGTGCAAAGAACATGGTTGGGAATAATGCTGGGGTTGGAGCTGGTGCTAATGGAGGAGGCTATGGACAGGGCCTTGCAGGTCCTGGATTTGGCGGTCCTGTGGGAGGTATGATGAATGCACCTGGTATGATGGGTCCTGGGTTTGATCCAACATATATGGGTCGAGGAGGTGGTTACGGAGGGTTCCCTGGTCCTGGTTTTCCTGGAATGCTTCCTCAATTTCCTGGTGTTAATGCAATGGGACTTGCTGGGGTTGCTCCTCATGTAAACCCAGCTTTCTTTGGCAGGGGAATGGCAACGAATGGGATGGGGATGATGGGTTCTTCTGGAATGGAGGGGCATCATGCCCCTATGTGGAATGATCCAAGTATGGGTGGGTGGGGAGGAGAAGAACAGGATCGAAGAACTAGGGAGTCAAGCTATGGGGGTGATGATGGTGCTTCTGAGTATGGAAACTATGTAGAGGCAAATCATGAGAAATCAGCTAAGTCAAGTGCTGCCTCAAGGGAAAGAGAACGGGGATCTGAGCGTGAGTGGACAGGAACCTCTGAGAGGAGGCATCGTGATGAGAGAGAACAAGACTTGGACAGGTCTGAAAGGGAGCACCGGGAGCCCAGGTATAAAGAAGAAAAAGATAGTTACAGAGATCATCGTCGAAGAGAGCGTGATGTGGGTTATGATGATGACTGGGACAGAGGACAATCTTCTTCAAGACCTCGCAGTAGGTCCAAAGCAATGCCGGAAGATGATCATCGTTCTCGATCAAGGGATGTGGATTATGGGAAGAGGAGACGATTGCCATCTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001871 GO:0003674 GO:0003824 GO:0004338 GO:0004553 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0008422 GO:0015926 GO:0016020 GO:0016787 GO:0016798 GO:0030246 GO:0030247 GO:0031224 GO:0031225 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17

Protein Analysis

627

Amino Acids

67.3

Weight (kDa)

5.52

Isoelectric Point (pI)

47.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	205 - 274	4.4e-14	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37490
fragaria_vesca	FvH4_1g29930 FvH4_4g33190 FvH4_5g17730
malus_domestica	MD06G1232800.v1.1 MD09G1266300.v1.1 MD09G1266400.v1.1 MD13G1017300.v1.1 MD14G1239800.v1.1 MD16G1015400.v1.1 MD17G1262600.v1.1
prunus_persica	Prupe.1G336200_v2.0.a1 Prupe.3G164200_v2.0.a1 Prupe.5G237400_v2.0.a1
pyrus_communis	pycom06g20780 pycom09g17950 pycom09g17960 pycom13g01490 pycom14g20140 pycom16g01430 pycom17g26260
rosa_chinensis	RchiOBHm_Chr3g0492391 RchiOBHm_Chr4g0442301 RchiOBHm_Chr7g0177891
rosa_laevigata	RLG00000005493 RLG00000006019 RLG00000022770
rosa_multiflora	Rmu_sc0000124.1_g000056 Rmu_sc0003156.1_g000014 Rmu_sc0003156.1_g000016 Rmu_sc0006214.1_g000002 Rmu_sc0038448.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275460 Rroxscaffold_5G00383160 Rroxscaffold_6G00392340
rosa_rugosa	Rorug03G0253600 Rorug04G0340300 Rorug06G0410800
rosa_samantha	Rh3AG303800 Rh3BG339800 Rh3CG337000 Rh3DG338900 Rh4BG405300 Rh4CG420500 Rh4DG398600 Rh7AG010000 Rh7BG010100 Rh7CG010200 Rh7DG010100
rosa_wichuraiana	Rw3G026790 Rw4G033840 Rw7G000840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	883, 1142
AccB1I	GGYRCC	2 cut(s)	187, 488
AccII	CGCG	1 cut(s)	764
AciI	CCGC	3 cut(s)	762, 764, 1167
AclWI	GGATC	5 cut(s)	752, 1214, 1430, 1479, 1603
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	6 cut(s)	19, 288, 452, 481, 958, 985
AcuI	CTGAAG	1 cut(s)	486
AfaI	GTAC	2 cut(s)	125, 1026
AgsI	TTSAA	5 cut(s)	26, 263, 808, 965, 1785
AjuI	GAANNNNNNNTTGG	2 cut(s)	879, 911
AloI	GAACNNNNNNTCC	2 cut(s)	1378, 1410
AluBI	AGCT	9 cut(s)	55, 230, 506, 818, 866, 1115, 1349, 1494, 1559
AluI	AGCT	9 cut(s)	55, 230, 506, 818, 866, 1115, 1349, 1494, 1559
Alw21I	GWGCWC	2 cut(s)	49, 1680
Alw26I	GTCTC	2 cut(s)	966, 1858
AlwI	GGATC	5 cut(s)	752, 1214, 1430, 1479, 1603
AlwNI	CAGNNNCTG	1 cut(s)	1157
AoxI	GGCC	6 cut(s)	606, 828, 920, 1051, 1068, 1144
ApeKI	GCWGC	3 cut(s)	200, 767, 1571
ApoI	RAATTY	6 cut(s)	19, 288, 452, 481, 958, 985
Asp700I	GAANNNNTTC	1 cut(s)	316
AsuC2I	CCSGG	3 cut(s)	294, 1055, 1682
AsuHPI	GGTGA	2 cut(s)	697, 1514
AvaII	GGWCC	8 cut(s)	497, 1037, 1046, 1154, 1169, 1208, 1265, 1800
BanI	GGYRCC	2 cut(s)	187, 488
BanII	GRGCYC	1 cut(s)	1689
Bbv12I	GWGCWC	2 cut(s)	49, 1680
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	3 cut(s)	187, 754, 1558
BcgI	CGANNNNNNTGC	2 cut(s)	158, 192
BclI	TGATCA	1 cut(s)	1822
BcnI	CCSGG	3 cut(s)	294, 1055, 1682
BcoDI	GTCTC	2 cut(s)	966, 1858
BfaI	CTAG	2 cut(s)	321, 1482
BfmI	CTRYAG	1 cut(s)	167
BfuAI	ACCTGC	2 cut(s)	883, 1142
BisI	GCNGC	4 cut(s)	201, 765, 768, 1572
BlsI	GCNGC	4 cut(s)	202, 766, 769, 1573
Bme18I	GGWCC	8 cut(s)	497, 1037, 1046, 1154, 1169, 1208, 1265, 1800
BmiI	GGNNCC	8 cut(s)	76, 189, 490, 1069, 1209, 1259, 1618, 1686
BmrI	ACTGGG	1 cut(s)	1771
BmsI	GCATC	6 cut(s)	162, 184, 507, 637, 1423, 1642
BmuI	ACTGGG	1 cut(s)	1771
Bpu10I	CCTNAGC	1 cut(s)	6
BpuEI	CTTGAG	2 cut(s)	357, 1561
BpuMI	CCSGG	3 cut(s)	294, 1055, 1682
Bsa29I	ATCGAT	1 cut(s)	178
BsaBI	GATNNNNATC	2 cut(s)	1824, 1873
BsaJI	CCNNGG	9 cut(s)	293, 762, 886, 910, 1054, 1071, 1211, 1261, 1688
BsaXI	ACNNNNNCTCC	6 cut(s)	805, 835, 1621, 1651, 1676, 1706
Bse118I	RCCGGY	1 cut(s)	266
Bse1I	ACTGG	6 cut(s)	350, 499, 660, 717, 771, 1766
Bse3DI	GCAATG	2 cut(s)	1317, 1815
Bse8I	GATNNNNATC	2 cut(s)	1824, 1873
BseCI	ATCGAT	1 cut(s)	178
BseDI	CCNNGG	9 cut(s)	293, 762, 886, 910, 1054, 1071, 1211, 1261, 1688
BseGI	GGATG	4 cut(s)	799, 1386, 1392, 1849
BseJI	GATNNNNATC	2 cut(s)	1824, 1873
BseMI	GCAATG	2 cut(s)	1317, 1815
BseNI	ACTGG	6 cut(s)	350, 499, 660, 717, 771, 1766
BseRI	GAGGAG	8 cut(s)	23, 1077, 1143, 1254, 1323, 1473, 1642, 1876
BseXI	GCAGC	3 cut(s)	187, 754, 1558
BseYI	CCCAGC	4 cut(s)	938, 1103, 1322, 1345
Bsh1236I	CGCG	1 cut(s)	764
BshFI	GGCC	6 cut(s)	608, 830, 922, 1053, 1070, 1146
BshNI	GGYRCC	2 cut(s)	187, 488
BshVI	ATCGAT	1 cut(s)	178
BsiHKAI	GWGCWC	2 cut(s)	49, 1680
BsiSI	CCGG	5 cut(s)	267, 293, 1054, 1681, 1814
BslFI	GGGAC	2 cut(s)	1329, 1778
BsmAI	GTCTC	2 cut(s)	966, 1858
BsmBI	CGTCTC	1 cut(s)	1858
BsmFI	GGGAC	2 cut(s)	1329, 1778
BsmI	GAATGC	2 cut(s)	1195, 1287
BsnI	GGCC	6 cut(s)	608, 830, 922, 1053, 1070, 1146
Bsp1286I	GDGCHC	3 cut(s)	49, 1680, 1689
Bsp19I	CCATGG	1 cut(s)	1071
BspACI	CCGC	3 cut(s)	762, 764, 1167
BspANI	GGCC	6 cut(s)	608, 830, 922, 1053, 1070, 1146
BspDI	ATCGAT	1 cut(s)	178
BspFNI	CGCG	1 cut(s)	764
BspHI	TCATGA	1 cut(s)	1546
BspLI	GGNNCC	8 cut(s)	76, 189, 490, 1069, 1209, 1259, 1618, 1686
BspMAI	CTGCAG	1 cut(s)	171
BspMI	ACCTGC	2 cut(s)	883, 1142
BspPI	GGATC	5 cut(s)	752, 1214, 1430, 1479, 1603
BspT107I	GGYRCC	2 cut(s)	187, 488
BsrDI	GCAATG	2 cut(s)	1317, 1815
BsrFI	RCCGGY	1 cut(s)	266
BsrI	ACTGG	6 cut(s)	350, 499, 660, 717, 771, 1766
BssAI	RCCGGY	1 cut(s)	266
BssECI	CCNNGG	9 cut(s)	293, 762, 886, 910, 1054, 1071, 1211, 1261, 1688
BssT1I	CCWWGG	3 cut(s)	886, 910, 1071
Bst6I	CTCTTC	4 cut(s)	474, 1054, 1726, 1853
BstAPI	GCANNNNNTGC	1 cut(s)	455
BstC8I	GCNNGC	2 cut(s)	522, 778
BstDSI	CCRYGG	2 cut(s)	762, 1071
BstENI	CCTNNNNNAGG	2 cut(s)	1176, 1624
BstF5I	GGATG	4 cut(s)	799, 1386, 1392, 1849
BstFNI	CGCG	1 cut(s)	764
BstMAI	GTCTC	2 cut(s)	966, 1858
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 455, 773, 1076, 1328, 1684
BstNSI	RCATGY	1 cut(s)	780
BstSFI	CTRYAG	1 cut(s)	167
BstUI	CGCG	1 cut(s)	764
BstV1I	GCAGC	3 cut(s)	187, 754, 1558
BstX2I	RGATCY	1 cut(s)	1595
BstYI	RGATCY	1 cut(s)	1595
Bsu15I	ATCGAT	1 cut(s)	178
BsuRI	GGCC	6 cut(s)	608, 830, 922, 1053, 1070, 1146
BsuTUI	ATCGAT	1 cut(s)	178
BtgI	CCRYGG	2 cut(s)	762, 1071
BtsCI	GGATG	4 cut(s)	799, 1386, 1392, 1849
BtsIMutI	CAGTG	3 cut(s)	492, 724, 778
BveI	ACCTGC	2 cut(s)	883, 1142
Cac8I	GCNNGC	2 cut(s)	522, 778
CaiI	CAGNNNCTG	1 cut(s)	1157
CciI	TCATGA	1 cut(s)	1546
Cfr10I	RCCGGY	1 cut(s)	266
Cfr42I	CCGCGG	1 cut(s)	765
ClaI	ATCGAT	1 cut(s)	178
CsiI	ACCWGGT	1 cut(s)	1195
Csp6I	GTAC	2 cut(s)	124, 1025
CspCI	CAANNNNNGTGG	4 cut(s)	598, 633, 1827, 1862
CviAII	CATG	8 cut(s)	777, 925, 955, 1072, 1087, 1337, 1418, 1547
CviQI	GTAC	2 cut(s)	124, 1025
DraI	TTTAAA	1 cut(s)	852
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	4 cut(s)	474, 1054, 1726, 1853
EarI	CTCTTC	4 cut(s)	474, 1054, 1726, 1853
Eco130I	CCWWGG	3 cut(s)	886, 910, 1071
Eco24I	GRGCYC	1 cut(s)	1689
Eco47I	GGWCC	8 cut(s)	497, 1037, 1046, 1154, 1169, 1208, 1265, 1800
Eco57I	CTGAAG	1 cut(s)	486
EcoNI	CCTNNNNNAGG	2 cut(s)	1176, 1624
EcoO109I	RGGNCCY	4 cut(s)	1037, 1144, 1154, 1208
EcoRI	GAATTC	1 cut(s)	481
EcoT14I	CCWWGG	3 cut(s)	886, 910, 1071
EcoT22I	ATGCAT	1 cut(s)	177
EcoT38I	GRGCYC	1 cut(s)	1689
ErhI	CCWWGG	3 cut(s)	886, 910, 1071
Esp3I	CGTCTC	1 cut(s)	1858
FaeI	CATG	8 cut(s)	780, 928, 958, 1075, 1090, 1340, 1421, 1550
FaqI	GGGAC	2 cut(s)	1329, 1778
FatI	CATG	8 cut(s)	776, 924, 954, 1071, 1086, 1336, 1417, 1546
FauI	CCCGC	1 cut(s)	769
FauNDI	CATATG	1 cut(s)	384
FbaI	TGATCA	1 cut(s)	1822
Fnu4HI	GCNGC	4 cut(s)	201, 765, 768, 1572
FokI	GGATG	4 cut(s)	806, 1393, 1399, 1856
FriOI	GRGCYC	1 cut(s)	1689
Fsp4HI	GCNGC	4 cut(s)	201, 765, 768, 1572
FspBI	CTAG	2 cut(s)	321, 1482
GluI	GCNGC	4 cut(s)	201, 765, 768, 1572
GsaI	CCCAGC	4 cut(s)	942, 1107, 1326, 1349
HaeIII	GGCC	6 cut(s)	608, 830, 922, 1053, 1070, 1146
HapII	CCGG	5 cut(s)	267, 293, 1054, 1681, 1814
Hin1II	CATG	8 cut(s)	780, 928, 958, 1075, 1090, 1340, 1421, 1550
HincII	GTYRAC	1 cut(s)	402
HindII	GTYRAC	1 cut(s)	402
HinfI	GANTC	4 cut(s)	222, 431, 901, 1487
HpaII	CCGG	5 cut(s)	267, 293, 1054, 1681, 1814
HphI	GGTGA	2 cut(s)	697, 1514
Hpy166II	GTNNAC	7 cut(s)	402, 639, 877, 1016, 1046, 1342, 1611
Hpy188I	TCNGA	9 cut(s)	51, 184, 234, 900, 1519, 1600, 1624, 1669, 1879
Hpy188III	TCNNGA	8 cut(s)	248, 278, 329, 1401, 1547, 1637, 1785, 1833
Hpy8I	GTNNAC	7 cut(s)	402, 639, 877, 1016, 1046, 1342, 1611
Hpy99I	CGWCG	2 cut(s)	131, 1731
HpyAV	CCTTC	6 cut(s)	331, 510, 535, 653, 682, 912
HpyCH4IV	ACGT	2 cut(s)	360, 611
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 455, 773, 1076, 1328, 1684
HpySE526I	ACGT	2 cut(s)	360, 611
Hsp92II	CATG	8 cut(s)	780, 928, 958, 1075, 1090, 1340, 1421, 1550
Ksp22I	TGATCA	1 cut(s)	1822
KspI	CCGCGG	1 cut(s)	765
LmnI	GCTCC	8 cut(s)	10, 60, 74, 863, 1112, 1336, 1675, 1684
Lsp1109I	GCAGC	3 cut(s)	187, 754, 1558
LweI	GCATC	6 cut(s)	162, 184, 507, 637, 1423, 1642
MabI	ACCWGGT	1 cut(s)	1195
MaeI	CTAG	2 cut(s)	321, 1482
MaeII	ACGT	2 cut(s)	360, 611
MaeIII	GTNAC	3 cut(s)	508, 1247, 1712
MfeI	CAATTG	1 cut(s)	591
MflI	RGATCY	1 cut(s)	1595
MhlI	GDGCHC	3 cut(s)	49, 1680, 1689
MlyI	GAGTC	3 cut(s)	216, 895, 1496
MmeI	TCCRAC	4 cut(s)	133, 286, 1090, 1247
Mph1103I	ATGCAT	1 cut(s)	177
MroXI	GAANNNNTTC	1 cut(s)	316
MseI	TTAA	6 cut(s)	147, 552, 567, 696, 851, 1305
MslI	CAYNNNNRTG	2 cut(s)	1638, 1879
MspA1I	CMGCKG	2 cut(s)	506, 764
MspI	CCGG	5 cut(s)	267, 293, 1054, 1681, 1814
MunI	CAATTG	1 cut(s)	591
Mva1269I	GAATGC	2 cut(s)	1195, 1287
MvnI	CGCG	1 cut(s)	764
MwoI	GCNNNNNNNGC	6 cut(s)	83, 455, 773, 1076, 1328, 1684
NciI	CCSGG	3 cut(s)	294, 1055, 1682
NcoI	CCATGG	1 cut(s)	1071
NdeI	CATATG	1 cut(s)	384
NlaIII	CATG	8 cut(s)	780, 928, 958, 1075, 1090, 1340, 1421, 1550
NlaIV	GGNNCC	8 cut(s)	76, 189, 490, 1069, 1209, 1259, 1618, 1686
NsiI	ATGCAT	1 cut(s)	177
NspI	RCATGY	1 cut(s)	780
PaeI	GCATGC	1 cut(s)	780
PagI	TCATGA	1 cut(s)	1546
PcsI	WCGNNNNNNNCGW	1 cut(s)	1735
PctI	GAATGC	2 cut(s)	1195, 1287
PdmI	GAANNNNTTC	1 cut(s)	316
PfeI	GAWTC	1 cut(s)	431
PfoI	TCCNGGA	2 cut(s)	1156, 1276
PkrI	GCNGC	4 cut(s)	202, 766, 769, 1573
PleI	GAGTC	3 cut(s)	216, 895, 1495
PpsI	GAGTC	3 cut(s)	216, 895, 1495
PpuMI	RGGWCCY	3 cut(s)	1037, 1154, 1208
Psp5II	RGGWCCY	3 cut(s)	1037, 1154, 1208
PspFI	CCCAGC	4 cut(s)	938, 1103, 1322, 1345
PspN4I	GGNNCC	8 cut(s)	76, 189, 490, 1069, 1209, 1259, 1618, 1686
PspPPI	RGGWCCY	3 cut(s)	1037, 1154, 1208
PstI	CTGCAG	1 cut(s)	171
PstNI	CAGNNNCTG	1 cut(s)	1157
PsuI	RGATCY	1 cut(s)	1595
PvuII	CAGCTG	1 cut(s)	506
RsaI	GTAC	2 cut(s)	125, 1026
RsaNI	GTAC	2 cut(s)	124, 1025
RseI	CAYNNNNRTG	2 cut(s)	1638, 1879
SacII	CCGCGG	1 cut(s)	765
SaqAI	TTAA	6 cut(s)	147, 552, 567, 696, 851, 1305
SatI	GCNGC	4 cut(s)	201, 765, 768, 1572
SchI	GAGTC	3 cut(s)	216, 895, 1496
SduI	GDGCHC	3 cut(s)	49, 1680, 1689
SexAI	ACCWGGT	1 cut(s)	1195
SfaNI	GCATC	6 cut(s)	162, 184, 507, 637, 1423, 1642
SfcI	CTRYAG	1 cut(s)	167
Sfr303I	CCGCGG	1 cut(s)	765
SgrBI	CCGCGG	1 cut(s)	765
SinI	GGWCC	8 cut(s)	497, 1037, 1046, 1154, 1169, 1208, 1265, 1800
SmiMI	CAYNNNNRTG	2 cut(s)	1638, 1879
SmlI	CTYRAG	2 cut(s)	372, 1576
SmoI	CTYRAG	2 cut(s)	372, 1576
SphI	GCATGC	1 cut(s)	780
SsiI	CCGC	3 cut(s)	762, 764, 1167
SspMI	CTAG	2 cut(s)	321, 1482
StyI	CCWWGG	3 cut(s)	886, 910, 1071
TaiI	ACGT	2 cut(s)	363, 614
TaqI	TCGA	6 cut(s)	111, 178, 1237, 1474, 1729, 1834
TauI	GCSGC	1 cut(s)	767
TfiI	GAWTC	1 cut(s)	431
Tru1I	TTAA	6 cut(s)	147, 552, 567, 696, 851, 1305
Tru9I	TTAA	6 cut(s)	147, 552, 567, 696, 851, 1305
TscAI	CASTG	3 cut(s)	499, 724, 778
TseI	GCWGC	3 cut(s)	200, 767, 1571
TspGWI	ACGGA	2 cut(s)	572, 1266
TspRI	CASTG	3 cut(s)	499, 724, 778
VpaK11BI	GGWCC	8 cut(s)	497, 1037, 1046, 1154, 1169, 1208, 1265, 1800
XagI	CCTNNNNNAGG	2 cut(s)	1176, 1624
XapI	RAATTY	6 cut(s)	19, 288, 452, 481, 958, 985
XceI	RCATGY	1 cut(s)	780
XcmI	CCANNNNNNNNNTGG	1 cut(s)	616
XmnI	GAANNNNTTC	1 cut(s)	316
XspI	CTAG	2 cut(s)	321, 1482
Zsp2I	ATGCAT	1 cut(s)	177

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.