Rorug05G0277400

Tudor-like domain present in plant sequences.

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
31436170 .. 31441346
5177 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0277400.1

Sequence Viewer

Length: 2679 bp
ATGACTAAATATTATGATGGTGACCTATACAATAATGCTCTTGGTTTTCGGCTAATAAGGCAACATGAATACAATGCTTCATGTGATATATTCAGTAAGTTCAAAGATGCAAATGTTAGCTTCAAGGTAGGCTTAATCAATGATGTGTCAGGGATATTAAGCTTAAGCTTTTACGAAGCATCACATCCTAGGCTGCGTGGAGAAGATTTACTAGAAGAGGCTCTTGTATTCACTACCACTCACCTTGAGTTGGGGTGCCTAAATATGTTTGACTTTTTCTTTTGGGTGGGCTTGTGCAGCTTATGTCAGGATTTGGAGAACACAATTTTCACGATTGGAGAAGTGAGGTTTGAGATGGAGGAGGGTGGTTTGCGATATACTGACCGACAATACTACAATTCTGGCATGGACCCAAACGCTGAAGAAGGATCCAGTACTGACAATTCGGATGAGGAGATTGAATACACAAATTTGATGGAAGAGGCAGAAATGCAAGATTGTACACGATACAGAGGGAAGCTGTATAAGGATTTGAAATTAGAGGATTTGAAGGAAGTTGAGTTTAATAGCATCGAGGAAGTGGACAAGTTCTACTCTTACTATTCTCTAGCGAAGGGGTTCAGTGTAAGGAAGCAGAAGCTCGACAAGAACCGTGCGGGACTAGTCATTAGAAGACAGTTGGTTTGCTCGAAGCAAGGGAAGCGAAGAGCCCCAAAAGATACTATTAGTCATCAGCAAGGGTCGAAGGGGAAGCAGGACAATTGTCAGCTAAGTTCAATTGGGAATTGTCAACAGAACTCGACAAATATCAGTGGGCAGAACCCTCACAAAAAGCAGTGCACTGAAACCCGACGAGCAACAAGAGTTAATTGTCCAGCAAGTTTTGTTGTTAGGTTTTGTACCAAAAGGAGGGTGTACTATGCCTCAGAATTCATAACTGAACACAACCATGCTTTGGGTAGACCTGAGCATCGTCAGTTTCGAAGATCACACCTCAGGGACCGCAACCTTGCTCAGCTTAATGCATCAAGGAAAGTTTTAGTGAGAACATGCCATGCTTACGAGTTCTTGGTACACCAAGCTGGAGGCTACGAGTTTGTTGGATTATACAACAAACCACAGGGTGAAAGGAAAGAAGTAGTAATGGATGGGGATGCACAGTCTTTGGTAACTTGGATGAATTTCAAGGCAATGCGGGACCCCCATTTTTATTGCATATTCAGTGTTGATAAGGAGGGGAGGCTTGCAAATGTGTTTTGGCGAGATGGGCAGTCGTTAACCGATTACAATGCTTTTGGTGAGGTTCTGATTTTCGACAGCAGTGAAAAATGCAACATATATGGCAAGCCCTTGGCTGTATTCGTCGGGTGTAATAACCACAGAGCCACAGTCCTTTTTGGTTATGCATTGTTAGTAGATGAAACAAAGGAAACATATGATTGGGTGATTACATGCTTTCTGACCTCCATGCGTGGGAAAAAACCAATTTCGGTGATCACAAATAGTGATGATGCGATATGCAATGTGGTAACGAATTTGATACCAAGGGCTAGACACCGACTTTGTGCATGGCATGTCGGGAAAAATGTGTGTCAGCATTTGAAAGACGTGGATACACAGAGACACTTTTTCCATTTGATTTTTGCTGGACTTACTATTGAGGAATGGGAATTGGCTTGGCAGTACTTTGTGGCAATGAACCGGCTGGAAAACAATGAATGGGTGACTAGTATGTACAATAAACGTGAAAGCTGGGCGGAGGCCTTTTTTCGAGACCATTTTTTTGGAGGAATCTGCAGCACCCAACGATGTGACAGGATGCATAGAAATCTTGAAGAAGGTATTGACCGTTATATGAGGCTGTATGAGGTCTTGCCCCGGATGGAGAAAACAATTGAGCGGATAAGAAATCAGGTCCTACAGGATGATTACCAATCACAGAACTATGACCCTGTGTATGGCAGCCACATGCGTTGTTTGCAGGAGGAGATTGGGAAAAGGTTCACCCATGACATCTTTCTCTTAATCAAGGAGCAGATTAATTTTGAGTCCAAGTTTGTTATTGGGCCGAGAAGTGTTCATCCAAAAACTGGTGCGTCATTGATTTCGCTGATGCAATATGGAAAGCCTGAGCGGAGGTGGATTGTGTCGTACCAGCCTGATGAAAGCAATCCAACATTAGTGTGTTCTTGCAAACTGTTCGAGTCTGATGGAATTCCCTGTTGTCACATTTTTGCTGTCATGAAATTTGAGATGCTCACAACATTCCCAGAATCGTTGGTGAATAAAAGGTGGACAAAAGAAGCCACTGTTAAGACAGCAATATCGAGTTCCGGTTTGGTTAGTAACATGTCTGTGCAGATTGCACGGTATGGTGAATTGATGGCACAATGTGCTAAAATCTGCCATATTGCTTCCTATAGTGAGGAGGGGTACAATGAGATCAGAGAAGCTCTGAGCCAGCTGACCATACGATCCCAAAAGTACAGCAGTGAGAGTGAGTTTGAAAATGGTGTCCGTAGCCAAAGCCAGCCCATGAATTTGACTCATCACCTTGAAGAAGCCCGGGCATTTGAGTTTTTTGCTGGGTATGAGAAAAGTAAAAATGCCGCTTTGGACTCCCAAATTACTGGACTTCCAGATTTCTTTCAAAACTTCAGGCCCTTTCCCAATGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

892

Amino Acids

103.43

Weight (kDa)

6.73

Isoelectric Point (pI)

42.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 6 - 83 2.6e-23 Terpene synthase, N-terminal domain
FAR1 PF03101 196 - 319 3.1e-11 FAR1 DNA-binding domain
MULE PF10551 435 - 529 3.4e-18 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 255
AccB7I CCANNNNNTGG 2 cut(s) 955, 2090
AccBSI CCGCTC 2 cut(s) 1900, 2134
AccI GTMKAC 1 cut(s) 961
AciI CCGC 7 cut(s) 656, 1003, 1195, 1757, 1900, 2134, 2610
AclWI GGATC 3 cut(s) 423, 436, 2469
AcsI RAATTY 7 cut(s) 469, 929, 1180, 1534, 2214, 2246, 2539
AcuI CTGAAG 2 cut(s) 441, 2641
AdeI CACNNNGTG 2 cut(s) 1124, 2393
AfiI CCNNNNNNNGG 6 cut(s) 250, 909, 955, 1473, 1958, 2090
AflII CTTAAG 1 cut(s) 163
AflIII ACRYGT 1 cut(s) 2349
AhlI ACTAGT 2 cut(s) 661, 1727
AjiI CACGTC 1 cut(s) 1609
Alw21I GWGCWC 1 cut(s) 842
Alw26I GTCTC 2 cut(s) 1615, 1767
Alw44I GTGCAC 1 cut(s) 838
AlwI GGATC 3 cut(s) 423, 436, 2469
Ama87I CYCGRG 1 cut(s) 2565
AoxI GGCC 3 cut(s) 1761, 2066, 2660
ApaLI GTGCAC 1 cut(s) 838
ApeKI GCWGC 4 cut(s) 193, 297, 1797, 1962
ApoI RAATTY 7 cut(s) 469, 929, 1180, 1534, 2214, 2246, 2539
ArsI GACNNNNNNTTYG 6 cut(s) 666, 698, 1545, 1577, 1766, 1798
AseI ATTAAT 1 cut(s) 2040
Asp700I GAANNNNTTC 2 cut(s) 617, 2000
AspA2I CCTAGG 1 cut(s) 188
AspS9I GGNCC 6 cut(s) 409, 1000, 1198, 1915, 2066, 2661
AsuC2I CCSGG 3 cut(s) 1879, 2566, 2567
AsuII TTCGAA 1 cut(s) 982
AvaI CYCGRG 1 cut(s) 2565
AvaII GGWCC 4 cut(s) 409, 1000, 1198, 1915
AvrII CCTAGG 1 cut(s) 188
AxyI CCTNAGG 1 cut(s) 995
BaeGI GKGCMC 1 cut(s) 842
BamHI GGATCC 1 cut(s) 428
BanI GGYRCC 1 cut(s) 255
BanII GRGCYC 1 cut(s) 712
BbsI GAAGAC 1 cut(s) 679
Bbv12I GWGCWC 1 cut(s) 842
BbvI GCAGC 4 cut(s) 180, 309, 1809, 1974
BccI CCATC 8 cut(s) 11, 349, 469, 1142, 1259, 1876, 2204, 2377
BcgI CGANNNNNNTGC 4 cut(s) 1271, 1305, 2182, 2216
BciVI GTATCC 1 cut(s) 1606
BclI TGATCA 1 cut(s) 1494
BcnI CCSGG 3 cut(s) 1879, 2566, 2567
BcoDI GTCTC 2 cut(s) 1615, 1767
BcuI ACTAGT 2 cut(s) 661, 1727
BfaI CTAG 6 cut(s) 189, 212, 608, 662, 1551, 1728
BfmI CTRYAG 3 cut(s) 1795, 1919, 2419
BfrI CTTAAG 1 cut(s) 163
BfuI GTATCC 1 cut(s) 1606
BisI GCNGC 5 cut(s) 194, 298, 1798, 1963, 2610
BlnI CCTAGG 1 cut(s) 188
BlpI GCTNAGC 1 cut(s) 1014
BlsI GCNGC 5 cut(s) 195, 299, 1799, 1964, 2611
BmcAI AGTACT 2 cut(s) 436, 1685
Bme1390I CCNGG 3 cut(s) 1879, 2566, 2567
Bme18I GGWCC 4 cut(s) 409, 1000, 1198, 1915
BmeT110I CYCGRG 1 cut(s) 2565
BmgBI CACGTC 1 cut(s) 1609
BmgT120I GGNCC 6 cut(s) 409, 1000, 1198, 1915, 2066, 2661
BmiI GGNNCC 6 cut(s) 257, 411, 430, 1001, 1199, 1200
BmrFI CCNGG 3 cut(s) 1879, 2566, 2567
BoxI GACNNNNGTC 1 cut(s) 762
BpiI GAAGAC 1 cut(s) 679
BpmI CTGGAG 1 cut(s) 1104
Bpu10I CCTNAGC 2 cut(s) 966, 2130
Bpu1102I GCTNAGC 1 cut(s) 1014
Bpu14I TTCGAA 1 cut(s) 982
BpuEI CTTGAG 1 cut(s) 266
BpuMI CCSGG 3 cut(s) 1879, 2566, 2567
BsaI GGTCTC 1 cut(s) 1767
BsaJI CCNNGG 5 cut(s) 188, 1350, 1544, 1877, 2565
BsaWI WCCGGW 1 cut(s) 2333
Bsc4I CCNNNNNNNGG 6 cut(s) 250, 909, 955, 1473, 1958, 2090
Bse118I RCCGGY 1 cut(s) 1701
Bse1I ACTGG 3 cut(s) 432, 2095, 2635
Bse21I CCTNAGG 1 cut(s) 995
Bse3DI GCAATG 3 cut(s) 1197, 1528, 1701
BseDI CCNNGG 5 cut(s) 188, 1350, 1544, 1877, 2565
BseGI GGATG 9 cut(s) 184, 454, 1153, 1159, 1182, 1824, 1887, 1930, 2080
BseLI CCNNNNNNNGG 6 cut(s) 250, 909, 955, 1473, 1958, 2090
BseMI GCAATG 3 cut(s) 1197, 1528, 1701
BseMII CTCAG 6 cut(s) 939, 957, 1009, 1028, 2121, 2447
BseNI ACTGG 3 cut(s) 432, 2095, 2635
BseRI GAGGAG 4 cut(s) 374, 467, 2000, 2441
BseSI GKGCMC 1 cut(s) 842
BseXI GCAGC 4 cut(s) 180, 309, 1809, 1974
BseYI CCCAGC 2 cut(s) 1752, 2585
BsgI GTGCAG 2 cut(s) 316, 2378
BshFI GGCC 3 cut(s) 1763, 2068, 2662
BshNI GGYRCC 1 cut(s) 255
BsiHKAI GWGCWC 1 cut(s) 842
BsiHKCI CYCGRG 1 cut(s) 2565
BsiSI CCGG 4 cut(s) 1702, 1879, 2334, 2566
BslFI GGGAC 3 cut(s) 672, 1013, 1211
BslI CCNNNNNNNGG 6 cut(s) 250, 909, 955, 1473, 1958, 2090
BsmAI GTCTC 2 cut(s) 1615, 1767
BsmFI GGGAC 3 cut(s) 672, 1013, 1211
BsnI GGCC 3 cut(s) 1763, 2068, 2662
Bso31I GGTCTC 1 cut(s) 1767
BsoBI CYCGRG 1 cut(s) 2565
Bsp119I TTCGAA 1 cut(s) 982
Bsp1286I GDGCHC 2 cut(s) 712, 842
Bsp1407I TGTACA 2 cut(s) 500, 1734
Bsp143I GATC 5 cut(s) 428, 986, 1494, 2442, 2474
Bsp1720I GCTNAGC 1 cut(s) 1014
BspACI CCGC 7 cut(s) 656, 1003, 1195, 1757, 1900, 2134, 2610
BspANI GGCC 3 cut(s) 1763, 2068, 2662
BspCNI CTCAG 6 cut(s) 938, 958, 1008, 1027, 2122, 2448
BspHI TCATGA 1 cut(s) 2241
BspLI GGNNCC 6 cut(s) 257, 411, 430, 1001, 1199, 1200
BspMAI CTGCAG 1 cut(s) 1799
BspPI GGATC 3 cut(s) 423, 436, 2469
BspQI GCTCTTC 1 cut(s) 700
BspT104I TTCGAA 1 cut(s) 982
BspT107I GGYRCC 1 cut(s) 255
BspTI CTTAAG 1 cut(s) 163
BspTNI GGTCTC 1 cut(s) 1767
BsrBI CCGCTC 2 cut(s) 1900, 2134
BsrDI GCAATG 3 cut(s) 1197, 1528, 1701
BsrFI RCCGGY 1 cut(s) 1701
BsrGI TGTACA 2 cut(s) 500, 1734
BsrI ACTGG 3 cut(s) 432, 2095, 2635
BssAI RCCGGY 1 cut(s) 1701
BssECI CCNNGG 5 cut(s) 188, 1350, 1544, 1877, 2565
BssMI GATC 5 cut(s) 428, 986, 1494, 2442, 2474
BssT1I CCWWGG 3 cut(s) 188, 1350, 1544
Bst4CI ACNGT 8 cut(s) 653, 678, 1161, 1390, 1850, 2199, 2311, 2370
Bst6I CTCTTC 3 cut(s) 210, 474, 700
BstAFI CTTAAG 1 cut(s) 163
BstAPI GCANNNNNTGC 1 cut(s) 2393
BstAUI TGTACA 2 cut(s) 500, 1734
BstBI TTCGAA 1 cut(s) 982
BstC8I GCNNGC 4 cut(s) 1245, 1346, 2462, 2531
BstDEI CTNAG 7 cut(s) 770, 925, 966, 995, 1014, 2130, 2456
BstEII GGTNACC 1 cut(s) 20
BstF5I GGATG 9 cut(s) 184, 454, 1153, 1159, 1182, 1824, 1887, 1930, 2080
BstKTI GATC 5 cut(s) 431, 989, 1497, 2445, 2477
BstMAI GTCTC 2 cut(s) 1615, 1767
BstMBI GATC 5 cut(s) 428, 986, 1494, 2442, 2474
BstMWI GCNNNNNNNGC 6 cut(s) 58, 297, 700, 1267, 1978, 2393
BstNSI RCATGY 5 cut(s) 1053, 1455, 1577, 1972, 2353
BstPAI GACNNNNGTC 1 cut(s) 762
BstPI GGTNACC 1 cut(s) 20
BstSCI CCNGG 3 cut(s) 1877, 2564, 2565
BstSFI CTRYAG 3 cut(s) 1795, 1919, 2419
BstSLI GKGCMC 1 cut(s) 842
BstV1I GCAGC 4 cut(s) 180, 309, 1809, 1974
BstV2I GAAGAC 1 cut(s) 679
BstX2I RGATCY 1 cut(s) 428
BstXI CCANNNNNNTGG 2 cut(s) 1784, 2630
BstYI RGATCY 1 cut(s) 428
Bsu36I CCTNAGG 1 cut(s) 995
BsuI GTATCC 1 cut(s) 1606
BsuRI GGCC 3 cut(s) 1763, 2068, 2662
BtrI CACGTC 1 cut(s) 1609
BtsCI GGATG 9 cut(s) 184, 454, 1153, 1159, 1182, 1824, 1887, 1930, 2080
BtsI GCAGTG 3 cut(s) 842, 1327, 2497
BtsIMutI CAGTG 8 cut(s) 628, 817, 840, 842, 1228, 1327, 2307, 2497
Cac8I GCNNGC 4 cut(s) 1245, 1346, 2462, 2531
CciI TCATGA 1 cut(s) 2241
Cfr10I RCCGGY 1 cut(s) 1701
Cfr13I GGNCC 6 cut(s) 409, 1000, 1198, 1915, 2066, 2661
Cfr9I CCCGGG 1 cut(s) 2565
CseI GACGC 1 cut(s) 2085
CspCI CAANNNNNGTGG 4 cut(s) 226, 261, 1955, 1990
DdeI CTNAG 7 cut(s) 770, 925, 966, 995, 1014, 2130, 2456
DpnI GATC 5 cut(s) 430, 988, 1496, 2444, 2476
DpnII GATC 5 cut(s) 428, 986, 1494, 2442, 2474
DraIII CACNNNGTG 2 cut(s) 1124, 2393
Eam1104I CTCTTC 3 cut(s) 210, 474, 700
EarI CTCTTC 3 cut(s) 210, 474, 700
EciI GGCGGA 1 cut(s) 1772
Eco130I CCWWGG 3 cut(s) 188, 1350, 1544
Eco147I AGGCCT 1 cut(s) 1763
Eco24I GRGCYC 1 cut(s) 712
Eco31I GGTCTC 1 cut(s) 1767
Eco47I GGWCC 4 cut(s) 409, 1000, 1198, 1915
Eco57I CTGAAG 2 cut(s) 441, 2641
Eco81I CCTNAGG 1 cut(s) 995
Eco88I CYCGRG 1 cut(s) 2565
Eco91I GGTNACC 1 cut(s) 20
EcoO109I RGGNCCY 3 cut(s) 1198, 1915, 2661
EcoO65I GGTNACC 1 cut(s) 20
EcoRI GAATTC 2 cut(s) 929, 2214
EcoT14I CCWWGG 3 cut(s) 188, 1350, 1544
EcoT22I ATGCAT 3 cut(s) 1027, 1408, 1824
EcoT38I GRGCYC 1 cut(s) 712
ErhI CCWWGG 3 cut(s) 188, 1350, 1544
FalI AAGNNNNNCTT 4 cut(s) 116, 148, 207, 239
FaqI GGGAC 3 cut(s) 672, 1013, 1211
FauI CCCGC 2 cut(s) 649, 1188
FauNDI CATATG 1 cut(s) 1435
FbaI TGATCA 1 cut(s) 1494
FblI GTMKAC 1 cut(s) 961
Fnu4HI GCNGC 5 cut(s) 194, 298, 1798, 1963, 2610
FokI GGATG 9 cut(s) 171, 461, 1160, 1166, 1189, 1831, 1894, 1937, 2067
FriOI GRGCYC 1 cut(s) 712
Fsp4HI GCNGC 5 cut(s) 194, 298, 1798, 1963, 2610
FspBI CTAG 6 cut(s) 189, 212, 608, 662, 1551, 1728
GluI GCNGC 5 cut(s) 194, 298, 1798, 1963, 2610
GsaI CCCAGC 2 cut(s) 1756, 2589
GsuI CTGGAG 1 cut(s) 1104
HaeIII GGCC 3 cut(s) 1763, 2068, 2662
HapII CCGG 4 cut(s) 1702, 1879, 2334, 2566
HgaI GACGC 1 cut(s) 2085
HincII GTYRAC 2 cut(s) 791, 1278
HindII GTYRAC 2 cut(s) 791, 1278
HindIII AAGCTT 2 cut(s) 160, 166
HinfI GANTC 6 cut(s) 1791, 2048, 2204, 2273, 2545, 2618
HpaI GTTAAC 1 cut(s) 1278
HpaII CCGG 4 cut(s) 1702, 1879, 2334, 2566
Hpy188I TCNGA 7 cut(s) 448, 928, 1308, 1461, 2209, 2447, 2457
Hpy188III TCNNGA 7 cut(s) 308, 331, 1579, 1772, 1832, 2242, 2639
Hpy99I CGWCG 2 cut(s) 855, 1367
HpyAV CCTTC 5 cut(s) 419, 544, 607, 739, 1832
HpyCH4III ACNGT 8 cut(s) 653, 678, 1161, 1390, 1850, 2199, 2311, 2370
HpyCH4IV ACGT 2 cut(s) 1608, 1744
HpyF10VI GCNNNNNNNGC 6 cut(s) 58, 297, 700, 1267, 1978, 2393
HpyF3I CTNAG 7 cut(s) 770, 925, 966, 995, 1014, 2130, 2456
HpySE526I ACGT 2 cut(s) 1608, 1744
KflI GGGWCCC 1 cut(s) 1198
Ksp22I TGATCA 1 cut(s) 1494
KspAI GTTAAC 1 cut(s) 1278
Kzo9I GATC 5 cut(s) 428, 986, 1494, 2442, 2474
LguI GCTCTTC 1 cut(s) 700
LmnI GCTCC 1 cut(s) 2032
Lsp1109I GCAGC 4 cut(s) 180, 309, 1809, 1974
MaeI CTAG 6 cut(s) 189, 212, 608, 662, 1551, 1728
MaeII ACGT 2 cut(s) 1608, 1744
MaeIII GTNAC 7 cut(s) 20, 1168, 1528, 1723, 1811, 2225, 2345
MalI GATC 5 cut(s) 430, 988, 1496, 2444, 2476
MbiI CCGCTC 2 cut(s) 1900, 2134
MboI GATC 5 cut(s) 428, 986, 1494, 2442, 2474
MboII GAAGA 9 cut(s) 215, 227, 434, 491, 684, 717, 996, 1847, 2570
MfeI CAATTG 3 cut(s) 760, 777, 1893
MflI RGATCY 1 cut(s) 428
MhlI GDGCHC 2 cut(s) 712, 842
MlyI GAGTC 4 cut(s) 2057, 2213, 2539, 2612
MmeI TCCRAC 2 cut(s) 1081, 2198
Mph1103I ATGCAT 3 cut(s) 1027, 1408, 1824
MroXI GAANNNNTTC 2 cut(s) 617, 2000
MslI CAYNNNNRTG 3 cut(s) 948, 2182, 2354
MspA1I CMGCKG 1 cut(s) 2464
MspCI CTTAAG 1 cut(s) 163
MspI CCGG 4 cut(s) 1702, 1879, 2334, 2566
MspR9I CCNGG 3 cut(s) 1879, 2566, 2567
MunI CAATTG 3 cut(s) 760, 777, 1893
MwoI GCNNNNNNNGC 6 cut(s) 58, 297, 700, 1267, 1978, 2393
NciI CCSGG 3 cut(s) 1879, 2566, 2567
NdeI CATATG 1 cut(s) 1435
NdeII GATC 5 cut(s) 428, 986, 1494, 2442, 2474
NlaIV GGNNCC 6 cut(s) 257, 411, 430, 1001, 1199, 1200
NmeAIII GCCGAG 1 cut(s) 2094
NmuCI GTSAC 4 cut(s) 20, 1723, 1811, 2225
NsiI ATGCAT 3 cut(s) 1027, 1408, 1824
NspI RCATGY 5 cut(s) 1053, 1455, 1577, 1972, 2353
NspV TTCGAA 1 cut(s) 982
PagI TCATGA 1 cut(s) 2241
PceI AGGCCT 1 cut(s) 1763
PciI ACATGT 1 cut(s) 2349
PciSI GCTCTTC 1 cut(s) 700
PcsI WCGNNNNNNNCGW 1 cut(s) 979
PdmI GAANNNNTTC 2 cut(s) 617, 2000
PfeI GAWTC 2 cut(s) 1791, 2273
PflMI CCANNNNNTGG 2 cut(s) 955, 2090
PkrI GCNGC 5 cut(s) 195, 299, 1799, 1964, 2611
PleI GAGTC 4 cut(s) 2056, 2212, 2539, 2612
PpsI GAGTC 4 cut(s) 2056, 2212, 2539, 2612
PpuMI RGGWCCY 2 cut(s) 1198, 1915
PscI ACATGT 1 cut(s) 2349
PshAI GACNNNNGTC 1 cut(s) 762
PshBI ATTAAT 1 cut(s) 2040
Psp5II RGGWCCY 2 cut(s) 1198, 1915
PspEI GGTNACC 1 cut(s) 20
PspFI CCCAGC 2 cut(s) 1752, 2585
PspN4I GGNNCC 6 cut(s) 257, 411, 430, 1001, 1199, 1200
PspPI GGNCC 6 cut(s) 409, 1000, 1198, 1915, 2066, 2661
PspPPI RGGWCCY 2 cut(s) 1198, 1915
PstI CTGCAG 1 cut(s) 1799
PsuI RGATCY 1 cut(s) 428
PvuII CAGCTG 1 cut(s) 2464
RseI CAYNNNNRTG 3 cut(s) 948, 2182, 2354
SapI GCTCTTC 1 cut(s) 700
SatI GCNGC 5 cut(s) 194, 298, 1798, 1963, 2610
Sau3AI GATC 5 cut(s) 428, 986, 1494, 2442, 2474
Sau96I GGNCC 6 cut(s) 409, 1000, 1198, 1915, 2066, 2661
ScaI AGTACT 2 cut(s) 436, 1685
SchI GAGTC 4 cut(s) 2057, 2213, 2539, 2612
ScrFI CCNGG 3 cut(s) 1879, 2566, 2567
SduI GDGCHC 2 cut(s) 712, 842
SfcI CTRYAG 3 cut(s) 1795, 1919, 2419
SfuI TTCGAA 1 cut(s) 982
SinI GGWCC 4 cut(s) 409, 1000, 1198, 1915
SmaI CCCGGG 1 cut(s) 2567
SmiMI CAYNNNNRTG 3 cut(s) 948, 2182, 2354
SmlI CTYRAG 2 cut(s) 163, 245
SmoI CTYRAG 2 cut(s) 163, 245
SpeI ACTAGT 2 cut(s) 661, 1727
SrfI GCCCGGGC 1 cut(s) 2567
SseBI AGGCCT 1 cut(s) 1763
SsiI CCGC 7 cut(s) 656, 1003, 1195, 1757, 1900, 2134, 2610
SspI AATATT 1 cut(s) 11
SspMI CTAG 6 cut(s) 189, 212, 608, 662, 1551, 1728
StuI AGGCCT 1 cut(s) 1763
StyD4I CCNGG 3 cut(s) 1877, 2564, 2565
StyI CCWWGG 3 cut(s) 188, 1350, 1544
TaaI ACNGT 8 cut(s) 653, 678, 1161, 1390, 1850, 2199, 2311, 2370
TaiI ACGT 2 cut(s) 1611, 1747
TaqII GACCGA 1 cut(s) 399
TatI WGTACW 6 cut(s) 434, 500, 915, 1683, 1734, 2484
TauI GCSGC 1 cut(s) 2612
TfiI GAWTC 2 cut(s) 1791, 2273
TscAI CASTG 8 cut(s) 628, 817, 842, 847, 1228, 1327, 2314, 2497
TseFI GTSAC 4 cut(s) 20, 1723, 1811, 2225
TseI GCWGC 4 cut(s) 193, 297, 1797, 1962
Tsp45I GTSAC 4 cut(s) 20, 1723, 1811, 2225
TspGWI ACGGA 1 cut(s) 2507
TspMI CCCGGG 1 cut(s) 2565
TspRI CASTG 8 cut(s) 628, 817, 842, 847, 1228, 1327, 2314, 2497
Van91I CCANNNNNTGG 2 cut(s) 955, 2090
Vha464I CTTAAG 1 cut(s) 163
VneI GTGCAC 1 cut(s) 838
VpaK11BI GGWCC 4 cut(s) 409, 1000, 1198, 1915
VspI ATTAAT 1 cut(s) 2040
XapI RAATTY 7 cut(s) 469, 929, 1180, 1534, 2214, 2246, 2539
XceI RCATGY 5 cut(s) 1053, 1455, 1577, 1972, 2353
XmaI CCCGGG 1 cut(s) 2565
XmaJI CCTAGG 1 cut(s) 188
XmiI GTMKAC 1 cut(s) 961
XmnI GAANNNNTTC 2 cut(s) 617, 2000
XspI CTAG 6 cut(s) 189, 212, 608, 662, 1551, 1728
ZrmI AGTACT 2 cut(s) 436, 1685
Zsp2I ATGCAT 3 cut(s) 1027, 1408, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.