Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001881

Physical Location & Seq

Genomic Coordinates Reverse (-)

6280199 .. 6294420

Gene Structure 14222 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0047800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGAAGATGAATGGGTTCTACAATCTGCTTCTGGTGTTATGCACTACTATTTTTTCAGGGTTTGAAGTTGAAGCCTTACCCTATGATTACTCAGCAAGTATAGAGTGTTTAGCAAATCCTCAGAAACCCAAGTATGGTGGAGGTATCATTATAAACCCCGAGTTAAATGATGGGTTAAAAGGATGGACTTCTTTTGGCAAAGCAAAACTACAGCACACAGAATCACAGGGTAACAAATTCCTCGTGGCTCATAGTCGAATTCAACCGCATGATAGCATGTCTCAAAAGGTTTACTTACGAAGTGACAAGCTCTACACATTTTCTGCTTGGATAAAAGTGAGTACTGGTAGTGACGTTCCAGTAGCAGCTACTTTCAAGACAGCTTCTGGATTCAAACGTGCTGGTGAGATCATTGCAGAATCAAATTGTTGGTCCATGCTCAAGGGTGGTCTAACAGTTGAAGCTTCAGGCGCTGCGGAGCTCTACTTTGAGAGCAAGAACACCTCCGTTGAGATCTGGGTTGACAGCATCTCGTTGCAAGCATTCACCGAAAAGGAATGGAAGTCTCATCAAGATCGAAGCATTGCCAAGAATCGTAAGAGCAAAGTGCACATACAAGCAGTTGATGCAGAAGGAAATCCTCTGCCAAATGCAACTATCTCCATCCAACAAAACGTTCCAAGTTTCCCTTTTGGTTGTTCCATTACCAAGCTCATCCTCAACAACCCTGCCCACCAAAATTGGTTCACGTCAAGGTTCACAGTAACAACATTTGGGGATGAAATGAAATGGTACAGTACAGAGAGTATCCAGGGACGTGAGGACTACTCAGTAGCTGATGCCATGCTTCAGTTTGCAGAAGAAAACAACATTGCAGTCAGAGGCCACAATGTGTTCTGGGATGATCCGCAATACCAACTCAGTTGGGTCAAATCACTCGATACACATCAACTTATTAATGCAACTTACAAGAGGCTAAATTCTATCATGCAGAGATATAAAAGCAAGCTCATTGCCTGGGATGTTGTTAACGAAAATTTACATTGGAATTTCTTTGAAAGTAGGATGGGTGCAAATGCTTCAACAATTTTTTATAACTGGGCTATTAAAGCTGATGGAGAAACCCCCTTGTTCCTGAATGATTTTAATACCATTGAAGAGAGCAGAGATGGAGCATCCATGCCGGCTATGTACCTTCGAAAGCTCAGAGAGATTCAGAGCTTCCCAGGCAACAGTGGGGGACGGTTTGGGATTGGGCTTGAATCTCATTTCAATAGTAGTACTCCAAACCTTCCTTACATAAGAGCTTCTCTCGATACCCTTGGTGTTGCAAATGTGCCCATTTGGATCACTGAATTGGACGTGGCAAGCCATCTCGATCAGCCATTTTACTTGGAGCAGGTTCTAAGAGAGTTGCATTCTCACCCTCATATTCAAGGAATCATTATGTGGGCTGGACGGGGACCGAAAGGATGTTACAGAATGTGTTTGACAGATGAAAACTTCAACAACTTGCCAACTGGTGACGTTGTGGACAAGTTACTGCAGGAATGGGGTTATAGGAGCTCGGCTTCTTTCACAGCAGATGCCAATGGTTTCTTCGAGGCCTCTCTTCCCCATGGAGATTATGACATGAAGATCAGTCATTCTTCAGCGACGCATTCATCCATGGTTCACAAATTCAATGTGGCATCAATTACTATGTCTCTCCAATTTTCTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L38e

Protein Analysis

574

Amino Acids

64.51

Weight (kDa)

6.15

Isoelectric Point (pI)

37.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBM_4_9	PF02018	49 - 167	1.5e-07	Carbohydrate binding domain
Glyco_hydro_10	PF00331	229 - 485	8.3e-37	Glycosyl hydrolase family 10

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43460 AT3G59540
fragaria_vesca	FvH4_2g11140 FvH4_2g12030 FvH4_3g31637 FvH4_6g00180 FvH4_6g00180
malus_domestica	MD03G1210200.v1.1 MD04G1045900.v1.1 MD04G1247500.v1.1 MD05G1254000.v1.1 MD05G1339000.v1.1 MD11G1200200.v1.1 MD12G1262900.v1.1 MD13G1258200.v1.1 MD15G1353900.v1.1
prunus_persica	Prupe.1G193400_v2.0.a1 Prupe.1G198900_v2.0.a1 Prupe.6G363900_v2.0.a1 Prupe.7G035900_v2.0.a1
pyrus_communis	pycom04g21820 pycom12g24090
rosa_chinensis	RchiOBHm_Chr3g0447551 RchiOBHm_Chr6g0269441
rosa_laevigata	RLG00000025704
rosa_multiflora	Rmu_co8253789.1_g000001 Rmu_sc0000743.1_g000005 Rmu_sc0003550.1_g000008 Rmu_sc0027627.1_g000001 Rmu_sc0037294.1_g000003
rosa_roxburghii	Rroxscaffold_7G00198720
rosa_rugosa	Rorug02G0602700 Rorug02G0602800 Rorug05G0286200 Rorug05G0286200 Rorug06G0047800
rosa_samantha	Rh2CG566400 Rh3CG339700 Rh5CG368600 Rh5DG420000 Rh6CG167700 Rh6DG159700
rosa_wichuraiana	Rw2G024710 Rw3G000200 Rw5G036920 Rw6G014480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	152, 1095
Acc36I	ACCTGC	1 cut(s)	1390
AciI	CCGC	3 cut(s)	266, 476, 908
AclI	AACGTT	1 cut(s)	675
AclWI	GGATC	2 cut(s)	899, 1355
AcsI	RAATTY	6 cut(s)	236, 258, 979, 1036, 1048, 1679
AcuI	CTGAAG	3 cut(s)	450, 833, 1635
AdeI	CACNNNGTG	1 cut(s)	892
AfaI	GTAC	5 cut(s)	343, 794, 799, 1193, 1282
AfiI	CCNNNNNNNGG	1 cut(s)	134
AjiI	CACGTC	3 cut(s)	750, 818, 1363
AjnI	CCWGG	3 cut(s)	810, 1016, 1225
AjuI	GAANNNNNNNTTGG	4 cut(s)	660, 692, 1583, 1615
Alw21I	GWGCWC	3 cut(s)	483, 612, 1568
Alw26I	GTCTC	3 cut(s)	285, 570, 1710
Alw44I	GTGCAC	1 cut(s)	608
AlwI	GGATC	2 cut(s)	899, 1355
AlwNI	CAGNNNCTG	3 cut(s)	386, 473, 836
Ama87I	CYCGRG	1 cut(s)	158
AoxI	GGCC	2 cut(s)	883, 1605
ApaLI	GTGCAC	1 cut(s)	608
ApeKI	GCWGC	2 cut(s)	365, 473
ApoI	RAATTY	6 cut(s)	236, 258, 979, 1036, 1048, 1679
ArsI	GACNNNNNNTTYG	2 cut(s)	416, 448
AseI	ATTAAT	1 cut(s)	957
Asp700I	GAANNNNTTC	1 cut(s)	14
AspLEI	GCGC	1 cut(s)	473
AspS9I	GGNCC	2 cut(s)	432, 1463
AsuHPI	GGTGA	4 cut(s)	416, 538, 1415, 1535
AsuII	TTCGAA	1 cut(s)	1198
AvaI	CYCGRG	1 cut(s)	158
AvaII	GGWCC	2 cut(s)	432, 1463
BaeGI	GKGCMC	2 cut(s)	612, 1341
BanII	GRGCYC	2 cut(s)	483, 1568
BauI	CACGAG	1 cut(s)	242
Bbv12I	GWGCWC	3 cut(s)	483, 612, 1568
BbvI	GCAGC	2 cut(s)	377, 460
BccI	CCATC	7 cut(s)	164, 177, 671, 1060, 1109, 1163, 1380
BciT130I	CCWGG	3 cut(s)	812, 1018, 1227
BciVI	GTATCC	1 cut(s)	818
BcoDI	GTCTC	3 cut(s)	285, 570, 1710
BfmI	CTRYAG	2 cut(s)	209, 1544
BfoI	RGCGCY	1 cut(s)	474
BfuAI	ACCTGC	1 cut(s)	1390
BfuI	GTATCC	1 cut(s)	818
BglII	AGATCT	1 cut(s)	513
BisI	GCNGC	2 cut(s)	366, 474
BlsI	GCNGC	2 cut(s)	367, 475
BmcAI	AGTACT	2 cut(s)	343, 1282
Bme1390I	CCNGG	3 cut(s)	812, 1018, 1227
Bme18I	GGWCC	2 cut(s)	432, 1463
BmeT110I	CYCGRG	1 cut(s)	158
BmgBI	CACGTC	3 cut(s)	750, 818, 1363
BmgT120I	GGNCC	2 cut(s)	432, 1463
BmiI	GGNNCC	1 cut(s)	1464
BmrFI	CCNGG	3 cut(s)	812, 1018, 1227
BmrI	ACTGGG	1 cut(s)	1108
BmsI	GCATC	6 cut(s)	537, 616, 829, 1184, 1576, 1700
BmuI	ACTGGG	1 cut(s)	1108
BplI	GAGNNNNNCTC	4 cut(s)	812, 844, 1296, 1328
Bpu14I	TTCGAA	1 cut(s)	1198
BpuEI	CTTGAG	1 cut(s)	425
BsaBI	GATNNNNATC	1 cut(s)	945
BsaJI	CCNNGG	6 cut(s)	811, 1017, 1225, 1321, 1618, 1668
Bsc4I	CCNNNNNNNGG	1 cut(s)	134
Bse118I	RCCGGY	1 cut(s)	1183
Bse1I	ACTGG	4 cut(s)	349, 359, 1103, 1525
Bse3DI	GCAATG	4 cut(s)	411, 582, 870, 1011
Bse8I	GATNNNNATC	1 cut(s)	945
BseBI	CCWGG	3 cut(s)	812, 1018, 1227
BseDI	CCNNGG	6 cut(s)	811, 1017, 1225, 1321, 1618, 1668
BseJI	GATNNNNATC	1 cut(s)	945
BseLI	CCNNNNNNNGG	1 cut(s)	134
BseMI	GCAATG	4 cut(s)	411, 582, 870, 1011
BseMII	CTCAG	5 cut(s)	105, 134, 843, 934, 1219
BseNI	ACTGG	4 cut(s)	349, 359, 1103, 1525
BseSI	GKGCMC	2 cut(s)	612, 1341
BseXI	GCAGC	2 cut(s)	377, 460
BshFI	GGCC	2 cut(s)	885, 1607
BsiHKAI	GWGCWC	3 cut(s)	483, 612, 1568
BsiHKCI	CYCGRG	1 cut(s)	158
BsiSI	CCGG	1 cut(s)	1184
BslFI	GGGAC	3 cut(s)	828, 1254, 1476
BslI	CCNNNNNNNGG	1 cut(s)	134
BsmAI	GTCTC	3 cut(s)	285, 570, 1710
BsmFI	GGGAC	3 cut(s)	828, 1254, 1476
BsmI	GAATGC	3 cut(s)	542, 1417, 1660
BsnI	GGCC	2 cut(s)	885, 1607
BsoBI	CYCGRG	1 cut(s)	158
Bsp119I	TTCGAA	1 cut(s)	1198
Bsp1286I	GDGCHC	4 cut(s)	483, 612, 1341, 1568
Bsp143I	GATC	7 cut(s)	408, 513, 574, 904, 1347, 1378, 1638
Bsp19I	CCATGG	2 cut(s)	1618, 1668
BspACI	CCGC	3 cut(s)	266, 476, 908
BspANI	GGCC	2 cut(s)	885, 1607
BspCNI	CTCAG	5 cut(s)	104, 133, 842, 933, 1218
BspLI	GGNNCC	1 cut(s)	1464
BspMAI	CTGCAG	1 cut(s)	1548
BspMI	ACCTGC	1 cut(s)	1390
BspPI	GGATC	2 cut(s)	899, 1355
BspT104I	TTCGAA	1 cut(s)	1198
BsrDI	GCAATG	4 cut(s)	411, 582, 870, 1011
BsrFI	RCCGGY	1 cut(s)	1183
BsrI	ACTGG	4 cut(s)	349, 359, 1103, 1525
BssAI	RCCGGY	1 cut(s)	1183
BssECI	CCNNGG	6 cut(s)	811, 1017, 1225, 1321, 1618, 1668
BssMI	GATC	7 cut(s)	408, 513, 574, 904, 1347, 1378, 1638
BssSI	CACGAG	1 cut(s)	242
BssT1I	CCWWGG	3 cut(s)	1321, 1618, 1668
Bst2BI	CACGAG	1 cut(s)	242
Bst2UI	CCWGG	3 cut(s)	812, 1018, 1227
Bst4CI	ACNGT	5 cut(s)	457, 763, 797, 1235, 1245
Bst6I	CTCTTC	2 cut(s)	1152, 1617
BstAPI	GCANNNNNTGC	1 cut(s)	626
BstBI	TTCGAA	1 cut(s)	1198
BstC8I	GCNNGC	4 cut(s)	540, 1007, 1185, 1369
BstDEI	CTNAG	6 cut(s)	91, 120, 829, 920, 1205, 1406
BstDSI	CCRYGG	2 cut(s)	1618, 1668
BstH2I	RGCGCY	1 cut(s)	474
BstHHI	GCGC	1 cut(s)	473
BstKTI	GATC	7 cut(s)	411, 516, 577, 907, 1350, 1381, 1641
BstMAI	GTCTC	3 cut(s)	285, 570, 1710
BstMBI	GATC	7 cut(s)	408, 513, 574, 904, 1347, 1378, 1638
BstMWI	GCNNNNNNNGC	4 cut(s)	470, 626, 1109, 1227
BstNI	CCWGG	3 cut(s)	812, 1018, 1227
BstNSI	RCATGY	1 cut(s)	280
BstSCI	CCNGG	3 cut(s)	810, 1016, 1225
BstSFI	CTRYAG	2 cut(s)	209, 1544
BstSLI	GKGCMC	2 cut(s)	612, 1341
BstV1I	GCAGC	2 cut(s)	377, 460
BstX2I	RGATCY	1 cut(s)	513
BstYI	RGATCY	1 cut(s)	513
BsuI	GTATCC	1 cut(s)	818
BsuRI	GGCC	2 cut(s)	885, 1607
BtgI	CCRYGG	2 cut(s)	1618, 1668
BtrI	CACGTC	3 cut(s)	750, 818, 1363
BtsIMutI	CAGTG	2 cut(s)	1240, 1350
BveI	ACCTGC	1 cut(s)	1390
Cac8I	GCNNGC	4 cut(s)	540, 1007, 1185, 1369
CaiI	CAGNNNCTG	3 cut(s)	386, 473, 836
CfoI	GCGC	1 cut(s)	473
Cfr10I	RCCGGY	1 cut(s)	1183
Cfr13I	GGNCC	2 cut(s)	432, 1463
CseI	GACGC	1 cut(s)	1666
Csp6I	GTAC	5 cut(s)	342, 793, 798, 1192, 1281
CspCI	CAANNNNNGTGG	4 cut(s)	118, 153, 722, 757
CviAII	CATG	9 cut(s)	269, 277, 436, 844, 988, 1180, 1619, 1633, 1669
CviQI	GTAC	5 cut(s)	342, 793, 798, 1192, 1281
DdeI	CTNAG	6 cut(s)	91, 120, 829, 920, 1205, 1406
DpnI	GATC	7 cut(s)	410, 515, 576, 906, 1349, 1380, 1640
DpnII	GATC	7 cut(s)	408, 513, 574, 904, 1347, 1378, 1638
DraIII	CACNNNGTG	1 cut(s)	892
Eam1104I	CTCTTC	2 cut(s)	1152, 1617
EarI	CTCTTC	2 cut(s)	1152, 1617
Ecl136II	GAGCTC	2 cut(s)	481, 1566
Eco130I	CCWWGG	3 cut(s)	1321, 1618, 1668
Eco147I	AGGCCT	1 cut(s)	1607
Eco24I	GRGCYC	2 cut(s)	483, 1568
Eco47I	GGWCC	2 cut(s)	432, 1463
Eco53kI	GAGCTC	2 cut(s)	481, 1566
Eco57I	CTGAAG	3 cut(s)	450, 833, 1635
Eco88I	CYCGRG	1 cut(s)	158
EcoICRI	GAGCTC	2 cut(s)	481, 1566
EcoRI	GAATTC	1 cut(s)	258
EcoRII	CCWGG	3 cut(s)	810, 1016, 1225
EcoT14I	CCWWGG	3 cut(s)	1321, 1618, 1668
EcoT38I	GRGCYC	2 cut(s)	483, 1568
ErhI	CCWWGG	3 cut(s)	1321, 1618, 1668
FaeI	CATG	9 cut(s)	272, 280, 439, 847, 991, 1183, 1622, 1636, 1672
FalI	AAGNNNNNCTT	4 cut(s)	278, 310, 673, 705
FaqI	GGGAC	3 cut(s)	828, 1254, 1476
FatI	CATG	9 cut(s)	268, 276, 435, 843, 987, 1179, 1618, 1632, 1668
Fnu4HI	GCNGC	2 cut(s)	366, 474
FriOI	GRGCYC	2 cut(s)	483, 1568
Fsp4HI	GCNGC	2 cut(s)	366, 474
GlaI	GCGC	1 cut(s)	472
GluI	GCNGC	2 cut(s)	366, 474
HaeII	RGCGCY	1 cut(s)	474
HaeIII	GGCC	2 cut(s)	885, 1607
HapII	CCGG	1 cut(s)	1184
HgaI	GACGC	1 cut(s)	1666
HhaI	GCGC	1 cut(s)	473
Hin1II	CATG	9 cut(s)	272, 280, 439, 847, 991, 1183, 1622, 1636, 1672
Hin6I	GCGC	1 cut(s)	471
HinP1I	GCGC	1 cut(s)	471
HincII	GTYRAC	2 cut(s)	523, 1030
HindII	GTYRAC	2 cut(s)	523, 1030
HindIII	AAGCTT	1 cut(s)	462
HinfI	GANTC	7 cut(s)	221, 390, 419, 592, 1213, 1262, 1440
HpaI	GTTAAC	1 cut(s)	1030
HpaII	CCGG	1 cut(s)	1184
HphI	GGTGA	4 cut(s)	416, 538, 1415, 1535
Hpy166II	GTNNAC	8 cut(s)	292, 523, 610, 747, 759, 1030, 1534, 1675
Hpy188I	TCNGA	4 cut(s)	123, 881, 1208, 1218
Hpy188III	TCNNGA	6 cut(s)	376, 387, 572, 1135, 1313, 1376
Hpy8I	GTNNAC	8 cut(s)	292, 523, 610, 747, 759, 1030, 1534, 1675
Hpy99I	CGWCG	1 cut(s)	1660
HpyAV	CCTTC	3 cut(s)	626, 1205, 1301
HpyCH4III	ACNGT	5 cut(s)	457, 763, 797, 1235, 1245
HpyCH4IV	ACGT	7 cut(s)	354, 397, 675, 749, 817, 1362, 1527
HpyF10VI	GCNNNNNNNGC	4 cut(s)	470, 626, 1109, 1227
HpyF3I	CTNAG	6 cut(s)	91, 120, 829, 920, 1205, 1406
HpySE526I	ACGT	7 cut(s)	354, 397, 675, 749, 817, 1362, 1527
Hsp92II	CATG	9 cut(s)	272, 280, 439, 847, 991, 1183, 1622, 1636, 1672
HspAI	GCGC	1 cut(s)	471
KroI	GCCGGC	1 cut(s)	1183
KroNI	GCCGGC	1 cut(s)	1185
KspAI	GTTAAC	1 cut(s)	1030
Kzo9I	GATC	7 cut(s)	408, 513, 574, 904, 1347, 1378, 1638
LmnI	GCTCC	4 cut(s)	478, 1172, 1396, 1563
Lsp1109I	GCAGC	2 cut(s)	377, 460
LweI	GCATC	6 cut(s)	537, 616, 829, 1184, 1576, 1700
MaeII	ACGT	7 cut(s)	354, 397, 675, 749, 817, 1362, 1527
MaeIII	GTNAC	7 cut(s)	230, 302, 350, 763, 1475, 1523, 1539
MalI	GATC	7 cut(s)	410, 515, 576, 906, 1349, 1380, 1640
MboI	GATC	7 cut(s)	408, 513, 574, 904, 1347, 1378, 1638
MboII	GAAGA	7 cut(s)	16, 872, 1169, 1591, 1604, 1641, 1648
MflI	RGATCY	1 cut(s)	513
MhlI	GDGCHC	4 cut(s)	483, 612, 1341, 1568
MmeI	TCCRAC	1 cut(s)	691
MroNI	GCCGGC	1 cut(s)	1183
MroXI	GAANNNNTTC	1 cut(s)	14
MseI	TTAA	6 cut(s)	164, 176, 957, 1029, 1107, 1146
MspI	CCGG	1 cut(s)	1184
MspR9I	CCNGG	3 cut(s)	812, 1018, 1227
Mva1269I	GAATGC	3 cut(s)	542, 1417, 1660
MvaI	CCWGG	3 cut(s)	812, 1018, 1227
MwoI	GCNNNNNNNGC	4 cut(s)	470, 626, 1109, 1227
NaeI	GCCGGC	1 cut(s)	1185
NcoI	CCATGG	2 cut(s)	1618, 1668
NdeII	GATC	7 cut(s)	408, 513, 574, 904, 1347, 1378, 1638
NgoMIV	GCCGGC	1 cut(s)	1183
NlaIII	CATG	9 cut(s)	272, 280, 439, 847, 991, 1183, 1622, 1636, 1672
NlaIV	GGNNCC	1 cut(s)	1464
NmeAIII	GCCGAG	1 cut(s)	1547
NmuCI	GTSAC	3 cut(s)	302, 350, 1523
NspI	RCATGY	1 cut(s)	280
NspV	TTCGAA	1 cut(s)	1198
PceI	AGGCCT	1 cut(s)	1607
PctI	GAATGC	3 cut(s)	542, 1417, 1660
PdiI	GCCGGC	1 cut(s)	1185
PdmI	GAANNNNTTC	1 cut(s)	14
PfeI	GAWTC	7 cut(s)	221, 390, 419, 592, 1213, 1262, 1440
PkrI	GCNGC	2 cut(s)	367, 475
PshBI	ATTAAT	1 cut(s)	957
PsiI	TTATAA	2 cut(s)	152, 1095
Psp124BI	GAGCTC	2 cut(s)	483, 1568
Psp1406I	AACGTT	1 cut(s)	675
Psp6I	CCWGG	3 cut(s)	810, 1016, 1225
PspGI	CCWGG	3 cut(s)	810, 1016, 1225
PspN4I	GGNNCC	1 cut(s)	1464
PspPI	GGNCC	2 cut(s)	432, 1463
PstI	CTGCAG	1 cut(s)	1548
PstNI	CAGNNNCTG	3 cut(s)	386, 473, 836
PsuI	RGATCY	1 cut(s)	513
RsaI	GTAC	5 cut(s)	343, 794, 799, 1193, 1282
RsaNI	GTAC	5 cut(s)	342, 793, 798, 1192, 1281
SacI	GAGCTC	2 cut(s)	483, 1568
SaqAI	TTAA	6 cut(s)	164, 176, 957, 1029, 1107, 1146
SatI	GCNGC	2 cut(s)	366, 474
Sau3AI	GATC	7 cut(s)	408, 513, 574, 904, 1347, 1378, 1638
Sau96I	GGNCC	2 cut(s)	432, 1463
ScaI	AGTACT	2 cut(s)	343, 1282
ScrFI	CCNGG	3 cut(s)	812, 1018, 1227
SduI	GDGCHC	4 cut(s)	483, 612, 1341, 1568
SfaNI	GCATC	6 cut(s)	537, 616, 829, 1184, 1576, 1700
SfcI	CTRYAG	2 cut(s)	209, 1544
SfuI	TTCGAA	1 cut(s)	1198
SinI	GGWCC	2 cut(s)	432, 1463
SmlI	CTYRAG	1 cut(s)	440
SmoI	CTYRAG	1 cut(s)	440
SseBI	AGGCCT	1 cut(s)	1607
SsiI	CCGC	3 cut(s)	266, 476, 908
SstI	GAGCTC	2 cut(s)	483, 1568
StuI	AGGCCT	1 cut(s)	1607
StyD4I	CCNGG	3 cut(s)	810, 1016, 1225
StyI	CCWWGG	3 cut(s)	1321, 1618, 1668
TaaI	ACNGT	5 cut(s)	457, 763, 797, 1235, 1245
TaiI	ACGT	7 cut(s)	357, 400, 678, 752, 820, 1365, 1530
TaqI	TCGA	7 cut(s)	256, 577, 939, 1198, 1314, 1377, 1602
TaqII	GACCGA	1 cut(s)	1480
TatI	WGTACW	3 cut(s)	341, 797, 1280
TfiI	GAWTC	7 cut(s)	221, 390, 419, 592, 1213, 1262, 1440
Tru1I	TTAA	6 cut(s)	164, 176, 957, 1029, 1107, 1146
Tru9I	TTAA	6 cut(s)	164, 176, 957, 1029, 1107, 1146
TscAI	CASTG	2 cut(s)	1240, 1357
TseFI	GTSAC	3 cut(s)	302, 350, 1523
TseI	GCWGC	2 cut(s)	365, 473
Tsp45I	GTSAC	3 cut(s)	302, 350, 1523
TspDTI	ATGAA	7 cut(s)	17, 23, 795, 800, 1512, 1649, 1653
TspGWI	ACGGA	1 cut(s)	496
TspRI	CASTG	2 cut(s)	1240, 1357
VneI	GTGCAC	1 cut(s)	608
VpaK11BI	GGWCC	2 cut(s)	432, 1463
VspI	ATTAAT	1 cut(s)	957
XapI	RAATTY	6 cut(s)	236, 258, 979, 1036, 1048, 1679
XceI	RCATGY	1 cut(s)	280
XmnI	GAANNNNTTC	1 cut(s)	14
ZrmI	AGTACT	2 cut(s)	343, 1282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.