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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g02790 |
| rosa_laevigata | RLG00000028661 RLG00000030349 RLG00000030352 RLG00000030356 RLG00000030371 RLG00000030378 RLG00000030380 RLG00000030384 RLG00000030386 RLG00000030388 |
| rosa_multiflora | Rmu_sc0000749.1_g000030 Rmu_sc0000749.1_g000053 Rmu_sc0001932.1_g000014 Rmu_sc0001932.1_g000030 Rmu_sc0002132.1_g000050 Rmu_sc0002263.1_g000033 Rmu_sc0004185.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00327000 Rroxscaffold_4G00327020 Rroxscaffold_4G00327130 Rroxscaffold_4G00327210 |
| rosa_rugosa | Rorug01G0035600 Rorug01G0035800 Rorug06G0044400 |
| rosa_samantha | Rh1AG048700 Rh1AG048800 Rh1AG048900 Rh1AG050900 Rh1AG051400 Rh1AG051700 Rh1AG051800 Rh1AG052300 Rh1AG053000 Rh1AG053100 Rh1AG053900 Rh1BG046300 Rh1CG018200 Rh1CG052600 Rh1CG052700 Rh1CG052900 Rh1CG053300 Rh1CG053400 Rh2AG524800 |
| rosa_wichuraiana | Rw1G004420 Rw1G004460 Rw1G004520 Rw1G004600 Rw1G004650 Rw1G004690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 152 |
| AciI | CCGC | 2 cut(s) | 26, 30 |
| AcoI | YGGCCR | 1 cut(s) | 27 |
| AcsI | RAATTY | 2 cut(s) | 170, 183 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 210 |
| AflIII | ACRYGT | 1 cut(s) | 142 |
| AgsI | TTSAA | 4 cut(s) | 95, 139, 176, 197 |
| AluBI | AGCT | 2 cut(s) | 131, 222 |
| AluI | AGCT | 2 cut(s) | 131, 222 |
| AoxI | GGCC | 1 cut(s) | 27 |
| ApeKI | GCWGC | 2 cut(s) | 20, 23 |
| ApoI | RAATTY | 2 cut(s) | 170, 183 |
| BbvI | GCAGC | 2 cut(s) | 32, 35 |
| BccI | CCATC | 1 cut(s) | 68 |
| BfaI | CTAG | 2 cut(s) | 128, 188 |
| BisI | GCNGC | 4 cut(s) | 21, 24, 27, 30 |
| BlsI | GCNGC | 4 cut(s) | 22, 25, 28, 31 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 210 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 210 |
| BseX3I | CGGCCG | 1 cut(s) | 27 |
| BseXI | GCAGC | 2 cut(s) | 32, 35 |
| Bsh1236I | CGCG | 1 cut(s) | 152 |
| Bsh1285I | CGRYCG | 1 cut(s) | 30 |
| BshFI | GGCC | 1 cut(s) | 29 |
| BsiEI | CGRYCG | 1 cut(s) | 30 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 210 |
| BsnI | GGCC | 1 cut(s) | 29 |
| Bsp143I | GATC | 1 cut(s) | 165 |
| BspACI | CCGC | 2 cut(s) | 26, 30 |
| BspANI | GGCC | 1 cut(s) | 29 |
| BspFNI | CGCG | 1 cut(s) | 152 |
| BssMI | GATC | 1 cut(s) | 165 |
| BstC8I | GCNNGC | 1 cut(s) | 18 |
| BstDEI | CTNAG | 1 cut(s) | 53 |
| BstFNI | CGCG | 1 cut(s) | 152 |
| BstKTI | GATC | 1 cut(s) | 168 |
| BstMBI | GATC | 1 cut(s) | 165 |
| BstMCI | CGRYCG | 1 cut(s) | 30 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 26, 29 |
| BstUI | CGCG | 1 cut(s) | 152 |
| BstV1I | GCAGC | 2 cut(s) | 32, 35 |
| BstZI | CGGCCG | 1 cut(s) | 27 |
| BsuRI | GGCC | 1 cut(s) | 29 |
| Cac8I | GCNNGC | 1 cut(s) | 18 |
| CciNI | GCGGCCGC | 1 cut(s) | 27 |
| CviAII | CATG | 1 cut(s) | 10 |
| CviJI | RGCY | 6 cut(s) | 8, 16, 29, 131, 157, 222 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 16, 29, 131, 157, 222 |
| DdeI | CTNAG | 1 cut(s) | 53 |
| DpnI | GATC | 1 cut(s) | 167 |
| DpnII | GATC | 1 cut(s) | 165 |
| EaeI | YGGCCR | 1 cut(s) | 27 |
| EagI | CGGCCG | 1 cut(s) | 27 |
| EclXI | CGGCCG | 1 cut(s) | 27 |
| Eco52I | CGGCCG | 1 cut(s) | 27 |
| FaeI | CATG | 1 cut(s) | 13 |
| FaiI | YATR | 1 cut(s) | 11 |
| FatI | CATG | 1 cut(s) | 9 |
| Fnu4HI | GCNGC | 4 cut(s) | 21, 24, 27, 30 |
| Fsp4HI | GCNGC | 4 cut(s) | 21, 24, 27, 30 |
| FspBI | CTAG | 2 cut(s) | 128, 188 |
| GluI | GCNGC | 4 cut(s) | 21, 24, 27, 30 |
| HaeIII | GGCC | 1 cut(s) | 29 |
| Hin1II | CATG | 1 cut(s) | 13 |
| HincII | GTYRAC | 1 cut(s) | 148 |
| HindII | GTYRAC | 1 cut(s) | 148 |
| HinfI | GANTC | 3 cut(s) | 76, 83, 124 |
| HpaI | GTTAAC | 1 cut(s) | 148 |
| Hpy166II | GTNNAC | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 2 cut(s) | 73, 80 |
| Hpy8I | GTNNAC | 1 cut(s) | 148 |
| HpyAV | CCTTC | 2 cut(s) | 113, 145 |
| HpyCH4IV | ACGT | 1 cut(s) | 144 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 26, 29 |
| HpyF3I | CTNAG | 1 cut(s) | 53 |
| HpySE526I | ACGT | 1 cut(s) | 144 |
| Hsp92II | CATG | 1 cut(s) | 13 |
| KspAI | GTTAAC | 1 cut(s) | 148 |
| Kzo9I | GATC | 1 cut(s) | 165 |
| LpnPI | CCDG | 4 cut(s) | 30, 58, 93, 176 |
| Lsp1109I | GCAGC | 2 cut(s) | 32, 35 |
| MaeI | CTAG | 2 cut(s) | 128, 188 |
| MaeII | ACGT | 1 cut(s) | 144 |
| MalI | GATC | 1 cut(s) | 167 |
| MboI | GATC | 1 cut(s) | 165 |
| MluCI | AATT | 4 cut(s) | 95, 170, 183, 207 |
| MnlI | CCTC | 2 cut(s) | 49, 168 |
| MseI | TTAA | 1 cut(s) | 147 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| MvnI | CGCG | 1 cut(s) | 152 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 26, 29 |
| NdeII | GATC | 1 cut(s) | 165 |
| NlaIII | CATG | 1 cut(s) | 13 |
| NotI | GCGGCCGC | 1 cut(s) | 27 |
| PfeI | GAWTC | 3 cut(s) | 76, 83, 124 |
| PkrI | GCNGC | 4 cut(s) | 22, 25, 28, 31 |
| SaqAI | TTAA | 1 cut(s) | 147 |
| SatI | GCNGC | 4 cut(s) | 21, 24, 27, 30 |
| Sau3AI | GATC | 1 cut(s) | 165 |
| SetI | ASST | 4 cut(s) | 50, 133, 147, 224 |
| Sse9I | AATT | 4 cut(s) | 95, 170, 183, 207 |
| SsiI | CCGC | 2 cut(s) | 26, 30 |
| SspMI | CTAG | 2 cut(s) | 128, 188 |
| TaiI | ACGT | 1 cut(s) | 147 |
| TasI | AATT | 4 cut(s) | 95, 170, 183, 207 |
| TauI | GCSGC | 2 cut(s) | 29, 32 |
| TfiI | GAWTC | 3 cut(s) | 76, 83, 124 |
| Tru1I | TTAA | 1 cut(s) | 147 |
| Tru9I | TTAA | 1 cut(s) | 147 |
| TseI | GCWGC | 2 cut(s) | 20, 23 |
| TspDTI | ATGAA | 1 cut(s) | 26 |
| XapI | RAATTY | 2 cut(s) | 170, 183 |
| XspI | CTAG | 2 cut(s) | 128, 188 |