Villin headpiece domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097701 RchiOBHm_Chr6g0292791 |
| rosa_laevigata | RLG00000015275 RLG00000021547 RLG00000030592 |
| rosa_roxburghii | Rroxscaffold_1G00036680 Rroxscaffold_1G00041910 Rroxscaffold_4G00298950 |
| rosa_samantha | Rh1BG038600 Rh1BG413300 Rh1CG442700 Rh1DG446300 Rh2AG239900 Rh2AG454600 Rh2BG458800 Rh2CG329000 Rh2CG441700 Rh2DG247800 Rh3AG319400 Rh3DG074200 Rh3DG253400 Rh4AG134000 Rh4CG324700 Rh4DG018300 Rh5BG409600 Rh5CG361100 Rh5CG434400 Rh5DG243200 Rh6AG347300 Rh6CG028700 Rh6CG148300 Rh6CG361100 Rh6DG027800 Rh7AG187400 Rh7BG242700 |
| rosa_wichuraiana | Rw0G008450 Rw2G012270 Rw4G030630 Rw5G021380 Rw5G046710 Rw6G001850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 128 |
| AcuI | CTGAAG | 1 cut(s) | 183 |
| AdeI | CACNNNGTG | 1 cut(s) | 83 |
| AfaI | GTAC | 1 cut(s) | 288 |
| AgsI | TTSAA | 1 cut(s) | 184 |
| AjnI | CCWGG | 1 cut(s) | 175 |
| AluBI | AGCT | 2 cut(s) | 10, 302 |
| AluI | AGCT | 2 cut(s) | 10, 302 |
| Alw21I | GWGCWC | 1 cut(s) | 79 |
| Alw44I | GTGCAC | 1 cut(s) | 75 |
| AlwI | GGATC | 1 cut(s) | 128 |
| ApaLI | GTGCAC | 1 cut(s) | 75 |
| AsuHPI | GGTGA | 1 cut(s) | 95 |
| BaeGI | GKGCMC | 1 cut(s) | 79 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 156, 188 |
| Bbv12I | GWGCWC | 1 cut(s) | 79 |
| BciT130I | CCWGG | 1 cut(s) | 177 |
| BciVI | GTATCC | 1 cut(s) | 116 |
| BfaI | CTAG | 1 cut(s) | 5 |
| BfuI | GTATCC | 1 cut(s) | 116 |
| Bme1390I | CCNGG | 1 cut(s) | 177 |
| BmrFI | CCNGG | 1 cut(s) | 177 |
| BpmI | CTGGAG | 1 cut(s) | 91 |
| BseBI | CCWGG | 1 cut(s) | 177 |
| BseSI | GKGCMC | 1 cut(s) | 79 |
| BsiHKAI | GWGCWC | 1 cut(s) | 79 |
| Bsp1286I | GDGCHC | 1 cut(s) | 79 |
| Bsp1407I | TGTACA | 1 cut(s) | 286 |
| Bsp143I | GATC | 1 cut(s) | 133 |
| BspHI | TCATGA | 1 cut(s) | 237 |
| BspPI | GGATC | 1 cut(s) | 128 |
| BsrGI | TGTACA | 1 cut(s) | 286 |
| BssMI | GATC | 1 cut(s) | 133 |
| Bst2UI | CCWGG | 1 cut(s) | 177 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 98 |
| BstAUI | TGTACA | 1 cut(s) | 286 |
| BstC8I | GCNNGC | 1 cut(s) | 30 |
| BstKTI | GATC | 1 cut(s) | 136 |
| BstMBI | GATC | 1 cut(s) | 133 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 98 |
| BstNI | CCWGG | 1 cut(s) | 177 |
| BstSCI | CCNGG | 1 cut(s) | 175 |
| BstSLI | GKGCMC | 1 cut(s) | 79 |
| BsuI | GTATCC | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 45 |
| Cac8I | GCNNGC | 1 cut(s) | 30 |
| CciI | TCATGA | 1 cut(s) | 237 |
| CsiI | ACCWGGT | 1 cut(s) | 175 |
| Csp6I | GTAC | 1 cut(s) | 287 |
| CviAII | CATG | 2 cut(s) | 24, 238 |
| CviJI | RGCY | 3 cut(s) | 10, 32, 302 |
| CviKI_1 | RGCY | 3 cut(s) | 10, 32, 302 |
| CviQI | GTAC | 1 cut(s) | 287 |
| DpnI | GATC | 1 cut(s) | 135 |
| DpnII | GATC | 1 cut(s) | 133 |
| DraIII | CACNNNGTG | 1 cut(s) | 83 |
| Eco57I | CTGAAG | 1 cut(s) | 183 |
| EcoRII | CCWGG | 1 cut(s) | 175 |
| FaeI | CATG | 2 cut(s) | 27, 241 |
| FatI | CATG | 2 cut(s) | 23, 237 |
| FspBI | CTAG | 1 cut(s) | 5 |
| GsuI | CTGGAG | 1 cut(s) | 91 |
| Hin1II | CATG | 2 cut(s) | 27, 241 |
| HindIII | AAGCTT | 1 cut(s) | 300 |
| HinfI | GANTC | 3 cut(s) | 56, 214, 221 |
| HphI | GGTGA | 1 cut(s) | 95 |
| Hpy166II | GTNNAC | 2 cut(s) | 77, 287 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 3 cut(s) | 70, 218, 238 |
| Hpy8I | GTNNAC | 2 cut(s) | 77, 287 |
| HpyAV | CCTTC | 2 cut(s) | 41, 178 |
| HpyCH4V | TGCA | 2 cut(s) | 77, 101 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 98 |
| Hsp92II | CATG | 2 cut(s) | 27, 241 |
| Kzo9I | GATC | 1 cut(s) | 133 |
| LpnPI | CCDG | 3 cut(s) | 55, 162, 189 |
| MabI | ACCWGGT | 1 cut(s) | 175 |
| MaeI | CTAG | 1 cut(s) | 5 |
| MalI | GATC | 1 cut(s) | 135 |
| MboI | GATC | 1 cut(s) | 133 |
| MboII | GAAGA | 1 cut(s) | 176 |
| MfeI | CAATTG | 1 cut(s) | 290 |
| MhlI | GDGCHC | 1 cut(s) | 79 |
| MluCI | AATT | 1 cut(s) | 290 |
| MmeI | TCCRAC | 1 cut(s) | 44 |
| MnlI | CCTC | 5 cut(s) | 36, 98, 182, 204, 273 |
| MseI | TTAA | 2 cut(s) | 152, 316 |
| MslI | CAYNNNNRTG | 1 cut(s) | 38 |
| MspR9I | CCNGG | 1 cut(s) | 177 |
| MunI | CAATTG | 1 cut(s) | 290 |
| MvaI | CCWGG | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 98 |
| NdeII | GATC | 1 cut(s) | 133 |
| NlaIII | CATG | 2 cut(s) | 27, 241 |
| PagI | TCATGA | 1 cut(s) | 237 |
| PfeI | GAWTC | 3 cut(s) | 56, 214, 221 |
| Psp6I | CCWGG | 1 cut(s) | 175 |
| PspGI | CCWGG | 1 cut(s) | 175 |
| RsaI | GTAC | 1 cut(s) | 288 |
| RsaNI | GTAC | 1 cut(s) | 287 |
| RseI | CAYNNNNRTG | 1 cut(s) | 38 |
| SaqAI | TTAA | 2 cut(s) | 152, 316 |
| Sau3AI | GATC | 1 cut(s) | 133 |
| ScrFI | CCNGG | 1 cut(s) | 177 |
| SduI | GDGCHC | 1 cut(s) | 79 |
| SetI | ASST | 3 cut(s) | 12, 178, 304 |
| SexAI | ACCWGGT | 1 cut(s) | 175 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 38 |
| Sse9I | AATT | 1 cut(s) | 290 |
| SspI | AATATT | 1 cut(s) | 234 |
| SspMI | CTAG | 1 cut(s) | 5 |
| StyD4I | CCNGG | 1 cut(s) | 175 |
| TasI | AATT | 1 cut(s) | 290 |
| TatI | WGTACW | 1 cut(s) | 286 |
| TfiI | GAWTC | 3 cut(s) | 56, 214, 221 |
| Tru1I | TTAA | 2 cut(s) | 152, 316 |
| Tru9I | TTAA | 2 cut(s) | 152, 316 |
| TscAI | CASTG | 1 cut(s) | 45 |
| TspDTI | ATGAA | 1 cut(s) | 226 |
| TspRI | CASTG | 1 cut(s) | 45 |
| VneI | GTGCAC | 1 cut(s) | 75 |
| XspI | CTAG | 1 cut(s) | 5 |