No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097701 RchiOBHm_Chr6g0292791 |
| rosa_laevigata | RLG00000015275 RLG00000021547 RLG00000030592 |
| rosa_roxburghii | Rroxscaffold_1G00036680 Rroxscaffold_1G00041910 Rroxscaffold_4G00298950 |
| rosa_samantha | Rh1BG038600 Rh1BG413300 Rh1CG442700 Rh1DG446300 Rh2AG239900 Rh2AG454600 Rh2BG458800 Rh2CG329000 Rh2CG441700 Rh2DG247800 Rh3AG319400 Rh3DG074200 Rh3DG253400 Rh4AG134000 Rh4CG324700 Rh4DG018300 Rh5BG409600 Rh5CG361100 Rh5CG434400 Rh5DG243200 Rh6AG347300 Rh6CG028700 Rh6CG148300 Rh6CG361100 Rh6DG027800 Rh7AG187400 Rh7BG242700 |
| rosa_wichuraiana | Rw0G008450 Rw2G012270 Rw4G030630 Rw5G021380 Rw5G046710 Rw6G001850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 14 |
| AgsI | TTSAA | 1 cut(s) | 155 |
| AluBI | AGCT | 3 cut(s) | 68, 95, 158 |
| AluI | AGCT | 3 cut(s) | 68, 95, 158 |
| AlwI | GGATC | 1 cut(s) | 14 |
| ApeKI | GCWGC | 2 cut(s) | 130, 133 |
| BamHI | GGATCC | 1 cut(s) | 6 |
| BauI | CACGAG | 1 cut(s) | 125 |
| BbvI | GCAGC | 2 cut(s) | 142, 145 |
| BfaI | CTAG | 1 cut(s) | 184 |
| BisI | GCNGC | 2 cut(s) | 131, 134 |
| BlsI | GCNGC | 2 cut(s) | 132, 135 |
| BmiI | GGNNCC | 1 cut(s) | 8 |
| BpuEI | CTTGAG | 1 cut(s) | 81 |
| BseMII | CTCAG | 1 cut(s) | 176 |
| BseRI | GAGGAG | 1 cut(s) | 150 |
| BseXI | GCAGC | 2 cut(s) | 142, 145 |
| Bsp143I | GATC | 1 cut(s) | 6 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BspLI | GGNNCC | 1 cut(s) | 8 |
| BspPI | GGATC | 1 cut(s) | 14 |
| BssMI | GATC | 1 cut(s) | 6 |
| BssSI | CACGAG | 1 cut(s) | 125 |
| Bst2BI | CACGAG | 1 cut(s) | 125 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstKTI | GATC | 1 cut(s) | 9 |
| BstMBI | GATC | 1 cut(s) | 6 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 130 |
| BstV1I | GCAGC | 2 cut(s) | 142, 145 |
| BstX2I | RGATCY | 1 cut(s) | 6 |
| BstYI | RGATCY | 1 cut(s) | 6 |
| CviAII | CATG | 1 cut(s) | 140 |
| CviJI | RGCY | 5 cut(s) | 68, 95, 113, 136, 158 |
| CviKI_1 | RGCY | 5 cut(s) | 68, 95, 113, 136, 158 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 1 cut(s) | 8 |
| DpnII | GATC | 1 cut(s) | 6 |
| FaeI | CATG | 1 cut(s) | 143 |
| FaiI | YATR | 1 cut(s) | 141 |
| FatI | CATG | 1 cut(s) | 139 |
| Fnu4HI | GCNGC | 2 cut(s) | 131, 134 |
| Fsp4HI | GCNGC | 2 cut(s) | 131, 134 |
| FspBI | CTAG | 1 cut(s) | 184 |
| GluI | GCNGC | 2 cut(s) | 131, 134 |
| Hin1II | CATG | 1 cut(s) | 143 |
| HinfI | GANTC | 3 cut(s) | 73, 118, 166 |
| Hpy188I | TCNGA | 1 cut(s) | 165 |
| Hpy188III | TCNNGA | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 1 cut(s) | 52 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 130 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| Hsp92II | CATG | 1 cut(s) | 143 |
| Kzo9I | GATC | 1 cut(s) | 6 |
| LmnI | GCTCC | 2 cut(s) | 65, 163 |
| LpnPI | CCDG | 4 cut(s) | 8, 26, 38, 95 |
| Lsp1109I | GCAGC | 2 cut(s) | 142, 145 |
| MaeI | CTAG | 1 cut(s) | 184 |
| MalI | GATC | 1 cut(s) | 8 |
| MboI | GATC | 1 cut(s) | 6 |
| MflI | RGATCY | 1 cut(s) | 6 |
| MnlI | CCTC | 3 cut(s) | 19, 100, 171 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 130 |
| NdeII | GATC | 1 cut(s) | 6 |
| NlaIII | CATG | 1 cut(s) | 143 |
| NlaIV | GGNNCC | 1 cut(s) | 8 |
| PfeI | GAWTC | 3 cut(s) | 73, 118, 166 |
| PkrI | GCNGC | 2 cut(s) | 132, 135 |
| PspN4I | GGNNCC | 1 cut(s) | 8 |
| PsuI | RGATCY | 1 cut(s) | 6 |
| SatI | GCNGC | 2 cut(s) | 131, 134 |
| Sau3AI | GATC | 1 cut(s) | 6 |
| SetI | ASST | 4 cut(s) | 15, 70, 97, 160 |
| SgeI | CNNG | 9 cut(s) | 25, 35, 65, 94, 104, 110, 137, 139, 152 |
| SmlI | CTYRAG | 1 cut(s) | 96 |
| SmoI | CTYRAG | 1 cut(s) | 96 |
| SspMI | CTAG | 1 cut(s) | 184 |
| TfiI | GAWTC | 3 cut(s) | 73, 118, 166 |
| TseI | GCWGC | 2 cut(s) | 130, 133 |
| XspI | CTAG | 1 cut(s) | 184 |