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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097701 RchiOBHm_Chr6g0292791 |
| rosa_laevigata | RLG00000015275 RLG00000021547 RLG00000030592 |
| rosa_roxburghii | Rroxscaffold_1G00036680 Rroxscaffold_1G00041910 Rroxscaffold_4G00298950 |
| rosa_samantha | Rh1BG038600 Rh1BG413300 Rh1CG442700 Rh1DG446300 Rh2AG239900 Rh2AG454600 Rh2BG458800 Rh2CG329000 Rh2CG441700 Rh2DG247800 Rh3AG319400 Rh3DG074200 Rh3DG253400 Rh4AG134000 Rh4CG324700 Rh4DG018300 Rh5BG409600 Rh5CG361100 Rh5CG434400 Rh5DG243200 Rh6AG347300 Rh6CG028700 Rh6CG148300 Rh6CG361100 Rh6DG027800 Rh7AG187400 Rh7BG242700 |
| rosa_wichuraiana | Rw0G008450 Rw2G012270 Rw4G030630 Rw5G021380 Rw5G046710 Rw6G001850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 166 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 30, 104 |
| AccII | CGCG | 1 cut(s) | 63 |
| AclWI | GGATC | 1 cut(s) | 362 |
| AcoI | YGGCCR | 1 cut(s) | 21 |
| AcsI | RAATTY | 1 cut(s) | 208 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 30, 104, 380 |
| AflIII | ACRYGT | 1 cut(s) | 61 |
| AgsI | TTSAA | 4 cut(s) | 146, 270, 337, 417 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 302, 334 |
| AlwI | GGATC | 1 cut(s) | 362 |
| AoxI | GGCC | 2 cut(s) | 21, 422 |
| ApeKI | GCWGC | 1 cut(s) | 118 |
| ApoI | RAATTY | 1 cut(s) | 208 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 141 |
| AspLEI | GCGC | 1 cut(s) | 36 |
| AspS9I | GGNCC | 1 cut(s) | 423 |
| AsuHPI | GGTGA | 2 cut(s) | 65, 333 |
| BaeGI | GKGCMC | 1 cut(s) | 171 |
| BalI | TGGCCA | 1 cut(s) | 23 |
| BanI | GGYRCC | 1 cut(s) | 166 |
| BbvI | GCAGC | 1 cut(s) | 130 |
| BccI | CCATC | 3 cut(s) | 44, 71, 98 |
| BfaI | CTAG | 1 cut(s) | 362 |
| BfmI | CTRYAG | 1 cut(s) | 375 |
| BfoI | RGCGCY | 1 cut(s) | 37 |
| BisI | GCNGC | 1 cut(s) | 119 |
| BlsI | GCNGC | 1 cut(s) | 120 |
| BmgT120I | GGNCC | 1 cut(s) | 423 |
| BmiI | GGNNCC | 2 cut(s) | 168, 304 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 30, 104, 380 |
| BseGI | GGATG | 3 cut(s) | 55, 244, 292 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 30, 104, 380 |
| BseMII | CTCAG | 1 cut(s) | 336 |
| BseRI | GAGGAG | 1 cut(s) | 343 |
| BseSI | GKGCMC | 1 cut(s) | 171 |
| BseXI | GCAGC | 1 cut(s) | 130 |
| BsgI | GTGCAG | 1 cut(s) | 137 |
| Bsh1236I | CGCG | 1 cut(s) | 63 |
| BshFI | GGCC | 2 cut(s) | 23, 424 |
| BshNI | GGYRCC | 1 cut(s) | 166 |
| BslFI | GGGAC | 2 cut(s) | 134, 421 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 30, 104, 380 |
| BsmFI | GGGAC | 2 cut(s) | 134, 421 |
| BsmI | GAATGC | 1 cut(s) | 258 |
| BsnI | GGCC | 2 cut(s) | 23, 424 |
| Bsp1286I | GDGCHC | 1 cut(s) | 171 |
| Bsp143I | GATC | 1 cut(s) | 354 |
| BspANI | GGCC | 2 cut(s) | 23, 424 |
| BspCNI | CTCAG | 1 cut(s) | 335 |
| BspFNI | CGCG | 1 cut(s) | 63 |
| BspLI | GGNNCC | 2 cut(s) | 168, 304 |
| BspMAI | CTGCAG | 1 cut(s) | 379 |
| BspPI | GGATC | 1 cut(s) | 362 |
| BspT107I | GGYRCC | 1 cut(s) | 166 |
| BssMI | GATC | 1 cut(s) | 354 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstC8I | GCNNGC | 1 cut(s) | 375 |
| BstDEI | CTNAG | 1 cut(s) | 322 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 378 |
| BstF5I | GGATG | 3 cut(s) | 55, 244, 292 |
| BstFNI | CGCG | 1 cut(s) | 63 |
| BstH2I | RGCGCY | 1 cut(s) | 37 |
| BstHHI | GCGC | 1 cut(s) | 36 |
| BstKTI | GATC | 1 cut(s) | 357 |
| BstMBI | GATC | 1 cut(s) | 354 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 124 |
| BstSFI | CTRYAG | 1 cut(s) | 375 |
| BstSLI | GKGCMC | 1 cut(s) | 171 |
| BstUI | CGCG | 1 cut(s) | 63 |
| BstV1I | GCAGC | 1 cut(s) | 130 |
| BsuRI | GGCC | 2 cut(s) | 23, 424 |
| BtsCI | GGATG | 3 cut(s) | 55, 244, 292 |
| Cac8I | GCNNGC | 1 cut(s) | 375 |
| CfoI | GCGC | 1 cut(s) | 36 |
| Cfr13I | GGNCC | 1 cut(s) | 423 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 216, 251 |
| CviAII | CATG | 2 cut(s) | 134, 429 |
| CviJI | RGCY | 5 cut(s) | 23, 58, 127, 373, 424 |
| CviKI_1 | RGCY | 5 cut(s) | 23, 58, 127, 373, 424 |
| DdeI | CTNAG | 1 cut(s) | 322 |
| DpnI | GATC | 1 cut(s) | 356 |
| DpnII | GATC | 1 cut(s) | 354 |
| EaeI | YGGCCR | 1 cut(s) | 21 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 378 |
| EcoO109I | RGGNCCY | 1 cut(s) | 423 |
| FaeI | CATG | 2 cut(s) | 137, 432 |
| FaiI | YATR | 5 cut(s) | 20, 67, 69, 135, 430 |
| FaqI | GGGAC | 2 cut(s) | 134, 421 |
| FatI | CATG | 2 cut(s) | 133, 428 |
| Fnu4HI | GCNGC | 1 cut(s) | 119 |
| FokI | GGATG | 3 cut(s) | 62, 251, 279 |
| Fsp4HI | GCNGC | 1 cut(s) | 119 |
| FspBI | CTAG | 1 cut(s) | 362 |
| GlaI | GCGC | 1 cut(s) | 35 |
| GluI | GCNGC | 1 cut(s) | 119 |
| HaeII | RGCGCY | 1 cut(s) | 37 |
| HaeIII | GGCC | 2 cut(s) | 23, 424 |
| HhaI | GCGC | 1 cut(s) | 36 |
| Hin1II | CATG | 2 cut(s) | 137, 432 |
| Hin6I | GCGC | 1 cut(s) | 34 |
| HinP1I | GCGC | 1 cut(s) | 34 |
| HincII | GTYRAC | 1 cut(s) | 15 |
| HindII | GTYRAC | 1 cut(s) | 15 |
| HinfI | GANTC | 3 cut(s) | 8, 333, 413 |
| HphI | GGTGA | 2 cut(s) | 65, 333 |
| Hpy166II | GTNNAC | 1 cut(s) | 15 |
| Hpy188I | TCNGA | 2 cut(s) | 205, 219 |
| Hpy188III | TCNNGA | 1 cut(s) | 47 |
| Hpy8I | GTNNAC | 1 cut(s) | 15 |
| HpyAV | CCTTC | 2 cut(s) | 345, 374 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 6 cut(s) | 83, 110, 118, 161, 256, 377 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 124 |
| HpyF3I | CTNAG | 1 cut(s) | 322 |
| Hsp92II | CATG | 2 cut(s) | 137, 432 |
| HspAI | GCGC | 1 cut(s) | 34 |
| Kzo9I | GATC | 1 cut(s) | 354 |
| LpnPI | CCDG | 8 cut(s) | 32, 111, 141, 165, 309, 327, 387, 390 |
| Lsp1109I | GCAGC | 1 cut(s) | 130 |
| MaeI | CTAG | 1 cut(s) | 362 |
| MaeIII | GTNAC | 2 cut(s) | 223, 339 |
| MalI | GATC | 1 cut(s) | 356 |
| MboI | GATC | 1 cut(s) | 354 |
| MboII | GAAGA | 2 cut(s) | 86, 113 |
| MfeI | CAATTG | 1 cut(s) | 228 |
| MhlI | GDGCHC | 1 cut(s) | 171 |
| MlsI | TGGCCA | 1 cut(s) | 23 |
| MluCI | AATT | 3 cut(s) | 25, 208, 228 |
| MluI | ACGCGT | 1 cut(s) | 61 |
| MluNI | TGGCCA | 1 cut(s) | 23 |
| MnlI | CCTC | 4 cut(s) | 157, 316, 321, 436 |
| Mox20I | TGGCCA | 1 cut(s) | 23 |
| MroXI | GAANNNNTTC | 1 cut(s) | 141 |
| MscI | TGGCCA | 1 cut(s) | 23 |
| MseI | TTAA | 1 cut(s) | 212 |
| MslI | CAYNNNNRTG | 2 cut(s) | 138, 251 |
| Msp20I | TGGCCA | 1 cut(s) | 23 |
| MunI | CAATTG | 1 cut(s) | 228 |
| Mva1269I | GAATGC | 1 cut(s) | 258 |
| MvnI | CGCG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 124 |
| NdeII | GATC | 1 cut(s) | 354 |
| NlaIII | CATG | 2 cut(s) | 137, 432 |
| NlaIV | GGNNCC | 2 cut(s) | 168, 304 |
| NmuCI | GTSAC | 2 cut(s) | 223, 339 |
| PctI | GAATGC | 1 cut(s) | 258 |
| PdmI | GAANNNNTTC | 1 cut(s) | 141 |
| PfeI | GAWTC | 3 cut(s) | 8, 333, 413 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 30, 104 |
| PkrI | GCNGC | 1 cut(s) | 120 |
| PspN4I | GGNNCC | 2 cut(s) | 168, 304 |
| PspPI | GGNCC | 1 cut(s) | 423 |
| PstI | CTGCAG | 1 cut(s) | 379 |
| RseI | CAYNNNNRTG | 2 cut(s) | 138, 251 |
| SaqAI | TTAA | 1 cut(s) | 212 |
| SatI | GCNGC | 1 cut(s) | 119 |
| Sau3AI | GATC | 1 cut(s) | 354 |
| Sau96I | GGNCC | 1 cut(s) | 423 |
| SduI | GDGCHC | 1 cut(s) | 171 |
| SetI | ASST | 3 cut(s) | 168, 304, 385 |
| SfcI | CTRYAG | 1 cut(s) | 375 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 138, 251 |
| Sse9I | AATT | 3 cut(s) | 25, 208, 228 |
| SspMI | CTAG | 1 cut(s) | 362 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TasI | AATT | 3 cut(s) | 25, 208, 228 |
| TfiI | GAWTC | 3 cut(s) | 8, 333, 413 |
| Tru1I | TTAA | 1 cut(s) | 212 |
| Tru9I | TTAA | 1 cut(s) | 212 |
| TseFI | GTSAC | 2 cut(s) | 223, 339 |
| TseI | GCWGC | 1 cut(s) | 118 |
| Tsp45I | GTSAC | 2 cut(s) | 223, 339 |
| TspDTI | ATGAA | 3 cut(s) | 150, 170, 272 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 30, 104 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 378 |
| XapI | RAATTY | 1 cut(s) | 208 |
| XmnI | GAANNNNTTC | 1 cut(s) | 141 |
| XspI | CTAG | 1 cut(s) | 362 |