Villin headpiece domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097701 RchiOBHm_Chr6g0292791 |
| rosa_laevigata | RLG00000015275 RLG00000021547 RLG00000030592 |
| rosa_roxburghii | Rroxscaffold_1G00036680 Rroxscaffold_1G00041910 Rroxscaffold_4G00298950 |
| rosa_samantha | Rh1BG038600 Rh1BG413300 Rh1CG442700 Rh1DG446300 Rh2AG239900 Rh2AG454600 Rh2BG458800 Rh2CG329000 Rh2CG441700 Rh2DG247800 Rh3AG319400 Rh3DG074200 Rh3DG253400 Rh4AG134000 Rh4CG324700 Rh4DG018300 Rh5BG409600 Rh5CG361100 Rh5CG434400 Rh5DG243200 Rh6AG347300 Rh6CG028700 Rh6CG148300 Rh6CG361100 Rh6DG027800 Rh7AG187400 Rh7BG242700 |
| rosa_wichuraiana | Rw0G008450 Rw2G012270 Rw4G030630 Rw5G021380 Rw5G046710 Rw6G001850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 156 |
| AccI | GTMKAC | 1 cut(s) | 275 |
| AccII | CGCG | 1 cut(s) | 397 |
| AciI | CCGC | 5 cut(s) | 156, 289, 307, 314, 397 |
| AclWI | GGATC | 3 cut(s) | 128, 339, 391 |
| AcuI | CTGAAG | 1 cut(s) | 183 |
| AdeI | CACNNNGTG | 1 cut(s) | 83 |
| AgsI | TTSAA | 1 cut(s) | 184 |
| AjnI | CCWGG | 1 cut(s) | 175 |
| AluBI | AGCT | 3 cut(s) | 10, 294, 361 |
| AluI | AGCT | 3 cut(s) | 10, 294, 361 |
| Alw21I | GWGCWC | 1 cut(s) | 79 |
| Alw44I | GTGCAC | 1 cut(s) | 75 |
| AlwI | GGATC | 3 cut(s) | 128, 339, 391 |
| ApaLI | GTGCAC | 1 cut(s) | 75 |
| AspLEI | GCGC | 1 cut(s) | 397 |
| AsuHPI | GGTGA | 1 cut(s) | 95 |
| BaeGI | GKGCMC | 1 cut(s) | 79 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 156, 188 |
| Bbv12I | GWGCWC | 1 cut(s) | 79 |
| BccI | CCATC | 1 cut(s) | 374 |
| BceAI | ACGGC | 1 cut(s) | 294 |
| BciT130I | CCWGG | 1 cut(s) | 177 |
| BciVI | GTATCC | 1 cut(s) | 116 |
| BfuI | GTATCC | 1 cut(s) | 116 |
| Bme1390I | CCNGG | 1 cut(s) | 177 |
| BmrFI | CCNGG | 1 cut(s) | 177 |
| BpmI | CTGGAG | 3 cut(s) | 26, 91, 383 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 330, 360 |
| BseBI | CCWGG | 1 cut(s) | 177 |
| BseSI | GKGCMC | 1 cut(s) | 79 |
| Bsh1236I | CGCG | 1 cut(s) | 397 |
| BsiHKAI | GWGCWC | 1 cut(s) | 79 |
| Bsp1286I | GDGCHC | 1 cut(s) | 79 |
| Bsp143I | GATC | 3 cut(s) | 133, 331, 383 |
| BspACI | CCGC | 5 cut(s) | 156, 289, 307, 314, 397 |
| BspFNI | CGCG | 1 cut(s) | 397 |
| BspHI | TCATGA | 1 cut(s) | 237 |
| BspPI | GGATC | 3 cut(s) | 128, 339, 391 |
| BsrBI | CCGCTC | 1 cut(s) | 156 |
| BssMI | GATC | 3 cut(s) | 133, 331, 383 |
| Bst2UI | CCWGG | 1 cut(s) | 177 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 2 cut(s) | 30, 421 |
| BstFNI | CGCG | 1 cut(s) | 397 |
| BstHHI | GCGC | 1 cut(s) | 397 |
| BstKTI | GATC | 3 cut(s) | 136, 334, 386 |
| BstMBI | GATC | 3 cut(s) | 133, 331, 383 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 98 |
| BstNI | CCWGG | 1 cut(s) | 177 |
| BstSCI | CCNGG | 1 cut(s) | 175 |
| BstSLI | GKGCMC | 1 cut(s) | 79 |
| BstUI | CGCG | 1 cut(s) | 397 |
| BstX2I | RGATCY | 1 cut(s) | 331 |
| BstYI | RGATCY | 1 cut(s) | 331 |
| BsuI | GTATCC | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 45 |
| Cac8I | GCNNGC | 2 cut(s) | 30, 421 |
| CciI | TCATGA | 1 cut(s) | 237 |
| CfoI | GCGC | 1 cut(s) | 397 |
| CsiI | ACCWGGT | 1 cut(s) | 175 |
| CviAII | CATG | 2 cut(s) | 24, 238 |
| CviJI | RGCY | 4 cut(s) | 10, 32, 294, 361 |
| CviKI_1 | RGCY | 4 cut(s) | 10, 32, 294, 361 |
| DpnI | GATC | 3 cut(s) | 135, 333, 385 |
| DpnII | GATC | 3 cut(s) | 133, 331, 383 |
| DraIII | CACNNNGTG | 1 cut(s) | 83 |
| EciI | GGCGGA | 2 cut(s) | 304, 322 |
| Eco57I | CTGAAG | 1 cut(s) | 183 |
| EcoRII | CCWGG | 1 cut(s) | 175 |
| FaeI | CATG | 2 cut(s) | 27, 241 |
| FaiI | YATR | 6 cut(s) | 25, 35, 128, 149, 170, 239 |
| FatI | CATG | 2 cut(s) | 23, 237 |
| FauI | CCCGC | 1 cut(s) | 307 |
| FblI | GTMKAC | 1 cut(s) | 275 |
| GlaI | GCGC | 1 cut(s) | 396 |
| GsuI | CTGGAG | 3 cut(s) | 26, 91, 383 |
| HhaI | GCGC | 1 cut(s) | 397 |
| Hin1II | CATG | 2 cut(s) | 27, 241 |
| Hin6I | GCGC | 1 cut(s) | 395 |
| HinP1I | GCGC | 1 cut(s) | 395 |
| HincII | GTYRAC | 2 cut(s) | 276, 402 |
| HindII | GTYRAC | 2 cut(s) | 276, 402 |
| HinfI | GANTC | 3 cut(s) | 56, 214, 221 |
| HphI | GGTGA | 1 cut(s) | 95 |
| Hpy166II | GTNNAC | 3 cut(s) | 77, 276, 402 |
| Hpy188I | TCNGA | 3 cut(s) | 61, 338, 388 |
| Hpy188III | TCNNGA | 3 cut(s) | 70, 218, 238 |
| Hpy8I | GTNNAC | 3 cut(s) | 77, 276, 402 |
| Hpy99I | CGWCG | 1 cut(s) | 280 |
| HpyAV | CCTTC | 3 cut(s) | 41, 178, 182 |
| HpyCH4V | TGCA | 3 cut(s) | 77, 92, 101 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 98 |
| Hsp92II | CATG | 2 cut(s) | 27, 241 |
| HspAI | GCGC | 1 cut(s) | 395 |
| Kzo9I | GATC | 3 cut(s) | 133, 331, 383 |
| LmnI | GCTCC | 2 cut(s) | 7, 291 |
| LpnPI | CCDG | 6 cut(s) | 55, 162, 189, 231, 347, 394 |
| MabI | ACCWGGT | 1 cut(s) | 175 |
| MalI | GATC | 3 cut(s) | 135, 333, 385 |
| MbiI | CCGCTC | 1 cut(s) | 156 |
| MboI | GATC | 3 cut(s) | 133, 331, 383 |
| MboII | GAAGA | 1 cut(s) | 176 |
| MflI | RGATCY | 1 cut(s) | 331 |
| MhlI | GDGCHC | 1 cut(s) | 79 |
| MmeI | TCCRAC | 2 cut(s) | 44, 334 |
| MslI | CAYNNNNRTG | 1 cut(s) | 38 |
| MspR9I | CCNGG | 1 cut(s) | 177 |
| MvaI | CCWGG | 1 cut(s) | 177 |
| MvnI | CGCG | 1 cut(s) | 397 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 98 |
| NdeII | GATC | 3 cut(s) | 133, 331, 383 |
| NlaIII | CATG | 2 cut(s) | 27, 241 |
| PagI | TCATGA | 1 cut(s) | 237 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 342 |
| PfeI | GAWTC | 3 cut(s) | 56, 214, 221 |
| Psp6I | CCWGG | 1 cut(s) | 175 |
| PspGI | CCWGG | 1 cut(s) | 175 |
| PsuI | RGATCY | 1 cut(s) | 331 |
| RseI | CAYNNNNRTG | 1 cut(s) | 38 |
| SalI | GTCGAC | 1 cut(s) | 274 |
| Sau3AI | GATC | 3 cut(s) | 133, 331, 383 |
| ScrFI | CCNGG | 1 cut(s) | 177 |
| SduI | GDGCHC | 1 cut(s) | 79 |
| SetI | ASST | 8 cut(s) | 12, 178, 287, 296, 343, 354, 363, 393 |
| SexAI | ACCWGGT | 1 cut(s) | 175 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 38 |
| SsiI | CCGC | 5 cut(s) | 156, 289, 307, 314, 397 |
| SspI | AATATT | 1 cut(s) | 234 |
| StyD4I | CCNGG | 1 cut(s) | 175 |
| TaqI | TCGA | 1 cut(s) | 275 |
| TaqII | GACCGA | 1 cut(s) | 257 |
| TfiI | GAWTC | 3 cut(s) | 56, 214, 221 |
| TscAI | CASTG | 1 cut(s) | 45 |
| TspDTI | ATGAA | 1 cut(s) | 226 |
| TspRI | CASTG | 1 cut(s) | 45 |
| VneI | GTGCAC | 1 cut(s) | 75 |
| XmiI | GTMKAC | 1 cut(s) | 275 |