RH3CG273000
NAC Family

NAC domain-containing protein 67-like

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0002868
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG273000.1

Sequence Viewer

Length: 942 bp
ATGGATCACTTGTTTCTTTCAATGGAGTCAAACTACCAAAAAAACCCTATGTTCATTGAAGATCCAGTTGACGTTTATTTGAATTCTCTTCCGCCCGGTTATCGATTTGCCCCTACCGATGCAGAGCTGATTCTATATTACTTGCAGAAAAAGATTTTGAAGCAGGAACTACCCCTTAACAAGATTCGTGAAATCGATATTTATCAACACGATCCTCAGTACCTTGCTGAGACGCAGTTGAACAGACATGGAGAAAGAGAATGGTACTTTTTCACTCCCAGGGAGCGAAAGTACCCCCATGGTTCACGGCCAAATCGAACAGCACACGATGGATTCTGGAAGGTAACTGGAAAAGATGAAGTCATTACATCAGCTACAGGTGAAATAATTGGATACAAAAATACTCTTGATTACTTTGAAGGGACACATTCGGAAAACCAAAAGACCAAATGGAAAATGCATGAATATAGACTAAAGAAATCAGAGAGAGATGAAGATATTGCTGCTTCAAATAATGAAAAATGTCAACGTGATATGAAGTTGGATGATTGTGTTTTGTGTAAGATTTACACAAGTAACAGATGCAAGGCCGGGAAAAGCACCAAGAAAATTAGCAACAGTGCAAAGAAATCATTCAATTCTGTCCAAGATAGAGATGTTCAGCATGAAAATCAGGATCAACCAACTTTTGGTGGTGATTACAATTCCAATTCTCCCGCTGCATTTAACAATGGTTATGGTTCGACGAACAAATTTTGTGACCCTGCAAATCTTCCTCTGCAAGATCAAGCTTATGGCATCGCCCATCCTTCAGGACACATCAATAACTTCAATAATCAAAACAATACACATTACAACATGCACTCAAGTTCTTTGGAAGATCATGTCAGAGATTTTGAGCGTTGGTTAATTACAGCCGTGCACGAAGAAGGCAAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

313

Amino Acids

36.46

Weight (kDa)

6.54

Isoelectric Point (pI)

33.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 31 - 158 1.1e-40 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 689
AciI CCGC 2 cut(s) 92, 717
AclWI GGATC 4 cut(s) 12, 56, 206, 684
AcoI YGGCCR 1 cut(s) 308
AcsI RAATTY 2 cut(s) 82, 752
AcuI CTGAAG 1 cut(s) 795
AfaI GTAC 3 cut(s) 221, 266, 293
AfiI CCNNNNNNNGG 1 cut(s) 689
AgsI TTSAA 9 cut(s) 21, 59, 82, 160, 241, 419, 510, 637, 832
AjnI CCWGG 1 cut(s) 278
AluBI AGCT 3 cut(s) 127, 374, 791
AluI AGCT 3 cut(s) 127, 374, 791
Alw21I GWGCWC 1 cut(s) 924
Alw26I GTCTC 1 cut(s) 224
Alw44I GTGCAC 1 cut(s) 920
AlwI GGATC 4 cut(s) 12, 56, 206, 684
AoxI GGCC 2 cut(s) 308, 588
ApaLI GTGCAC 1 cut(s) 920
ApeKI GCWGC 2 cut(s) 503, 719
ApoI RAATTY 2 cut(s) 82, 752
Asp700I GAANNNNTTC 1 cut(s) 632
AsuC2I CCSGG 2 cut(s) 96, 592
AsuHPI GGTGA 2 cut(s) 392, 707
BaeGI GKGCMC 1 cut(s) 924
Bbv12I GWGCWC 1 cut(s) 924
BbvI GCAGC 2 cut(s) 490, 706
BccI CCATC 2 cut(s) 323, 813
BceAI ACGGC 2 cut(s) 323, 902
BciT130I CCWGG 1 cut(s) 280
BciVI GTATCC 1 cut(s) 386
BcnI CCSGG 2 cut(s) 96, 592
BcoDI GTCTC 1 cut(s) 224
BfmI CTRYAG 1 cut(s) 375
BfuI GTATCC 1 cut(s) 386
BisI GCNGC 2 cut(s) 504, 720
BlsI GCNGC 2 cut(s) 505, 721
Bme1390I CCNGG 3 cut(s) 96, 280, 592
BmrFI CCNGG 3 cut(s) 96, 280, 592
BmsI GCATC 3 cut(s) 109, 572, 807
BpuEI CTTGAG 1 cut(s) 850
BpuMI CCSGG 2 cut(s) 96, 592
Bsa29I ATCGAT 2 cut(s) 103, 195
BsaBI GATNNNNATC 1 cut(s) 201
BsaJI CCNNGG 3 cut(s) 278, 279, 298
BsaXI ACNNNNNCTCC 2 cut(s) 275, 305
Bsc4I CCNNNNNNNGG 1 cut(s) 689
Bse1I ACTGG 2 cut(s) 65, 352
Bse8I GATNNNNATC 1 cut(s) 201
BseBI CCWGG 1 cut(s) 280
BseCI ATCGAT 2 cut(s) 103, 195
BseDI CCNNGG 3 cut(s) 278, 279, 298
BseGI GGATG 2 cut(s) 550, 805
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 1 cut(s) 689
BseMII CTCAG 2 cut(s) 219, 230
BseNI ACTGG 2 cut(s) 65, 352
BseSI GKGCMC 1 cut(s) 924
BseXI GCAGC 2 cut(s) 490, 706
BshFI GGCC 2 cut(s) 310, 590
BshVI ATCGAT 2 cut(s) 103, 195
BsiHKAI GWGCWC 1 cut(s) 924
BsiSI CCGG 2 cut(s) 96, 591
BslFI GGGAC 1 cut(s) 436
BslI CCNNNNNNNGG 1 cut(s) 689
BsmAI GTCTC 1 cut(s) 224
BsmBI CGTCTC 1 cut(s) 224
BsmFI GGGAC 1 cut(s) 436
BsnI GGCC 2 cut(s) 310, 590
Bsp1286I GDGCHC 1 cut(s) 924
Bsp143I GATC 6 cut(s) 4, 61, 211, 676, 784, 880
Bsp19I CCATGG 1 cut(s) 298
BspACI CCGC 2 cut(s) 92, 717
BspANI GGCC 2 cut(s) 310, 590
BspCNI CTCAG 2 cut(s) 220, 229
BspDI ATCGAT 2 cut(s) 103, 195
BspPI GGATC 4 cut(s) 12, 56, 206, 684
BsrI ACTGG 2 cut(s) 65, 352
BssECI CCNNGG 3 cut(s) 278, 279, 298
BssMI GATC 6 cut(s) 4, 61, 211, 676, 784, 880
BssT1I CCWWGG 1 cut(s) 298
Bst2UI CCWGG 1 cut(s) 280
Bst4CI ACNGT 1 cut(s) 620
Bst6I CTCTTC 1 cut(s) 93
BstDEI CTNAG 2 cut(s) 216, 228
BstDSI CCRYGG 1 cut(s) 298
BstF5I GGATG 2 cut(s) 550, 805
BstKTI GATC 6 cut(s) 7, 64, 214, 679, 787, 883
BstMAI GTCTC 1 cut(s) 224
BstMBI GATC 6 cut(s) 4, 61, 211, 676, 784, 880
BstNI CCWGG 1 cut(s) 280
BstNSI RCATGY 1 cut(s) 862
BstSCI CCNGG 3 cut(s) 94, 278, 590
BstSFI CTRYAG 1 cut(s) 375
BstSLI GKGCMC 1 cut(s) 924
BstV1I GCAGC 2 cut(s) 490, 706
BstX2I RGATCY 1 cut(s) 61
BstYI RGATCY 1 cut(s) 61
Bsu15I ATCGAT 2 cut(s) 103, 195
BsuI GTATCC 1 cut(s) 386
BsuRI GGCC 2 cut(s) 310, 590
BsuTUI ATCGAT 2 cut(s) 103, 195
BtgI CCRYGG 1 cut(s) 298
BtgZI GCGATG 1 cut(s) 784
BtsCI GGATG 2 cut(s) 550, 805
BtsIMutI CAGTG 1 cut(s) 625
ClaI ATCGAT 2 cut(s) 103, 195
CseI GACGC 1 cut(s) 241
Csp6I GTAC 3 cut(s) 220, 265, 292
CviAII CATG 6 cut(s) 248, 299, 461, 665, 859, 884
CviJI RGCY 6 cut(s) 127, 310, 374, 590, 791, 917
CviKI_1 RGCY 6 cut(s) 127, 310, 374, 590, 791, 917
CviQI GTAC 3 cut(s) 220, 265, 292
DdeI CTNAG 2 cut(s) 216, 228
DpnI GATC 6 cut(s) 6, 63, 213, 678, 786, 882
DpnII GATC 6 cut(s) 4, 61, 211, 676, 784, 880
EaeI YGGCCR 1 cut(s) 308
Eam1104I CTCTTC 1 cut(s) 93
EarI CTCTTC 1 cut(s) 93
EciI GGCGGA 1 cut(s) 81
Eco130I CCWWGG 1 cut(s) 298
Eco57I CTGAAG 1 cut(s) 795
EcoRI GAATTC 1 cut(s) 82
EcoRII CCWGG 1 cut(s) 278
EcoT14I CCWWGG 1 cut(s) 298
EcoT22I ATGCAT 1 cut(s) 462
ErhI CCWWGG 1 cut(s) 298
Esp3I CGTCTC 1 cut(s) 224
FaeI CATG 6 cut(s) 251, 302, 464, 668, 862, 887
FaqI GGGAC 1 cut(s) 436
FatI CATG 6 cut(s) 247, 298, 460, 664, 858, 883
FauI CCCGC 1 cut(s) 724
Fnu4HI GCNGC 2 cut(s) 504, 720
FokI GGATG 2 cut(s) 557, 792
Fsp4HI GCNGC 2 cut(s) 504, 720
GluI GCNGC 2 cut(s) 504, 720
HaeIII GGCC 2 cut(s) 310, 590
HapII CCGG 2 cut(s) 96, 591
HgaI GACGC 1 cut(s) 241
Hin1II CATG 6 cut(s) 251, 302, 464, 668, 862, 887
HincII GTYRAC 2 cut(s) 70, 527
HindII GTYRAC 2 cut(s) 70, 527
HindIII AAGCTT 1 cut(s) 789
HinfI GANTC 4 cut(s) 26, 130, 184, 333
HpaII CCGG 2 cut(s) 96, 591
HphI GGTGA 2 cut(s) 392, 707
Hpy166II GTNNAC 4 cut(s) 70, 305, 527, 922
Hpy188I TCNGA 3 cut(s) 433, 484, 890
Hpy188III TCNNGA 5 cut(s) 188, 337, 407, 674, 813
Hpy8I GTNNAC 4 cut(s) 70, 305, 527, 922
Hpy99I CGWCG 1 cut(s) 748
HpyAV CCTTC 4 cut(s) 334, 413, 819, 923
HpyCH4III ACNGT 1 cut(s) 620
HpyCH4IV ACGT 2 cut(s) 72, 529
HpyF3I CTNAG 2 cut(s) 216, 228
HpySE526I ACGT 2 cut(s) 72, 529
Hsp92II CATG 6 cut(s) 251, 302, 464, 668, 862, 887
Kzo9I GATC 6 cut(s) 4, 61, 211, 676, 784, 880
LmnI GCTCC 1 cut(s) 283
Lsp1109I GCAGC 2 cut(s) 490, 706
LweI GCATC 3 cut(s) 109, 572, 807
MaeII ACGT 2 cut(s) 72, 529
MaeIII GTNAC 3 cut(s) 343, 575, 758
MalI GATC 6 cut(s) 6, 63, 213, 678, 786, 882
MboI GATC 6 cut(s) 4, 61, 211, 676, 784, 880
MboII GAAGA 6 cut(s) 71, 80, 506, 764, 890, 938
MflI RGATCY 1 cut(s) 61
MhlI GDGCHC 1 cut(s) 924
MluCI AATT 8 cut(s) 82, 387, 609, 637, 703, 709, 752, 909
MlyI GAGTC 1 cut(s) 35
MmeI TCCRAC 1 cut(s) 522
MnlI CCTC 2 cut(s) 225, 786
Mph1103I ATGCAT 1 cut(s) 462
MroXI GAANNNNTTC 1 cut(s) 632
MseI TTAA 3 cut(s) 177, 726, 908
MspA1I CMGCKG 1 cut(s) 719
MspI CCGG 2 cut(s) 96, 591
MspR9I CCNGG 3 cut(s) 96, 280, 592
MvaI CCWGG 1 cut(s) 280
NciI CCSGG 2 cut(s) 96, 592
NcoI CCATGG 1 cut(s) 298
NdeII GATC 6 cut(s) 4, 61, 211, 676, 784, 880
NlaIII CATG 6 cut(s) 251, 302, 464, 668, 862, 887
NmuCI GTSAC 1 cut(s) 758
NsiI ATGCAT 1 cut(s) 462
NspI RCATGY 1 cut(s) 862
PasI CCCWGGG 1 cut(s) 279
PcsI WCGNNNNNNNCGW 1 cut(s) 313
PdmI GAANNNNTTC 1 cut(s) 632
PfeI GAWTC 3 cut(s) 130, 184, 333
PflMI CCANNNNNTGG 1 cut(s) 689
PkrI GCNGC 2 cut(s) 505, 721
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
Psp6I CCWGG 1 cut(s) 278
PspGI CCWGG 1 cut(s) 278
PsuI RGATCY 1 cut(s) 61
RsaI GTAC 3 cut(s) 221, 266, 293
RsaNI GTAC 3 cut(s) 220, 265, 292
SaqAI TTAA 3 cut(s) 177, 726, 908
SatI GCNGC 2 cut(s) 504, 720
Sau3AI GATC 6 cut(s) 4, 61, 211, 676, 784, 880
SchI GAGTC 1 cut(s) 35
ScrFI CCNGG 3 cut(s) 96, 280, 592
SduI GDGCHC 1 cut(s) 924
SetI ASST 8 cut(s) 75, 129, 225, 345, 376, 382, 532, 793
SfaNI GCATC 3 cut(s) 109, 572, 807
SfcI CTRYAG 1 cut(s) 375
SmlI CTYRAG 1 cut(s) 865
SmoI CTYRAG 1 cut(s) 865
Sse9I AATT 8 cut(s) 82, 387, 609, 637, 703, 709, 752, 909
SsiI CCGC 2 cut(s) 92, 717
StyD4I CCNGG 3 cut(s) 94, 278, 590
StyI CCWWGG 1 cut(s) 298
TaaI ACNGT 1 cut(s) 620
TaiI ACGT 2 cut(s) 75, 532
TaqI TCGA 4 cut(s) 103, 195, 316, 743
TasI AATT 8 cut(s) 82, 387, 609, 637, 703, 709, 752, 909
TfiI GAWTC 3 cut(s) 130, 184, 333
Tru1I TTAA 3 cut(s) 177, 726, 908
Tru9I TTAA 3 cut(s) 177, 726, 908
TscAI CASTG 1 cut(s) 625
TseFI GTSAC 1 cut(s) 758
TseI GCWGC 2 cut(s) 503, 719
Tsp45I GTSAC 1 cut(s) 758
TspDTI ATGAA 7 cut(s) 43, 372, 477, 507, 531, 551, 681
TspRI CASTG 1 cut(s) 625
Van91I CCANNNNNTGG 1 cut(s) 689
VneI GTGCAC 1 cut(s) 920
XapI RAATTY 2 cut(s) 82, 752
XceI RCATGY 1 cut(s) 862
XmnI GAANNNNTTC 1 cut(s) 632
Zsp2I ATGCAT 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.