Rh4DG090300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
13655765 .. 13656112
348 bp
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UTR
Exon/CDS
Intron
Rh4DG090300.1

Sequence Viewer

Length: 348 bp
ATGGAGAGTGGGATTGAGAGCGAAAGTTCGGAGTCGGAGAGTGAGAGTGAGAGTGAGAGTGAGAGTTCATCAGCAGCATCATCTTCTTTGAGTAGTAGCTCTAGTGATGAGGAGGAGGAGGATGAGAGAGAGAGTGATGATATGGATGAGGAGAAGGATGGAGAAGGGAATGTGAAGGCGGAGGCGGAGAAGGAGGGCAATGAGGAGGCTTGTGAACTTGAAGAAGGTGAGATAAGTGGTGCAGAGCAGATAGGTAATGGAAGTGGTGATGAGGAGATTGACCGTGAAAGTTTTCAGGTGGGATTCCAATTTTGGGAGTGGAGATGGGAGATTGAAATTTTGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

115

Amino Acids

12.74

Weight (kDa)

4.05

Isoelectric Point (pI)

92.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 179, 185
AcsI RAATTY 1 cut(s) 336
AfiI CCNNNNNNNGG 1 cut(s) 313
AgsI TTSAA 2 cut(s) 221, 335
AluBI AGCT 1 cut(s) 99
AluI AGCT 1 cut(s) 99
ApeKI GCWGC 1 cut(s) 74
ApoI RAATTY 1 cut(s) 336
Asp700I GAANNNNTTC 1 cut(s) 291
AsuHPI GGTGA 2 cut(s) 239, 278
BbvI GCAGC 1 cut(s) 86
BccI CCATC 2 cut(s) 152, 318
BfaI CTAG 1 cut(s) 102
BisI GCNGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 76
BmsI GCATC 1 cut(s) 86
Bsc4I CCNNNNNNNGG 1 cut(s) 313
Bse3DI GCAATG 1 cut(s) 205
BseGI GGATG 3 cut(s) 127, 151, 163
BseLI CCNNNNNNNGG 1 cut(s) 313
BseMI GCAATG 1 cut(s) 205
BseRI GAGGAG 6 cut(s) 125, 128, 131, 164, 218, 287
BseXI GCAGC 1 cut(s) 86
BsgI GTGCAG 1 cut(s) 261
BslI CCNNNNNNNGG 1 cut(s) 313
BspACI CCGC 2 cut(s) 179, 185
BsrDI GCAATG 1 cut(s) 205
Bst4CI ACNGT 1 cut(s) 284
BstF5I GGATG 3 cut(s) 127, 151, 163
BstV1I GCAGC 1 cut(s) 86
BtsCI GGATG 3 cut(s) 127, 151, 163
CviJI RGCY 2 cut(s) 99, 209
CviKI_1 RGCY 2 cut(s) 99, 209
EciI GGCGGA 2 cut(s) 194, 200
FaiI YATR 1 cut(s) 143
Fnu4HI GCNGC 1 cut(s) 75
FokI GGATG 3 cut(s) 134, 158, 170
Fsp4HI GCNGC 1 cut(s) 75
FspBI CTAG 1 cut(s) 102
GluI GCNGC 1 cut(s) 75
HinfI GANTC 2 cut(s) 32, 303
HphI GGTGA 2 cut(s) 239, 278
Hpy166II GTNNAC 1 cut(s) 215
Hpy188I TCNGA 2 cut(s) 31, 37
Hpy8I GTNNAC 1 cut(s) 215
HpyAV CCTTC 5 cut(s) 148, 158, 169, 184, 218
HpyCH4III ACNGT 1 cut(s) 284
HpyCH4V TGCA 1 cut(s) 242
LpnPI CCDG 1 cut(s) 281
Lsp1109I GCAGC 1 cut(s) 86
LweI GCATC 1 cut(s) 86
MaeI CTAG 1 cut(s) 102
MboII GAAGA 2 cut(s) 75, 233
MluCI AATT 2 cut(s) 308, 336
MlyI GAGTC 1 cut(s) 41
MmeI TCCRAC 1 cut(s) 15
MroXI GAANNNNTTC 1 cut(s) 291
PdmI GAANNNNTTC 1 cut(s) 291
PfeI GAWTC 1 cut(s) 303
PkrI GCNGC 1 cut(s) 76
PleI GAGTC 1 cut(s) 40
PpsI GAGTC 1 cut(s) 40
SatI GCNGC 1 cut(s) 75
SchI GAGTC 1 cut(s) 41
SetI ASST 4 cut(s) 101, 229, 256, 300
SfaNI GCATC 1 cut(s) 86
SgeI CNNG 5 cut(s) 114, 222, 230, 296, 308
Sse9I AATT 2 cut(s) 308, 336
SsiI CCGC 2 cut(s) 179, 185
SspMI CTAG 1 cut(s) 102
TaaI ACNGT 1 cut(s) 284
TasI AATT 2 cut(s) 308, 336
TfiI GAWTC 1 cut(s) 303
TseI GCWGC 1 cut(s) 74
TspDTI ATGAA 1 cut(s) 57
XapI RAATTY 1 cut(s) 336
XmnI GAANNNNTTC 1 cut(s) 291
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.