Rh5AG328100

Belongs to the imidazoleglycerol-phosphate dehydratase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
49617495 .. 49638431
20937 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG328100.1

Sequence Viewer

Length: 456 bp
ATGGACATACCTGCAAATGGCATAAAGCAATATTGTCAAGTAGATTTTGCAAAGCAACGTAGTGGAAAATTTGGATACAGCAAGAAGGAAACTGGGAGAAAAGATGAAATAGACAATTGTTTTGAGCAGGAGATGAATGACAACCAAAAAGATGAAGTGATTTGCGAGGGAAGCAAAAGCATGAGGTGGTCTGCCAGAGATGGCTTCCCTGATCTTACTTCCTCACCTCCAATGATGACTAAGAAGCTTGCTGGAAGGAACTCTCACCATATTATTGAGGCAACCTTCAAAGCATTTGCAAGGGCTCTTCGACAAGCACTAGAATATGACCCACGTCGCCTTGGGAGCATTCCAAGGTTTGATAAGAACCTTGAGTGGATAAATTTCTCCAGGAATCTTTTCTTGCTCTTTGGTAAATCAGTGATAATATTTACTCGGCATTTGGAACTCATATAA

Protein Analysis

151

Amino Acids

17.53

Weight (kDa)

9.19

Isoelectric Point (pI)

35.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 19
AcsI RAATTY 2 cut(s) 68, 382
AfiI CCNNNNNNNGG 1 cut(s) 17
AgsI TTSAA 1 cut(s) 289
AjiI CACGTC 1 cut(s) 335
AjnI CCWGG 1 cut(s) 389
AluBI AGCT 1 cut(s) 247
AluI AGCT 1 cut(s) 247
ApoI RAATTY 2 cut(s) 68, 382
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
Asp700I GAANNNNTTC 1 cut(s) 398
AsuHPI GGTGA 2 cut(s) 216, 257
BanII GRGCYC 1 cut(s) 307
BccI CCATC 1 cut(s) 194
BciT130I CCWGG 1 cut(s) 391
BciVI GTATCC 1 cut(s) 68
BfaI CTAG 1 cut(s) 320
BfuAI ACCTGC 1 cut(s) 19
BfuI GTATCC 1 cut(s) 68
Bme1390I CCNGG 1 cut(s) 391
BmgBI CACGTC 1 cut(s) 335
BmrFI CCNGG 1 cut(s) 391
BmrI ACTGGG 1 cut(s) 102
BmuI ACTGGG 1 cut(s) 102
BoxI GACNNNNGTC 1 cut(s) 333
BpmI CTGGAG 1 cut(s) 373
BpuEI CTTGAG 1 cut(s) 392
BsaJI CCNNGG 2 cut(s) 340, 353
Bsc4I CCNNNNNNNGG 1 cut(s) 17
Bse1I ACTGG 1 cut(s) 97
BseBI CCWGG 1 cut(s) 391
BseDI CCNNGG 2 cut(s) 340, 353
BseLI CCNNNNNNNGG 1 cut(s) 17
BseNI ACTGG 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 17
BsmI GAATGC 1 cut(s) 348
Bsp1286I GDGCHC 1 cut(s) 307
Bsp143I GATC 1 cut(s) 211
BspMI ACCTGC 1 cut(s) 19
BspQI GCTCTTC 1 cut(s) 312
BsrI ACTGG 1 cut(s) 97
BssECI CCNNGG 2 cut(s) 340, 353
BssMI GATC 1 cut(s) 211
BssT1I CCWWGG 2 cut(s) 340, 353
Bst2UI CCWGG 1 cut(s) 391
Bst6I CTCTTC 1 cut(s) 312
BstC8I GCNNGC 1 cut(s) 249
BstDEI CTNAG 1 cut(s) 240
BstKTI GATC 1 cut(s) 214
BstMBI GATC 1 cut(s) 211
BstMWI GCNNNNNNNGC 2 cut(s) 171, 345
BstNI CCWGG 1 cut(s) 391
BstPAI GACNNNNGTC 1 cut(s) 333
BstSCI CCNGG 1 cut(s) 389
BsuI GTATCC 1 cut(s) 68
BtrI CACGTC 1 cut(s) 335
BtsIMutI CAGTG 1 cut(s) 426
BveI ACCTGC 1 cut(s) 19
Cac8I GCNNGC 1 cut(s) 249
CviAII CATG 1 cut(s) 181
CviJI RGCY 3 cut(s) 204, 247, 305
CviKI_1 RGCY 3 cut(s) 204, 247, 305
DdeI CTNAG 1 cut(s) 240
DpnI GATC 1 cut(s) 213
DpnII GATC 1 cut(s) 211
Eam1104I CTCTTC 1 cut(s) 312
EarI CTCTTC 1 cut(s) 312
Eco130I CCWWGG 2 cut(s) 340, 353
Eco24I GRGCYC 1 cut(s) 307
EcoRII CCWGG 1 cut(s) 389
EcoT14I CCWWGG 2 cut(s) 340, 353
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 2 cut(s) 340, 353
FaeI CATG 1 cut(s) 184
FaiI YATR 7 cut(s) 8, 23, 182, 270, 327, 452, 454
FatI CATG 1 cut(s) 180
FriOI GRGCYC 1 cut(s) 307
FspBI CTAG 1 cut(s) 320
GsuI CTGGAG 1 cut(s) 373
Hin1II CATG 1 cut(s) 184
HindIII AAGCTT 1 cut(s) 245
HinfI GANTC 1 cut(s) 394
HphI GGTGA 2 cut(s) 216, 257
Hpy99I CGWCG 1 cut(s) 339
HpyAV CCTTC 3 cut(s) 79, 249, 295
HpyCH4IV ACGT 2 cut(s) 58, 334
HpyCH4V TGCA 3 cut(s) 14, 50, 299
HpyF10VI GCNNNNNNNGC 2 cut(s) 171, 345
HpyF3I CTNAG 1 cut(s) 240
HpySE526I ACGT 2 cut(s) 58, 334
Hsp92II CATG 1 cut(s) 184
Kzo9I GATC 1 cut(s) 211
LguI GCTCTTC 1 cut(s) 312
LmnI GCTCC 1 cut(s) 345
LpnPI CCDG 8 cut(s) 24, 78, 113, 208, 222, 237, 376, 403
MaeI CTAG 1 cut(s) 320
MaeII ACGT 2 cut(s) 58, 334
MalI GATC 1 cut(s) 213
MboI GATC 1 cut(s) 211
MboII GAAGA 1 cut(s) 299
MfeI CAATTG 1 cut(s) 115
MhlI GDGCHC 1 cut(s) 307
MluCI AATT 3 cut(s) 68, 115, 382
MnlI CCTC 5 cut(s) 160, 177, 232, 237, 271
MroXI GAANNNNTTC 1 cut(s) 398
MspR9I CCNGG 1 cut(s) 391
MunI CAATTG 1 cut(s) 115
Mva1269I GAATGC 1 cut(s) 348
MvaI CCWGG 1 cut(s) 391
MwoI GCNNNNNNNGC 2 cut(s) 171, 345
NdeII GATC 1 cut(s) 211
NlaIII CATG 1 cut(s) 184
NmeAIII GCCGAG 1 cut(s) 415
PciSI GCTCTTC 1 cut(s) 312
PctI GAATGC 1 cut(s) 348
PdmI GAANNNNTTC 1 cut(s) 398
PfeI GAWTC 1 cut(s) 394
PfoI TCCNGGA 1 cut(s) 389
PshAI GACNNNNGTC 1 cut(s) 333
Psp6I CCWGG 1 cut(s) 389
PspGI CCWGG 1 cut(s) 389
SapI GCTCTTC 1 cut(s) 312
Sau3AI GATC 1 cut(s) 211
ScrFI CCNGG 1 cut(s) 391
SduI GDGCHC 1 cut(s) 307
SetI ASST 9 cut(s) 13, 61, 188, 229, 249, 287, 337, 359, 372
SmlI CTYRAG 1 cut(s) 371
SmoI CTYRAG 1 cut(s) 371
Sse9I AATT 3 cut(s) 68, 115, 382
SspI AATATT 2 cut(s) 32, 429
SspMI CTAG 1 cut(s) 320
StyD4I CCNGG 1 cut(s) 389
StyI CCWWGG 2 cut(s) 340, 353
TaiI ACGT 2 cut(s) 61, 337
TaqI TCGA 1 cut(s) 310
TasI AATT 3 cut(s) 68, 115, 382
TfiI GAWTC 1 cut(s) 394
TscAI CASTG 1 cut(s) 426
TspDTI ATGAA 3 cut(s) 120, 149, 168
TspRI CASTG 1 cut(s) 426
XapI RAATTY 2 cut(s) 68, 382
XmnI GAANNNNTTC 1 cut(s) 398
XspI CTAG 1 cut(s) 320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.