Rh6AG269200

Belongs to the universal ribosomal protein uS3 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
46208710 .. 46208981
272 bp
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UTR
Exon/CDS
Intron
Rh6AG269200.1

Sequence Viewer

Length: 180 bp
ATGGCCACCCAGATGAGCAAGAAGCAAAAGTTCGTTGCTTATGGTGTTTTCTTCGCCGAGCTCAACGAGCTTCTGATGAGGGAGCTCTTCGAGGACGGCTACTCTAGCACTGAGGTTAGGGTTACGCCAACGCGCACTGAGATCATAATTAGGGCTACTCGGACTCAAAACGTGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

59

Amino Acids

6.86

Weight (kDa)

8.14

Isoelectric Point (pI)

31.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 133
AcoI YGGCCR 1 cut(s) 3
AluBI AGCT 3 cut(s) 61, 70, 85
AluI AGCT 3 cut(s) 61, 70, 85
Alw21I GWGCWC 3 cut(s) 63, 87, 177
AoxI GGCC 1 cut(s) 3
AspLEI GCGC 1 cut(s) 135
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 2 cut(s) 63, 87
Bbv12I GWGCWC 3 cut(s) 63, 87, 177
BceAI ACGGC 1 cut(s) 112
BfaI CTAG 1 cut(s) 105
BseMII CTCAG 2 cut(s) 102, 129
Bsh1236I CGCG 1 cut(s) 133
BshFI GGCC 1 cut(s) 5
BsiHKAI GWGCWC 3 cut(s) 63, 87, 177
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 3 cut(s) 63, 87, 177
Bsp143I GATC 1 cut(s) 141
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 2 cut(s) 103, 130
BspFNI CGCG 1 cut(s) 133
BspQI GCTCTTC 1 cut(s) 92
BssMI GATC 1 cut(s) 141
Bst6I CTCTTC 1 cut(s) 92
BstDEI CTNAG 2 cut(s) 111, 138
BstFNI CGCG 1 cut(s) 133
BstHHI GCGC 1 cut(s) 135
BstKTI GATC 1 cut(s) 144
BstMBI GATC 1 cut(s) 141
BstMWI GCNNNNNNNGC 2 cut(s) 67, 105
BstUI CGCG 1 cut(s) 133
BsuRI GGCC 1 cut(s) 5
BtsIMutI CAGTG 2 cut(s) 108, 135
CfoI GCGC 1 cut(s) 135
CviJI RGCY 6 cut(s) 5, 61, 70, 85, 99, 155
CviKI_1 RGCY 6 cut(s) 5, 61, 70, 85, 99, 155
DdeI CTNAG 2 cut(s) 111, 138
DpnI GATC 1 cut(s) 143
DpnII GATC 1 cut(s) 141
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 92
EarI CTCTTC 1 cut(s) 92
Ecl136II GAGCTC 2 cut(s) 61, 85
Eco24I GRGCYC 2 cut(s) 63, 87
Eco53kI GAGCTC 2 cut(s) 61, 85
EcoICRI GAGCTC 2 cut(s) 61, 85
EcoT38I GRGCYC 2 cut(s) 63, 87
FaiI YATR 2 cut(s) 42, 146
FriOI GRGCYC 2 cut(s) 63, 87
FspBI CTAG 1 cut(s) 105
GlaI GCGC 1 cut(s) 134
HaeIII GGCC 1 cut(s) 5
HhaI GCGC 1 cut(s) 135
Hin6I GCGC 1 cut(s) 133
HinP1I GCGC 1 cut(s) 133
HinfI GANTC 1 cut(s) 163
Hpy188I TCNGA 3 cut(s) 75, 162, 179
HpyCH4IV ACGT 1 cut(s) 171
HpyF10VI GCNNNNNNNGC 2 cut(s) 67, 105
HpyF3I CTNAG 2 cut(s) 111, 138
HpySE526I ACGT 1 cut(s) 171
HspAI GCGC 1 cut(s) 133
Kzo9I GATC 1 cut(s) 141
LguI GCTCTTC 1 cut(s) 92
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 1 cut(s) 23
MaeI CTAG 1 cut(s) 105
MaeII ACGT 1 cut(s) 171
MaeIII GTNAC 1 cut(s) 121
MalI GATC 1 cut(s) 143
MboI GATC 1 cut(s) 141
MboII GAAGA 2 cut(s) 43, 79
MhlI GDGCHC 3 cut(s) 63, 87, 177
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 1 cut(s) 147
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 157
MnlI CCTC 3 cut(s) 72, 85, 106
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 1 cut(s) 11
Msp20I TGGCCA 1 cut(s) 5
MvnI CGCG 1 cut(s) 133
MwoI GCNNNNNNNGC 2 cut(s) 67, 105
NdeII GATC 1 cut(s) 141
NmeAIII GCCGAG 1 cut(s) 82
PciSI GCTCTTC 1 cut(s) 92
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
Psp124BI GAGCTC 2 cut(s) 63, 87
RseI CAYNNNNRTG 1 cut(s) 11
SacI GAGCTC 2 cut(s) 63, 87
SapI GCTCTTC 1 cut(s) 92
Sau3AI GATC 1 cut(s) 141
SchI GAGTC 1 cut(s) 157
SduI GDGCHC 3 cut(s) 63, 87, 177
SetI ASST 5 cut(s) 63, 72, 87, 117, 174
SgeI CNNG 8 cut(s) 22, 31, 70, 79, 103, 117, 144, 171
SmiMI CAYNNNNRTG 1 cut(s) 11
Sse9I AATT 1 cut(s) 147
SspMI CTAG 1 cut(s) 105
SstI GAGCTC 2 cut(s) 63, 87
TaiI ACGT 1 cut(s) 174
TaqI TCGA 1 cut(s) 90
TasI AATT 1 cut(s) 147
TscAI CASTG 2 cut(s) 115, 142
TspRI CASTG 2 cut(s) 115, 142
XspI CTAG 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.