50S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G37660 |
| fragaria_vesca | FvH4_2g11030 FvH4_5g26350 FvH4_5g26350 FvH4_5g26350 |
| malus_domestica | MD04G1041700.v1.1 MD05G1040200.v1.1 MD10G1046200.v1.1 |
| prunus_persica | Prupe.1G195400_v2.0.a1 Prupe.8G053900_v2.0.a1 |
| pyrus_communis | pycom04g03680 pycom05g03280 pycom10g03240 |
| rosa_chinensis | RchiOBHm_Chr6g0269241 RchiOBHm_Chr7g0217101 RchiOBHm_Chr7g0217161 |
| rosa_laevigata | RLG00000002507 RLG00000013869 |
| rosa_multiflora | Rmu_co8398301.1_g000001 Rmu_sc0002750.1_g000008 Rmu_sc0007780.1_g000007 Rmu_ssc0000474.1_g000022 |
| rosa_roxburghii | Rroxscaffold_3G00242570 Rroxscaffold_7G00198910 |
| rosa_rugosa | Rorug06G0046900 Rorug06G0046900 Rorug07G0166200 Rorug07G0166300 Rorug07G0166300 |
| rosa_samantha | Rh6AG166600 Rh6BG172200 Rh6CG166100 Rh6DG157700 Rh7AG305500 Rh7AG305800 Rh7BG297100 Rh7CG324600 Rh7CG325000 Rh7DG305700 |
| rosa_wichuraiana | Rw6G014390 Rw7G025950 Rw7G025980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 25 |
| AccIII | TCCGGA | 1 cut(s) | 11 |
| AgsI | TTSAA | 1 cut(s) | 154 |
| AluBI | AGCT | 1 cut(s) | 188 |
| AluI | AGCT | 1 cut(s) | 188 |
| Alw26I | GTCTC | 1 cut(s) | 196 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 56 |
| Aor13HI | TCCGGA | 1 cut(s) | 11 |
| AoxI | GGCC | 2 cut(s) | 166, 202 |
| ApeKI | GCWGC | 1 cut(s) | 59 |
| AspLEI | GCGC | 1 cut(s) | 93 |
| AspS9I | GGNCC | 6 cut(s) | 14, 75, 112, 166, 182, 203 |
| AvaII | GGWCC | 4 cut(s) | 14, 75, 112, 182 |
| BauI | CACGAG | 1 cut(s) | 22 |
| BbvI | GCAGC | 1 cut(s) | 71 |
| BccI | CCATC | 1 cut(s) | 152 |
| BcoDI | GTCTC | 1 cut(s) | 196 |
| BfmI | CTRYAG | 1 cut(s) | 57 |
| BfuAI | ACCTGC | 1 cut(s) | 25 |
| BisI | GCNGC | 1 cut(s) | 60 |
| BlsI | GCNGC | 1 cut(s) | 61 |
| Bme18I | GGWCC | 4 cut(s) | 14, 75, 112, 182 |
| BmgT120I | GGNCC | 6 cut(s) | 14, 75, 112, 166, 182, 203 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 1 cut(s) | 71 |
| BsaWI | WCCGGW | 1 cut(s) | 11 |
| BseAI | TCCGGA | 1 cut(s) | 11 |
| BseDI | CCNNGG | 1 cut(s) | 71 |
| BseGI | GGATG | 1 cut(s) | 144 |
| BseMII | CTCAG | 1 cut(s) | 207 |
| BseXI | GCAGC | 1 cut(s) | 71 |
| BsgI | GTGCAG | 1 cut(s) | 46 |
| BshFI | GGCC | 2 cut(s) | 168, 204 |
| BsiSI | CCGG | 1 cut(s) | 12 |
| BsmAI | GTCTC | 1 cut(s) | 196 |
| BsnI | GGCC | 2 cut(s) | 168, 204 |
| Bsp13I | TCCGGA | 1 cut(s) | 11 |
| BspANI | GGCC | 2 cut(s) | 168, 204 |
| BspCNI | CTCAG | 1 cut(s) | 206 |
| BspEI | TCCGGA | 1 cut(s) | 11 |
| BspMAI | CTGCAG | 1 cut(s) | 61 |
| BspMI | ACCTGC | 1 cut(s) | 25 |
| BssECI | CCNNGG | 1 cut(s) | 71 |
| BssSI | CACGAG | 1 cut(s) | 22 |
| Bst2BI | CACGAG | 1 cut(s) | 22 |
| Bst6I | CTCTTC | 1 cut(s) | 155 |
| BstDEI | CTNAG | 1 cut(s) | 193 |
| BstF5I | GGATG | 1 cut(s) | 144 |
| BstHHI | GCGC | 1 cut(s) | 93 |
| BstMAI | GTCTC | 1 cut(s) | 196 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 59 |
| BstSFI | CTRYAG | 1 cut(s) | 57 |
| BstV1I | GCAGC | 1 cut(s) | 71 |
| BsuRI | GGCC | 2 cut(s) | 168, 204 |
| BtsCI | GGATG | 1 cut(s) | 144 |
| BtsI | GCAGTG | 1 cut(s) | 54 |
| BtsIMutI | CAGTG | 1 cut(s) | 54 |
| BveI | ACCTGC | 1 cut(s) | 25 |
| CaiI | CAGNNNCTG | 1 cut(s) | 56 |
| CfoI | GCGC | 1 cut(s) | 93 |
| Cfr13I | GGNCC | 6 cut(s) | 14, 75, 112, 166, 182, 203 |
| CviAII | CATG | 1 cut(s) | 134 |
| CviJI | RGCY | 5 cut(s) | 53, 70, 168, 188, 204 |
| CviKI_1 | RGCY | 5 cut(s) | 53, 70, 168, 188, 204 |
| DdeI | CTNAG | 1 cut(s) | 193 |
| Eam1104I | CTCTTC | 1 cut(s) | 155 |
| EarI | CTCTTC | 1 cut(s) | 155 |
| Eco47I | GGWCC | 4 cut(s) | 14, 75, 112, 182 |
| FaeI | CATG | 1 cut(s) | 137 |
| FaiI | YATR | 2 cut(s) | 135, 180 |
| FatI | CATG | 1 cut(s) | 133 |
| Fnu4HI | GCNGC | 1 cut(s) | 60 |
| FokI | GGATG | 1 cut(s) | 131 |
| Fsp4HI | GCNGC | 1 cut(s) | 60 |
| GlaI | GCGC | 1 cut(s) | 92 |
| GluI | GCNGC | 1 cut(s) | 60 |
| HaeIII | GGCC | 2 cut(s) | 168, 204 |
| HapII | CCGG | 1 cut(s) | 12 |
| HhaI | GCGC | 1 cut(s) | 93 |
| Hin1II | CATG | 1 cut(s) | 137 |
| Hin6I | GCGC | 1 cut(s) | 91 |
| HinP1I | GCGC | 1 cut(s) | 91 |
| HinfI | GANTC | 2 cut(s) | 82, 218 |
| HpaII | CCGG | 1 cut(s) | 12 |
| Hpy188I | TCNGA | 1 cut(s) | 217 |
| Hpy188III | TCNNGA | 2 cut(s) | 12, 86 |
| HpyCH4V | TGCA | 2 cut(s) | 27, 59 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 59 |
| HpyF3I | CTNAG | 1 cut(s) | 193 |
| Hsp92II | CATG | 1 cut(s) | 137 |
| HspAI | GCGC | 1 cut(s) | 91 |
| Kpn2I | TCCGGA | 1 cut(s) | 11 |
| LpnPI | CCDG | 5 cut(s) | 25, 30, 180, 198, 207 |
| Lsp1109I | GCAGC | 1 cut(s) | 71 |
| MboII | GAAGA | 2 cut(s) | 142, 204 |
| MnlI | CCTC | 8 cut(s) | 31, 53, 81, 116, 123, 125, 158, 179 |
| MroI | TCCGGA | 1 cut(s) | 11 |
| MseI | TTAA | 1 cut(s) | 159 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| MspI | CCGG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 59 |
| NlaIII | CATG | 1 cut(s) | 137 |
| PfeI | GAWTC | 2 cut(s) | 82, 218 |
| PkrI | GCNGC | 1 cut(s) | 61 |
| PspPI | GGNCC | 6 cut(s) | 14, 75, 112, 166, 182, 203 |
| PstI | CTGCAG | 1 cut(s) | 61 |
| PstNI | CAGNNNCTG | 1 cut(s) | 56 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| SaqAI | TTAA | 1 cut(s) | 159 |
| SatI | GCNGC | 1 cut(s) | 60 |
| Sau96I | GGNCC | 6 cut(s) | 14, 75, 112, 166, 182, 203 |
| SetI | ASST | 4 cut(s) | 19, 108, 117, 190 |
| SfcI | CTRYAG | 1 cut(s) | 57 |
| SinI | GGWCC | 4 cut(s) | 14, 75, 112, 182 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| TaqII | GACCGA | 1 cut(s) | 63 |
| TfiI | GAWTC | 2 cut(s) | 82, 218 |
| Tru1I | TTAA | 1 cut(s) | 159 |
| Tru9I | TTAA | 1 cut(s) | 159 |
| TscAI | CASTG | 1 cut(s) | 61 |
| TseI | GCWGC | 1 cut(s) | 59 |
| TspRI | CASTG | 1 cut(s) | 61 |
| VpaK11BI | GGWCC | 4 cut(s) | 14, 75, 112, 182 |