AT1G08440

aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
2662967 .. 2665584
2618 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08440.1

Sequence Viewer

Length: 1506 bp
ATGGAGAAAGTGAGAGAGATTGTGAGAGAAGGGAGGAGAGTAGGTAAAGAAGATCCGAGAAGAGTAGTGCATGCTTTCAAAGTGGGACTTGCTCTTGCTTTGGTCTCTTCCTTCTATTATTATCAACCTCTCTACGACAACTTCGGTGTCAATGCAATGTGGGCTGTCATGACCGTCGTTGTTGTTTTTGAATTCTCTGTAGGGGCCACACTTGGGAAAGGACTAAATAGAGCAGTGGCAACATTGGTAGCAGGAGGACTAGGGATTGGAGCTCATCACCTAGCAAGTTTGTCGGGTCCAACAGTAGAACCCATTCTTCTTGCCATCTTTGTCTTTGTCCTAGCTGCATTGTCGACGTTCGTGAGGTTCTTCCCGCGGGTGAAGGCAAGATATGATTATGGGGTATTGATATTCATATTGACGTTCGCACTGATATCAGTTTCGGGGTTTAGAGAGGACGAGATATTGGATTTGGCGCATAAGAGACTATCGACAGTGATAATGGGAGGAGTTAGTTGCGTGCTTATCTCTATCTTTGTCTGCCCTGTTTGGGCAGGACAAGACCTTCATTCTCTCCTTGCCTCCAACTTTGACACTCTCTCCCACTTCCTTCAAGAATTTGGGGACGAATATTTTGAAGCGACAGAGGATGGGGACATCAAAGAAGTGGAGAAGAGGAGAAGGAATCTTGAGAGATATAAAAGTGTTCTCAACTCAAAAAGCAATGAAGAAGCTTTGGCTAATTTTGCAAAATGGGAACCGCGTCATGGCCAATTTAGATTTCGGCATCCATGGAGACAATATCTTGCCGTGGGTGCATTACTCCGGCAATCTGCTTACCGAATTGATGCCTTGAATTCAAACATCAACTCAGATATGCAGATCCCAATGGACATTAAAAAGAAAATAGAGGAACCATTAAGAAGAATGAGCTCGGAGTCGGGGAAGTCAATGAAAGAAGTGTCCATTTCATTAAAGAACATGACAATATCATCTTCTTTTGATATCCATGTAGTAAACTCACAATCTGCATGCAAGACTCTTTCCACTTTACTTAAATCAGGCATCTTAAACGATGTTGAGCCTCTACAAATGATCTCATTAATGACGACAGTTTCTCTGCTCATTGACATTGTAAACTTAACCGAAAAGATCTCAGAATCCGTACATGAGCTTGCATCCGCAGCAAAATTTAAGAACAAGAAGAAGCCGTCTAAGTCGAATTCGGGAAGCATTGGTCAAGCCATGCCAAATAAATCTCATGATGATGATGATCATGTTGTTACAATTTTAGGTGACGTTGACACATCAAACAATGTTGATCAATCGCAATCGCATGGAGAGATCTCAGTGGACTCATGTCATCATGTCACCATAAAGATTAACGATGATGATTCGATCCATGACAAAAATGAAGATGGTGATATACATGTACATACAAATCGTGTATCATGTGATCACACTAATGCTAGTGATCTTTTAGATAGTGGCGTTAAAAAGAATTAG

Protein Analysis

501

Amino Acids

55.68

Weight (kDa)

6.45

Isoelectric Point (pI)

40.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 13 - 356 1e-151 Aluminium activated malate transporter
FUSC_2 PF13515 51 - 174 8e-09 Fusaric acid resistance protein-like
FUSC PF04632 52 - 206 1.4e-08 Fusaric acid resistance protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000374)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis pycom03g10930 pycom11g14730
rosa_chinensis RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 353
AccII CGCG 2 cut(s) 376, 763
AciI CCGC 4 cut(s) 374, 376, 761, 1182
AclWI GGATC 3 cut(s) 47, 877, 1393
AcoI YGGCCR 1 cut(s) 769
AcsI RAATTY 5 cut(s) 191, 617, 856, 1190, 1222
AfaI GTAC 2 cut(s) 1167, 1434
AfiI CCNNNNNNNGG 3 cut(s) 213, 550, 767
AflIII ACRYGT 1 cut(s) 1429
AgsI TTSAA 6 cut(s) 79, 191, 614, 638, 856, 861
AjuI GAANNNNNNNTTGG 2 cut(s) 765, 797
AluBI AGCT 5 cut(s) 272, 344, 734, 933, 1174
AluI AGCT 5 cut(s) 272, 344, 734, 933, 1174
Alw21I GWGCWC 2 cut(s) 274, 935
Alw26I GTCTC 3 cut(s) 109, 478, 790
AlwI GGATC 3 cut(s) 47, 877, 1393
AoxI GGCC 2 cut(s) 204, 769
ApeKI GCWGC 2 cut(s) 344, 1184
ApoI RAATTY 5 cut(s) 191, 617, 856, 1190, 1222
ArsI GACNNNNNNTTYG 2 cut(s) 617, 649
AseI ATTAAT 1 cut(s) 1103
Asp700I GAANNNNTTC 1 cut(s) 312
AspLEI GCGC 1 cut(s) 478
AspS9I GGNCC 2 cut(s) 204, 296
AsuHPI GGTGA 5 cut(s) 269, 391, 1307, 1363, 1433
AvaII GGWCC 1 cut(s) 296
BalI TGGCCA 1 cut(s) 771
BanII GRGCYC 2 cut(s) 274, 935
Bbv12I GWGCWC 2 cut(s) 274, 935
BbvI GCAGC 2 cut(s) 331, 1196
BccI CCATC 3 cut(s) 332, 644, 1412
BceAI ACGGC 2 cut(s) 794, 1195
BcgI CGANNNNNNTGC 2 cut(s) 273, 307
BclI TGATCA 3 cut(s) 1273, 1321, 1456
BcoDI GTCTC 3 cut(s) 109, 478, 790
BfaI CTAG 4 cut(s) 260, 281, 341, 1470
BfmI CTRYAG 1 cut(s) 198
BglII AGATCT 2 cut(s) 1152, 1344
BisI GCNGC 2 cut(s) 345, 1185
BlsI GCNGC 2 cut(s) 346, 1186
Bme18I GGWCC 1 cut(s) 296
BmgT120I GGNCC 2 cut(s) 204, 296
BmiI GGNNCC 4 cut(s) 205, 297, 759, 915
BmsI GCATC 4 cut(s) 796, 838, 1074, 1187
BoxI GACNNNNGTC 1 cut(s) 1359
BpuEI CTTGAG 1 cut(s) 710
BsaBI GATNNNNATC 1 cut(s) 1272
BsaI GGTCTC 1 cut(s) 109
BsaJI CCNNGG 3 cut(s) 374, 791, 810
BsaXI ACNNNNNCTCC 4 cut(s) 28, 58, 584, 614
Bsc4I CCNNNNNNNGG 3 cut(s) 213, 550, 767
Bse3DI GCAATG 2 cut(s) 162, 730
Bse8I GATNNNNATC 1 cut(s) 1272
BseDI CCNNGG 3 cut(s) 374, 791, 810
BseGI GGATG 3 cut(s) 655, 787, 1178
BseJI GATNNNNATC 1 cut(s) 1272
BseLI CCNNNNNNNGG 3 cut(s) 213, 550, 767
BseMI GCAATG 2 cut(s) 162, 730
BseMII CTCAG 3 cut(s) 885, 1170, 1362
BseRI GAGGAG 3 cut(s) 49, 522, 691
BseXI GCAGC 2 cut(s) 331, 1196
Bsh1236I CGCG 2 cut(s) 376, 763
BshFI GGCC 2 cut(s) 206, 771
BsiHKAI GWGCWC 2 cut(s) 274, 935
BsiSI CCGG 1 cut(s) 826
BslFI GGGAC 3 cut(s) 99, 638, 668
BslI CCNNNNNNNGG 3 cut(s) 213, 550, 767
BsmAI GTCTC 3 cut(s) 109, 478, 790
BsmFI GGGAC 3 cut(s) 99, 638, 668
BsnI GGCC 2 cut(s) 206, 771
Bso31I GGTCTC 1 cut(s) 109
Bsp1286I GDGCHC 2 cut(s) 274, 935
Bsp1407I TGTACA 1 cut(s) 1432
Bsp19I CCATGG 1 cut(s) 791
BspACI CCGC 4 cut(s) 374, 376, 761, 1182
BspANI GGCC 2 cut(s) 206, 771
BspCNI CTCAG 3 cut(s) 884, 1169, 1361
BspFNI CGCG 2 cut(s) 376, 763
BspHI TCATGA 2 cut(s) 168, 1261
BspLI GGNNCC 4 cut(s) 205, 297, 759, 915
BspPI GGATC 3 cut(s) 47, 877, 1393
BspTNI GGTCTC 1 cut(s) 109
BsrDI GCAATG 2 cut(s) 162, 730
BsrGI TGTACA 1 cut(s) 1432
BssECI CCNNGG 3 cut(s) 374, 791, 810
BssT1I CCWWGG 1 cut(s) 791
Bst4CI ACNGT 4 cut(s) 175, 304, 496, 1114
Bst6I CTCTTC 3 cut(s) 55, 112, 668
BstAUI TGTACA 1 cut(s) 1432
BstC8I GCNNGC 4 cut(s) 72, 521, 1033, 1176
BstDEI CTNAG 4 cut(s) 871, 1156, 1215, 1348
BstDSI CCRYGG 3 cut(s) 374, 791, 810
BstF5I GGATG 3 cut(s) 655, 787, 1178
BstFNI CGCG 2 cut(s) 376, 763
BstHHI GCGC 1 cut(s) 478
BstMAI GTCTC 3 cut(s) 109, 478, 790
BstMWI GCNNNNNNNGC 4 cut(s) 161, 746, 815, 1184
BstNSI RCATGY 3 cut(s) 74, 1035, 1433
BstPAI GACNNNNGTC 1 cut(s) 1359
BstSFI CTRYAG 1 cut(s) 198
BstUI CGCG 2 cut(s) 376, 763
BstV1I GCAGC 2 cut(s) 331, 1196
BstX2I RGATCY 4 cut(s) 52, 882, 1152, 1344
BstYI RGATCY 4 cut(s) 52, 882, 1152, 1344
BsuRI GGCC 2 cut(s) 206, 771
BtgI CCRYGG 3 cut(s) 374, 791, 810
BtsCI GGATG 3 cut(s) 655, 787, 1178
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 4 cut(s) 240, 428, 501, 1356
Cac8I GCNNGC 4 cut(s) 72, 521, 1033, 1176
CciI TCATGA 2 cut(s) 168, 1261
CfoI GCGC 1 cut(s) 478
Cfr13I GGNCC 2 cut(s) 204, 296
Cfr42I CCGCGG 1 cut(s) 377
CseI GACGC 1 cut(s) 752
Csp6I GTAC 2 cut(s) 1166, 1433
CviQI GTAC 2 cut(s) 1166, 1433
DdeI CTNAG 4 cut(s) 871, 1156, 1215, 1348
EaeI YGGCCR 1 cut(s) 769
Eam1104I CTCTTC 3 cut(s) 55, 112, 668
EarI CTCTTC 3 cut(s) 55, 112, 668
Ecl136II GAGCTC 2 cut(s) 272, 933
Eco130I CCWWGG 1 cut(s) 791
Eco24I GRGCYC 2 cut(s) 274, 935
Eco31I GGTCTC 1 cut(s) 109
Eco32I GATATC 2 cut(s) 435, 1006
Eco47I GGWCC 1 cut(s) 296
Eco53kI GAGCTC 2 cut(s) 272, 933
EcoICRI GAGCTC 2 cut(s) 272, 933
EcoRI GAATTC 3 cut(s) 191, 856, 1222
EcoRV GATATC 2 cut(s) 435, 1006
EcoT14I CCWWGG 1 cut(s) 791
EcoT38I GRGCYC 2 cut(s) 274, 935
ErhI CCWWGG 1 cut(s) 791
FalI AAGNNNNNCTT 2 cut(s) 72, 104
FaqI GGGAC 3 cut(s) 99, 638, 668
FauI CCCGC 2 cut(s) 369, 381
FbaI TGATCA 3 cut(s) 1273, 1321, 1456
FblI GTMKAC 1 cut(s) 353
Fnu4HI GCNGC 2 cut(s) 345, 1185
FokI GGATG 3 cut(s) 662, 774, 1165
FriOI GRGCYC 2 cut(s) 274, 935
Fsp4HI GCNGC 2 cut(s) 345, 1185
FspBI CTAG 4 cut(s) 260, 281, 341, 1470
GlaI GCGC 1 cut(s) 477
GluI GCNGC 2 cut(s) 345, 1185
HaeIII GGCC 2 cut(s) 206, 771
HapII CCGG 1 cut(s) 826
HgaI GACGC 1 cut(s) 752
HhaI GCGC 1 cut(s) 478
Hin6I GCGC 1 cut(s) 476
HinP1I GCGC 1 cut(s) 476
HincII GTYRAC 2 cut(s) 354, 1303
HindII GTYRAC 2 cut(s) 354, 1303
HindIII AAGCTT 1 cut(s) 732
HinfI GANTC 6 cut(s) 685, 938, 1039, 1160, 1355, 1394
HpaII CCGG 1 cut(s) 826
HphI GGTGA 5 cut(s) 269, 391, 1307, 1363, 1433
Hpy166II GTNNAC 5 cut(s) 354, 1018, 1138, 1303, 1354
Hpy188I TCNGA 4 cut(s) 57, 874, 937, 1159
Hpy188III TCNNGA 6 cut(s) 169, 361, 614, 689, 1227, 1262
Hpy8I GTNNAC 5 cut(s) 354, 1018, 1138, 1303, 1354
Hpy99I CGWCG 2 cut(s) 179, 358
HpyAV CCTTC 6 cut(s) 23, 121, 376, 575, 620, 675
HpyCH4III ACNGT 4 cut(s) 175, 304, 496, 1114
HpyCH4IV ACGT 3 cut(s) 356, 422, 1299
HpyCH4V TGCA 9 cut(s) 70, 155, 347, 749, 818, 880, 1031, 1035, 1178
HpyF10VI GCNNNNNNNGC 4 cut(s) 161, 746, 815, 1184
HpyF3I CTNAG 4 cut(s) 871, 1156, 1215, 1348
HpySE526I ACGT 3 cut(s) 356, 422, 1299
HspAI GCGC 1 cut(s) 476
Ksp22I TGATCA 3 cut(s) 1273, 1321, 1456
KspI CCGCGG 1 cut(s) 377
LmnI GCTCC 1 cut(s) 269
LpnPI CCDG 5 cut(s) 237, 540, 558, 839, 1047
Lsp1109I GCAGC 2 cut(s) 331, 1196
LweI GCATC 4 cut(s) 796, 838, 1074, 1187
MaeI CTAG 4 cut(s) 260, 281, 341, 1470
MaeII ACGT 3 cut(s) 356, 422, 1299
MaeIII GTNAC 3 cut(s) 1282, 1295, 1369
MflI RGATCY 4 cut(s) 52, 882, 1152, 1344
MhlI GDGCHC 2 cut(s) 274, 935
MlsI TGGCCA 1 cut(s) 771
MluNI TGGCCA 1 cut(s) 771
MlyI GAGTC 3 cut(s) 947, 1033, 1349
MmeI TCCRAC 2 cut(s) 323, 609
Mox20I TGGCCA 1 cut(s) 771
MroXI GAANNNNTTC 1 cut(s) 312
MscI TGGCCA 1 cut(s) 771
MslI CAYNNNNRTG 2 cut(s) 1266, 1464
Msp20I TGGCCA 1 cut(s) 771
MspA1I CMGCKG 1 cut(s) 376
MspI CCGG 1 cut(s) 826
MvnI CGCG 2 cut(s) 376, 763
MwoI GCNNNNNNNGC 4 cut(s) 161, 746, 815, 1184
NcoI CCATGG 1 cut(s) 791
NlaIV GGNNCC 4 cut(s) 205, 297, 759, 915
NmuCI GTSAC 2 cut(s) 1295, 1369
NspI RCATGY 3 cut(s) 74, 1035, 1433
PaeI GCATGC 2 cut(s) 74, 1035
PagI TCATGA 2 cut(s) 168, 1261
PciI ACATGT 1 cut(s) 1429
PdmI GAANNNNTTC 1 cut(s) 312
PfeI GAWTC 3 cut(s) 685, 1160, 1394
PkrI GCNGC 2 cut(s) 346, 1186
PleI GAGTC 3 cut(s) 946, 1033, 1349
PpsI GAGTC 3 cut(s) 946, 1033, 1349
PscI ACATGT 1 cut(s) 1429
PshAI GACNNNNGTC 1 cut(s) 1359
PshBI ATTAAT 1 cut(s) 1103
Psp124BI GAGCTC 2 cut(s) 274, 935
PspN4I GGNNCC 4 cut(s) 205, 297, 759, 915
PspPI GGNCC 2 cut(s) 204, 296
PsuI RGATCY 4 cut(s) 52, 882, 1152, 1344
RsaI GTAC 2 cut(s) 1167, 1434
RsaNI GTAC 2 cut(s) 1166, 1433
RseI CAYNNNNRTG 2 cut(s) 1266, 1464
SacI GAGCTC 2 cut(s) 274, 935
SacII CCGCGG 1 cut(s) 377
SalI GTCGAC 1 cut(s) 352
SatI GCNGC 2 cut(s) 345, 1185
Sau96I GGNCC 2 cut(s) 204, 296
SchI GAGTC 3 cut(s) 947, 1033, 1349
SduI GDGCHC 2 cut(s) 274, 935
SfaNI GCATC 4 cut(s) 796, 838, 1074, 1187
SfcI CTRYAG 1 cut(s) 198
Sfr303I CCGCGG 1 cut(s) 377
SgrBI CCGCGG 1 cut(s) 377
SinI GGWCC 1 cut(s) 296
SmiMI CAYNNNNRTG 2 cut(s) 1266, 1464
SmlI CTYRAG 1 cut(s) 689
SmoI CTYRAG 1 cut(s) 689
SphI GCATGC 2 cut(s) 74, 1035
SsiI CCGC 4 cut(s) 374, 376, 761, 1182
SspI AATATT 1 cut(s) 632
SspMI CTAG 4 cut(s) 260, 281, 341, 1470
SstI GAGCTC 2 cut(s) 274, 935
StyI CCWWGG 1 cut(s) 791
TaaI ACNGT 4 cut(s) 175, 304, 496, 1114
TaiI ACGT 3 cut(s) 359, 425, 1302
TaqI TCGA 4 cut(s) 353, 491, 1220, 1397
TatI WGTACW 1 cut(s) 1432
TfiI GAWTC 3 cut(s) 685, 1160, 1394
TscAI CASTG 4 cut(s) 240, 435, 501, 1356
TseFI GTSAC 2 cut(s) 1295, 1369
TseI GCWGC 2 cut(s) 344, 1184
Tsp45I GTSAC 2 cut(s) 1295, 1369
TspDTI ATGAA 6 cut(s) 403, 557, 741, 960, 968, 1428
TspGWI ACGGA 1 cut(s) 1153
TspRI CASTG 4 cut(s) 240, 435, 501, 1356
VpaK11BI GGWCC 1 cut(s) 296
VspI ATTAAT 1 cut(s) 1103
XapI RAATTY 5 cut(s) 191, 617, 856, 1190, 1222
XceI RCATGY 3 cut(s) 74, 1035, 1433
XmiI GTMKAC 1 cut(s) 353
XmnI GAANNNNTTC 1 cut(s) 312
XspI CTAG 4 cut(s) 260, 281, 341, 1470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.