Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000374

Physical Location & Seq

Genomic Coordinates Reverse (-)

44039031 .. 44041962

Gene Structure 2932 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034512

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGGAGAACAGCAGCTGCGGCGGAGGGCCTTTCCGTTGCGTGGTGCGGTGGCTGAAGGCGGTGCCGGAGAGGTCATGGGGTAAGGTACTGGAGACGGCGAGGGAGGCGAAGAAGCTCGGGGAGGATGATCCGAGAAGGATTGTGCATTCGTTCAAAGTAGGGTTGGCTCTGACGTTGGTGTCTCTTTTTTGTTACTGTCGACCGCTTTATGATGGCTTCGGTGACGATGCAATGTGGGCTGTCTTGACCGTGGTCGTTGTCTTTGAGTTCTCGGTTGGAGCAACCCTAGGGAAGGGTATAAATAGGATGTTGGCAACGTTACTAGCTGGTGCTCTAGCTGTTGGAGTTCATCACATATCAACTCTCTGGGGAGGAGAAATCGGGGAGCCCATATTGATTGCATTTTTCGTCTTCGTTGTAGCTGCAAGTGTGACCTTCATGAGATTCTTCCCCGCATTGAAGTCAAGGTATGACTACGGGCTGTTGATATTCACACTGACCTTCAGCTTGGTTTCCGTATCTGGCTACCGAGAAACTCAGGTACTAGACATGGCACACAAGAGGCTATCAACGATTGCGATAGGAAGCTGTACTTCTATTATGGTTTGTATTTGCATCTGCCCTGTGTGGATTGGAGTTGATCTCCACAATTTGGTTGCTGGTAACATGGAAAAGCTTGGGGTCTTTATGGAAGGATTTGGATTTGAATACTTTGACATCAAAGGGAATGGGTTGTCATTGAGTGATAATCAATCTTTCCTTCAGCAATATAAAAGTGTTCTTTTATCAAAAAGCCTTGAAGAAACCATGGCTAACTTGGCAAGATGGGAACCAGGTCATTATGGCGGGTTCAAGTTTGGCCACCCATGGGAGAAGTATTTGAATGTTGGAAGCCAAAATCGGCAATGTGCTTATAAAATTGAAGCTCTGAACACTTACCTGAACACTGATATCCAAGTGCCCGCTGAAATTCGAAGCAAAATTCAAGAACCATGCATAAATATTTGCACTGAATCCGGAAAAGCATTGAAGGAATTAGCAGCAGCCCTCAAGAAAATGACTGGGTCATCATCAGCTGATTCCCACATTGCATGCTCAAAAGCAGCAGTTGAGAGCCTCAAGTTGTCACTCAAAAGAGGCATATGGAAAGATGCTAATCTGCTGGAAACAATACCATCTGCTGCGGTGGCGTCACTTCTTATTGAAGTCGTAGCTTGTGTTGAGAAGATTGCTGAAGCAGTTCACGAACTAGCATCCGTCGCACATTTCAAGACTGAACAACCACAATTACTTCAGGAGCCAGTGCTTTCTGAAGAATATCATGTTGCTATTACAATTGATCGTAATTCAACTGAGGGGCTACCCAAAAATGGAAGTTCACTTGGCATCACTGCTAATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

468

Amino Acids

51.06

Weight (kDa)

6.61

Isoelectric Point (pI)

40.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	38 - 379	1.4e-136	Aluminium activated malate transporter
FUSC_2	PF13515	75 - 202	8.2e-10	Fusaric acid resistance protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca	FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica	MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica	Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis	pycom03g10930 pycom11g14730
rosa_chinensis	RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata	RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora	Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii	Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa	Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha	Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana	Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	915
AasI	GACNNNNNNGTC	1 cut(s)	178
AccB1I	GGYRCC	1 cut(s)	61
AccB7I	CCANNNNNTGG	1 cut(s)	652
AccI	GTMKAC	1 cut(s)	199
AccIII	TCCGGA	1 cut(s)	1016
AciI	CCGC	9 cut(s)	18, 21, 46, 59, 203, 453, 846, 963, 1184
AclI	AACGTT	1 cut(s)	317
AclWI	GGATC	1 cut(s)	122
AcoI	YGGCCR	1 cut(s)	859
AcsI	RAATTY	2 cut(s)	969, 981
AcuI	CTGAAG	6 cut(s)	74, 487, 746, 1254, 1277, 1332
AcyI	GRCGYC	1 cut(s)	1190
AfaI	GTAC	3 cut(s)	87, 543, 592
AfiI	CCNNNNNNNGG	5 cut(s)	40, 292, 652, 868, 1370
AjnI	CCWGG	1 cut(s)	832
Alw21I	GWGCWC	1 cut(s)	334
Alw26I	GTCTC	2 cut(s)	86, 186
AlwI	GGATC	1 cut(s)	122
AlwNI	CAGNNNCTG	1 cut(s)	15
Ama87I	CYCGRG	1 cut(s)	116
Aor13HI	TCCGGA	1 cut(s)	1016
AoxI	GGCC	2 cut(s)	26, 859
ApeKI	GCWGC	7 cut(s)	12, 15, 422, 1040, 1043, 1103, 1181
ApoI	RAATTY	2 cut(s)	969, 981
Asp700I	GAANNNNTTC	1 cut(s)	1239
AspA2I	CCTAGG	1 cut(s)	286
AspS9I	GGNCC	1 cut(s)	26
AsuHPI	GGTGA	1 cut(s)	233
AsuII	TTCGAA	1 cut(s)	973
AvaI	CYCGRG	1 cut(s)	116
AvrII	CCTAGG	1 cut(s)	286
BaeGI	GKGCMC	1 cut(s)	963
BalI	TGGCCA	1 cut(s)	861
BanI	GGYRCC	1 cut(s)	61
BanII	GRGCYC	1 cut(s)	390
BbsI	GAAGAC	1 cut(s)	403
Bbv12I	GWGCWC	1 cut(s)	334
BbvI	GCAGC	7 cut(s)	2, 24, 409, 1052, 1055, 1115, 1168
BccI	CCATC	3 cut(s)	206, 819, 1183
BceAI	ACGGC	1 cut(s)	111
BciT130I	CCWGG	1 cut(s)	834
BcoDI	GTCTC	2 cut(s)	86, 186
BfaI	CTAG	5 cut(s)	287, 323, 335, 545, 1250
BisI	GCNGC	8 cut(s)	13, 16, 19, 423, 1041, 1044, 1104, 1182
BlnI	CCTAGG	1 cut(s)	286
BlsI	GCNGC	8 cut(s)	14, 17, 20, 424, 1042, 1045, 1105, 1183
Bme1390I	CCNGG	1 cut(s)	834
BmeT110I	CYCGRG	1 cut(s)	116
BmgT120I	GGNCC	1 cut(s)	26
BmiI	GGNNCC	4 cut(s)	63, 387, 831, 1299
BmrFI	CCNGG	1 cut(s)	834
BmrI	ACTGGG	1 cut(s)	1071
BmsI	GCATC	5 cut(s)	217, 624, 1141, 1262, 1395
BmuI	ACTGGG	1 cut(s)	1071
BoxI	GACNNNNGTC	1 cut(s)	251
BpiI	GAAGAC	1 cut(s)	403
BplI	GAGNNNNNCTC	2 cut(s)	627, 659
BpmI	CTGGAG	1 cut(s)	110
Bpu14I	TTCGAA	1 cut(s)	973
BpuEI	CTTGAG	2 cut(s)	1034, 1103
BsaBI	GATNNNNATC	1 cut(s)	1155
BsaHI	GRCGYC	1 cut(s)	1190
BsaJI	CCNNGG	4 cut(s)	249, 286, 807, 866
BsaWI	WCCGGW	1 cut(s)	1016
Bsc4I	CCNNNNNNNGG	5 cut(s)	40, 292, 652, 868, 1370
Bse1I	ACTGG	3 cut(s)	93, 1066, 1301
Bse3DI	GCAATG	3 cut(s)	237, 911, 1086
Bse8I	GATNNNNATC	1 cut(s)	1155
BseAI	TCCGGA	1 cut(s)	1016
BseBI	CCWGG	1 cut(s)	834
BseDI	CCNNGG	4 cut(s)	249, 286, 807, 866
BseGI	GGATG	3 cut(s)	130, 312, 1253
BseJI	GATNNNNATC	1 cut(s)	1155
BseLI	CCNNNNNNNGG	5 cut(s)	40, 292, 652, 868, 1370
BseMI	GCAATG	3 cut(s)	237, 911, 1086
BseMII	CTCAG	2 cut(s)	551, 1344
BseNI	ACTGG	3 cut(s)	93, 1066, 1301
BseRI	GAGGAG	1 cut(s)	387
BseSI	GKGCMC	1 cut(s)	963
BseXI	GCAGC	7 cut(s)	2, 24, 409, 1052, 1055, 1115, 1168
Bsh1285I	CGRYCG	1 cut(s)	203
BshFI	GGCC	2 cut(s)	28, 861
BshNI	GGYRCC	1 cut(s)	61
BsiEI	CGRYCG	1 cut(s)	203
BsiHKAI	GWGCWC	1 cut(s)	334
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	2 cut(s)	65, 1017
BslI	CCNNNNNNNGG	5 cut(s)	40, 292, 652, 868, 1370
BsmAI	GTCTC	2 cut(s)	86, 186
BsmBI	CGTCTC	1 cut(s)	86
BsmI	GAATGC	1 cut(s)	145
BsnI	GGCC	2 cut(s)	28, 861
BsoBI	CYCGRG	1 cut(s)	116
Bsp119I	TTCGAA	1 cut(s)	973
Bsp1286I	GDGCHC	3 cut(s)	334, 390, 963
Bsp13I	TCCGGA	1 cut(s)	1016
Bsp143I	GATC	3 cut(s)	127, 640, 1339
Bsp19I	CCATGG	2 cut(s)	807, 866
BspACI	CCGC	9 cut(s)	18, 21, 46, 59, 203, 453, 846, 963, 1184
BspANI	GGCC	2 cut(s)	28, 861
BspCNI	CTCAG	2 cut(s)	550, 1345
BspEI	TCCGGA	1 cut(s)	1016
BspHI	TCATGA	1 cut(s)	438
BspLI	GGNNCC	4 cut(s)	63, 387, 831, 1299
BspPI	GGATC	1 cut(s)	122
BspT104I	TTCGAA	1 cut(s)	973
BspT107I	GGYRCC	1 cut(s)	61
BsrDI	GCAATG	3 cut(s)	237, 911, 1086
BsrI	ACTGG	3 cut(s)	93, 1066, 1301
BssECI	CCNNGG	4 cut(s)	249, 286, 807, 866
BssMI	GATC	3 cut(s)	127, 640, 1339
BssNI	GRCGYC	1 cut(s)	1190
BssT1I	CCWWGG	3 cut(s)	286, 807, 866
Bst2UI	CCWGG	1 cut(s)	834
Bst4CI	ACNGT	2 cut(s)	197, 250
BstACI	GRCGYC	1 cut(s)	1190
BstBI	TTCGAA	1 cut(s)	973
BstC8I	GCNNGC	2 cut(s)	963, 1093
BstDEI	CTNAG	2 cut(s)	537, 1353
BstDSI	CCRYGG	3 cut(s)	249, 807, 866
BstENI	CCTNNNNNAGG	1 cut(s)	290
BstF5I	GGATG	3 cut(s)	130, 312, 1253
BstKTI	GATC	3 cut(s)	130, 643, 1342
BstMAI	GTCTC	2 cut(s)	86, 186
BstMBI	GATC	3 cut(s)	127, 640, 1339
BstMCI	CGRYCG	1 cut(s)	203
BstMWI	GCNNNNNNNGC	6 cut(s)	18, 104, 236, 818, 1187, 1259
BstNI	CCWGG	1 cut(s)	834
BstNSI	RCATGY	1 cut(s)	1095
BstPAI	GACNNNNGTC	1 cut(s)	251
BstSCI	CCNGG	1 cut(s)	832
BstSLI	GKGCMC	1 cut(s)	963
BstV1I	GCAGC	7 cut(s)	2, 24, 409, 1052, 1055, 1115, 1168
BstV2I	GAAGAC	1 cut(s)	403
BsuRI	GGCC	2 cut(s)	28, 861
BtgI	CCRYGG	3 cut(s)	249, 807, 866
BtsCI	GGATG	3 cut(s)	130, 312, 1253
BtsI	GCAGTG	1 cut(s)	1389
BtsIMutI	CAGTG	5 cut(s)	494, 945, 1008, 1308, 1389
Cac8I	GCNNGC	2 cut(s)	963, 1093
CaiI	CAGNNNCTG	1 cut(s)	15
CciI	TCATGA	1 cut(s)	438
Cfr13I	GGNCC	1 cut(s)	26
CseI	GACGC	1 cut(s)	1179
CsiI	ACCWGGT	1 cut(s)	832
Csp6I	GTAC	3 cut(s)	86, 542, 591
CviAII	CATG	9 cut(s)	75, 439, 550, 667, 808, 867, 993, 1092, 1322
CviQI	GTAC	3 cut(s)	86, 542, 591
DdeI	CTNAG	2 cut(s)	537, 1353
DpnI	GATC	3 cut(s)	129, 642, 1341
DpnII	GATC	3 cut(s)	127, 640, 1339
DrdI	GACNNNNNNGTC	1 cut(s)	178
DseDI	GACNNNNNNGTC	1 cut(s)	178
EaeI	YGGCCR	1 cut(s)	859
EciI	GGCGGA	1 cut(s)	36
Eco130I	CCWWGG	3 cut(s)	286, 807, 866
Eco24I	GRGCYC	1 cut(s)	390
Eco32I	GATATC	1 cut(s)	952
Eco57I	CTGAAG	6 cut(s)	74, 487, 746, 1254, 1277, 1332
Eco88I	CYCGRG	1 cut(s)	116
EcoNI	CCTNNNNNAGG	1 cut(s)	290
EcoO109I	RGGNCCY	1 cut(s)	26
EcoRII	CCWGG	1 cut(s)	832
EcoRV	GATATC	1 cut(s)	952
EcoT14I	CCWWGG	3 cut(s)	286, 807, 866
EcoT22I	ATGCAT	1 cut(s)	998
EcoT38I	GRGCYC	1 cut(s)	390
ErhI	CCWWGG	3 cut(s)	286, 807, 866
Esp3I	CGTCTC	1 cut(s)	86
FaeI	CATG	9 cut(s)	78, 442, 553, 670, 811, 870, 996, 1095, 1325
FalI	AAGNNNNNCTT	2 cut(s)	577, 609
FatI	CATG	9 cut(s)	74, 438, 549, 666, 807, 866, 992, 1091, 1321
FauI	CCCGC	3 cut(s)	460, 839, 970
FauNDI	CATATG	1 cut(s)	1142
FblI	GTMKAC	1 cut(s)	199
Fnu4HI	GCNGC	8 cut(s)	13, 16, 19, 423, 1041, 1044, 1104, 1182
FokI	GGATG	3 cut(s)	137, 319, 1240
FriOI	GRGCYC	1 cut(s)	390
Fsp4HI	GCNGC	8 cut(s)	13, 16, 19, 423, 1041, 1044, 1104, 1182
FspBI	CTAG	5 cut(s)	287, 323, 335, 545, 1250
GluI	GCNGC	8 cut(s)	13, 16, 19, 423, 1041, 1044, 1104, 1182
GsuI	CTGGAG	1 cut(s)	110
HaeIII	GGCC	2 cut(s)	28, 861
HapII	CCGG	2 cut(s)	65, 1017
HgaI	GACGC	1 cut(s)	1179
Hin1I	GRCGYC	1 cut(s)	1190
Hin1II	CATG	9 cut(s)	78, 442, 553, 670, 811, 870, 996, 1095, 1325
HincII	GTYRAC	1 cut(s)	200
HindII	GTYRAC	1 cut(s)	200
HindIII	AAGCTT	1 cut(s)	674
HinfI	GANTC	3 cut(s)	444, 1013, 1079
HpaII	CCGG	2 cut(s)	65, 1017
HphI	GGTGA	1 cut(s)	233
Hpy166II	GTNNAC	3 cut(s)	200, 1243, 1379
Hpy188I	TCNGA	4 cut(s)	132, 171, 930, 1312
Hpy188III	TCNNGA	8 cut(s)	244, 439, 986, 1017, 1051, 1244, 1270, 1295
Hpy8I	GTNNAC	3 cut(s)	200, 1243, 1379
Hpy99I	CGWCG	1 cut(s)	1262
HpyAV	CCTTC	8 cut(s)	49, 129, 286, 445, 511, 686, 770, 1024
HpyCH4III	ACNGT	2 cut(s)	197, 250
HpyCH4IV	ACGT	2 cut(s)	173, 317
HpyCH4V	TGCA	8 cut(s)	145, 230, 401, 425, 615, 996, 1008, 1091
HpyF10VI	GCNNNNNNNGC	6 cut(s)	18, 104, 236, 818, 1187, 1259
HpyF3I	CTNAG	2 cut(s)	537, 1353
HpySE526I	ACGT	2 cut(s)	173, 317
Hsp92I	GRCGYC	1 cut(s)	1190
Hsp92II	CATG	9 cut(s)	78, 442, 553, 670, 811, 870, 996, 1095, 1325
Kpn2I	TCCGGA	1 cut(s)	1016
Kzo9I	GATC	3 cut(s)	127, 640, 1339
LmnI	GCTCC	3 cut(s)	278, 385, 1297
Lsp1109I	GCAGC	7 cut(s)	2, 24, 409, 1052, 1055, 1115, 1168
LweI	GCATC	5 cut(s)	217, 624, 1141, 1262, 1395
MabI	ACCWGGT	1 cut(s)	832
MaeI	CTAG	5 cut(s)	287, 323, 335, 545, 1250
MaeII	ACGT	2 cut(s)	173, 317
MaeIII	GTNAC	7 cut(s)	191, 221, 318, 430, 662, 1125, 1191
MalI	GATC	3 cut(s)	129, 642, 1341
MboI	GATC	3 cut(s)	127, 640, 1339
MboII	GAAGA	6 cut(s)	121, 403, 439, 812, 1237, 1325
MfeI	CAATTG	1 cut(s)	1335
MhlI	GDGCHC	3 cut(s)	334, 390, 963
MlsI	TGGCCA	1 cut(s)	861
MluCI	AATT	8 cut(s)	649, 918, 969, 981, 1034, 1286, 1335, 1345
MluNI	TGGCCA	1 cut(s)	861
MmeI	TCCRAC	3 cut(s)	256, 322, 868
Mox20I	TGGCCA	1 cut(s)	861
Mph1103I	ATGCAT	1 cut(s)	998
MroI	TCCGGA	1 cut(s)	1016
MroXI	GAANNNNTTC	1 cut(s)	1239
MscI	TGGCCA	1 cut(s)	861
MseI	TTAA	1 cut(s)	1402
Msp20I	TGGCCA	1 cut(s)	861
MspA1I	CMGCKG	3 cut(s)	15, 965, 1076
MspI	CCGG	2 cut(s)	65, 1017
MspR9I	CCNGG	1 cut(s)	834
MunI	CAATTG	1 cut(s)	1335
Mva1269I	GAATGC	1 cut(s)	145
MvaI	CCWGG	1 cut(s)	834
MwoI	GCNNNNNNNGC	6 cut(s)	18, 104, 236, 818, 1187, 1259
NcoI	CCATGG	2 cut(s)	807, 866
NdeI	CATATG	1 cut(s)	1142
NdeII	GATC	3 cut(s)	127, 640, 1339
NlaIII	CATG	9 cut(s)	78, 442, 553, 670, 811, 870, 996, 1095, 1325
NlaIV	GGNNCC	4 cut(s)	63, 387, 831, 1299
NmuCI	GTSAC	4 cut(s)	221, 430, 1125, 1191
NsiI	ATGCAT	1 cut(s)	998
NspI	RCATGY	1 cut(s)	1095
NspV	TTCGAA	1 cut(s)	973
PaeI	GCATGC	1 cut(s)	1095
PagI	TCATGA	1 cut(s)	438
PctI	GAATGC	1 cut(s)	145
PdmI	GAANNNNTTC	1 cut(s)	1239
PfeI	GAWTC	3 cut(s)	444, 1013, 1079
PflFI	GACNNNGTC	1 cut(s)	1063
PflMI	CCANNNNNTGG	1 cut(s)	652
PkrI	GCNGC	8 cut(s)	14, 17, 20, 424, 1042, 1045, 1105, 1183
PshAI	GACNNNNGTC	1 cut(s)	251
PsiI	TTATAA	1 cut(s)	915
Psp1406I	AACGTT	1 cut(s)	317
Psp6I	CCWGG	1 cut(s)	832
PspGI	CCWGG	1 cut(s)	832
PspN4I	GGNNCC	4 cut(s)	63, 387, 831, 1299
PspPI	GGNCC	1 cut(s)	26
PstNI	CAGNNNCTG	1 cut(s)	15
PsyI	GACNNNGTC	1 cut(s)	1063
PvuII	CAGCTG	2 cut(s)	15, 1076
RsaI	GTAC	3 cut(s)	87, 543, 592
RsaNI	GTAC	3 cut(s)	86, 542, 591
SalI	GTCGAC	1 cut(s)	198
SaqAI	TTAA	1 cut(s)	1402
SatI	GCNGC	8 cut(s)	13, 16, 19, 423, 1041, 1044, 1104, 1182
Sau3AI	GATC	3 cut(s)	127, 640, 1339
Sau96I	GGNCC	1 cut(s)	26
ScrFI	CCNGG	1 cut(s)	834
SduI	GDGCHC	3 cut(s)	334, 390, 963
SexAI	ACCWGGT	1 cut(s)	832
SfaNI	GCATC	5 cut(s)	217, 624, 1141, 1262, 1395
SfuI	TTCGAA	1 cut(s)	973
SmlI	CTYRAG	2 cut(s)	1049, 1118
SmoI	CTYRAG	2 cut(s)	1049, 1118
SphI	GCATGC	1 cut(s)	1095
Sse9I	AATT	8 cut(s)	649, 918, 969, 981, 1034, 1286, 1335, 1345
SsiI	CCGC	9 cut(s)	18, 21, 46, 59, 203, 453, 846, 963, 1184
SspI	AATATT	1 cut(s)	1003
SspMI	CTAG	5 cut(s)	287, 323, 335, 545, 1250
StyD4I	CCNGG	1 cut(s)	832
StyI	CCWWGG	3 cut(s)	286, 807, 866
TaaI	ACNGT	2 cut(s)	197, 250
TaiI	ACGT	2 cut(s)	176, 320
TaqI	TCGA	2 cut(s)	199, 973
TasI	AATT	8 cut(s)	649, 918, 969, 981, 1034, 1286, 1335, 1345
TatI	WGTACW	1 cut(s)	590
TauI	GCSGC	1 cut(s)	21
TfiI	GAWTC	3 cut(s)	444, 1013, 1079
Tru1I	TTAA	1 cut(s)	1402
Tru9I	TTAA	1 cut(s)	1402
TscAI	CASTG	5 cut(s)	501, 952, 1015, 1308, 1396
TseFI	GTSAC	4 cut(s)	221, 430, 1125, 1191
TseI	GCWGC	7 cut(s)	12, 15, 422, 1040, 1043, 1103, 1181
Tsp45I	GTSAC	4 cut(s)	221, 430, 1125, 1191
TspDTI	ATGAA	2 cut(s)	338, 427
TspGWI	ACGGA	3 cut(s)	23, 505, 1246
TspRI	CASTG	5 cut(s)	501, 952, 1015, 1308, 1396
Tth111I	GACNNNGTC	1 cut(s)	1063
Van91I	CCANNNNNTGG	1 cut(s)	652
XagI	CCTNNNNNAGG	1 cut(s)	290
XapI	RAATTY	2 cut(s)	969, 981
XceI	RCATGY	1 cut(s)	1095
XcmI	CCANNNNNNNNNTGG	1 cut(s)	814
XmaJI	CCTAGG	1 cut(s)	286
XmiI	GTMKAC	1 cut(s)	199
XmnI	GAANNNNTTC	1 cut(s)	1239
XspI	CTAG	5 cut(s)	287, 323, 335, 545, 1250
Zsp2I	ATGCAT	1 cut(s)	998

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.