Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000374

Physical Location & Seq

Genomic Coordinates Reverse (-)

48339066 .. 48341874

Gene Structure 2809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00033440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1257 bp

ATGGTCAAACACTTACCCCTGCGCAAGTACTGCTTGGAGAAGGATTTTCTTCAATTGGAAAGTCTGAGTGAAGCTCAGCTAGCTGATGCACCAGCGGAGGGAATGCTGATGGCTGTATTGGTGCTCGGCTCGCAGGCCCTCCTCTGCATATGCGGTCTTGCTGCTATGTGGGCTATCCTGACTGTTGTGGTCGTTTTTGAATTTTCTGTTGGAGGGACGATAGGACGAGGTTTGAATAGAATGATGTCAACTGTTGTAGCTGCTGCTCTTGGCATTGGAGCTCATCGATTAGCAACTCTCACAGGAAATCAAGGAGAGCCTATACTTATTGCTTTCTTTGTCTTCGTAGAAGCTGGACTAGTGACATTCTTCAGATTCATTCCCCAAATGAAGGCAAGATACGATTATGGGCTGCTGATATTCAACGTGACGTTCTGCCTGATATCGGTGTCTGGATATCGCGACAAAGAGGTCATACAAATGGGATTCGAAAGGGTATGTACCATCACCATTGGAGGCTGTATCGCTGTTGCTGTCTGTGTTTTCATTCGTCCTGTATGGATAGGGGTGGAGCTTCACAATCGGATTTCTACCAACATGGAAAAGCTGGCCAATTTCTTAGAAGTATCTGAAAATGAGCAGACCAGACAGAAGTCATCGTTTCTTGAGGGATATAAAAGTGTTCTAACTTCAAAAGGCAGTGAAAACACTATGGCTAATTTGGCAAGATGGGAACCGGGCCATGGGAATTTCAGATTTCGTCATCCATGGGAACAATACTTGAAAGTTGGAACCCTTACTCGCCAATGTGCGTTCAAAATTGAAGCTCTCAACAACTACCTTACCTCTGAAACCCAAACACCTCAGGAAGTTAAAAGCATAATACAAGGGCCAAGCGTGGTTATAAGCTCAGAGTGTGGGAAAGCATTGAAGCAGTTAGCAACCTCAATGAGGAAAATGACCAAATCATCCTCAAACGATCCTCACATTGCAAAGTCAAAAGATGCCGCTGAAGAACTCAAAGCTATTATAAGATCAAGCTTGTGTAAACAGCCAGCTGATTCGCTGCATATAATACAAGAAGGTGCAGTGGCTTCACTACTCTTTGAAATTATCAGATGTACAGAGAAAATTGCAGACGCTGTACATAAACTAGCATCCCAAGCACATTTTAAGGATGTAAAGCCTACAGTGAAACCGGACCAGGAAAACTCCGTGAATGATGGGCCACACCATGTTATTACGATTGAGGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

418

Amino Acids

46.04

Weight (kDa)

8.23

Isoelectric Point (pI)

33.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	44 - 346	3.7e-109	Aluminium activated malate transporter
FUSC_2	PF13515	55 - 179	1.4e-08	Fusaric acid resistance protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca	FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica	MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica	Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis	pycom03g10930 pycom11g14730
rosa_chinensis	RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata	RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora	Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii	Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa	Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha	Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana	Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	905, 1031
AasI	GACNNNNNNGTC	1 cut(s)	470
Acc16I	TGCGCA	1 cut(s)	23
AccII	CGCG	1 cut(s)	462
AciI	CCGC	3 cut(s)	95, 153, 1008
AclWI	GGATC	1 cut(s)	974
AcoI	YGGCCR	1 cut(s)	609
AcsI	RAATTY	2 cut(s)	200, 748
AcuI	CTGAAG	2 cut(s)	355, 1032
AfaI	GTAC	4 cut(s)	29, 502, 1123, 1146
AfiI	CCNNNNNNNGG	5 cut(s)	98, 391, 445, 743, 951
AhlI	ACTAGT	1 cut(s)	358
AjnI	CCWGG	1 cut(s)	1203
AjuI	GAANNNNNNNTTGG	2 cut(s)	192, 224
Alw21I	GWGCWC	2 cut(s)	126, 283
AlwI	GGATC	1 cut(s)	974
AlwNI	CAGNNNCTG	1 cut(s)	1142
AoxI	GGCC	5 cut(s)	135, 609, 739, 890, 1226
ApeKI	GCWGC	5 cut(s)	161, 260, 263, 412, 1066
ApoI	RAATTY	2 cut(s)	200, 748
AspLEI	GCGC	1 cut(s)	24
AspS9I	GGNCC	5 cut(s)	136, 739, 890, 1201, 1226
AsuC2I	CCSGG	1 cut(s)	738
AsuHPI	GGTGA	1 cut(s)	499
AsuII	TTCGAA	1 cut(s)	489
AsuNHI	GCTAGC	1 cut(s)	79
AvaII	GGWCC	1 cut(s)	1201
AxyI	CCTNAGG	1 cut(s)	864
BalI	TGGCCA	1 cut(s)	611
BanII	GRGCYC	1 cut(s)	283
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
BbsI	GAAGAC	1 cut(s)	334
Bbv12I	GWGCWC	2 cut(s)	126, 283
BbvI	GCAGC	5 cut(s)	148, 247, 250, 399, 1053
BccI	CCATC	4 cut(s)	103, 512, 723, 1217
BciT130I	CCWGG	1 cut(s)	1205
BcnI	CCSGG	1 cut(s)	738
BcuI	ACTAGT	1 cut(s)	358
BfaI	CTAG	3 cut(s)	80, 359, 1154
BfmI	CTRYAG	1 cut(s)	1188
BisI	GCNGC	6 cut(s)	162, 261, 264, 413, 1008, 1067
BlpI	GCTNAGC	1 cut(s)	75
BlsI	GCNGC	6 cut(s)	163, 262, 265, 414, 1009, 1068
BmcAI	AGTACT	1 cut(s)	29
Bme1390I	CCNGG	2 cut(s)	738, 1205
Bme18I	GGWCC	1 cut(s)	1201
BmgT120I	GGNCC	5 cut(s)	136, 739, 890, 1201, 1226
BmiI	GGNNCC	2 cut(s)	735, 793
BmrFI	CCNGG	2 cut(s)	738, 1205
BmsI	GCATC	3 cut(s)	76, 994, 1166
BmtI	GCTAGC	1 cut(s)	83
BoxI	GACNNNNGTC	1 cut(s)	652
BpiI	GAAGAC	1 cut(s)	334
BplI	GAGNNNNNCTC	2 cut(s)	58, 90
Bpu1102I	GCTNAGC	1 cut(s)	75
Bpu14I	TTCGAA	1 cut(s)	489
BpuEI	CTTGAG	1 cut(s)	686
BpuMI	CCSGG	1 cut(s)	738
Bsa29I	ATCGAT	1 cut(s)	286
BsaJI	CCNNGG	2 cut(s)	742, 767
BsaWI	WCCGGW	1 cut(s)	1198
Bsc4I	CCNNNNNNNGG	5 cut(s)	98, 391, 445, 743, 951
Bse21I	CCTNAGG	1 cut(s)	864
Bse3DI	GCAATG	1 cut(s)	987
BseBI	CCWGG	1 cut(s)	1205
BseCI	ATCGAT	1 cut(s)	286
BseDI	CCNNGG	2 cut(s)	742, 767
BseGI	GGATG	4 cut(s)	763, 968, 1157, 1183
BseLI	CCNNNNNNNGG	5 cut(s)	98, 391, 445, 743, 951
BseMI	GCAATG	1 cut(s)	987
BseMII	CTCAG	4 cut(s)	56, 89, 878, 924
BseRI	GAGGAG	1 cut(s)	131
BseXI	GCAGC	5 cut(s)	148, 247, 250, 399, 1053
BsgI	GTGCAG	1 cut(s)	1107
Bsh1236I	CGCG	1 cut(s)	462
BshFI	GGCC	5 cut(s)	137, 611, 741, 892, 1228
BshVI	ATCGAT	1 cut(s)	286
BsiHKAI	GWGCWC	2 cut(s)	126, 283
BsiSI	CCGG	2 cut(s)	737, 1199
BslFI	GGGAC	1 cut(s)	229
BslI	CCNNNNNNNGG	5 cut(s)	98, 391, 445, 743, 951
BsmFI	GGGAC	1 cut(s)	229
BsmI	GAATGC	1 cut(s)	108
BsnI	GGCC	5 cut(s)	137, 611, 741, 892, 1228
Bsp119I	TTCGAA	1 cut(s)	489
Bsp1286I	GDGCHC	2 cut(s)	126, 283
Bsp1407I	TGTACA	2 cut(s)	1121, 1144
Bsp143I	GATC	2 cut(s)	979, 1034
Bsp1720I	GCTNAGC	1 cut(s)	75
Bsp19I	CCATGG	2 cut(s)	742, 767
Bsp68I	TCGCGA	1 cut(s)	462
BspACI	CCGC	3 cut(s)	95, 153, 1008
BspANI	GGCC	5 cut(s)	137, 611, 741, 892, 1228
BspCNI	CTCAG	4 cut(s)	57, 88, 877, 923
BspDI	ATCGAT	1 cut(s)	286
BspFNI	CGCG	1 cut(s)	462
BspLI	GGNNCC	2 cut(s)	735, 793
BspOI	GCTAGC	1 cut(s)	83
BspPI	GGATC	1 cut(s)	974
BspT104I	TTCGAA	1 cut(s)	489
BsrDI	GCAATG	1 cut(s)	987
BsrGI	TGTACA	2 cut(s)	1121, 1144
BssECI	CCNNGG	2 cut(s)	742, 767
BssMI	GATC	2 cut(s)	979, 1034
BssT1I	CCWWGG	2 cut(s)	742, 767
Bst2UI	CCWGG	1 cut(s)	1205
Bst4CI	ACNGT	3 cut(s)	184, 253, 1192
BstAPI	GCANNNNNTGC	1 cut(s)	30
BstAUI	TGTACA	2 cut(s)	1121, 1144
BstBI	TTCGAA	1 cut(s)	489
BstC8I	GCNNGC	5 cut(s)	81, 131, 135, 609, 1056
BstDEI	CTNAG	5 cut(s)	65, 75, 619, 864, 910
BstDSI	CCRYGG	2 cut(s)	742, 767
BstENI	CCTNNNNNAGG	1 cut(s)	949
BstF5I	GGATG	4 cut(s)	763, 968, 1157, 1183
BstFNI	CGCG	1 cut(s)	462
BstHHI	GCGC	1 cut(s)	24
BstKTI	GATC	2 cut(s)	982, 1037
BstMBI	GATC	2 cut(s)	979, 1034
BstMWI	GCNNNNNNNGC	6 cut(s)	30, 80, 130, 170, 722, 1163
BstNI	CCWGG	1 cut(s)	1205
BstPAI	GACNNNNGTC	1 cut(s)	652
BstSCI	CCNGG	2 cut(s)	736, 1203
BstSFI	CTRYAG	1 cut(s)	1188
BstUI	CGCG	1 cut(s)	462
BstV1I	GCAGC	5 cut(s)	148, 247, 250, 399, 1053
BstV2I	GAAGAC	1 cut(s)	334
Bsu15I	ATCGAT	1 cut(s)	286
Bsu36I	CCTNAGG	1 cut(s)	864
BsuRI	GGCC	5 cut(s)	137, 611, 741, 892, 1228
BsuTUI	ATCGAT	1 cut(s)	286
BtgI	CCRYGG	2 cut(s)	742, 767
BtsCI	GGATG	4 cut(s)	763, 968, 1157, 1183
BtsI	GCAGTG	2 cut(s)	706, 1095
BtsIMutI	CAGTG	3 cut(s)	706, 1095, 1197
BtuMI	TCGCGA	1 cut(s)	462
Cac8I	GCNNGC	5 cut(s)	81, 131, 135, 609, 1056
CaiI	CAGNNNCTG	1 cut(s)	1142
CfoI	GCGC	1 cut(s)	24
Cfr13I	GGNCC	5 cut(s)	136, 739, 890, 1201, 1226
ClaI	ATCGAT	1 cut(s)	286
CseI	GACGC	1 cut(s)	1148
Csp6I	GTAC	4 cut(s)	28, 501, 1122, 1145
CviAII	CATG	4 cut(s)	598, 743, 768, 1235
CviQI	GTAC	4 cut(s)	28, 501, 1122, 1145
DdeI	CTNAG	5 cut(s)	65, 75, 619, 864, 910
DpnI	GATC	2 cut(s)	981, 1036
DpnII	GATC	2 cut(s)	979, 1034
DrdI	GACNNNNNNGTC	1 cut(s)	470
DseDI	GACNNNNNNGTC	1 cut(s)	470
EaeI	YGGCCR	1 cut(s)	609
Ecl136II	GAGCTC	1 cut(s)	281
Eco130I	CCWWGG	2 cut(s)	742, 767
Eco24I	GRGCYC	1 cut(s)	283
Eco32I	GATATC	2 cut(s)	444, 458
Eco47I	GGWCC	1 cut(s)	1201
Eco53kI	GAGCTC	1 cut(s)	281
Eco57I	CTGAAG	2 cut(s)	355, 1032
Eco81I	CCTNAGG	1 cut(s)	864
EcoICRI	GAGCTC	1 cut(s)	281
EcoNI	CCTNNNNNAGG	1 cut(s)	949
EcoO109I	RGGNCCY	1 cut(s)	136
EcoRII	CCWGG	1 cut(s)	1203
EcoRV	GATATC	2 cut(s)	444, 458
EcoT14I	CCWWGG	2 cut(s)	742, 767
EcoT38I	GRGCYC	1 cut(s)	283
ErhI	CCWWGG	2 cut(s)	742, 767
FaeI	CATG	4 cut(s)	601, 746, 771, 1238
FalI	AAGNNNNNCTT	2 cut(s)	17, 49
FaqI	GGGAC	1 cut(s)	229
FatI	CATG	4 cut(s)	597, 742, 767, 1234
FauNDI	CATATG	1 cut(s)	149
Fnu4HI	GCNGC	6 cut(s)	162, 261, 264, 413, 1008, 1067
FokI	GGATG	4 cut(s)	750, 955, 1144, 1190
FriOI	GRGCYC	1 cut(s)	283
Fsp4HI	GCNGC	6 cut(s)	162, 261, 264, 413, 1008, 1067
FspBI	CTAG	3 cut(s)	80, 359, 1154
FspI	TGCGCA	1 cut(s)	23
GlaI	GCGC	1 cut(s)	23
GluI	GCNGC	6 cut(s)	162, 261, 264, 413, 1008, 1067
HaeIII	GGCC	5 cut(s)	137, 611, 741, 892, 1228
HapII	CCGG	2 cut(s)	737, 1199
HgaI	GACGC	1 cut(s)	1148
HhaI	GCGC	1 cut(s)	24
Hin1II	CATG	4 cut(s)	601, 746, 771, 1238
Hin6I	GCGC	1 cut(s)	22
HinP1I	GCGC	1 cut(s)	22
HincII	GTYRAC	1 cut(s)	249
HindII	GTYRAC	1 cut(s)	249
HindIII	AAGCTT	1 cut(s)	1039
HinfI	GANTC	3 cut(s)	375, 486, 1061
HpaII	CCGG	2 cut(s)	737, 1199
HphI	GGTGA	1 cut(s)	499
Hpy166II	GTNNAC	2 cut(s)	249, 1049
Hpy188I	TCNGA	8 cut(s)	66, 374, 585, 631, 755, 850, 913, 1118
Hpy188III	TCNNGA	5 cut(s)	178, 453, 461, 665, 866
Hpy8I	GTNNAC	2 cut(s)	249, 1049
HpyAV	CCTTC	3 cut(s)	34, 385, 1076
HpyCH4III	ACNGT	3 cut(s)	184, 253, 1192
HpyCH4IV	ACGT	2 cut(s)	426, 431
HpyCH4V	TGCA	6 cut(s)	89, 147, 992, 1069, 1088, 1136
HpyF10VI	GCNNNNNNNGC	6 cut(s)	30, 80, 130, 170, 722, 1163
HpyF3I	CTNAG	5 cut(s)	65, 75, 619, 864, 910
HpySE526I	ACGT	2 cut(s)	426, 431
Hsp92II	CATG	4 cut(s)	601, 746, 771, 1238
HspAI	GCGC	1 cut(s)	22
Kzo9I	GATC	2 cut(s)	979, 1034
LmnI	GCTCC	2 cut(s)	278, 571
Lsp1109I	GCAGC	5 cut(s)	148, 247, 250, 399, 1053
LweI	GCATC	3 cut(s)	76, 994, 1166
MaeI	CTAG	3 cut(s)	80, 359, 1154
MaeII	ACGT	2 cut(s)	426, 431
MaeIII	GTNAC	2 cut(s)	361, 427
MalI	GATC	2 cut(s)	981, 1036
MboI	GATC	2 cut(s)	979, 1034
MboII	GAAGA	4 cut(s)	41, 334, 361, 1025
MfeI	CAATTG	1 cut(s)	53
MhlI	GDGCHC	2 cut(s)	126, 283
MlsI	TGGCCA	1 cut(s)	611
MluCI	AATT	8 cut(s)	53, 200, 613, 718, 748, 819, 1110, 1131
MluNI	TGGCCA	1 cut(s)	611
MmeI	TCCRAC	2 cut(s)	190, 769
Mox20I	TGGCCA	1 cut(s)	611
MscI	TGGCCA	1 cut(s)	611
MseI	TTAA	3 cut(s)	873, 1173, 1255
MslI	CAYNNNNRTG	1 cut(s)	479
Msp20I	TGGCCA	1 cut(s)	611
MspA1I	CMGCKG	3 cut(s)	95, 1010, 1058
MspI	CCGG	2 cut(s)	737, 1199
MspR9I	CCNGG	2 cut(s)	738, 1205
MunI	CAATTG	1 cut(s)	53
Mva1269I	GAATGC	1 cut(s)	108
MvaI	CCWGG	1 cut(s)	1205
MvnI	CGCG	1 cut(s)	462
MwoI	GCNNNNNNNGC	6 cut(s)	30, 80, 130, 170, 722, 1163
NciI	CCSGG	1 cut(s)	738
NcoI	CCATGG	2 cut(s)	742, 767
NdeI	CATATG	1 cut(s)	149
NdeII	GATC	2 cut(s)	979, 1034
NheI	GCTAGC	1 cut(s)	79
NlaIII	CATG	4 cut(s)	601, 746, 771, 1238
NlaIV	GGNNCC	2 cut(s)	735, 793
NmeAIII	GCCGAG	1 cut(s)	105
NmuCI	GTSAC	2 cut(s)	361, 427
NruI	TCGCGA	1 cut(s)	462
NsbI	TGCGCA	1 cut(s)	23
NspV	TTCGAA	1 cut(s)	489
PctI	GAATGC	1 cut(s)	108
PfeI	GAWTC	3 cut(s)	375, 486, 1061
PkrI	GCNGC	6 cut(s)	163, 262, 265, 414, 1009, 1068
PshAI	GACNNNNGTC	1 cut(s)	652
PsiI	TTATAA	2 cut(s)	905, 1031
Psp124BI	GAGCTC	1 cut(s)	283
Psp6I	CCWGG	1 cut(s)	1203
PspGI	CCWGG	1 cut(s)	1203
PspN4I	GGNNCC	2 cut(s)	735, 793
PspPI	GGNCC	5 cut(s)	136, 739, 890, 1201, 1226
PstNI	CAGNNNCTG	1 cut(s)	1142
PvuII	CAGCTG	1 cut(s)	1058
RruI	TCGCGA	1 cut(s)	462
RsaI	GTAC	4 cut(s)	29, 502, 1123, 1146
RsaNI	GTAC	4 cut(s)	28, 501, 1122, 1145
RseI	CAYNNNNRTG	1 cut(s)	479
SacI	GAGCTC	1 cut(s)	283
SaqAI	TTAA	3 cut(s)	873, 1173, 1255
SatI	GCNGC	6 cut(s)	162, 261, 264, 413, 1008, 1067
Sau3AI	GATC	2 cut(s)	979, 1034
Sau96I	GGNCC	5 cut(s)	136, 739, 890, 1201, 1226
ScaI	AGTACT	1 cut(s)	29
ScrFI	CCNGG	2 cut(s)	738, 1205
SduI	GDGCHC	2 cut(s)	126, 283
SfaNI	GCATC	3 cut(s)	76, 994, 1166
SfcI	CTRYAG	1 cut(s)	1188
SfuI	TTCGAA	1 cut(s)	489
SinI	GGWCC	1 cut(s)	1201
SmiMI	CAYNNNNRTG	1 cut(s)	479
SmlI	CTYRAG	1 cut(s)	665
SmoI	CTYRAG	1 cut(s)	665
SpeI	ACTAGT	1 cut(s)	358
Sse9I	AATT	8 cut(s)	53, 200, 613, 718, 748, 819, 1110, 1131
SsiI	CCGC	3 cut(s)	95, 153, 1008
SspMI	CTAG	3 cut(s)	80, 359, 1154
SstI	GAGCTC	1 cut(s)	283
StyD4I	CCNGG	2 cut(s)	736, 1203
StyI	CCWWGG	2 cut(s)	742, 767
TaaI	ACNGT	3 cut(s)	184, 253, 1192
TaiI	ACGT	2 cut(s)	429, 434
TaqI	TCGA	2 cut(s)	286, 489
TasI	AATT	8 cut(s)	53, 200, 613, 718, 748, 819, 1110, 1131
TatI	WGTACW	3 cut(s)	27, 1121, 1144
TauI	GCSGC	1 cut(s)	1010
TfiI	GAWTC	3 cut(s)	375, 486, 1061
Tru1I	TTAA	3 cut(s)	873, 1173, 1255
Tru9I	TTAA	3 cut(s)	873, 1173, 1255
TscAI	CASTG	3 cut(s)	706, 1095, 1197
TseFI	GTSAC	2 cut(s)	361, 427
TseI	GCWGC	5 cut(s)	161, 260, 263, 412, 1066
Tsp45I	GTSAC	2 cut(s)	361, 427
TspDTI	ATGAA	3 cut(s)	367, 404, 535
TspGWI	ACGGA	1 cut(s)	1204
TspRI	CASTG	3 cut(s)	706, 1095, 1197
VpaK11BI	GGWCC	1 cut(s)	1201
XagI	CCTNNNNNAGG	1 cut(s)	949
XapI	RAATTY	2 cut(s)	200, 748
XspI	CTAG	3 cut(s)	80, 359, 1154
ZrmI	AGTACT	1 cut(s)	29

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.