Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000374

Physical Location & Seq

Genomic Coordinates Reverse (-)

46098307 .. 46101249

Gene Structure 2943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G029690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGGAGAACAGCAGCTGCGGCGGAGGGCCTTTCGGTCGAGTGGTGCGGTGGCTGAAGGCGGTGCCAGAGAGATCATGGGGTAAGGTGCTGGAGGCGGCGAGGGAAGCGAAGAAGCTCGGGAAGGATGATCCCAGAAGGATTGTGCATTCGTTCAAAGTAGGGTTGGCTCTGACGTTGGTGTCTCTTTTTTATTACTGTCGACCGCTTTATGATGGCTTCGGTGTCGATGCAATGTGGGCTGTCTTGACCGTGATCGTTGTCTTTGAGTTCTCAGTCGGAGCAACCCTAGGGAAGGGTATAAATATGATGTTGGCAACGTTACTAGCTGTTGCTCTAGCTGTTGGAGCTCATCACATATCAACTCTTTGGGGAGGAGAAGTCGGGGAACCCATATTGATTGCATTTTTCGTCTTTGTTGTAGCTGCAAGTGTGACCTTCATGAGATTCTTCCCCGCATTGAAGGCAAGGTATGACTACGGGATGTTGATATTCATACTGACCTTCTGCTTGGTTTCGGTATCTGGCTACCGCGAAACTCAGGTACTAGACATGGCACACAAGAGGCTATCAACGATTGCGATAGGAAGCTGTACTCCTATTATGGTTTGTATTTGCATTTGCCCCGTGTGGATTGGAGATGATCTCCACAATTTGGTTGCTGGTAACATGGAAAAGCTTGGGGATTTTATGGAAGGATTTGGATTTGAATACTTTGACATAAAAGGGAATGGGTTGTCATTAAGTGATAATCAATATTTTCTTCAGCAATATAAAAGTGTTCTTTCATCAAAAAGCCTTGAAGAAACCATGGTTAACTTGGCAAGATGGGAACCAGGTCATGGCGGGTTCAAGTTCGGCCACCCATGGGAGAAGTATTTGAATGTTGGAAGCCAAACTCGGCAATGTGCTTATAAAATTGAAGCTCTTAACACTTACCTGAACACTGATATCCAAGTGCCCACTGAAATTCGAAGCAAAATTCAAGAACCATGCATAGATATTTGCACTGAATCCGGAAAAGCATTGAAGGAATTAGCAGCAGCCCTCAAGAAAATGACTCGGTCATCATCAGCTGATTCCCACATTGCATGCTCAAAAGCAGCAGTTGAGAGCCTCAAGTTGTCACTCAAAAGAGGCATATGGAAAGATGCTAATCTGCTGGAAACAATACCATCTGCTGCGGTGGCGTCACTTCTTATTGAAGTCGTAGCTTGTGTTGAGAAGATTGCTGAAGCAGTTCACGAACTAGCATCCGTCGCACATTTCAAGACTGAACAGCCACAATTACTTCAGGAGCCGGTCCTTTCTGAAGAATACCATGTTGCTATTACAATTGATCGTAATTCAACTGAGGAGCTACCCAAAAATGGAAGTTCAGATGGCATCACTACTAATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

466

Amino Acids

51.23

Weight (kDa)

6.29

Isoelectric Point (pI)

38.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	38 - 378	1.7e-139	Aluminium activated malate transporter
FUSC_2	PF13515	76 - 198	1.7e-07	Fusaric acid resistance protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca	FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica	MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica	Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis	pycom03g10930 pycom11g14730
rosa_chinensis	RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata	RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora	Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii	Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa	Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha	Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana	Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	912
AasI	GACNNNNNNGTC	1 cut(s)	178
AccB1I	GGYRCC	1 cut(s)	61
AccB7I	CCANNNNNTGG	2 cut(s)	652, 839
AccI	GTMKAC	1 cut(s)	199
AccII	CGCG	1 cut(s)	531
AccIII	TCCGGA	1 cut(s)	1013
AclI	AACGTT	1 cut(s)	317
AclWI	GGATC	1 cut(s)	122
AcoI	YGGCCR	1 cut(s)	856
AcsI	RAATTY	2 cut(s)	966, 978
AcuI	CTGAAG	5 cut(s)	74, 746, 1251, 1274, 1329
AcyI	GRCGYC	1 cut(s)	1187
AfaI	GTAC	2 cut(s)	543, 592
AfiI	CCNNNNNNNGG	5 cut(s)	292, 652, 839, 865, 1367
AjnI	CCWGG	1 cut(s)	832
Alw21I	GWGCWC	1 cut(s)	349
Alw26I	GTCTC	1 cut(s)	186
AlwI	GGATC	1 cut(s)	122
AlwNI	CAGNNNCTG	1 cut(s)	15
Ama87I	CYCGRG	1 cut(s)	116
Aor13HI	TCCGGA	1 cut(s)	1013
AoxI	GGCC	2 cut(s)	26, 856
ApeKI	GCWGC	7 cut(s)	12, 15, 422, 1037, 1040, 1100, 1178
ApoI	RAATTY	2 cut(s)	966, 978
Asp700I	GAANNNNTTC	1 cut(s)	1236
AspA2I	CCTAGG	1 cut(s)	286
AspS9I	GGNCC	2 cut(s)	26, 1300
AsuII	TTCGAA	1 cut(s)	970
AvaI	CYCGRG	1 cut(s)	116
AvaII	GGWCC	1 cut(s)	1300
AvrII	CCTAGG	1 cut(s)	286
BaeGI	GKGCMC	1 cut(s)	960
BanI	GGYRCC	1 cut(s)	61
BanII	GRGCYC	1 cut(s)	349
Bbv12I	GWGCWC	1 cut(s)	349
BbvI	GCAGC	7 cut(s)	2, 24, 409, 1049, 1052, 1112, 1165
BccI	CCATC	4 cut(s)	206, 819, 1180, 1373
BciT130I	CCWGG	1 cut(s)	834
BcoDI	GTCTC	1 cut(s)	186
BfaI	CTAG	5 cut(s)	287, 323, 335, 545, 1247
BisI	GCNGC	9 cut(s)	13, 16, 19, 96, 423, 1038, 1041, 1101, 1179
BlnI	CCTAGG	1 cut(s)	286
BlsI	GCNGC	9 cut(s)	14, 17, 20, 97, 424, 1039, 1042, 1102, 1180
Bme1390I	CCNGG	1 cut(s)	834
Bme18I	GGWCC	1 cut(s)	1300
BmeT110I	CYCGRG	1 cut(s)	116
BmgT120I	GGNCC	2 cut(s)	26, 1300
BmiI	GGNNCC	4 cut(s)	63, 387, 831, 1296
BmrFI	CCNGG	1 cut(s)	834
BmsI	GCATC	4 cut(s)	217, 1138, 1259, 1392
BplI	GAGNNNNNCTC	2 cut(s)	627, 659
BpmI	CTGGAG	1 cut(s)	110
Bpu14I	TTCGAA	1 cut(s)	970
BpuEI	CTTGAG	2 cut(s)	1031, 1100
BsaBI	GATNNNNATC	1 cut(s)	1152
BsaHI	GRCGYC	1 cut(s)	1187
BsaJI	CCNNGG	3 cut(s)	286, 807, 863
BsaWI	WCCGGW	1 cut(s)	1013
BsaXI	ACNNNNNCTCC	2 cut(s)	363, 393
Bsc4I	CCNNNNNNNGG	5 cut(s)	292, 652, 839, 865, 1367
Bse118I	RCCGGY	1 cut(s)	1297
Bse3DI	GCAATG	3 cut(s)	237, 908, 1083
Bse8I	GATNNNNATC	1 cut(s)	1152
BseAI	TCCGGA	1 cut(s)	1013
BseBI	CCWGG	1 cut(s)	834
BseDI	CCNNGG	3 cut(s)	286, 807, 863
BseGI	GGATG	3 cut(s)	130, 486, 1250
BseJI	GATNNNNATC	1 cut(s)	1152
BseLI	CCNNNNNNNGG	5 cut(s)	292, 652, 839, 865, 1367
BseMI	GCAATG	3 cut(s)	237, 908, 1083
BseMII	CTCAG	3 cut(s)	285, 551, 1341
BseRI	GAGGAG	2 cut(s)	387, 1367
BseSI	GKGCMC	1 cut(s)	960
BseXI	GCAGC	7 cut(s)	2, 24, 409, 1049, 1052, 1112, 1165
Bsh1236I	CGCG	1 cut(s)	531
Bsh1285I	CGRYCG	2 cut(s)	37, 203
BshFI	GGCC	2 cut(s)	28, 858
BshNI	GGYRCC	1 cut(s)	61
BsiEI	CGRYCG	2 cut(s)	37, 203
BsiHKAI	GWGCWC	1 cut(s)	349
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	2 cut(s)	1014, 1298
BslI	CCNNNNNNNGG	5 cut(s)	292, 652, 839, 865, 1367
BsmAI	GTCTC	1 cut(s)	186
BsmI	GAATGC	1 cut(s)	145
BsnI	GGCC	2 cut(s)	28, 858
BsoBI	CYCGRG	1 cut(s)	116
Bsp119I	TTCGAA	1 cut(s)	970
Bsp1286I	GDGCHC	2 cut(s)	349, 960
Bsp13I	TCCGGA	1 cut(s)	1013
Bsp143I	GATC	5 cut(s)	71, 127, 252, 640, 1336
Bsp19I	CCATGG	2 cut(s)	807, 863
BspANI	GGCC	2 cut(s)	28, 858
BspCNI	CTCAG	3 cut(s)	284, 550, 1342
BspEI	TCCGGA	1 cut(s)	1013
BspFNI	CGCG	1 cut(s)	531
BspHI	TCATGA	1 cut(s)	438
BspLI	GGNNCC	4 cut(s)	63, 387, 831, 1296
BspPI	GGATC	1 cut(s)	122
BspT104I	TTCGAA	1 cut(s)	970
BspT107I	GGYRCC	1 cut(s)	61
BsrDI	GCAATG	3 cut(s)	237, 908, 1083
BsrFI	RCCGGY	1 cut(s)	1297
BssAI	RCCGGY	1 cut(s)	1297
BssECI	CCNNGG	3 cut(s)	286, 807, 863
BssMI	GATC	5 cut(s)	71, 127, 252, 640, 1336
BssNI	GRCGYC	1 cut(s)	1187
BssT1I	CCWWGG	3 cut(s)	286, 807, 863
Bst2UI	CCWGG	1 cut(s)	834
Bst4CI	ACNGT	2 cut(s)	197, 250
BstACI	GRCGYC	1 cut(s)	1187
BstBI	TTCGAA	1 cut(s)	970
BstC8I	GCNNGC	1 cut(s)	1090
BstDEI	CTNAG	3 cut(s)	271, 537, 1350
BstDSI	CCRYGG	2 cut(s)	807, 863
BstENI	CCTNNNNNAGG	1 cut(s)	290
BstF5I	GGATG	3 cut(s)	130, 486, 1250
BstFNI	CGCG	1 cut(s)	531
BstKTI	GATC	5 cut(s)	74, 130, 255, 643, 1339
BstMAI	GTCTC	1 cut(s)	186
BstMBI	GATC	5 cut(s)	71, 127, 252, 640, 1336
BstMCI	CGRYCG	2 cut(s)	37, 203
BstMWI	GCNNNNNNNGC	7 cut(s)	18, 104, 236, 344, 461, 1184, 1256
BstNI	CCWGG	1 cut(s)	834
BstNSI	RCATGY	1 cut(s)	1092
BstSCI	CCNGG	1 cut(s)	832
BstSLI	GKGCMC	1 cut(s)	960
BstUI	CGCG	1 cut(s)	531
BstV1I	GCAGC	7 cut(s)	2, 24, 409, 1049, 1052, 1112, 1165
BsuRI	GGCC	2 cut(s)	28, 858
BtgI	CCRYGG	2 cut(s)	807, 863
BtsCI	GGATG	3 cut(s)	130, 486, 1250
BtsIMutI	CAGTG	3 cut(s)	942, 960, 1005
Cac8I	GCNNGC	1 cut(s)	1090
CaiI	CAGNNNCTG	1 cut(s)	15
CciI	TCATGA	1 cut(s)	438
Cfr10I	RCCGGY	1 cut(s)	1297
Cfr13I	GGNCC	2 cut(s)	26, 1300
CseI	GACGC	1 cut(s)	1176
CsiI	ACCWGGT	1 cut(s)	832
Csp6I	GTAC	2 cut(s)	542, 591
CviQI	GTAC	2 cut(s)	542, 591
DdeI	CTNAG	3 cut(s)	271, 537, 1350
DpnI	GATC	5 cut(s)	73, 129, 254, 642, 1338
DpnII	GATC	5 cut(s)	71, 127, 252, 640, 1336
DrdI	GACNNNNNNGTC	1 cut(s)	178
DseDI	GACNNNNNNGTC	1 cut(s)	178
EaeI	YGGCCR	1 cut(s)	856
EciI	GGCGGA	1 cut(s)	36
Ecl136II	GAGCTC	1 cut(s)	347
Eco130I	CCWWGG	3 cut(s)	286, 807, 863
Eco24I	GRGCYC	1 cut(s)	349
Eco32I	GATATC	1 cut(s)	949
Eco47I	GGWCC	1 cut(s)	1300
Eco53kI	GAGCTC	1 cut(s)	347
Eco57I	CTGAAG	5 cut(s)	74, 746, 1251, 1274, 1329
Eco88I	CYCGRG	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	347
EcoNI	CCTNNNNNAGG	1 cut(s)	290
EcoO109I	RGGNCCY	1 cut(s)	26
EcoRII	CCWGG	1 cut(s)	832
EcoRV	GATATC	1 cut(s)	949
EcoT14I	CCWWGG	3 cut(s)	286, 807, 863
EcoT22I	ATGCAT	1 cut(s)	995
EcoT38I	GRGCYC	1 cut(s)	349
ErhI	CCWWGG	3 cut(s)	286, 807, 863
FauI	CCCGC	2 cut(s)	460, 836
FauNDI	CATATG	1 cut(s)	1139
FblI	GTMKAC	1 cut(s)	199
Fnu4HI	GCNGC	9 cut(s)	13, 16, 19, 96, 423, 1038, 1041, 1101, 1179
FokI	GGATG	3 cut(s)	137, 493, 1237
FriOI	GRGCYC	1 cut(s)	349
Fsp4HI	GCNGC	9 cut(s)	13, 16, 19, 96, 423, 1038, 1041, 1101, 1179
FspBI	CTAG	5 cut(s)	287, 323, 335, 545, 1247
GluI	GCNGC	9 cut(s)	13, 16, 19, 96, 423, 1038, 1041, 1101, 1179
GsuI	CTGGAG	1 cut(s)	110
HaeIII	GGCC	2 cut(s)	28, 858
HapII	CCGG	2 cut(s)	1014, 1298
HgaI	GACGC	1 cut(s)	1176
Hin1I	GRCGYC	1 cut(s)	1187
HincII	GTYRAC	2 cut(s)	200, 814
HindII	GTYRAC	2 cut(s)	200, 814
HindIII	AAGCTT	1 cut(s)	674
HinfI	GANTC	4 cut(s)	444, 1010, 1057, 1076
HpaI	GTTAAC	1 cut(s)	814
HpaII	CCGG	2 cut(s)	1014, 1298
Hpy166II	GTNNAC	3 cut(s)	200, 814, 1240
Hpy188I	TCNGA	4 cut(s)	171, 278, 1309, 1378
Hpy188III	TCNNGA	9 cut(s)	118, 244, 439, 983, 1014, 1048, 1241, 1267, 1292
Hpy8I	GTNNAC	3 cut(s)	200, 814, 1240
Hpy99I	CGWCG	1 cut(s)	1259
HpyAV	CCTTC	9 cut(s)	49, 115, 129, 286, 445, 454, 511, 686, 1021
HpyCH4III	ACNGT	2 cut(s)	197, 250
HpyCH4IV	ACGT	2 cut(s)	173, 317
HpyCH4V	TGCA	8 cut(s)	145, 230, 401, 425, 615, 993, 1005, 1088
HpyF10VI	GCNNNNNNNGC	7 cut(s)	18, 104, 236, 344, 461, 1184, 1256
HpyF3I	CTNAG	3 cut(s)	271, 537, 1350
HpySE526I	ACGT	2 cut(s)	173, 317
Hsp92I	GRCGYC	1 cut(s)	1187
Kpn2I	TCCGGA	1 cut(s)	1013
KspAI	GTTAAC	1 cut(s)	814
Kzo9I	GATC	5 cut(s)	71, 127, 252, 640, 1336
LmnI	GCTCC	4 cut(s)	278, 344, 1294, 1354
Lsp1109I	GCAGC	7 cut(s)	2, 24, 409, 1049, 1052, 1112, 1165
LweI	GCATC	4 cut(s)	217, 1138, 1259, 1392
MabI	ACCWGGT	1 cut(s)	832
MaeI	CTAG	5 cut(s)	287, 323, 335, 545, 1247
MaeII	ACGT	2 cut(s)	173, 317
MaeIII	GTNAC	5 cut(s)	318, 430, 662, 1122, 1188
MalI	GATC	5 cut(s)	73, 129, 254, 642, 1338
MboI	GATC	5 cut(s)	71, 127, 252, 640, 1336
MboII	GAAGA	6 cut(s)	121, 439, 752, 812, 1234, 1322
MfeI	CAATTG	1 cut(s)	1332
MhlI	GDGCHC	2 cut(s)	349, 960
MluCI	AATT	8 cut(s)	649, 915, 966, 978, 1031, 1283, 1332, 1342
MlyI	GAGTC	1 cut(s)	1051
MmeI	TCCRAC	3 cut(s)	256, 322, 865
MnlI	CCTC	9 cut(s)	17, 85, 93, 365, 555, 1055, 1124, 1127, 1345
Mph1103I	ATGCAT	1 cut(s)	995
MroI	TCCGGA	1 cut(s)	1013
MroXI	GAANNNNTTC	1 cut(s)	1236
MseI	TTAA	4 cut(s)	740, 813, 927, 1399
MspA1I	CMGCKG	2 cut(s)	15, 1073
MspI	CCGG	2 cut(s)	1014, 1298
MspR9I	CCNGG	1 cut(s)	834
MunI	CAATTG	1 cut(s)	1332
Mva1269I	GAATGC	1 cut(s)	145
MvaI	CCWGG	1 cut(s)	834
MvnI	CGCG	1 cut(s)	531
MwoI	GCNNNNNNNGC	7 cut(s)	18, 104, 236, 344, 461, 1184, 1256
NcoI	CCATGG	2 cut(s)	807, 863
NdeI	CATATG	1 cut(s)	1139
NdeII	GATC	5 cut(s)	71, 127, 252, 640, 1336
NlaIV	GGNNCC	4 cut(s)	63, 387, 831, 1296
NmeAIII	GCCGAG	1 cut(s)	877
NmuCI	GTSAC	3 cut(s)	430, 1122, 1188
NsiI	ATGCAT	1 cut(s)	995
NspI	RCATGY	1 cut(s)	1092
NspV	TTCGAA	1 cut(s)	970
PaeI	GCATGC	1 cut(s)	1092
PagI	TCATGA	1 cut(s)	438
PctI	GAATGC	1 cut(s)	145
PdmI	GAANNNNTTC	1 cut(s)	1236
PfeI	GAWTC	3 cut(s)	444, 1010, 1076
PflFI	GACNNNGTC	1 cut(s)	1060
PflMI	CCANNNNNTGG	2 cut(s)	652, 839
PkrI	GCNGC	9 cut(s)	14, 17, 20, 97, 424, 1039, 1042, 1102, 1180
PleI	GAGTC	1 cut(s)	1051
PpsI	GAGTC	1 cut(s)	1051
PsiI	TTATAA	1 cut(s)	912
Psp124BI	GAGCTC	1 cut(s)	349
Psp1406I	AACGTT	1 cut(s)	317
Psp6I	CCWGG	1 cut(s)	832
PspGI	CCWGG	1 cut(s)	832
PspN4I	GGNNCC	4 cut(s)	63, 387, 831, 1296
PspPI	GGNCC	2 cut(s)	26, 1300
PstNI	CAGNNNCTG	1 cut(s)	15
PsyI	GACNNNGTC	1 cut(s)	1060
PvuII	CAGCTG	2 cut(s)	15, 1073
RsaI	GTAC	2 cut(s)	543, 592
RsaNI	GTAC	2 cut(s)	542, 591
SacI	GAGCTC	1 cut(s)	349
SalI	GTCGAC	1 cut(s)	198
SaqAI	TTAA	4 cut(s)	740, 813, 927, 1399
SatI	GCNGC	9 cut(s)	13, 16, 19, 96, 423, 1038, 1041, 1101, 1179
Sau3AI	GATC	5 cut(s)	71, 127, 252, 640, 1336
Sau96I	GGNCC	2 cut(s)	26, 1300
SchI	GAGTC	1 cut(s)	1051
ScrFI	CCNGG	1 cut(s)	834
SduI	GDGCHC	2 cut(s)	349, 960
SexAI	ACCWGGT	1 cut(s)	832
SfaNI	GCATC	4 cut(s)	217, 1138, 1259, 1392
SfuI	TTCGAA	1 cut(s)	970
SinI	GGWCC	1 cut(s)	1300
SmlI	CTYRAG	2 cut(s)	1046, 1115
SmoI	CTYRAG	2 cut(s)	1046, 1115
SphI	GCATGC	1 cut(s)	1092
Sse9I	AATT	8 cut(s)	649, 915, 966, 978, 1031, 1283, 1332, 1342
SspI	AATATT	1 cut(s)	755
SspMI	CTAG	5 cut(s)	287, 323, 335, 545, 1247
SstI	GAGCTC	1 cut(s)	349
StyD4I	CCNGG	1 cut(s)	832
StyI	CCWWGG	3 cut(s)	286, 807, 863
TaaI	ACNGT	2 cut(s)	197, 250
TaiI	ACGT	2 cut(s)	176, 320
TaqI	TCGA	4 cut(s)	37, 199, 225, 970
TaqII	GACCGA	2 cut(s)	23, 1050
TasI	AATT	8 cut(s)	649, 915, 966, 978, 1031, 1283, 1332, 1342
TatI	WGTACW	1 cut(s)	590
TauI	GCSGC	2 cut(s)	21, 98
TfiI	GAWTC	3 cut(s)	444, 1010, 1076
Tru1I	TTAA	4 cut(s)	740, 813, 927, 1399
Tru9I	TTAA	4 cut(s)	740, 813, 927, 1399
TscAI	CASTG	3 cut(s)	949, 967, 1012
TseFI	GTSAC	3 cut(s)	430, 1122, 1188
TseI	GCWGC	7 cut(s)	12, 15, 422, 1037, 1040, 1100, 1178
Tsp45I	GTSAC	3 cut(s)	430, 1122, 1188
TspDTI	ATGAA	3 cut(s)	427, 481, 774
TspGWI	ACGGA	1 cut(s)	1243
TspRI	CASTG	3 cut(s)	949, 967, 1012
Tth111I	GACNNNGTC	1 cut(s)	1060
Van91I	CCANNNNNTGG	2 cut(s)	652, 839
VpaK11BI	GGWCC	1 cut(s)	1300
XagI	CCTNNNNNAGG	1 cut(s)	290
XapI	RAATTY	2 cut(s)	966, 978
XceI	RCATGY	1 cut(s)	1092
XcmI	CCANNNNNNNNNTGG	2 cut(s)	72, 814
XmaJI	CCTAGG	1 cut(s)	286
XmiI	GTMKAC	1 cut(s)	199
XmnI	GAANNNNTTC	1 cut(s)	1236
XspI	CTAG	5 cut(s)	287, 323, 335, 545, 1247
Zsp2I	ATGCAT	1 cut(s)	995

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.