Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000374

Physical Location & Seq

Genomic Coordinates Reverse (-)

45219378 .. 45222315

Gene Structure 2938 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ32618

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGACTTCTGCAGATTTTGTTGATATGGAGAACAGCAGCTGCGGCGGAGGGCCTTTCGGTCGCGTGGTGCGGTGGCTGAAGCCGGTGCCGGAGAGGTCATGGGGTAAGGTGCTGGAGGCGGCGAGGGAGGCGAAGAAGCTCGGGGAGGATGATCTGAGAAGGATTGTGCATTCGTTCAAAGTAGGGTTGGCTCTGACGTTGGTGTCTCTTTTTTATTACTATCGACCGCTTTATGATGGCTTCGGTGACGATGCAATGTGGGCTGTCTTGACCGTGGTCGTTGTCTTTGAGTTCTCGGTTGGAGCAACCCTAGGGAAGGGTATAAATAGGATGTTGGCAACGTTACTAGCTGGTGCTCTAGCTGTTGGAGTTCATCACATATCAACTCTTTGGGGAGGAGAAGTCGGGGAGCCCATATTGATTGCATTTTTCGTCTTCGTTGTAGCTGCAAGTGTGACCTTCATGCGATTCTTCCCCGCATTGAAAGCAAGGTATGACTACGGGCTGTTGATATTCACACTGACCTTCTGCTTGGTTTCGGTATCTGGCTACCGCGAAACTCAGGTACTAGACGTGGCACACAAGAGGCTATCAACGATTGCGATAGGAAGCTGTACTTCTATTATGGTTTGTATTTGCATCTGCCCTGTGTGGATTGGAGTTGATCTCCACAATTTGGTTGCTGGTAACATGGAAAATCTTGGGGTCTTTATGGAAGGTACATGTGTTAACTTGGCAAGATGGGAACCAGGTCATGGCGGGTTCAAGTTCGGCCACCCATGGGAGAAGTATTTGAATGTTGGAAGCCAAACTCGGCAATGTGCGTATAAAATTGAAGCTCTGAACACTTACCTGAACACTGGTATCCAAGTGCCCGCTGAAATTCGAAGCGAAATTCAAGAACCATGCATAAATATTTGCACTGAATCCGGAAAAGCATTGAAGGAATTAGCAGCAGCCCTCAAGAAAATGACTCGGTCATCATCAGCTGATTCCCACATTGCATGCTCAAAAGCAGCAGTTGAGAGCCTCAAGTTATTGTCACTCAAAAGAGGCATATGGAAAGATGCTGATCTGCTGGAAACAATACCATCTGCTGCGGTGGCGTCACTTCTTATTGAAGTCGTAGCTTGTGTTGAGAAGATTGCTGAAGCAGTTCACGAACTAGCATCCGTCGCACATTTCAAGACTGAACAGCCACAATTACTTCAGGAGCCAGCGCTTTCTGAAGAATATCATGTTGCTATTACAATTGATCGTAATTCAACTGAGGGGCTACCCAAAAATGGAAGTTCAGATTGCATCACTACTAATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

439

Amino Acids

47.87

Weight (kDa)

6.15

Isoelectric Point (pI)

40.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	46 - 241	1.1e-89	Aluminium activated malate transporter
FUSC_2	PF13515	70 - 210	6.8e-10	Fusaric acid resistance protein-like
ALMT	PF11744	243 - 345	3.2e-30	Aluminium activated malate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca	FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica	MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica	Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis	pycom03g10930 pycom11g14730
rosa_chinensis	RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata	RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora	Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii	Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa	Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha	Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana	Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	202
AccB1I	GGYRCC	1 cut(s)	85
AccB7I	CCANNNNNTGG	2 cut(s)	676, 755
AccII	CGCG	2 cut(s)	63, 555
AccIII	TCCGGA	1 cut(s)	929
AclI	AACGTT	1 cut(s)	341
AcoI	YGGCCR	1 cut(s)	772
AcsI	RAATTY	2 cut(s)	882, 894
AcuI	CTGAAG	4 cut(s)	98, 1170, 1193, 1248
AcyI	GRCGYC	1 cut(s)	1106
AfaI	GTAC	3 cut(s)	567, 616, 721
AfeI	AGCGCT	1 cut(s)	1221
AfiI	CCNNNNNNNGG	5 cut(s)	316, 676, 755, 781, 1286
AflIII	ACRYGT	1 cut(s)	722
AjiI	CACGTC	1 cut(s)	574
AjnI	CCWGG	1 cut(s)	748
AluBI	AGCT	9 cut(s)	39, 139, 350, 362, 446, 612, 839, 989, 1130
AluI	AGCT	9 cut(s)	39, 139, 350, 362, 446, 612, 839, 989, 1130
Alw21I	GWGCWC	1 cut(s)	358
Alw26I	GTCTC	1 cut(s)	210
AlwNI	CAGNNNCTG	1 cut(s)	39
Ama87I	CYCGRG	1 cut(s)	140
Aor13HI	TCCGGA	1 cut(s)	929
Aor51HI	AGCGCT	1 cut(s)	1221
AoxI	GGCC	2 cut(s)	50, 772
ApeKI	GCWGC	7 cut(s)	36, 39, 446, 953, 956, 1016, 1097
ApoI	RAATTY	2 cut(s)	882, 894
Asp700I	GAANNNNTTC	1 cut(s)	1155
AspA2I	CCTAGG	1 cut(s)	310
AspLEI	GCGC	1 cut(s)	1222
AspS9I	GGNCC	1 cut(s)	50
AsuHPI	GGTGA	1 cut(s)	257
AsuII	TTCGAA	1 cut(s)	886
AvaI	CYCGRG	1 cut(s)	140
AvrII	CCTAGG	1 cut(s)	310
BaeGI	GKGCMC	1 cut(s)	876
BaeI	ACNNNNGTAYC	4 cut(s)	711, 744, 847, 880
BanI	GGYRCC	1 cut(s)	85
BanII	GRGCYC	1 cut(s)	414
BbsI	GAAGAC	1 cut(s)	427
Bbv12I	GWGCWC	1 cut(s)	358
BbvI	GCAGC	7 cut(s)	26, 48, 433, 965, 968, 1028, 1084
BccI	CCATC	3 cut(s)	230, 735, 1099
BciT130I	CCWGG	1 cut(s)	750
BciVI	GTATCC	1 cut(s)	875
BcoDI	GTCTC	1 cut(s)	210
BfaI	CTAG	5 cut(s)	311, 347, 359, 569, 1166
BfmI	CTRYAG	1 cut(s)	9
BfoI	RGCGCY	1 cut(s)	1223
BfuI	GTATCC	1 cut(s)	875
BisI	GCNGC	9 cut(s)	37, 40, 43, 120, 447, 954, 957, 1017, 1098
BlnI	CCTAGG	1 cut(s)	310
BlsI	GCNGC	9 cut(s)	38, 41, 44, 121, 448, 955, 958, 1018, 1099
Bme1390I	CCNGG	1 cut(s)	750
BmeT110I	CYCGRG	1 cut(s)	140
BmgBI	CACGTC	1 cut(s)	574
BmgT120I	GGNCC	1 cut(s)	50
BmiI	GGNNCC	4 cut(s)	87, 411, 747, 1215
BmrFI	CCNGG	1 cut(s)	750
BmsI	GCATC	5 cut(s)	241, 648, 1057, 1178, 1311
BoxI	GACNNNNGTC	1 cut(s)	275
BpiI	GAAGAC	1 cut(s)	427
BplI	GAGNNNNNCTC	2 cut(s)	651, 683
BpmI	CTGGAG	1 cut(s)	134
Bpu14I	TTCGAA	1 cut(s)	886
BpuEI	CTTGAG	2 cut(s)	947, 1016
BsaBI	GATNNNNATC	1 cut(s)	1071
BsaHI	GRCGYC	1 cut(s)	1106
BsaJI	CCNNGG	3 cut(s)	273, 310, 779
BsaWI	WCCGGW	1 cut(s)	929
BsaXI	ACNNNNNCTCC	2 cut(s)	387, 417
Bsc4I	CCNNNNNNNGG	5 cut(s)	316, 676, 755, 781, 1286
Bse118I	RCCGGY	1 cut(s)	82
Bse1I	ACTGG	1 cut(s)	865
Bse3DI	GCAATG	3 cut(s)	261, 824, 999
Bse8I	GATNNNNATC	1 cut(s)	1071
BseAI	TCCGGA	1 cut(s)	929
BseBI	CCWGG	1 cut(s)	750
BseDI	CCNNGG	3 cut(s)	273, 310, 779
BseGI	GGATG	3 cut(s)	154, 336, 1169
BseJI	GATNNNNATC	1 cut(s)	1071
BseLI	CCNNNNNNNGG	5 cut(s)	316, 676, 755, 781, 1286
BseMI	GCAATG	3 cut(s)	261, 824, 999
BseMII	CTCAG	3 cut(s)	146, 575, 1260
BseNI	ACTGG	1 cut(s)	865
BseRI	GAGGAG	1 cut(s)	411
BseSI	GKGCMC	1 cut(s)	876
BseXI	GCAGC	7 cut(s)	26, 48, 433, 965, 968, 1028, 1084
Bsh1236I	CGCG	2 cut(s)	63, 555
Bsh1285I	CGRYCG	2 cut(s)	61, 227
BshFI	GGCC	2 cut(s)	52, 774
BshNI	GGYRCC	1 cut(s)	85
BsiEI	CGRYCG	2 cut(s)	61, 227
BsiHKAI	GWGCWC	1 cut(s)	358
BsiHKCI	CYCGRG	1 cut(s)	140
BsiSI	CCGG	3 cut(s)	83, 89, 930
BslI	CCNNNNNNNGG	5 cut(s)	316, 676, 755, 781, 1286
BsmAI	GTCTC	1 cut(s)	210
BsmI	GAATGC	1 cut(s)	169
BsnI	GGCC	2 cut(s)	52, 774
BsoBI	CYCGRG	1 cut(s)	140
Bsp119I	TTCGAA	1 cut(s)	886
Bsp1286I	GDGCHC	3 cut(s)	358, 414, 876
Bsp13I	TCCGGA	1 cut(s)	929
Bsp143I	GATC	4 cut(s)	151, 664, 1072, 1255
Bsp19I	CCATGG	1 cut(s)	779
BspANI	GGCC	2 cut(s)	52, 774
BspCNI	CTCAG	3 cut(s)	147, 574, 1261
BspEI	TCCGGA	1 cut(s)	929
BspFNI	CGCG	2 cut(s)	63, 555
BspLI	GGNNCC	4 cut(s)	87, 411, 747, 1215
BspMAI	CTGCAG	1 cut(s)	13
BspT104I	TTCGAA	1 cut(s)	886
BspT107I	GGYRCC	1 cut(s)	85
BsrDI	GCAATG	3 cut(s)	261, 824, 999
BsrFI	RCCGGY	1 cut(s)	82
BsrI	ACTGG	1 cut(s)	865
BssAI	RCCGGY	1 cut(s)	82
BssECI	CCNNGG	3 cut(s)	273, 310, 779
BssMI	GATC	4 cut(s)	151, 664, 1072, 1255
BssNI	GRCGYC	1 cut(s)	1106
BssT1I	CCWWGG	2 cut(s)	310, 779
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	1 cut(s)	274
BstACI	GRCGYC	1 cut(s)	1106
BstBI	TTCGAA	1 cut(s)	886
BstC8I	GCNNGC	3 cut(s)	876, 1006, 1218
BstDEI	CTNAG	3 cut(s)	155, 561, 1269
BstDSI	CCRYGG	2 cut(s)	273, 779
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	3 cut(s)	154, 336, 1169
BstFNI	CGCG	2 cut(s)	63, 555
BstH2I	RGCGCY	1 cut(s)	1223
BstHHI	GCGC	1 cut(s)	1222
BstKTI	GATC	4 cut(s)	154, 667, 1075, 1258
BstMAI	GTCTC	1 cut(s)	210
BstMBI	GATC	4 cut(s)	151, 664, 1072, 1255
BstMCI	CGRYCG	2 cut(s)	61, 227
BstMWI	GCNNNNNNNGC	6 cut(s)	42, 128, 260, 485, 1103, 1175
BstNI	CCWGG	1 cut(s)	750
BstNSI	RCATGY	2 cut(s)	726, 1008
BstPAI	GACNNNNGTC	1 cut(s)	275
BstSCI	CCNGG	1 cut(s)	748
BstSFI	CTRYAG	1 cut(s)	9
BstSLI	GKGCMC	1 cut(s)	876
BstUI	CGCG	2 cut(s)	63, 555
BstV1I	GCAGC	7 cut(s)	26, 48, 433, 965, 968, 1028, 1084
BstV2I	GAAGAC	1 cut(s)	427
BsuI	GTATCC	1 cut(s)	875
BsuRI	GGCC	2 cut(s)	52, 774
BtgI	CCRYGG	2 cut(s)	273, 779
BtrI	CACGTC	1 cut(s)	574
BtsCI	GGATG	3 cut(s)	154, 336, 1169
BtsIMutI	CAGTG	3 cut(s)	518, 858, 921
Cac8I	GCNNGC	3 cut(s)	876, 1006, 1218
CaiI	CAGNNNCTG	1 cut(s)	39
CfoI	GCGC	1 cut(s)	1222
Cfr10I	RCCGGY	1 cut(s)	82
Cfr13I	GGNCC	1 cut(s)	50
CseI	GACGC	1 cut(s)	1095
CsiI	ACCWGGT	1 cut(s)	748
Csp6I	GTAC	3 cut(s)	566, 615, 720
CviAII	CATG	9 cut(s)	99, 463, 691, 723, 755, 780, 906, 1005, 1238
CviQI	GTAC	3 cut(s)	566, 615, 720
DdeI	CTNAG	3 cut(s)	155, 561, 1269
DpnI	GATC	4 cut(s)	153, 666, 1074, 1257
DpnII	GATC	4 cut(s)	151, 664, 1072, 1255
DrdI	GACNNNNNNGTC	1 cut(s)	202
DseDI	GACNNNNNNGTC	1 cut(s)	202
EaeI	YGGCCR	1 cut(s)	772
EciI	GGCGGA	1 cut(s)	60
Eco130I	CCWWGG	2 cut(s)	310, 779
Eco24I	GRGCYC	1 cut(s)	414
Eco47III	AGCGCT	1 cut(s)	1221
Eco57I	CTGAAG	4 cut(s)	98, 1170, 1193, 1248
Eco88I	CYCGRG	1 cut(s)	140
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoO109I	RGGNCCY	1 cut(s)	50
EcoRII	CCWGG	1 cut(s)	748
EcoT14I	CCWWGG	2 cut(s)	310, 779
EcoT22I	ATGCAT	1 cut(s)	911
EcoT38I	GRGCYC	1 cut(s)	414
ErhI	CCWWGG	2 cut(s)	310, 779
FaeI	CATG	9 cut(s)	102, 466, 694, 726, 758, 783, 909, 1008, 1241
FalI	AAGNNNNNCTT	2 cut(s)	601, 633
FatI	CATG	9 cut(s)	98, 462, 690, 722, 754, 779, 905, 1004, 1237
FauI	CCCGC	3 cut(s)	484, 752, 883
FauNDI	CATATG	1 cut(s)	1058
Fnu4HI	GCNGC	9 cut(s)	37, 40, 43, 120, 447, 954, 957, 1017, 1098
FokI	GGATG	3 cut(s)	161, 343, 1156
FriOI	GRGCYC	1 cut(s)	414
Fsp4HI	GCNGC	9 cut(s)	37, 40, 43, 120, 447, 954, 957, 1017, 1098
FspBI	CTAG	5 cut(s)	311, 347, 359, 569, 1166
GlaI	GCGC	1 cut(s)	1221
GluI	GCNGC	9 cut(s)	37, 40, 43, 120, 447, 954, 957, 1017, 1098
GsuI	CTGGAG	1 cut(s)	134
HaeII	RGCGCY	1 cut(s)	1223
HaeIII	GGCC	2 cut(s)	52, 774
HapII	CCGG	3 cut(s)	83, 89, 930
HgaI	GACGC	1 cut(s)	1095
HhaI	GCGC	1 cut(s)	1222
Hin1I	GRCGYC	1 cut(s)	1106
Hin1II	CATG	9 cut(s)	102, 466, 694, 726, 758, 783, 909, 1008, 1241
Hin6I	GCGC	1 cut(s)	1220
HinP1I	GCGC	1 cut(s)	1220
HincII	GTYRAC	1 cut(s)	730
HindII	GTYRAC	1 cut(s)	730
HinfI	GANTC	4 cut(s)	468, 926, 973, 992
HpaI	GTTAAC	1 cut(s)	730
HpaII	CCGG	3 cut(s)	83, 89, 930
HphI	GGTGA	1 cut(s)	257
Hpy166II	GTNNAC	2 cut(s)	730, 1159
Hpy188I	TCNGA	5 cut(s)	156, 195, 843, 1228, 1297
Hpy188III	TCNNGA	7 cut(s)	268, 899, 930, 964, 1160, 1186, 1211
Hpy8I	GTNNAC	2 cut(s)	730, 1159
Hpy99I	CGWCG	1 cut(s)	1178
HpyAV	CCTTC	6 cut(s)	153, 310, 469, 535, 710, 937
HpyCH4III	ACNGT	1 cut(s)	274
HpyCH4IV	ACGT	3 cut(s)	197, 341, 573
HpyF10VI	GCNNNNNNNGC	6 cut(s)	42, 128, 260, 485, 1103, 1175
HpyF3I	CTNAG	3 cut(s)	155, 561, 1269
HpySE526I	ACGT	3 cut(s)	197, 341, 573
Hsp92I	GRCGYC	1 cut(s)	1106
Hsp92II	CATG	9 cut(s)	102, 466, 694, 726, 758, 783, 909, 1008, 1241
HspAI	GCGC	1 cut(s)	1220
Kpn2I	TCCGGA	1 cut(s)	929
KspAI	GTTAAC	1 cut(s)	730
Kzo9I	GATC	4 cut(s)	151, 664, 1072, 1255
LmnI	GCTCC	3 cut(s)	302, 409, 1213
Lsp1109I	GCAGC	7 cut(s)	26, 48, 433, 965, 968, 1028, 1084
LweI	GCATC	5 cut(s)	241, 648, 1057, 1178, 1311
MabI	ACCWGGT	1 cut(s)	748
MaeI	CTAG	5 cut(s)	311, 347, 359, 569, 1166
MaeII	ACGT	3 cut(s)	197, 341, 573
MaeIII	GTNAC	6 cut(s)	245, 342, 454, 686, 1041, 1107
MalI	GATC	4 cut(s)	153, 666, 1074, 1257
MboI	GATC	4 cut(s)	151, 664, 1072, 1255
MboII	GAAGA	5 cut(s)	145, 427, 463, 1153, 1241
MfeI	CAATTG	1 cut(s)	1251
MhlI	GDGCHC	3 cut(s)	358, 414, 876
MluCI	AATT	8 cut(s)	673, 831, 882, 894, 947, 1202, 1251, 1261
MlyI	GAGTC	1 cut(s)	967
MmeI	TCCRAC	3 cut(s)	280, 346, 781
Mph1103I	ATGCAT	1 cut(s)	911
MroI	TCCGGA	1 cut(s)	929
MroXI	GAANNNNTTC	1 cut(s)	1155
MseI	TTAA	2 cut(s)	729, 1318
MspA1I	CMGCKG	3 cut(s)	39, 878, 989
MspI	CCGG	3 cut(s)	83, 89, 930
MspR9I	CCNGG	1 cut(s)	750
MunI	CAATTG	1 cut(s)	1251
Mva1269I	GAATGC	1 cut(s)	169
MvaI	CCWGG	1 cut(s)	750
MvnI	CGCG	2 cut(s)	63, 555
MwoI	GCNNNNNNNGC	6 cut(s)	42, 128, 260, 485, 1103, 1175
NcoI	CCATGG	1 cut(s)	779
NdeI	CATATG	1 cut(s)	1058
NdeII	GATC	4 cut(s)	151, 664, 1072, 1255
NlaIII	CATG	9 cut(s)	102, 466, 694, 726, 758, 783, 909, 1008, 1241
NlaIV	GGNNCC	4 cut(s)	87, 411, 747, 1215
NmeAIII	GCCGAG	1 cut(s)	793
NmuCI	GTSAC	4 cut(s)	245, 454, 1041, 1107
NsiI	ATGCAT	1 cut(s)	911
NspI	RCATGY	2 cut(s)	726, 1008
NspV	TTCGAA	1 cut(s)	886
PaeI	GCATGC	1 cut(s)	1008
PciI	ACATGT	1 cut(s)	722
PctI	GAATGC	1 cut(s)	169
PdmI	GAANNNNTTC	1 cut(s)	1155
PfeI	GAWTC	3 cut(s)	468, 926, 992
PflFI	GACNNNGTC	1 cut(s)	976
PflMI	CCANNNNNTGG	2 cut(s)	676, 755
PkrI	GCNGC	9 cut(s)	38, 41, 44, 121, 448, 955, 958, 1018, 1099
PleI	GAGTC	1 cut(s)	967
PpsI	GAGTC	1 cut(s)	967
PscI	ACATGT	1 cut(s)	722
PshAI	GACNNNNGTC	1 cut(s)	275
Psp1406I	AACGTT	1 cut(s)	341
Psp6I	CCWGG	1 cut(s)	748
PspGI	CCWGG	1 cut(s)	748
PspN4I	GGNNCC	4 cut(s)	87, 411, 747, 1215
PspPI	GGNCC	1 cut(s)	50
PstI	CTGCAG	1 cut(s)	13
PstNI	CAGNNNCTG	1 cut(s)	39
PsyI	GACNNNGTC	1 cut(s)	976
PvuII	CAGCTG	2 cut(s)	39, 989
RsaI	GTAC	3 cut(s)	567, 616, 721
RsaNI	GTAC	3 cut(s)	566, 615, 720
SaqAI	TTAA	2 cut(s)	729, 1318
SatI	GCNGC	9 cut(s)	37, 40, 43, 120, 447, 954, 957, 1017, 1098
Sau3AI	GATC	4 cut(s)	151, 664, 1072, 1255
Sau96I	GGNCC	1 cut(s)	50
SchI	GAGTC	1 cut(s)	967
ScrFI	CCNGG	1 cut(s)	750
SduI	GDGCHC	3 cut(s)	358, 414, 876
SexAI	ACCWGGT	1 cut(s)	748
SfaNI	GCATC	5 cut(s)	241, 648, 1057, 1178, 1311
SfcI	CTRYAG	1 cut(s)	9
SfuI	TTCGAA	1 cut(s)	886
SmlI	CTYRAG	2 cut(s)	962, 1031
SmoI	CTYRAG	2 cut(s)	962, 1031
SphI	GCATGC	1 cut(s)	1008
Sse9I	AATT	8 cut(s)	673, 831, 882, 894, 947, 1202, 1251, 1261
SspI	AATATT	1 cut(s)	916
SspMI	CTAG	5 cut(s)	311, 347, 359, 569, 1166
StyD4I	CCNGG	1 cut(s)	748
StyI	CCWWGG	2 cut(s)	310, 779
TaaI	ACNGT	1 cut(s)	274
TaiI	ACGT	3 cut(s)	200, 344, 576
TaqI	TCGA	2 cut(s)	223, 886
TaqII	GACCGA	2 cut(s)	47, 966
TasI	AATT	8 cut(s)	673, 831, 882, 894, 947, 1202, 1251, 1261
TatI	WGTACW	1 cut(s)	614
TauI	GCSGC	2 cut(s)	45, 122
TfiI	GAWTC	3 cut(s)	468, 926, 992
Tru1I	TTAA	2 cut(s)	729, 1318
Tru9I	TTAA	2 cut(s)	729, 1318
TscAI	CASTG	3 cut(s)	525, 865, 928
TseFI	GTSAC	4 cut(s)	245, 454, 1041, 1107
TseI	GCWGC	7 cut(s)	36, 39, 446, 953, 956, 1016, 1097
Tsp45I	GTSAC	4 cut(s)	245, 454, 1041, 1107
TspDTI	ATGAA	2 cut(s)	362, 451
TspGWI	ACGGA	1 cut(s)	1162
TspRI	CASTG	3 cut(s)	525, 865, 928
Tth111I	GACNNNGTC	1 cut(s)	976
Van91I	CCANNNNNTGG	2 cut(s)	676, 755
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	2 cut(s)	882, 894
XceI	RCATGY	2 cut(s)	726, 1008
XmaJI	CCTAGG	1 cut(s)	310
XmnI	GAANNNNTTC	1 cut(s)	1155
XspI	CTAG	5 cut(s)	311, 347, 359, 569, 1166
Zsp2I	ATGCAT	1 cut(s)	911

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.