Rorug05G0238300

Aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
25156971 .. 25164246
7276 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0238300.1

Sequence Viewer

Length: 3033 bp
ATGAAGATGGCAAGTAGAGATAAGTTGATCATGATGCTCATGATATTGGTTTTCTGCTTCATATGCATAAACTCAGTCAAAGTTGAAGCACAGTCTGCAACTCTTATTGCTTCAGAAGTGGAAGCGCTGAAAGAAATAGCTACACAAATAGGAAAGAAAGATTGGAACTTTAGCGTCGACCCTTGCAGCAATGACACGAGCTGGGCCACCCCAATATCTGCTGCCAGGCCTCTGTTCAACAACACTGTCACCTGCAACTGCTCCTTCTCCGATGGTGCATGCCACGTCACCAACATCTTTCTTAAAGGGCAAGACCTTGCTGGTGTGCTTCCACCGTCTATTGCAAAGTTACCCTACCTGATAAATGTCGATTTCACAAGGAACTACCTAAATGGCAGCATACCGCGAGAATGGGCATCGACAAAGTTGCAATATCTGTCCATTACTGTGAACAACTTATCTGGACCAATCCCAAGCTACCTGGGAAACATTACCACTCTAACTTATCTGAGCATAGAGAATAACATGTTCTCAGGAACTGTTCCTCCTGAGCTTGGAAACTTGGTTAACTTGCAGAATCTTATTCTTAGTGCAAACAATCTCACAGGAGAATTGCCGGCAGCTCTTATGAATCTGACTAAGTTAACAGAACTGAGGATTAGCAGCAACAACTTCACTGGAAGAATGCCCGACTTTTTTCAAAGTTGGAATCAACTTCAGAAATTAGAGATCCAAGCTAGTGGTCTACAAGGCCCCATTCCACCTAGCATTTCTGTCTTGAGTAATTTAACAGAACTAAGGATCAGCGACTTAAATGGAGGGGGTTCAGTATTTCCAAACTTGAGGAATATGATAAGCTTGCAAAGATTAATGCTCAGGAGCTGTAACTTATCTGGACCTATTCCTTCTGATTTATCAGCAATGTCACAGTTGAAAACATTAGATCTAAGCTTCAACAGATTGGAGGGGAGCATTCCTGATTTGGCAGATCTGACACCCTTGCAGAACTTGTATCTAACAAGCAACTTGCTTACTGGATCTATTCCAGACTGGATCAAGAGCAGAGATAATCGCTACGAGATAGATGTTTCTTACAATAATTTTTCTGAGAGCTCTGAGTCACCTTCTTGTACAGAAAACCTGAACGTGTTCAAAAGCTTTTCTGAACGTGATAACTCATTATATGCCGAGTGCCTGAAGAGCTCTCCATGTCCAAAAGATCAGTACTCATTGCATATCAATTGTGGTGGTCAAGCAACCACCATTGGAGGAATCAACTTTGAAGCGGATCAAGACCCAGGAGGTGCAGCACATTTTATTCCTTCAGGGCCTAGCTGGGGATTCAGTAGCACTGGACATTTCTGGGATGTTAACACCACCTCTAAAGACTACATAGCAACTAATATATCTATACTCGGGATGAACAACTCTGAGTTGTACACAGATGCACGCCTCTCTCCTCTTTCTCTCACGTATTATGGACGCTGCTTCGGCAGTGGAAATTATACTGTGAAGCTTTACTTTTCAGAGATTATAATCAGAGGCAATAGATCTTTTTCTAGTCTCGGAAGACGGATATTCGATGTTTATATTCAGGAGAAGCTAGTGTTGAAGGATTTCGACATTGAAAAGGATGCCCAAGGGGTTGATAAGCCAGACGTCAAGGAATTTAAAGCAGTTGAGGTTAAGAAGAAAACTTTAGAGATCCGATTTCATTGGTCTGGGAAAGGGACAACAGCTTCCCCTAAGAGAGGAGTATATGGTCCCCTTATTTCAGCTATCTCTATAGAATCAGAGTTCAAGCCTCCTCATGATAGCAAGACATGGGTATTTATTGTGGTGGGAGCTTCGGTTTTGTGCCTCATTCTGTTGATTTTAAGCATTCTTTGGTGGAGAGGCTGTCTGGATAAGAAGACATCAAGAGAAGAAGCTCTGAGAGGACTGGATCTGCAAACTGGCTTTTTCACCTTCAAGCAAATAAAAGCTGCCACTAATAACTTTGATCCTGTAAACAAAATTGGGGAAGGTGGTTTTGGATCTGTGTACAAGGGAATACTACTGGATGGTACTATAATTGCAGTAAAGCAATTATCTGCAAAATCAAAGCAAGGAAATCGTGAATTTGTGAACGAAATAGGCATGATTTCTGGTTTACAGCATCCAAATGTCGTGAGATTGTATGGATGTTGTATTGAAGAAAATCAGTTACTTTTGGTATATGAATACATGGAGAACAATAGCCTTGCACATGCTTTGTTTGGTCCAGAGGGAGGTCCACTCAAATTGGACTGGCCTACGAGGCAGAAAATATGCATAGGCATAGCAAAAGGTCTGGCATTTTTGCATGAGGAATCAGCACTGAAGGTTGTCCACAGAGATATTAAATCTACGAATGTATTACTGGACCAAGACCTTAACGCTAAGATCTCAGACTTTGGTCTGGCCAAGCTTGACGAAGAAGAGAATACCCACATTAGCACCAGAGTTGCTGGAACTATAGGATACATGGCGCCTGAATATGCACTATGGGGTTATTTAACATACAAAGCAGATGTATACAGTTTTGGTGTTGTCGCATTGGAAATTGTTGTTGGAAAGAACAACATGAAAATTCGAGCAGATGAGAACTTTGTAGGCCTTGTGGATTGGGCCCTTGTTTTACAACAAAAAGGGAATCTAATGGAGCTGGTGGATCCAAGGCTGGGGTCCGATTTCAGCAAGGAAGAGGCAATTAGAATGGTCAAAGTAGCTCTGCTATGCACCAATCCGGCACCAGCACTTAGGCCTACGATGTCTGCAGTAGTGAGTATGCTTGAAGGGAGGAGCGTTGTTCCTGAATTGATTATGGATCCAAGTATCTATGGTGATGAGACGAGGTTGACAGCCTTGAGGGACCAGTTTGAGAAGTTTGCAGCAGAAGACAGCTCATCAAGTGGAACTCAGAGCTTCTTGCGTGGATCAGATGCAACATCGATTGGTTGTTCTGCTACTGCTACATCTTCAGATCTCTACAAAGTTAGTCCTACTTCTTAG

Protein Analysis

1010

Amino Acids

111.17

Weight (kDa)

5.64

Isoelectric Point (pI)

35.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 159 - 268 7.5e-12 Leucine-rich repeat region
Malectin PF11721 410 - 594 1.8e-35 Malectin domain
Pkinase PF00069 670 - 934 1.1e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 671 - 937 1.9e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000374)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis pycom03g10930 pycom11g14730
rosa_chinensis RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1535
AarI CACCTGC 1 cut(s) 260
AatII GACGTC 1 cut(s) 1662
Acc36I ACCTGC 1 cut(s) 260
AccB1I GGYRCC 2 cut(s) 2509, 2770
AccI GTMKAC 3 cut(s) 177, 745, 2556
AccII CGCG 1 cut(s) 406
AciI CCGC 2 cut(s) 404, 1286
AcoI YGGCCR 1 cut(s) 2442
AcsI RAATTY 3 cut(s) 1667, 2120, 2610
AcuI CTGAAG 6 cut(s) 96, 701, 1217, 1308, 2381, 2985
AcyI GRCGYC 2 cut(s) 1659, 2510
AfaI GTAC 5 cut(s) 1132, 1226, 1439, 2045, 2068
AfeI AGCGCT 1 cut(s) 126
AfiI CCNNNNNNNGG 5 cut(s) 554, 1337, 1751, 2270, 2702
AflIII ACRYGT 2 cut(s) 525, 1146
AjiI CACGTC 1 cut(s) 286
AjnI CCWGG 3 cut(s) 224, 480, 1297
AjuI GAANNNNNNNTTGG 6 cut(s) 145, 177, 2016, 2048, 2574, 2606
AloI GAACNNNNNNTCC 2 cut(s) 529, 561
Alw21I GWGCWC 2 cut(s) 1115, 1205
Alw26I GTCTC 2 cut(s) 1568, 2864
AlwNI CAGNNNCTG 2 cut(s) 539, 882
Ama87I CYCGRG 1 cut(s) 1415
Aor51HI AGCGCT 1 cut(s) 126
AoxI GGCC 9 cut(s) 204, 227, 751, 1328, 2291, 2442, 2635, 2649, 2783
ApaI GGGCCC 1 cut(s) 2653
ApeKI GCWGC 9 cut(s) 186, 221, 396, 620, 663, 1307, 1485, 1985, 2912
ApoI RAATTY 3 cut(s) 1667, 2120, 2610
AseI ATTAAT 1 cut(s) 869
Asp700I GAANNNNTTC 2 cut(s) 1148, 1616
AspLEI GCGC 2 cut(s) 127, 2512
AsuHPI GGTGA 5 cut(s) 241, 280, 1113, 1957, 2876
AvaI CYCGRG 1 cut(s) 1415
AvaII GGWCC 8 cut(s) 464, 896, 1763, 2261, 2273, 2404, 2706, 2893
BaeGI GKGCMC 1 cut(s) 2653
BalI TGGCCA 1 cut(s) 2444
BamHI GGATCC 2 cut(s) 2692, 2848
BanI GGYRCC 2 cut(s) 2509, 2770
BanII GRGCYC 3 cut(s) 1115, 1205, 2653
BauI CACGAG 1 cut(s) 196
BbsI GAAGAC 3 cut(s) 1576, 1919, 2925
Bbv12I GWGCWC 2 cut(s) 1115, 1205
BbvI GCAGC 9 cut(s) 198, 208, 408, 632, 675, 1319, 1472, 1972, 2924
BccI CCATC 2 cut(s) 266, 2057
BcgI CGANNNNNNTGC 4 cut(s) 409, 443, 2096, 2130
BciT130I CCWGG 3 cut(s) 226, 482, 1299
BciVI GTATCC 1 cut(s) 2495
BclI TGATCA 1 cut(s) 27
BcoDI GTCTC 2 cut(s) 1568, 2864
BfaI CTAG 5 cut(s) 738, 765, 1332, 1560, 1604
BfmI CTRYAG 3 cut(s) 1785, 2496, 2796
BfoI RGCGCY 2 cut(s) 128, 2513
BfuAI ACCTGC 1 cut(s) 260
BfuI GTATCC 1 cut(s) 2495
BglI GCCNNNNNGGC 1 cut(s) 2299
BglII AGATCT 5 cut(s) 943, 988, 1550, 2424, 3004
BisI GCNGC 9 cut(s) 187, 222, 397, 621, 664, 1308, 1486, 1986, 2913
BlsI GCNGC 9 cut(s) 188, 223, 398, 622, 665, 1309, 1487, 1987, 2914
BmcAI AGTACT 1 cut(s) 1226
Bme1390I CCNGG 3 cut(s) 226, 482, 1299
Bme18I GGWCC 8 cut(s) 464, 896, 1763, 2261, 2273, 2404, 2706, 2893
BmeT110I CYCGRG 1 cut(s) 1415
BmgBI CACGTC 1 cut(s) 286
BmiI GGNNCC 9 cut(s) 754, 1765, 2511, 2651, 2694, 2707, 2772, 2850, 2894
BmrFI CCNGG 3 cut(s) 226, 482, 1299
BmsI GCATC 6 cut(s) 24, 425, 1435, 1624, 2167, 2953
BoxI GACNNNNGTC 1 cut(s) 2436
BpiI GAAGAC 3 cut(s) 1576, 1919, 2925
BplI GAGNNNNNCTC 2 cut(s) 2262, 2294
Bpu10I CCTNAGC 2 cut(s) 549, 875
BpuEI CTTGAG 3 cut(s) 799, 862, 2908
Bsa29I ATCGAT 1 cut(s) 2972
BsaAI YACGTR 1 cut(s) 1473
BsaBI GATNNNNATC 1 cut(s) 1535
BsaHI GRCGYC 2 cut(s) 1659, 2510
BsaJI CCNNGG 4 cut(s) 481, 1297, 1639, 2696
BsaXI ACNNNNNCTCC 6 cut(s) 529, 559, 1836, 1866, 1885, 1915
Bsc4I CCNNNNNNNGG 5 cut(s) 554, 1337, 1751, 2270, 2702
Bse118I RCCGGY 1 cut(s) 616
Bse3DI GCAATG 3 cut(s) 196, 927, 1229
Bse8I GATNNNNATC 1 cut(s) 1535
BseBI CCWGG 3 cut(s) 226, 482, 1299
BseCI ATCGAT 1 cut(s) 2972
BseDI CCNNGG 4 cut(s) 481, 1297, 1639, 2696
BseGI GGATG 6 cut(s) 1372, 1425, 1639, 2068, 2158, 2189
BseJI GATNNNNATC 1 cut(s) 1535
BseLI CCNNNNNNNGG 5 cut(s) 554, 1337, 1751, 2270, 2702
BseMI GCAATG 3 cut(s) 196, 927, 1229
BseRI GAGGAG 4 cut(s) 1449, 1767, 1797, 2836
BseSI GKGCMC 1 cut(s) 2653
BseXI GCAGC 9 cut(s) 198, 208, 408, 632, 675, 1319, 1472, 1972, 2924
BseYI CCCAGC 3 cut(s) 201, 1335, 2701
BsgI GTGCAG 1 cut(s) 1326
Bsh1236I CGCG 1 cut(s) 406
BshFI GGCC 9 cut(s) 206, 229, 753, 1330, 2293, 2444, 2637, 2651, 2785
BshNI GGYRCC 2 cut(s) 2509, 2770
BshVI ATCGAT 1 cut(s) 2972
BsiHKAI GWGCWC 2 cut(s) 1115, 1205
BsiHKCI CYCGRG 1 cut(s) 1415
BsiSI CCGG 2 cut(s) 617, 2768
BslFI GGGAC 3 cut(s) 1744, 1749, 2906
BslI CCNNNNNNNGG 5 cut(s) 554, 1337, 1751, 2270, 2702
BsmAI GTCTC 2 cut(s) 1568, 2864
BsmBI CGTCTC 1 cut(s) 2864
BsmFI GGGAC 3 cut(s) 1744, 1749, 2906
BsmI GAATGC 3 cut(s) 690, 972, 1881
BsnI GGCC 9 cut(s) 206, 229, 753, 1330, 2293, 2444, 2637, 2651, 2785
BsoBI CYCGRG 1 cut(s) 1415
Bsp120I GGGCCC 1 cut(s) 2649
Bsp1286I GDGCHC 3 cut(s) 1115, 1205, 2653
Bsp1407I TGTACA 3 cut(s) 1130, 1437, 2043
BspACI CCGC 2 cut(s) 404, 1286
BspANI GGCC 9 cut(s) 206, 229, 753, 1330, 2293, 2444, 2637, 2651, 2785
BspDI ATCGAT 1 cut(s) 2972
BspFNI CGCG 1 cut(s) 406
BspHI TCATGA 3 cut(s) 30, 39, 1810
BspLI GGNNCC 9 cut(s) 754, 1765, 2511, 2651, 2694, 2707, 2772, 2850, 2894
BspMAI CTGCAG 1 cut(s) 2800
BspMI ACCTGC 1 cut(s) 260
BspQI GCTCTTC 1 cut(s) 1193
BspT107I GGYRCC 2 cut(s) 2509, 2770
BsrDI GCAATG 3 cut(s) 196, 927, 1229
BsrFI RCCGGY 1 cut(s) 616
BsrGI TGTACA 3 cut(s) 1130, 1437, 2043
BssAI RCCGGY 1 cut(s) 616
BssECI CCNNGG 4 cut(s) 481, 1297, 1639, 2696
BssNAI GTATAC 1 cut(s) 2557
BssNI GRCGYC 2 cut(s) 1659, 2510
BssSI CACGAG 1 cut(s) 196
BssT1I CCWWGG 2 cut(s) 1639, 2696
Bst1107I GTATAC 1 cut(s) 2557
Bst2BI CACGAG 1 cut(s) 196
Bst2UI CCWGG 3 cut(s) 226, 482, 1299
Bst4CI ACNGT 8 cut(s) 93, 247, 336, 448, 541, 930, 1510, 2561
Bst6I CTCTTC 3 cut(s) 1193, 2454, 2718
BstACI GRCGYC 2 cut(s) 1659, 2510
BstAPI GCANNNNNTGC 1 cut(s) 95
BstAUI TGTACA 3 cut(s) 1130, 1437, 2043
BstBAI YACGTR 1 cut(s) 1473
BstC8I GCNNGC 4 cut(s) 280, 618, 860, 1450
BstENI CCTNNNNNAGG 1 cut(s) 1749
BstF5I GGATG 6 cut(s) 1372, 1425, 1639, 2068, 2158, 2189
BstFNI CGCG 1 cut(s) 406
BstH2I RGCGCY 2 cut(s) 128, 2513
BstHHI GCGC 2 cut(s) 127, 2512
BstMAI GTCTC 2 cut(s) 1568, 2864
BstMWI GCNNNNNNNGC 5 cut(s) 63, 95, 1200, 1491, 2299
BstNI CCWGG 3 cut(s) 226, 482, 1299
BstNSI RCATGY 3 cut(s) 282, 529, 2252
BstPAI GACNNNNGTC 1 cut(s) 2436
BstSCI CCNGG 3 cut(s) 224, 480, 1297
BstSFI CTRYAG 3 cut(s) 1785, 2496, 2796
BstSLI GKGCMC 1 cut(s) 2653
BstUI CGCG 1 cut(s) 406
BstV1I GCAGC 9 cut(s) 198, 208, 408, 632, 675, 1319, 1472, 1972, 2924
BstV2I GAAGAC 3 cut(s) 1576, 1919, 2925
BstXI CCANNNNNNTGG 1 cut(s) 740
BstZ17I GTATAC 1 cut(s) 2557
Bsu15I ATCGAT 1 cut(s) 2972
BsuI GTATCC 1 cut(s) 2495
BsuRI GGCC 9 cut(s) 206, 229, 753, 1330, 2293, 2444, 2637, 2651, 2785
BsuTUI ATCGAT 1 cut(s) 2972
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 6 cut(s) 1372, 1425, 1639, 2068, 2158, 2189
BtsI GCAGTG 1 cut(s) 1501
BtsIMutI CAGTG 5 cut(s) 243, 675, 1350, 1501, 2357
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 4 cut(s) 280, 618, 860, 1450
CaiI CAGNNNCTG 2 cut(s) 539, 882
CciI TCATGA 3 cut(s) 30, 39, 1810
CfoI GCGC 2 cut(s) 127, 2512
Cfr10I RCCGGY 1 cut(s) 616
ClaI ATCGAT 1 cut(s) 2972
CseI GACGC 2 cut(s) 163, 1491
Csp6I GTAC 5 cut(s) 1131, 1225, 1438, 2044, 2067
CspCI CAANNNNNGTGG 4 cut(s) 1228, 1263, 2265, 2300
CviQI GTAC 5 cut(s) 1131, 1225, 1438, 2044, 2067
DinI GGCGCC 1 cut(s) 2511
DraI TTTAAA 1 cut(s) 1672
EaeI YGGCCR 1 cut(s) 2442
Eam1104I CTCTTC 3 cut(s) 1193, 2454, 2718
EarI CTCTTC 3 cut(s) 1193, 2454, 2718
Ecl136II GAGCTC 2 cut(s) 1113, 1203
Eco130I CCWWGG 2 cut(s) 1639, 2696
Eco147I AGGCCT 3 cut(s) 229, 2637, 2785
Eco24I GRGCYC 3 cut(s) 1115, 1205, 2653
Eco47I GGWCC 8 cut(s) 464, 896, 1763, 2261, 2273, 2404, 2706, 2893
Eco47III AGCGCT 1 cut(s) 126
Eco53kI GAGCTC 2 cut(s) 1113, 1203
Eco57I CTGAAG 6 cut(s) 96, 701, 1217, 1308, 2381, 2985
Eco88I CYCGRG 1 cut(s) 1415
EcoICRI GAGCTC 2 cut(s) 1113, 1203
EcoNI CCTNNNNNAGG 1 cut(s) 1749
EcoO109I RGGNCCY 3 cut(s) 752, 1328, 2650
EcoRII CCWGG 3 cut(s) 224, 480, 1297
EcoT14I CCWWGG 2 cut(s) 1639, 2696
EcoT22I ATGCAT 2 cut(s) 68, 2315
EcoT38I GRGCYC 3 cut(s) 1115, 1205, 2653
EgeI GGCGCC 1 cut(s) 2511
EheI GGCGCC 1 cut(s) 2511
ErhI CCWWGG 2 cut(s) 1639, 2696
Esp3I CGTCTC 1 cut(s) 2864
FalI AAGNNNNNCTT 2 cut(s) 1505, 1537
FaqI GGGAC 3 cut(s) 1744, 1749, 2906
FauNDI CATATG 1 cut(s) 62
FbaI TGATCA 1 cut(s) 27
FblI GTMKAC 3 cut(s) 177, 745, 2556
Fnu4HI GCNGC 9 cut(s) 187, 222, 397, 621, 664, 1308, 1486, 1986, 2913
FokI GGATG 6 cut(s) 1379, 1432, 1646, 2075, 2145, 2196
FriOI GRGCYC 3 cut(s) 1115, 1205, 2653
Fsp4HI GCNGC 9 cut(s) 187, 222, 397, 621, 664, 1308, 1486, 1986, 2913
FspBI CTAG 5 cut(s) 738, 765, 1332, 1560, 1604
GlaI GCGC 2 cut(s) 126, 2511
GluI GCNGC 9 cut(s) 187, 222, 397, 621, 664, 1308, 1486, 1986, 2913
GsaI CCCAGC 3 cut(s) 205, 1339, 2705
HaeII RGCGCY 2 cut(s) 128, 2513
HaeIII GGCC 9 cut(s) 206, 229, 753, 1330, 2293, 2444, 2637, 2651, 2785
HapII CCGG 2 cut(s) 617, 2768
HgaI GACGC 2 cut(s) 163, 1491
HhaI GCGC 2 cut(s) 127, 2512
Hin1I GRCGYC 2 cut(s) 1659, 2510
Hin6I GCGC 2 cut(s) 125, 2510
HinP1I GCGC 2 cut(s) 125, 2510
HincII GTYRAC 5 cut(s) 178, 568, 645, 1372, 2880
HindII GTYRAC 5 cut(s) 178, 568, 645, 1372, 2880
HindIII AAGCTT 5 cut(s) 856, 949, 1156, 1514, 2447
HinfI GANTC 9 cut(s) 577, 631, 709, 1118, 1272, 1341, 1790, 2351, 2674
HpaI GTTAAC 3 cut(s) 568, 645, 1372
HpaII CCGG 2 cut(s) 617, 2768
HphI GGTGA 5 cut(s) 241, 280, 1113, 1957, 2876
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 9 cut(s) 274, 915, 1134, 1332, 1606, 1978, 2018, 2356, 2810
HpyCH4III ACNGT 8 cut(s) 93, 247, 336, 448, 541, 930, 1510, 2561
HpyCH4IV ACGT 5 cut(s) 285, 1146, 1168, 1472, 1659
HpyF10VI GCNNNNNNNGC 5 cut(s) 63, 95, 1200, 1491, 2299
HpySE526I ACGT 5 cut(s) 285, 1146, 1168, 1472, 1659
Hsp92I GRCGYC 2 cut(s) 1659, 2510
HspAI GCGC 2 cut(s) 125, 2510
KasI GGCGCC 1 cut(s) 2509
KroI GCCGGC 1 cut(s) 616
KroNI GCCGGC 1 cut(s) 618
Ksp22I TGATCA 1 cut(s) 27
KspAI GTTAAC 3 cut(s) 568, 645, 1372
LguI GCTCTTC 1 cut(s) 1193
LmnI GCTCC 6 cut(s) 266, 879, 969, 1844, 2683, 2823
Lsp1109I GCAGC 9 cut(s) 198, 208, 408, 632, 675, 1319, 1472, 1972, 2924
LweI GCATC 6 cut(s) 24, 425, 1435, 1624, 2167, 2953
MaeI CTAG 5 cut(s) 738, 765, 1332, 1560, 1604
MaeII ACGT 5 cut(s) 285, 1146, 1168, 1472, 1659
MaeIII GTNAC 7 cut(s) 247, 286, 348, 884, 924, 1119, 2205
MfeI CAATTG 1 cut(s) 1240
MhlI GDGCHC 3 cut(s) 1115, 1205, 2653
MlsI TGGCCA 1 cut(s) 2444
MluNI TGGCCA 1 cut(s) 2444
Mly113I GGCGCC 1 cut(s) 2510
MlyI GAGTC 1 cut(s) 1127
MmeI TCCRAC 2 cut(s) 686, 2572
Mox20I TGGCCA 1 cut(s) 2444
Mph1103I ATGCAT 2 cut(s) 68, 2315
MroNI GCCGGC 1 cut(s) 616
MroXI GAANNNNTTC 2 cut(s) 1148, 1616
MscI TGGCCA 1 cut(s) 2444
MslI CAYNNNNRTG 2 cut(s) 446, 2163
Msp20I TGGCCA 1 cut(s) 2444
MspI CCGG 2 cut(s) 617, 2768
MspR9I CCNGG 3 cut(s) 226, 482, 1299
MunI CAATTG 1 cut(s) 1240
Mva1269I GAATGC 3 cut(s) 690, 972, 1881
MvaI CCWGG 3 cut(s) 226, 482, 1299
MvnI CGCG 1 cut(s) 406
MwoI GCNNNNNNNGC 5 cut(s) 63, 95, 1200, 1491, 2299
NaeI GCCGGC 1 cut(s) 618
NarI GGCGCC 1 cut(s) 2510
NdeI CATATG 1 cut(s) 62
NgoMIV GCCGGC 1 cut(s) 616
NlaIV GGNNCC 9 cut(s) 754, 1765, 2511, 2651, 2694, 2707, 2772, 2850, 2894
NmeAIII GCCGAG 1 cut(s) 1213
NmuCI GTSAC 4 cut(s) 247, 286, 924, 1119
NsiI ATGCAT 2 cut(s) 68, 2315
NspI RCATGY 3 cut(s) 282, 529, 2252
PaeI GCATGC 1 cut(s) 282
PagI TCATGA 3 cut(s) 30, 39, 1810
PaqCI CACCTGC 1 cut(s) 260
PceI AGGCCT 3 cut(s) 229, 2637, 2785
PciI ACATGT 1 cut(s) 525
PciSI GCTCTTC 1 cut(s) 1193
PctI GAATGC 3 cut(s) 690, 972, 1881
PdiI GCCGGC 1 cut(s) 618
PdmI GAANNNNTTC 2 cut(s) 1148, 1616
PfeI GAWTC 8 cut(s) 577, 631, 709, 1272, 1341, 1790, 2351, 2674
PkrI GCNGC 9 cut(s) 188, 223, 398, 622, 665, 1309, 1487, 1987, 2914
PleI GAGTC 1 cut(s) 1126
PluTI GGCGCC 1 cut(s) 2513
PpsI GAGTC 1 cut(s) 1126
Ppu21I YACGTR 1 cut(s) 1473
PscI ACATGT 1 cut(s) 525
PshAI GACNNNNGTC 1 cut(s) 2436
PshBI ATTAAT 1 cut(s) 869
PsiI TTATAA 1 cut(s) 1535
Psp124BI GAGCTC 2 cut(s) 1115, 1205
Psp6I CCWGG 3 cut(s) 224, 480, 1297
PspFI CCCAGC 3 cut(s) 201, 1335, 2701
PspGI CCWGG 3 cut(s) 224, 480, 1297
PspN4I GGNNCC 9 cut(s) 754, 1765, 2511, 2651, 2694, 2707, 2772, 2850, 2894
PspOMI GGGCCC 1 cut(s) 2649
PstI CTGCAG 1 cut(s) 2800
PstNI CAGNNNCTG 2 cut(s) 539, 882
RsaI GTAC 5 cut(s) 1132, 1226, 1439, 2045, 2068
RsaNI GTAC 5 cut(s) 1131, 1225, 1438, 2044, 2067
RseI CAYNNNNRTG 2 cut(s) 446, 2163
SacI GAGCTC 2 cut(s) 1115, 1205
SalI GTCGAC 1 cut(s) 176
SapI GCTCTTC 1 cut(s) 1193
SatI GCNGC 9 cut(s) 187, 222, 397, 621, 664, 1308, 1486, 1986, 2913
ScaI AGTACT 1 cut(s) 1226
SchI GAGTC 1 cut(s) 1127
ScrFI CCNGG 3 cut(s) 226, 482, 1299
SduI GDGCHC 3 cut(s) 1115, 1205, 2653
SfaNI GCATC 6 cut(s) 24, 425, 1435, 1624, 2167, 2953
SfcI CTRYAG 3 cut(s) 1785, 2496, 2796
SfoI GGCGCC 1 cut(s) 2511
SinI GGWCC 8 cut(s) 464, 896, 1763, 2261, 2273, 2404, 2706, 2893
SmiMI CAYNNNNRTG 2 cut(s) 446, 2163
SmlI CTYRAG 3 cut(s) 778, 841, 2887
SmoI CTYRAG 3 cut(s) 778, 841, 2887
SphI GCATGC 1 cut(s) 282
SseBI AGGCCT 3 cut(s) 229, 2637, 2785
SsiI CCGC 2 cut(s) 404, 1286
SspDI GGCGCC 1 cut(s) 2509
SspMI CTAG 5 cut(s) 738, 765, 1332, 1560, 1604
SstI GAGCTC 2 cut(s) 1115, 1205
StuI AGGCCT 3 cut(s) 229, 2637, 2785
StyD4I CCNGG 3 cut(s) 224, 480, 1297
StyI CCWWGG 2 cut(s) 1639, 2696
TaaI ACNGT 8 cut(s) 93, 247, 336, 448, 541, 930, 1510, 2561
TaiI ACGT 5 cut(s) 288, 1149, 1171, 1475, 1662
TaqI TCGA 7 cut(s) 177, 369, 419, 1581, 1620, 2614, 2972
TatI WGTACW 4 cut(s) 1130, 1224, 1437, 2043
TfiI GAWTC 8 cut(s) 577, 631, 709, 1272, 1341, 1790, 2351, 2674
TscAI CASTG 5 cut(s) 250, 682, 1357, 1501, 2364
TseFI GTSAC 4 cut(s) 247, 286, 924, 1119
TseI GCWGC 9 cut(s) 186, 221, 396, 620, 663, 1307, 1485, 1985, 2912
Tsp45I GTSAC 4 cut(s) 247, 286, 924, 1119
TspDTI ATGAA 7 cut(s) 17, 49, 644, 1436, 1703, 2235, 2621
TspGWI ACGGA 1 cut(s) 1588
TspRI CASTG 5 cut(s) 250, 682, 1357, 1501, 2364
VpaK11BI GGWCC 8 cut(s) 464, 896, 1763, 2261, 2273, 2404, 2706, 2893
VspI ATTAAT 1 cut(s) 869
XagI CCTNNNNNAGG 1 cut(s) 1749
XapI RAATTY 3 cut(s) 1667, 2120, 2610
XceI RCATGY 3 cut(s) 282, 529, 2252
XmiI GTMKAC 3 cut(s) 177, 745, 2556
XmnI GAANNNNTTC 2 cut(s) 1148, 1616
XspI CTAG 5 cut(s) 738, 765, 1332, 1560, 1604
ZraI GACGTC 1 cut(s) 1660
ZrmI AGTACT 1 cut(s) 1226
Zsp2I ATGCAT 2 cut(s) 68, 2315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.