MD03G1155200.v1.1

aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
17835181 .. 17837669
2489 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1155200.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGGTCTCTTCAAATCATGAGAATGCTAAAGAATCCCCAGCCTTGCCCAAAAGACAAAGGGGAAAAATAGTTGGATTTGCCTTGAGGCTGAAGGAACTAGGAAAGGATGACCCAAGAAAGATTATTCATTCTTTTAAAGTGGGACTAGCTCTCACTTTGGTGTCACTCTTCTACTATTTTAAACCACTCTATGAAGGTTTTGGTCTTGCTGCAATGTGGGCTATTTTAACTGTTGTGGTTGTGTTTGAATTTTCTGTTGGAGCAACACTAGGAAGAGGTTTGAATAGAATGTTGGCAACTTTAACAGCTGGTGCTCTTGGCATTGGGGCTCATCGCTTAGCAACTCTTTCTGGAGAAACAGGGGAGCCTATACTAGTTGCTCTCTTTGTTTTTATAATAGCTGGAATAGTGACATTCCTGAGATTCATTCCCCAAATTAAGGCGAGGTATGATTATGGAATGCTGGTATTCATATTGACATTCTGCTTGATTTCGGTGTCTGGTTATCGGGATGAAGAGGTGATAGAAATGGGATTTGAGAGGCTATCTTCAATAGTCCTTGGAAGCTGTGCTTCTGTAGTTGTATGCACTTTCATATGTCCGGTATGGATTGGGGTGGATCTTCACAATCAGATTGCTACCAACATCGAAAAGCTTGGGATTTTCTTAGAAGGATTTGGAGATGAATACTTTAAAATATCTGAGGATGGACAGCCTATAAACAAGTCATCATCTCTTCAGCGATATAAAAGTGTTCTAACTTCAGGTAGCAAGGAAGAAAGCATGGCCAATTTGGCAAGATGGGAACCATGCCACGGAAAGTTCAGATTTCGTCATCCATGGAAAGAGTACCTGAAAGTTGGGAATGTAACTCGCCAATGCGCTTTCAAAATTGAATCTCTCAACAACTACCTGACCTCTGAGATCCAATCACCACCAGAAGTTCGAAATATAATTAAAGGGGAATGCACAGTTATTAGCTCAGAATGTGGGAAAGCATTGAAGGAACTAACATCTGTGATCCGAAAAATGACTGAATCATCAGCAGCAGAACTTCACATTACAAACTCAAAAGCAGCTGCTGAAAAGCTCAAATCTGTAATCAGATCAAGTTTGTGTAAACATGGAGATTACCTAGAGATAATACAAGCTGGAGCAGTAGCTTCTCTACTGTTTGAAGTTGTCAAATGTACAGAGGAAGTTGCTGATGCTGCTCAAAAACTAGCATCCCTAGCACATTTTAAGAATGCTAAGCCTAGAGTAACCCCAGAGAAGCAAGAATTACCTTCACAAGAAGCTGTAAAGCAAGTATCAGGCATCAATGGGGCACATCATGTTATAACGATAAATTTGTCTCAAAGTTTACCCGGAAGTGAGAATTCGTCCCCACCAGTACTGGCTCCAAGAATTGAATTGTGCACTTTGGGATGA

Protein Analysis

477

Amino Acids

52.2

Weight (kDa)

8.73

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 32 - 370 3.6e-144 Aluminium activated malate transporter
FUSC_2 PF13515 71 - 195 4e-09 Fusaric acid resistance protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000374)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis pycom03g10930 pycom11g14730
rosa_chinensis RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 395, 1340
AclWI GGATC 3 cut(s) 627, 919, 1015
AcoI YGGCCR 1 cut(s) 786
AcsI RAATTY 3 cut(s) 248, 1348, 1378
AcuI CTGAAG 3 cut(s) 110, 722, 747
AfaI GTAC 3 cut(s) 851, 1192, 1395
AfiI CCNNNNNNNGG 2 cut(s) 439, 815
AgsI TTSAA 9 cut(s) 12, 248, 283, 552, 889, 896, 1003, 1178, 1412
AhlI ACTAGT 1 cut(s) 373
AjuI GAANNNNNNNTTGG 4 cut(s) 240, 272, 275, 307
AleI CACNNNNGTG 1 cut(s) 158
Alw21I GWGCWC 2 cut(s) 316, 1421
Alw26I GTCTC 2 cut(s) 10, 1359
Alw44I GTGCAC 1 cut(s) 1417
AlwI GGATC 3 cut(s) 627, 919, 1015
AlwNI CAGNNNCTG 1 cut(s) 1082
AoxI GGCC 1 cut(s) 786
ApaLI GTGCAC 1 cut(s) 1417
ApeKI GCWGC 5 cut(s) 209, 1046, 1076, 1079, 1211
ApoI RAATTY 3 cut(s) 248, 1348, 1378
AspLEI GCGC 1 cut(s) 884
AsuC2I CCSGG 1 cut(s) 1368
AsuHPI GGTGA 2 cut(s) 532, 924
AsuII TTCGAA 1 cut(s) 946
BaeGI GKGCMC 2 cut(s) 1330, 1421
BalI TGGCCA 1 cut(s) 788
BanII GRGCYC 1 cut(s) 331
Bbv12I GWGCWC 2 cut(s) 316, 1421
BbvI GCAGC 5 cut(s) 196, 1058, 1066, 1088, 1198
BccI CCATC 2 cut(s) 701, 795
BcnI CCSGG 1 cut(s) 1368
BcoDI GTCTC 2 cut(s) 10, 1359
BcuI ACTAGT 1 cut(s) 373
BfaI CTAG 8 cut(s) 98, 146, 269, 374, 1136, 1223, 1232, 1257
BfmI CTRYAG 1 cut(s) 576
BglI GCCNNNNNGGC 1 cut(s) 794
BisI GCNGC 5 cut(s) 210, 1047, 1077, 1080, 1212
BlpI GCTNAGC 2 cut(s) 337, 1251
BlsI GCNGC 5 cut(s) 211, 1048, 1078, 1081, 1213
BmcAI AGTACT 1 cut(s) 1395
Bme1390I CCNGG 1 cut(s) 1368
BmiI GGNNCC 3 cut(s) 366, 807, 1401
BmrFI CCNGG 1 cut(s) 1368
BmsI GCATC 3 cut(s) 1198, 1235, 1326
BpmI CTGGAG 2 cut(s) 372, 1173
Bpu1102I GCTNAGC 2 cut(s) 337, 1251
Bpu14I TTCGAA 1 cut(s) 946
BpuEI CTTGAG 1 cut(s) 103
BpuMI CCSGG 1 cut(s) 1368
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 3 cut(s) 559, 814, 839
BsaWI WCCGGW 1 cut(s) 601
Bsc4I CCNNNNNNNGG 2 cut(s) 439, 815
Bse1I ACTGG 2 cut(s) 1391, 1401
Bse3DI GCAATG 1 cut(s) 219
BseDI CCNNGG 3 cut(s) 559, 814, 839
BseGI GGATG 5 cut(s) 112, 517, 712, 835, 1226
BseLI CCNNNNNNNGG 2 cut(s) 439, 815
BseMI GCAATG 1 cut(s) 219
BseMII CTCAG 4 cut(s) 410, 693, 912, 996
BseNI ACTGG 2 cut(s) 1391, 1401
BseSI GKGCMC 2 cut(s) 1330, 1421
BseXI GCAGC 5 cut(s) 196, 1058, 1066, 1088, 1198
BseYI CCCAGC 1 cut(s) 37
BshFI GGCC 1 cut(s) 788
BsiHKAI GWGCWC 2 cut(s) 316, 1421
BsiSI CCGG 2 cut(s) 602, 1368
BslFI GGGAC 2 cut(s) 156, 1369
BslI CCNNNNNNNGG 2 cut(s) 439, 815
BsmAI GTCTC 2 cut(s) 10, 1359
BsmFI GGGAC 2 cut(s) 156, 1369
BsmI GAATGC 4 cut(s) 28, 465, 971, 1252
BsnI GGCC 1 cut(s) 788
Bso31I GGTCTC 1 cut(s) 10
Bsp119I TTCGAA 1 cut(s) 946
Bsp1286I GDGCHC 4 cut(s) 316, 331, 1330, 1421
Bsp1407I TGTACA 1 cut(s) 1190
Bsp143I GATC 4 cut(s) 619, 924, 1020, 1106
Bsp1720I GCTNAGC 2 cut(s) 337, 1251
Bsp19I CCATGG 1 cut(s) 839
BspANI GGCC 1 cut(s) 788
BspCNI CTCAG 4 cut(s) 411, 694, 913, 995
BspHI TCATGA 1 cut(s) 16
BspLI GGNNCC 3 cut(s) 366, 807, 1401
BspPI GGATC 3 cut(s) 627, 919, 1015
BspT104I TTCGAA 1 cut(s) 946
BspTNI GGTCTC 1 cut(s) 10
BsrDI GCAATG 1 cut(s) 219
BsrGI TGTACA 1 cut(s) 1190
BsrI ACTGG 2 cut(s) 1391, 1401
BssECI CCNNGG 3 cut(s) 559, 814, 839
BssMI GATC 4 cut(s) 619, 924, 1020, 1106
BssT1I CCWWGG 2 cut(s) 559, 839
Bst4CI ACNGT 3 cut(s) 232, 973, 1173
Bst6I CTCTTC 5 cut(s) 13, 173, 268, 510, 741
BstAUI TGTACA 1 cut(s) 1190
BstBI TTCGAA 1 cut(s) 946
BstDEI CTNAG 7 cut(s) 337, 419, 667, 702, 921, 982, 1251
BstDSI CCRYGG 2 cut(s) 814, 839
BstF5I GGATG 5 cut(s) 112, 517, 712, 835, 1226
BstHHI GCGC 1 cut(s) 884
BstKTI GATC 4 cut(s) 622, 927, 1023, 1109
BstMAI GTCTC 2 cut(s) 10, 1359
BstMBI GATC 4 cut(s) 619, 924, 1020, 1106
BstMWI GCNNNNNNNGC 4 cut(s) 218, 794, 1211, 1232
BstSCI CCNGG 1 cut(s) 1366
BstSFI CTRYAG 1 cut(s) 576
BstSLI GKGCMC 2 cut(s) 1330, 1421
BstV1I GCAGC 5 cut(s) 196, 1058, 1066, 1088, 1198
BstX2I RGATCY 2 cut(s) 619, 924
BstYI RGATCY 2 cut(s) 619, 924
BsuRI GGCC 1 cut(s) 788
BtgI CCRYGG 2 cut(s) 814, 839
BtgZI GCGATG 1 cut(s) 317
BtsCI GGATG 5 cut(s) 112, 517, 712, 835, 1226
CaiI CAGNNNCTG 1 cut(s) 1082
CciI TCATGA 1 cut(s) 16
CfoI GCGC 1 cut(s) 884
Csp6I GTAC 3 cut(s) 850, 1191, 1394
CviAII CATG 6 cut(s) 17, 784, 810, 840, 1124, 1334
CviQI GTAC 3 cut(s) 850, 1191, 1394
DdeI CTNAG 7 cut(s) 337, 419, 667, 702, 921, 982, 1251
DpnI GATC 4 cut(s) 621, 926, 1022, 1108
DpnII GATC 4 cut(s) 619, 924, 1020, 1106
DraI TTTAAA 3 cut(s) 136, 181, 694
EaeI YGGCCR 1 cut(s) 786
Eam1104I CTCTTC 5 cut(s) 13, 173, 268, 510, 741
EarI CTCTTC 5 cut(s) 13, 173, 268, 510, 741
Eco130I CCWWGG 2 cut(s) 559, 839
Eco24I GRGCYC 1 cut(s) 331
Eco31I GGTCTC 1 cut(s) 10
Eco57I CTGAAG 3 cut(s) 110, 722, 747
EcoRI GAATTC 1 cut(s) 1378
EcoT14I CCWWGG 2 cut(s) 559, 839
EcoT38I GRGCYC 1 cut(s) 331
ErhI CCWWGG 2 cut(s) 559, 839
FaeI CATG 6 cut(s) 20, 787, 813, 843, 1127, 1337
FalI AAGNNNNNCTT 2 cut(s) 556, 588
FaqI GGGAC 2 cut(s) 156, 1369
FatI CATG 6 cut(s) 16, 783, 809, 839, 1123, 1333
FauNDI CATATG 1 cut(s) 596
Fnu4HI GCNGC 5 cut(s) 210, 1047, 1077, 1080, 1212
FokI GGATG 5 cut(s) 119, 524, 719, 822, 1213
FriOI GRGCYC 1 cut(s) 331
Fsp4HI GCNGC 5 cut(s) 210, 1047, 1077, 1080, 1212
FspBI CTAG 8 cut(s) 98, 146, 269, 374, 1136, 1223, 1232, 1257
GlaI GCGC 1 cut(s) 883
GluI GCNGC 5 cut(s) 210, 1047, 1077, 1080, 1212
GsaI CCCAGC 1 cut(s) 41
GsuI CTGGAG 2 cut(s) 372, 1173
HaeIII GGCC 1 cut(s) 788
HapII CCGG 2 cut(s) 602, 1368
HhaI GCGC 1 cut(s) 884
Hin1II CATG 6 cut(s) 20, 787, 813, 843, 1127, 1337
Hin6I GCGC 1 cut(s) 882
HinP1I GCGC 1 cut(s) 882
HindIII AAGCTT 1 cut(s) 653
HinfI GANTC 4 cut(s) 32, 423, 896, 1037
HpaII CCGG 2 cut(s) 602, 1368
HphI GGTGA 2 cut(s) 532, 924
Hpy166II GTNNAC 3 cut(s) 1121, 1364, 1419
Hpy188I TCNGA 7 cut(s) 633, 703, 827, 922, 985, 1025, 1106
Hpy188III TCNNGA 4 cut(s) 17, 351, 418, 509
Hpy8I GTNNAC 3 cut(s) 1121, 1364, 1419
HpyAV CCTTC 5 cut(s) 85, 188, 665, 997, 1296
HpyCH4III ACNGT 3 cut(s) 232, 973, 1173
HpyCH4V TGCA 4 cut(s) 212, 588, 969, 1419
HpyF10VI GCNNNNNNNGC 4 cut(s) 218, 794, 1211, 1232
HpyF3I CTNAG 7 cut(s) 337, 419, 667, 702, 921, 982, 1251
Hsp92II CATG 6 cut(s) 20, 787, 813, 843, 1127, 1337
HspAI GCGC 1 cut(s) 882
Kzo9I GATC 4 cut(s) 619, 924, 1020, 1106
LmnI GCTCC 4 cut(s) 260, 364, 1154, 1405
Lsp1109I GCAGC 5 cut(s) 196, 1058, 1066, 1088, 1198
LweI GCATC 3 cut(s) 1198, 1235, 1326
MaeI CTAG 8 cut(s) 98, 146, 269, 374, 1136, 1223, 1232, 1257
MaeIII GTNAC 4 cut(s) 162, 409, 868, 1261
MalI GATC 4 cut(s) 621, 926, 1022, 1108
MboI GATC 4 cut(s) 619, 924, 1020, 1106
MboII GAAGA 7 cut(s) 160, 285, 527, 540, 614, 728, 788
MflI RGATCY 2 cut(s) 619, 924
MhlI GDGCHC 4 cut(s) 316, 331, 1330, 1421
MlsI TGGCCA 1 cut(s) 788
MluNI TGGCCA 1 cut(s) 788
MmeI TCCRAC 2 cut(s) 52, 238
MnlI CCTC 8 cut(s) 78, 269, 438, 511, 534, 697, 928, 1189
Mox20I TGGCCA 1 cut(s) 788
MscI TGGCCA 1 cut(s) 788
MseI TTAA 8 cut(s) 135, 180, 227, 302, 438, 693, 957, 1242
MslI CAYNNNNRTG 2 cut(s) 21, 158
Msp20I TGGCCA 1 cut(s) 788
MspA1I CMGCKG 2 cut(s) 308, 1079
MspI CCGG 2 cut(s) 602, 1368
MspR9I CCNGG 1 cut(s) 1368
Mva1269I GAATGC 4 cut(s) 28, 465, 971, 1252
MwoI GCNNNNNNNGC 4 cut(s) 218, 794, 1211, 1232
NciI CCSGG 1 cut(s) 1368
NcoI CCATGG 1 cut(s) 839
NdeI CATATG 1 cut(s) 596
NdeII GATC 4 cut(s) 619, 924, 1020, 1106
NlaIII CATG 6 cut(s) 20, 787, 813, 843, 1127, 1337
NlaIV GGNNCC 3 cut(s) 366, 807, 1401
NmuCI GTSAC 2 cut(s) 162, 409
NspV TTCGAA 1 cut(s) 946
OliI CACNNNNGTG 1 cut(s) 158
PagI TCATGA 1 cut(s) 16
PctI GAATGC 4 cut(s) 28, 465, 971, 1252
PfeI GAWTC 4 cut(s) 32, 423, 896, 1037
PkrI GCNGC 5 cut(s) 211, 1048, 1078, 1081, 1213
PsiI TTATAA 2 cut(s) 395, 1340
PspFI CCCAGC 1 cut(s) 37
PspN4I GGNNCC 3 cut(s) 366, 807, 1401
PstNI CAGNNNCTG 1 cut(s) 1082
PsuI RGATCY 2 cut(s) 619, 924
PvuII CAGCTG 2 cut(s) 308, 1079
RsaI GTAC 3 cut(s) 851, 1192, 1395
RsaNI GTAC 3 cut(s) 850, 1191, 1394
RseI CAYNNNNRTG 2 cut(s) 21, 158
SaqAI TTAA 8 cut(s) 135, 180, 227, 302, 438, 693, 957, 1242
SatI GCNGC 5 cut(s) 210, 1047, 1077, 1080, 1212
Sau3AI GATC 4 cut(s) 619, 924, 1020, 1106
ScaI AGTACT 1 cut(s) 1395
ScrFI CCNGG 1 cut(s) 1368
SduI GDGCHC 4 cut(s) 316, 331, 1330, 1421
SfaNI GCATC 3 cut(s) 1198, 1235, 1326
SfcI CTRYAG 1 cut(s) 576
SfuI TTCGAA 1 cut(s) 946
SmiMI CAYNNNNRTG 2 cut(s) 21, 158
SmlI CTYRAG 1 cut(s) 82
SmoI CTYRAG 1 cut(s) 82
SpeI ACTAGT 1 cut(s) 373
SspMI CTAG 8 cut(s) 98, 146, 269, 374, 1136, 1223, 1232, 1257
StyD4I CCNGG 1 cut(s) 1366
StyI CCWWGG 2 cut(s) 559, 839
TaaI ACNGT 3 cut(s) 232, 973, 1173
TaqI TCGA 2 cut(s) 648, 946
TatI WGTACW 2 cut(s) 1190, 1393
TfiI GAWTC 4 cut(s) 32, 423, 896, 1037
Tru1I TTAA 8 cut(s) 135, 180, 227, 302, 438, 693, 957, 1242
Tru9I TTAA 8 cut(s) 135, 180, 227, 302, 438, 693, 957, 1242
TseFI GTSAC 2 cut(s) 162, 409
TseI GCWGC 5 cut(s) 209, 1046, 1076, 1079, 1211
Tsp45I GTSAC 2 cut(s) 162, 409
TspDTI ATGAA 7 cut(s) 116, 207, 415, 460, 528, 583, 699
TspGWI ACGGA 1 cut(s) 831
VneI GTGCAC 1 cut(s) 1417
XapI RAATTY 3 cut(s) 248, 1348, 1378
XspI CTAG 8 cut(s) 98, 146, 269, 374, 1136, 1223, 1232, 1257
ZrmI AGTACT 1 cut(s) 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.