Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000374

Physical Location & Seq

Genomic Coordinates Reverse (-)

46143357 .. 46146300

Gene Structure 2944 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G029700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGACTTCTGCAGATTTTGTTGATACGGAGAACAGCAGCTGCGGCGGAGAGCCTTTCGGTCACGTGGTGCGGTGGCTGAAGGCGGTGCTGGAGAGATCATGGGGTAAGGTGCTGGAGGCGGCGAGGGAGGCGAAGAAGCTCGGGGAGGATGATCCGAGAAGGATTGTGCATTCGTTCAAAGTAGGGTTGGCTCTGACGTTGGTGTCTCTTTTTTATTACTATCGACCGCTTTATGATGGCTTAGGTGACGATGCAATGTGGGCTGTCTTGACCGTGGTCGTTGTCTTTGAGTTCTCGGTTGGAGCAACCCTAGGGAAGGGTATAAATAGGATGTTGGCAACGTTACTAGCTGGTGCTCTAGCTGTTGGAGTTCATCAGATATCAACTCTTTGGGGAGGAGAAGTCGGGGAGCCCATATTGATTGCATTTTTCGTCTTCGTTGTAGGTGTCTGCAGTGTGACCTTCATGCGATTCTTCCCCGCATTGAAGGCAAGGTATGACTACGGGCTGTTGATATTCACACTGACCTTCTGCTTGGTTTCGGTATCTGGCTACCGCGAAACACAGGTACTAGATATGGCACACAAGAGGCTATCAACGATTGCGATAGGAAGCTGTACTTCTATTATGGTTTGTATTTTCATCTGCCCTGTGTGGATTGGAGTTGATCTCCACAATTTGGTTGCTGGTAACATGGAAAATATTGGGGTCTTTATGGAAGGATTTGGATTTGAATACTTTGACATAAAAGGGAATGGGTTGTCATTAAGTAATCAGCAATATAAAAGTGTTCTTTCATCAAAAAGCCTTGAAGAAACCATGGTTAACTTGGCAAGATGGGAACCAGGTCATGGCGGGTTCAAGTTCGGCCACCCATGGGAGAAGTATTTGAATGTTGGAAGCCAAACTCGGCAATGTGCTTATAAAATTGAAGCTCTGAACACTTACCTGAACACTGATATCCAAGTGCCCGCTGAAATTCGAAGCAAAATTCTTCAAGAACCATGCATAAATATTTGCACTGAATCCGGAAAAGCATTGAAGGAATTAGCAGCAGCCCTCAAGAAAATGACTCGGTCATCATCAGCTGATTCCCACATTGCATGCTCAAAAGCAGCAGTTGAGAGCCTCAAGTTATTGTCACTCAAAAGAGGCATATGGAAAGATGCTAATCTGCTGGAAACAATACCATCTGCTGCGGTGGCGTCACTTCTTATTGAAGTCGTAGCTTGTGTTGAGAAGATTGCTGAAGCAGTTCACGAACTAGCATCCGTCGCACATTTCAAGACTGAACAGCCACAATTACTTCAGGAGCCAGCGCTTTCTGAAGAATATCATGTTGCTATTACAATTGACCGTAATTCAACTGAGGGGCTACCCAAAAATGGAAGTTCAGATGGCATCACTACATTAAAATATGGAACTTTAAATATTAGGTGTATTAGTTATTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008509 GO:0008514 GO:0009705 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071423 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ALMT

Protein Analysis

484

Amino Acids

53.08

Weight (kDa)

6.29

Isoelectric Point (pI)

38.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALMT	PF11744	46 - 378	3.4e-134	Aluminium activated malate transporter
FUSC_2	PF13515	70 - 211	1.3e-09	Fusaric acid resistance protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca	FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica	MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica	Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis	pycom03g10930 pycom11g14730
rosa_chinensis	RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata	RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora	Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii	Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa	Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha	Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana	Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	924
AasI	GACNNNNNNGTC	1 cut(s)	202
AccB7I	CCANNNNNTGG	2 cut(s)	679, 851
AccII	CGCG	1 cut(s)	558
AccIII	TCCGGA	1 cut(s)	1028
AclI	AACGTT	1 cut(s)	341
AclWI	GGATC	1 cut(s)	146
AcoI	YGGCCR	1 cut(s)	868
AcsI	RAATTY	2 cut(s)	978, 990
AcuI	CTGAAG	4 cut(s)	98, 1269, 1292, 1347
AcvI	CACGTG	1 cut(s)	64
AcyI	GRCGYC	1 cut(s)	1205
AdeI	CACNNNGTG	1 cut(s)	67
AfaI	GTAC	2 cut(s)	570, 619
AfeI	AGCGCT	1 cut(s)	1320
AfiI	CCNNNNNNNGG	5 cut(s)	316, 679, 851, 877, 1385
AjnI	CCWGG	1 cut(s)	844
AluBI	AGCT	8 cut(s)	39, 139, 350, 362, 615, 935, 1088, 1229
AluI	AGCT	8 cut(s)	39, 139, 350, 362, 615, 935, 1088, 1229
Alw21I	GWGCWC	1 cut(s)	358
Alw26I	GTCTC	1 cut(s)	210
AlwI	GGATC	1 cut(s)	146
AlwNI	CAGNNNCTG	1 cut(s)	39
Ama87I	CYCGRG	1 cut(s)	140
Aor13HI	TCCGGA	1 cut(s)	1028
Aor51HI	AGCGCT	1 cut(s)	1320
AoxI	GGCC	1 cut(s)	868
ApeKI	GCWGC	6 cut(s)	36, 39, 1052, 1055, 1115, 1196
ApoI	RAATTY	2 cut(s)	978, 990
Asp700I	GAANNNNTTC	1 cut(s)	1254
AspA2I	CCTAGG	1 cut(s)	310
AspLEI	GCGC	1 cut(s)	1321
AsuHPI	GGTGA	1 cut(s)	257
AsuII	TTCGAA	1 cut(s)	982
AvaI	CYCGRG	1 cut(s)	140
AvrII	CCTAGG	1 cut(s)	310
BaeGI	GKGCMC	1 cut(s)	972
BanII	GRGCYC	1 cut(s)	414
BbrPI	CACGTG	1 cut(s)	64
BbsI	GAAGAC	1 cut(s)	427
Bbv12I	GWGCWC	1 cut(s)	358
BbvI	GCAGC	6 cut(s)	26, 48, 1064, 1067, 1127, 1183
BccI	CCATC	4 cut(s)	230, 831, 1198, 1391
BciT130I	CCWGG	1 cut(s)	846
BcoDI	GTCTC	1 cut(s)	210
BfaI	CTAG	5 cut(s)	311, 347, 359, 572, 1265
BfmI	CTRYAG	2 cut(s)	9, 451
BfoI	RGCGCY	1 cut(s)	1322
BisI	GCNGC	8 cut(s)	37, 40, 43, 120, 1053, 1056, 1116, 1197
BlnI	CCTAGG	1 cut(s)	310
BlsI	GCNGC	8 cut(s)	38, 41, 44, 121, 1054, 1057, 1117, 1198
Bme1390I	CCNGG	1 cut(s)	846
BmeT110I	CYCGRG	1 cut(s)	140
BmiI	GGNNCC	3 cut(s)	411, 843, 1314
BmrFI	CCNGG	1 cut(s)	846
BmsI	GCATC	4 cut(s)	241, 1156, 1277, 1410
BoxI	GACNNNNGTC	1 cut(s)	275
BpiI	GAAGAC	1 cut(s)	427
BplI	GAGNNNNNCTC	2 cut(s)	654, 686
BpmI	CTGGAG	2 cut(s)	110, 134
Bpu10I	CCTNAGC	1 cut(s)	241
Bpu14I	TTCGAA	1 cut(s)	982
BpuEI	CTTGAG	2 cut(s)	1046, 1115
BsaAI	YACGTR	1 cut(s)	64
BsaBI	GATNNNNATC	1 cut(s)	1170
BsaHI	GRCGYC	1 cut(s)	1205
BsaJI	CCNNGG	4 cut(s)	273, 310, 819, 875
BsaWI	WCCGGW	1 cut(s)	1028
BsaXI	ACNNNNNCTCC	2 cut(s)	387, 417
Bsc4I	CCNNNNNNNGG	5 cut(s)	316, 679, 851, 877, 1385
Bse3DI	GCAATG	3 cut(s)	261, 920, 1098
Bse8I	GATNNNNATC	1 cut(s)	1170
BseAI	TCCGGA	1 cut(s)	1028
BseBI	CCWGG	1 cut(s)	846
BseDI	CCNNGG	4 cut(s)	273, 310, 819, 875
BseGI	GGATG	3 cut(s)	154, 336, 1268
BseJI	GATNNNNATC	1 cut(s)	1170
BseLI	CCNNNNNNNGG	5 cut(s)	316, 679, 851, 877, 1385
BseMI	GCAATG	3 cut(s)	261, 920, 1098
BseMII	CTCAG	1 cut(s)	1359
BseRI	GAGGAG	1 cut(s)	411
BseSI	GKGCMC	1 cut(s)	972
BseXI	GCAGC	6 cut(s)	26, 48, 1064, 1067, 1127, 1183
Bsh1236I	CGCG	1 cut(s)	558
Bsh1285I	CGRYCG	1 cut(s)	227
BshFI	GGCC	1 cut(s)	870
BsiEI	CGRYCG	1 cut(s)	227
BsiHKAI	GWGCWC	1 cut(s)	358
BsiHKCI	CYCGRG	1 cut(s)	140
BsiSI	CCGG	1 cut(s)	1029
BslI	CCNNNNNNNGG	5 cut(s)	316, 679, 851, 877, 1385
BsmAI	GTCTC	1 cut(s)	210
BsmI	GAATGC	1 cut(s)	169
BsnI	GGCC	1 cut(s)	870
BsoBI	CYCGRG	1 cut(s)	140
Bsp119I	TTCGAA	1 cut(s)	982
Bsp1286I	GDGCHC	3 cut(s)	358, 414, 972
Bsp13I	TCCGGA	1 cut(s)	1028
Bsp143I	GATC	3 cut(s)	95, 151, 667
Bsp19I	CCATGG	2 cut(s)	819, 875
BspANI	GGCC	1 cut(s)	870
BspCNI	CTCAG	1 cut(s)	1360
BspEI	TCCGGA	1 cut(s)	1028
BspFNI	CGCG	1 cut(s)	558
BspLI	GGNNCC	3 cut(s)	411, 843, 1314
BspMAI	CTGCAG	2 cut(s)	13, 455
BspPI	GGATC	1 cut(s)	146
BspT104I	TTCGAA	1 cut(s)	982
BsrDI	GCAATG	3 cut(s)	261, 920, 1098
BssECI	CCNNGG	4 cut(s)	273, 310, 819, 875
BssMI	GATC	3 cut(s)	95, 151, 667
BssNI	GRCGYC	1 cut(s)	1205
BssT1I	CCWWGG	3 cut(s)	310, 819, 875
Bst2UI	CCWGG	1 cut(s)	846
Bst4CI	ACNGT	2 cut(s)	274, 1358
BstACI	GRCGYC	1 cut(s)	1205
BstBAI	YACGTR	1 cut(s)	64
BstBI	TTCGAA	1 cut(s)	982
BstC8I	GCNNGC	3 cut(s)	972, 1105, 1317
BstDEI	CTNAG	2 cut(s)	241, 1368
BstDSI	CCRYGG	3 cut(s)	273, 819, 875
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	3 cut(s)	154, 336, 1268
BstFNI	CGCG	1 cut(s)	558
BstH2I	RGCGCY	1 cut(s)	1322
BstHHI	GCGC	1 cut(s)	1321
BstKTI	GATC	3 cut(s)	98, 154, 670
BstMAI	GTCTC	1 cut(s)	210
BstMBI	GATC	3 cut(s)	95, 151, 667
BstMCI	CGRYCG	1 cut(s)	227
BstMWI	GCNNNNNNNGC	6 cut(s)	42, 128, 260, 488, 1202, 1274
BstNI	CCWGG	1 cut(s)	846
BstNSI	RCATGY	1 cut(s)	1107
BstPAI	GACNNNNGTC	1 cut(s)	275
BstSCI	CCNGG	1 cut(s)	844
BstSFI	CTRYAG	2 cut(s)	9, 451
BstSLI	GKGCMC	1 cut(s)	972
BstUI	CGCG	1 cut(s)	558
BstV1I	GCAGC	6 cut(s)	26, 48, 1064, 1067, 1127, 1183
BstV2I	GAAGAC	1 cut(s)	427
BsuRI	GGCC	1 cut(s)	870
BtgI	CCRYGG	3 cut(s)	273, 819, 875
BtsCI	GGATG	3 cut(s)	154, 336, 1268
BtsI	GCAGTG	1 cut(s)	460
BtsIMutI	CAGTG	4 cut(s)	460, 521, 954, 1020
Cac8I	GCNNGC	3 cut(s)	972, 1105, 1317
CaiI	CAGNNNCTG	1 cut(s)	39
CfoI	GCGC	1 cut(s)	1321
CseI	GACGC	1 cut(s)	1194
CsiI	ACCWGGT	1 cut(s)	844
Csp6I	GTAC	2 cut(s)	569, 618
CviAII	CATG	9 cut(s)	99, 466, 694, 820, 851, 876, 1005, 1104, 1337
CviQI	GTAC	2 cut(s)	569, 618
DdeI	CTNAG	2 cut(s)	241, 1368
DpnI	GATC	3 cut(s)	97, 153, 669
DpnII	GATC	3 cut(s)	95, 151, 667
DraI	TTTAAA	1 cut(s)	1428
DraIII	CACNNNGTG	1 cut(s)	67
DrdI	GACNNNNNNGTC	1 cut(s)	202
DseDI	GACNNNNNNGTC	1 cut(s)	202
EaeI	YGGCCR	1 cut(s)	868
EciI	GGCGGA	1 cut(s)	60
Eco130I	CCWWGG	3 cut(s)	310, 819, 875
Eco24I	GRGCYC	1 cut(s)	414
Eco32I	GATATC	2 cut(s)	381, 961
Eco47III	AGCGCT	1 cut(s)	1320
Eco57I	CTGAAG	4 cut(s)	98, 1269, 1292, 1347
Eco72I	CACGTG	1 cut(s)	64
Eco88I	CYCGRG	1 cut(s)	140
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoRII	CCWGG	1 cut(s)	844
EcoRV	GATATC	2 cut(s)	381, 961
EcoT14I	CCWWGG	3 cut(s)	310, 819, 875
EcoT22I	ATGCAT	1 cut(s)	1010
EcoT38I	GRGCYC	1 cut(s)	414
ErhI	CCWWGG	3 cut(s)	310, 819, 875
FaeI	CATG	9 cut(s)	102, 469, 697, 823, 854, 879, 1008, 1107, 1340
FalI	AAGNNNNNCTT	2 cut(s)	604, 636
FatI	CATG	9 cut(s)	98, 465, 693, 819, 850, 875, 1004, 1103, 1336
FauI	CCCGC	3 cut(s)	487, 848, 979
FauNDI	CATATG	1 cut(s)	1157
Fnu4HI	GCNGC	8 cut(s)	37, 40, 43, 120, 1053, 1056, 1116, 1197
FokI	GGATG	3 cut(s)	161, 343, 1255
FriOI	GRGCYC	1 cut(s)	414
Fsp4HI	GCNGC	8 cut(s)	37, 40, 43, 120, 1053, 1056, 1116, 1197
FspBI	CTAG	5 cut(s)	311, 347, 359, 572, 1265
GlaI	GCGC	1 cut(s)	1320
GluI	GCNGC	8 cut(s)	37, 40, 43, 120, 1053, 1056, 1116, 1197
GsuI	CTGGAG	2 cut(s)	110, 134
HaeII	RGCGCY	1 cut(s)	1322
HaeIII	GGCC	1 cut(s)	870
HapII	CCGG	1 cut(s)	1029
HgaI	GACGC	1 cut(s)	1194
HhaI	GCGC	1 cut(s)	1321
Hin1I	GRCGYC	1 cut(s)	1205
Hin1II	CATG	9 cut(s)	102, 469, 697, 823, 854, 879, 1008, 1107, 1340
Hin6I	GCGC	1 cut(s)	1319
HinP1I	GCGC	1 cut(s)	1319
HincII	GTYRAC	1 cut(s)	826
HindII	GTYRAC	1 cut(s)	826
HinfI	GANTC	4 cut(s)	471, 1025, 1072, 1091
HpaI	GTTAAC	1 cut(s)	826
HpaII	CCGG	1 cut(s)	1029
HphI	GGTGA	1 cut(s)	257
Hpy166II	GTNNAC	2 cut(s)	826, 1258
Hpy188I	TCNGA	6 cut(s)	156, 195, 378, 939, 1327, 1396
Hpy188III	TCNNGA	7 cut(s)	268, 998, 1029, 1063, 1259, 1285, 1310
Hpy8I	GTNNAC	2 cut(s)	826, 1258
Hpy99I	CGWCG	1 cut(s)	1277
HpyAV	CCTTC	8 cut(s)	73, 153, 310, 472, 481, 538, 713, 1036
HpyCH4III	ACNGT	2 cut(s)	274, 1358
HpyCH4IV	ACGT	3 cut(s)	63, 197, 341
HpyCH4V	TGCA	8 cut(s)	11, 169, 254, 425, 453, 1008, 1020, 1103
HpyF10VI	GCNNNNNNNGC	6 cut(s)	42, 128, 260, 488, 1202, 1274
HpyF3I	CTNAG	2 cut(s)	241, 1368
HpySE526I	ACGT	3 cut(s)	63, 197, 341
Hsp92I	GRCGYC	1 cut(s)	1205
Hsp92II	CATG	9 cut(s)	102, 469, 697, 823, 854, 879, 1008, 1107, 1340
HspAI	GCGC	1 cut(s)	1319
Kpn2I	TCCGGA	1 cut(s)	1028
KspAI	GTTAAC	1 cut(s)	826
Kzo9I	GATC	3 cut(s)	95, 151, 667
LmnI	GCTCC	3 cut(s)	302, 409, 1312
Lsp1109I	GCAGC	6 cut(s)	26, 48, 1064, 1067, 1127, 1183
LweI	GCATC	4 cut(s)	241, 1156, 1277, 1410
MabI	ACCWGGT	1 cut(s)	844
MaeI	CTAG	5 cut(s)	311, 347, 359, 572, 1265
MaeII	ACGT	3 cut(s)	63, 197, 341
MaeIII	GTNAC	7 cut(s)	59, 245, 342, 457, 689, 1140, 1206
MalI	GATC	3 cut(s)	97, 153, 669
MboI	GATC	3 cut(s)	95, 151, 667
MboII	GAAGA	7 cut(s)	145, 427, 466, 824, 986, 1252, 1340
MfeI	CAATTG	1 cut(s)	1350
MhlI	GDGCHC	3 cut(s)	358, 414, 972
MluCI	AATT	8 cut(s)	676, 927, 978, 990, 1046, 1301, 1350, 1360
MlyI	GAGTC	1 cut(s)	1066
MmeI	TCCRAC	3 cut(s)	280, 346, 877
Mph1103I	ATGCAT	1 cut(s)	1010
MroI	TCCGGA	1 cut(s)	1028
MroXI	GAANNNNTTC	1 cut(s)	1254
MseI	TTAA	5 cut(s)	767, 825, 1412, 1427, 1453
MspA1I	CMGCKG	3 cut(s)	39, 974, 1088
MspI	CCGG	1 cut(s)	1029
MspR9I	CCNGG	1 cut(s)	846
MunI	CAATTG	1 cut(s)	1350
Mva1269I	GAATGC	1 cut(s)	169
MvaI	CCWGG	1 cut(s)	846
MvnI	CGCG	1 cut(s)	558
MwoI	GCNNNNNNNGC	6 cut(s)	42, 128, 260, 488, 1202, 1274
NcoI	CCATGG	2 cut(s)	819, 875
NdeI	CATATG	1 cut(s)	1157
NdeII	GATC	3 cut(s)	95, 151, 667
NlaIII	CATG	9 cut(s)	102, 469, 697, 823, 854, 879, 1008, 1107, 1340
NlaIV	GGNNCC	3 cut(s)	411, 843, 1314
NmeAIII	GCCGAG	1 cut(s)	889
NmuCI	GTSAC	5 cut(s)	59, 245, 457, 1140, 1206
NsiI	ATGCAT	1 cut(s)	1010
NspI	RCATGY	1 cut(s)	1107
NspV	TTCGAA	1 cut(s)	982
PaeI	GCATGC	1 cut(s)	1107
PctI	GAATGC	1 cut(s)	169
PdmI	GAANNNNTTC	1 cut(s)	1254
PfeI	GAWTC	3 cut(s)	471, 1025, 1091
PflFI	GACNNNGTC	1 cut(s)	1075
PflMI	CCANNNNNTGG	2 cut(s)	679, 851
PkrI	GCNGC	8 cut(s)	38, 41, 44, 121, 1054, 1057, 1117, 1198
PleI	GAGTC	1 cut(s)	1066
PmaCI	CACGTG	1 cut(s)	64
PmlI	CACGTG	1 cut(s)	64
PpsI	GAGTC	1 cut(s)	1066
Ppu21I	YACGTR	1 cut(s)	64
PshAI	GACNNNNGTC	1 cut(s)	275
PsiI	TTATAA	1 cut(s)	924
Psp1406I	AACGTT	1 cut(s)	341
Psp6I	CCWGG	1 cut(s)	844
PspCI	CACGTG	1 cut(s)	64
PspGI	CCWGG	1 cut(s)	844
PspN4I	GGNNCC	3 cut(s)	411, 843, 1314
PstI	CTGCAG	2 cut(s)	13, 455
PstNI	CAGNNNCTG	1 cut(s)	39
PsyI	GACNNNGTC	1 cut(s)	1075
PvuII	CAGCTG	2 cut(s)	39, 1088
RsaI	GTAC	2 cut(s)	570, 619
RsaNI	GTAC	2 cut(s)	569, 618
SaqAI	TTAA	5 cut(s)	767, 825, 1412, 1427, 1453
SatI	GCNGC	8 cut(s)	37, 40, 43, 120, 1053, 1056, 1116, 1197
Sau3AI	GATC	3 cut(s)	95, 151, 667
SchI	GAGTC	1 cut(s)	1066
ScrFI	CCNGG	1 cut(s)	846
SduI	GDGCHC	3 cut(s)	358, 414, 972
SexAI	ACCWGGT	1 cut(s)	844
SfaNI	GCATC	4 cut(s)	241, 1156, 1277, 1410
SfcI	CTRYAG	2 cut(s)	9, 451
SfuI	TTCGAA	1 cut(s)	982
SmlI	CTYRAG	2 cut(s)	1061, 1130
SmoI	CTYRAG	2 cut(s)	1061, 1130
SphI	GCATGC	1 cut(s)	1107
Sse9I	AATT	8 cut(s)	676, 927, 978, 990, 1046, 1301, 1350, 1360
SspI	AATATT	3 cut(s)	703, 1015, 1432
SspMI	CTAG	5 cut(s)	311, 347, 359, 572, 1265
StyD4I	CCNGG	1 cut(s)	844
StyI	CCWWGG	3 cut(s)	310, 819, 875
TaaI	ACNGT	2 cut(s)	274, 1358
TaiI	ACGT	3 cut(s)	66, 200, 344
TaqI	TCGA	2 cut(s)	223, 982
TaqII	GACCGA	2 cut(s)	47, 1065
TasI	AATT	8 cut(s)	676, 927, 978, 990, 1046, 1301, 1350, 1360
TatI	WGTACW	1 cut(s)	617
TauI	GCSGC	2 cut(s)	45, 122
TfiI	GAWTC	3 cut(s)	471, 1025, 1091
Tru1I	TTAA	5 cut(s)	767, 825, 1412, 1427, 1453
Tru9I	TTAA	5 cut(s)	767, 825, 1412, 1427, 1453
TscAI	CASTG	4 cut(s)	460, 528, 961, 1027
TseFI	GTSAC	5 cut(s)	59, 245, 457, 1140, 1206
TseI	GCWGC	6 cut(s)	36, 39, 1052, 1055, 1115, 1196
Tsp45I	GTSAC	5 cut(s)	59, 245, 457, 1140, 1206
TspDTI	ATGAA	4 cut(s)	362, 454, 631, 786
TspGWI	ACGGA	2 cut(s)	41, 1261
TspRI	CASTG	4 cut(s)	460, 528, 961, 1027
Tth111I	GACNNNGTC	1 cut(s)	1075
Van91I	CCANNNNNTGG	2 cut(s)	679, 851
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	2 cut(s)	978, 990
XceI	RCATGY	1 cut(s)	1107
XcmI	CCANNNNNNNNNTGG	1 cut(s)	826
XmaJI	CCTAGG	1 cut(s)	310
XmnI	GAANNNNTTC	1 cut(s)	1254
XspI	CTAG	5 cut(s)	311, 347, 359, 572, 1265
Zsp2I	ATGCAT	1 cut(s)	1010

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.