RLG00000034515

aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
44149769 .. 44152256
2488 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034515

Sequence Viewer

Length: 1332 bp
ATGGCATCTTCAAATAATGACCATGATCAGGTTAAAGCTGCAGGACTCTTCGAGAGGTTATGGGGGAAGATAGTTAAGTTCGGTTTGATGTTAAAAAAACTCGGGCAAGATGATCCAAGAAGAATTGTTCATTCTCTTAAAGTGGCACTAGCTCTTACATTGGTCTCCATGTTATTCTACTTTGAACCACTGTATGAAGGTTTAGGTCTTGCTGCTATGTGGGCTATTCTGACTGTTGTGGTCGTTTTTGAATTTTCTGTTGGAGCGACGATAGGACGAGGTTTGAATAGAATGATGTCAACTGTAGTAGCTGCTGCTCTTGGCATTGGAGCTCATCGATTAGCAACTCTGACAGGAAATCAAGGAGAGCCTATACTTATTGCTCTCTTTGTCTTCGTAGAAGCTGGAATAGTGACATTCTTCAGATTCATTCCCCAAATGAAGGCAAGATACGATTATGGGCTGCTGATATTCAACGTGACGTTCTGCCTGGTATCGGTGTCTGGATATCGAGACAAAGAGGTCATACAAATGGGATTCGAAAGGGTATGTACCATCACCATTGGAGGCTGTATCGCTGTTGCTGTTTGTGTTTTCATTCGTCCAGTATGGATAGGGGTGGAGCTTCACAATAGGATTTCTACCAACATGGAAAAGCTGGCCAATTTCTTAGAAGAATTTGGAGATGAATACTTTAAAGTATCTGAAAATGAGCAGACCAGAGAGAAGTCATCGTTTCTTGAGGGATATAAAAGTGTTCTAACTTCAAAAGGCAGTGAAAACACTATGGCTAATTTGGCAAGATGGGAACCGGGCCATGGGAATTTCAGATTTCGTCATCCATGGGAACAATACTTGAAAGTTGGAACCCTTACTCGCCAATGTGCGTTCAAAATTGAAGCTCTCAACAACTACCTTACCTCTGAAACCCAAACACCTCAGGAAGTTAAAACCATAATACAAGGGCCAAGCGTGGTTATAAGCTCAGAGTGTGGGAAAGCATTGAAGGAGTTAGCAACTTCAGTGAAGAAAATGACCAAATCATCCTCAAATGAGCCTCATATTGCAAAGTCGAAAGATGCTGCTGAAGAACTCAAAGCTGTTATAAGATCAAGCTTGTGTAAACACCCAGCTGATTCTCTACATATAATACAAGAAGGTGCAGTGGCTTCACTACTCCTTGAAATTATCACATGTATAGAGAAAATTGCCGACGCTGCTCATAAACTAGCATCCCAAGCACATTTTAAGGATGTAAAGCCTACAGTGAAACCGGACCAGGAAAACTCCGTGAATGATGGGCCACACATTGTTATTACGATTGAGGGTTAA

Protein Analysis

444

Amino Acids

48.97

Weight (kDa)

8.03

Isoelectric Point (pI)

28.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 33 - 371 4.2e-138 Aluminium activated malate transporter
FUSC_2 PF13515 72 - 196 1.8e-09 Fusaric acid resistance protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000374)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis pycom03g10930 pycom11g14730
rosa_chinensis RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 980, 1106
AasI GACNNNNNNGTC 1 cut(s) 521
AclWI GGATC 1 cut(s) 107
AcoI YGGCCR 1 cut(s) 660
AcsI RAATTY 3 cut(s) 251, 677, 823
AcuI CTGAAG 3 cut(s) 406, 1005, 1107
AfaI GTAC 1 cut(s) 553
AfiI CCNNNNNNNGG 4 cut(s) 28, 442, 496, 818
AflIII ACRYGT 1 cut(s) 1193
AjnI CCWGG 2 cut(s) 489, 1278
AjuI GAANNNNNNNTTGG 2 cut(s) 243, 275
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 2 cut(s) 169, 507
AlwI GGATC 1 cut(s) 107
Ama87I CYCGRG 1 cut(s) 101
AoxI GGCC 4 cut(s) 660, 814, 965, 1301
ApeKI GCWGC 7 cut(s) 38, 212, 311, 314, 463, 1082, 1217
ApoI RAATTY 3 cut(s) 251, 677, 823
AspS9I GGNCC 4 cut(s) 814, 965, 1276, 1301
AsuC2I CCSGG 1 cut(s) 813
AsuHPI GGTGA 1 cut(s) 550
AsuII TTCGAA 1 cut(s) 540
AvaI CYCGRG 1 cut(s) 101
AvaII GGWCC 1 cut(s) 1276
AxyI CCTNAGG 1 cut(s) 939
BalI TGGCCA 1 cut(s) 662
BanII GRGCYC 1 cut(s) 334
BarI GAAGNNNNNNTAC 2 cut(s) 434, 466
BbsI GAAGAC 1 cut(s) 385
Bbv12I GWGCWC 1 cut(s) 334
BbvI GCAGC 7 cut(s) 25, 199, 298, 301, 450, 1069, 1204
BccI CCATC 3 cut(s) 563, 798, 1292
BciT130I CCWGG 2 cut(s) 491, 1280
BclI TGATCA 1 cut(s) 25
BcnI CCSGG 1 cut(s) 813
BcoDI GTCTC 2 cut(s) 169, 507
BfaI CTAG 2 cut(s) 149, 1229
BfmI CTRYAG 3 cut(s) 39, 303, 1263
BisI GCNGC 7 cut(s) 39, 213, 312, 315, 464, 1083, 1218
BlsI GCNGC 7 cut(s) 40, 214, 313, 316, 465, 1084, 1219
Bme1390I CCNGG 3 cut(s) 491, 813, 1280
Bme18I GGWCC 1 cut(s) 1276
BmeT110I CYCGRG 1 cut(s) 101
BmgT120I GGNCC 4 cut(s) 814, 965, 1276, 1301
BmiI GGNNCC 2 cut(s) 810, 868
BmrFI CCNGG 3 cut(s) 491, 813, 1280
BmsI GCATC 3 cut(s) 14, 1069, 1241
BpiI GAAGAC 1 cut(s) 385
Bpu14I TTCGAA 1 cut(s) 540
BpuEI CTTGAG 1 cut(s) 761
BpuMI CCSGG 1 cut(s) 813
Bsa29I ATCGAT 1 cut(s) 337
BsaI GGTCTC 1 cut(s) 169
BsaJI CCNNGG 2 cut(s) 817, 842
BsaWI WCCGGW 1 cut(s) 1273
Bsc4I CCNNNNNNNGG 4 cut(s) 28, 442, 496, 818
Bse1I ACTGG 1 cut(s) 605
Bse21I CCTNAGG 1 cut(s) 939
BseBI CCWGG 2 cut(s) 491, 1280
BseCI ATCGAT 1 cut(s) 337
BseDI CCNNGG 2 cut(s) 817, 842
BseGI GGATG 4 cut(s) 838, 1043, 1232, 1258
BseLI CCNNNNNNNGG 4 cut(s) 28, 442, 496, 818
BseMII CTCAG 2 cut(s) 953, 999
BseNI ACTGG 1 cut(s) 605
BseXI GCAGC 7 cut(s) 25, 199, 298, 301, 450, 1069, 1204
BseYI CCCAGC 1 cut(s) 1129
BsgI GTGCAG 1 cut(s) 1182
BshFI GGCC 4 cut(s) 662, 816, 967, 1303
BshVI ATCGAT 1 cut(s) 337
BsiHKAI GWGCWC 1 cut(s) 334
BsiHKCI CYCGRG 1 cut(s) 101
BsiSI CCGG 2 cut(s) 812, 1274
BslI CCNNNNNNNGG 4 cut(s) 28, 442, 496, 818
BsmAI GTCTC 2 cut(s) 169, 507
BsnI GGCC 4 cut(s) 662, 816, 967, 1303
Bso31I GGTCTC 1 cut(s) 169
BsoBI CYCGRG 1 cut(s) 101
Bsp119I TTCGAA 1 cut(s) 540
Bsp1286I GDGCHC 1 cut(s) 334
Bsp143I GATC 3 cut(s) 25, 112, 1109
Bsp19I CCATGG 2 cut(s) 817, 842
BspANI GGCC 4 cut(s) 662, 816, 967, 1303
BspCNI CTCAG 2 cut(s) 952, 998
BspDI ATCGAT 1 cut(s) 337
BspLI GGNNCC 2 cut(s) 810, 868
BspMAI CTGCAG 1 cut(s) 43
BspPI GGATC 1 cut(s) 107
BspT104I TTCGAA 1 cut(s) 540
BspTNI GGTCTC 1 cut(s) 169
BsrI ACTGG 1 cut(s) 605
BssECI CCNNGG 2 cut(s) 817, 842
BssMI GATC 3 cut(s) 25, 112, 1109
BssT1I CCWWGG 2 cut(s) 817, 842
Bst2UI CCWGG 2 cut(s) 491, 1280
Bst4CI ACNGT 4 cut(s) 192, 235, 304, 1267
Bst6I CTCTTC 1 cut(s) 53
BstBI TTCGAA 1 cut(s) 540
BstC8I GCNNGC 1 cut(s) 660
BstDEI CTNAG 3 cut(s) 670, 939, 985
BstDSI CCRYGG 2 cut(s) 817, 842
BstF5I GGATG 4 cut(s) 838, 1043, 1232, 1258
BstKTI GATC 3 cut(s) 28, 115, 1112
BstMAI GTCTC 2 cut(s) 169, 507
BstMBI GATC 3 cut(s) 25, 112, 1109
BstMWI GCNNNNNNNGC 4 cut(s) 221, 797, 1217, 1238
BstNI CCWGG 2 cut(s) 491, 1280
BstNSI RCATGY 1 cut(s) 1197
BstSCI CCNGG 3 cut(s) 489, 811, 1278
BstSFI CTRYAG 3 cut(s) 39, 303, 1263
BstV1I GCAGC 7 cut(s) 25, 199, 298, 301, 450, 1069, 1204
BstV2I GAAGAC 1 cut(s) 385
Bsu15I ATCGAT 1 cut(s) 337
Bsu36I CCTNAGG 1 cut(s) 939
BsuRI GGCC 4 cut(s) 662, 816, 967, 1303
BsuTUI ATCGAT 1 cut(s) 337
BtgI CCRYGG 2 cut(s) 817, 842
BtsCI GGATG 4 cut(s) 838, 1043, 1232, 1258
BtsI GCAGTG 2 cut(s) 781, 1170
BtsIMutI CAGTG 5 cut(s) 188, 781, 1029, 1170, 1272
Cac8I GCNNGC 1 cut(s) 660
Cfr13I GGNCC 4 cut(s) 814, 965, 1276, 1301
ClaI ATCGAT 1 cut(s) 337
CseI GACGC 1 cut(s) 1223
Csp6I GTAC 1 cut(s) 552
CviAII CATG 6 cut(s) 23, 169, 649, 818, 843, 1194
CviQI GTAC 1 cut(s) 552
DdeI CTNAG 3 cut(s) 670, 939, 985
DpnI GATC 3 cut(s) 27, 114, 1111
DpnII GATC 3 cut(s) 25, 112, 1109
DraI TTTAAA 1 cut(s) 697
DrdI GACNNNNNNGTC 1 cut(s) 521
DseDI GACNNNNNNGTC 1 cut(s) 521
EaeI YGGCCR 1 cut(s) 660
Eam1104I CTCTTC 1 cut(s) 53
EarI CTCTTC 1 cut(s) 53
Ecl136II GAGCTC 1 cut(s) 332
Eco130I CCWWGG 2 cut(s) 817, 842
Eco24I GRGCYC 1 cut(s) 334
Eco31I GGTCTC 1 cut(s) 169
Eco32I GATATC 1 cut(s) 509
Eco47I GGWCC 1 cut(s) 1276
Eco53kI GAGCTC 1 cut(s) 332
Eco57I CTGAAG 3 cut(s) 406, 1005, 1107
Eco81I CCTNAGG 1 cut(s) 939
Eco88I CYCGRG 1 cut(s) 101
EcoICRI GAGCTC 1 cut(s) 332
EcoRII CCWGG 2 cut(s) 489, 1278
EcoRV GATATC 1 cut(s) 509
EcoT14I CCWWGG 2 cut(s) 817, 842
EcoT38I GRGCYC 1 cut(s) 334
ErhI CCWWGG 2 cut(s) 817, 842
FaeI CATG 6 cut(s) 26, 172, 652, 821, 846, 1197
FatI CATG 6 cut(s) 22, 168, 648, 817, 842, 1193
FbaI TGATCA 1 cut(s) 25
Fnu4HI GCNGC 7 cut(s) 39, 213, 312, 315, 464, 1083, 1218
FokI GGATG 4 cut(s) 825, 1030, 1219, 1265
FriOI GRGCYC 1 cut(s) 334
Fsp4HI GCNGC 7 cut(s) 39, 213, 312, 315, 464, 1083, 1218
FspBI CTAG 2 cut(s) 149, 1229
GluI GCNGC 7 cut(s) 39, 213, 312, 315, 464, 1083, 1218
GsaI CCCAGC 1 cut(s) 1133
HaeIII GGCC 4 cut(s) 662, 816, 967, 1303
HapII CCGG 2 cut(s) 812, 1274
HgaI GACGC 1 cut(s) 1223
Hin1II CATG 6 cut(s) 26, 172, 652, 821, 846, 1197
HincII GTYRAC 1 cut(s) 300
HindII GTYRAC 1 cut(s) 300
HindIII AAGCTT 1 cut(s) 1114
HinfI GANTC 4 cut(s) 45, 426, 537, 1136
HpaII CCGG 2 cut(s) 812, 1274
HphI GGTGA 1 cut(s) 550
Hpy166II GTNNAC 2 cut(s) 300, 1124
Hpy188I TCNGA 7 cut(s) 231, 351, 425, 706, 830, 925, 988
Hpy188III TCNNGA 5 cut(s) 52, 504, 512, 740, 941
Hpy8I GTNNAC 2 cut(s) 300, 1124
Hpy99I CGWCG 2 cut(s) 271, 1217
HpyAV CCTTC 4 cut(s) 191, 436, 1000, 1151
HpyCH4III ACNGT 4 cut(s) 192, 235, 304, 1267
HpyCH4IV ACGT 2 cut(s) 477, 482
HpyCH4V TGCA 3 cut(s) 41, 1067, 1163
HpyF10VI GCNNNNNNNGC 4 cut(s) 221, 797, 1217, 1238
HpyF3I CTNAG 3 cut(s) 670, 939, 985
HpySE526I ACGT 2 cut(s) 477, 482
Hsp92II CATG 6 cut(s) 26, 172, 652, 821, 846, 1197
Ksp22I TGATCA 1 cut(s) 25
Kzo9I GATC 3 cut(s) 25, 112, 1109
LmnI GCTCC 3 cut(s) 263, 329, 622
Lsp1109I GCAGC 7 cut(s) 25, 199, 298, 301, 450, 1069, 1204
LweI GCATC 3 cut(s) 14, 1069, 1241
MaeI CTAG 2 cut(s) 149, 1229
MaeII ACGT 2 cut(s) 477, 482
MaeIII GTNAC 2 cut(s) 412, 478
MalI GATC 3 cut(s) 27, 114, 1111
MboI GATC 3 cut(s) 25, 112, 1109
MboII GAAGA 8 cut(s) 40, 79, 132, 385, 412, 686, 1039, 1100
MhlI GDGCHC 1 cut(s) 334
MlsI TGGCCA 1 cut(s) 662
MluCI AATT 9 cut(s) 123, 251, 664, 677, 793, 823, 894, 1185, 1206
MluNI TGGCCA 1 cut(s) 662
MlyI GAGTC 1 cut(s) 39
MmeI TCCRAC 2 cut(s) 241, 844
Mox20I TGGCCA 1 cut(s) 662
MscI TGGCCA 1 cut(s) 662
MseI TTAA 8 cut(s) 33, 75, 92, 138, 696, 948, 1248, 1330
MslI CAYNNNNRTG 1 cut(s) 530
Msp20I TGGCCA 1 cut(s) 662
MspA1I CMGCKG 1 cut(s) 1133
MspI CCGG 2 cut(s) 812, 1274
MspR9I CCNGG 3 cut(s) 491, 813, 1280
MvaI CCWGG 2 cut(s) 491, 1280
MwoI GCNNNNNNNGC 4 cut(s) 221, 797, 1217, 1238
NciI CCSGG 1 cut(s) 813
NcoI CCATGG 2 cut(s) 817, 842
NdeII GATC 3 cut(s) 25, 112, 1109
NlaIII CATG 6 cut(s) 26, 172, 652, 821, 846, 1197
NlaIV GGNNCC 2 cut(s) 810, 868
NmuCI GTSAC 2 cut(s) 412, 478
NspI RCATGY 1 cut(s) 1197
NspV TTCGAA 1 cut(s) 540
PciI ACATGT 1 cut(s) 1193
PfeI GAWTC 3 cut(s) 426, 537, 1136
PkrI GCNGC 7 cut(s) 40, 214, 313, 316, 465, 1084, 1219
PleI GAGTC 1 cut(s) 39
PpsI GAGTC 1 cut(s) 39
PscI ACATGT 1 cut(s) 1193
PsiI TTATAA 2 cut(s) 980, 1106
Psp124BI GAGCTC 1 cut(s) 334
Psp6I CCWGG 2 cut(s) 489, 1278
PspFI CCCAGC 1 cut(s) 1129
PspGI CCWGG 2 cut(s) 489, 1278
PspN4I GGNNCC 2 cut(s) 810, 868
PspPI GGNCC 4 cut(s) 814, 965, 1276, 1301
PstI CTGCAG 1 cut(s) 43
PvuII CAGCTG 1 cut(s) 1133
RsaI GTAC 1 cut(s) 553
RsaNI GTAC 1 cut(s) 552
RseI CAYNNNNRTG 1 cut(s) 530
SacI GAGCTC 1 cut(s) 334
SaqAI TTAA 8 cut(s) 33, 75, 92, 138, 696, 948, 1248, 1330
SatI GCNGC 7 cut(s) 39, 213, 312, 315, 464, 1083, 1218
Sau3AI GATC 3 cut(s) 25, 112, 1109
Sau96I GGNCC 4 cut(s) 814, 965, 1276, 1301
SchI GAGTC 1 cut(s) 39
ScrFI CCNGG 3 cut(s) 491, 813, 1280
SduI GDGCHC 1 cut(s) 334
SfaNI GCATC 3 cut(s) 14, 1069, 1241
SfcI CTRYAG 3 cut(s) 39, 303, 1263
SfuI TTCGAA 1 cut(s) 540
SinI GGWCC 1 cut(s) 1276
SmiMI CAYNNNNRTG 1 cut(s) 530
SmlI CTYRAG 1 cut(s) 740
SmoI CTYRAG 1 cut(s) 740
Sse9I AATT 9 cut(s) 123, 251, 664, 677, 793, 823, 894, 1185, 1206
SspMI CTAG 2 cut(s) 149, 1229
SstI GAGCTC 1 cut(s) 334
StyD4I CCNGG 3 cut(s) 489, 811, 1278
StyI CCWWGG 2 cut(s) 817, 842
TaaI ACNGT 4 cut(s) 192, 235, 304, 1267
TaiI ACGT 2 cut(s) 480, 485
TaqI TCGA 5 cut(s) 51, 337, 511, 540, 1073
TasI AATT 9 cut(s) 123, 251, 664, 677, 793, 823, 894, 1185, 1206
TfiI GAWTC 3 cut(s) 426, 537, 1136
Tru1I TTAA 8 cut(s) 33, 75, 92, 138, 696, 948, 1248, 1330
Tru9I TTAA 8 cut(s) 33, 75, 92, 138, 696, 948, 1248, 1330
TscAI CASTG 5 cut(s) 195, 781, 1029, 1170, 1272
TseFI GTSAC 2 cut(s) 412, 478
TseI GCWGC 7 cut(s) 38, 212, 311, 314, 463, 1082, 1217
Tsp45I GTSAC 2 cut(s) 412, 478
TspDTI ATGAA 6 cut(s) 119, 210, 418, 455, 586, 702
TspGWI ACGGA 1 cut(s) 1279
TspRI CASTG 5 cut(s) 195, 781, 1029, 1170, 1272
VpaK11BI GGWCC 1 cut(s) 1276
XapI RAATTY 3 cut(s) 251, 677, 823
XceI RCATGY 1 cut(s) 1197
XspI CTAG 2 cut(s) 149, 1229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.