MD00G1049700.v1.1

aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
9330704 .. 9332927
2224 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1049700.v1.1.491

Sequence Viewer

Length: 1239 bp
ATGGTATCTTCAAACCATGAAAACGCTGCAGGGTCCCTAGCCTTTCCCAAAAGACTATGGGGTAAAATAGTTGGATTTGCCTTGAGGCTAAAGAATTTAGGCAAAGATGATCCAAGAAGGATGATTCATTGTTTTAAAGTGGGACTAGCTCTAACTTTTGTGTCACTCTTCTACTACTTTAAACCACTCTATGACGGCTTTGGCCTTGATACAATGTGGTCTATTTTAACCGTTGTGGTTGTGTTTGAATTTTCTGTTGGAGCAACACTGGGAAAAGGTTTCAATAGAATGTTGGCAACTTTAACAGCTGGTGCTCTTGGCATTGGGGCTCATCGCTTAGCAACTCTTTCTGGAGAGACTGGGGAGCCTATACTAATTGCTCTCTTTGTTTTTATAATAGCTGGAATAGTAACATTCCTGAGATTCATTCCCCAAATTAAGGCGAGGTATGATTATGGGATGATGGTATTTATATTGACATTCTGCTTGATTTTGGTGTCTGGTGATCGGGATGAAGAGGTTGTACGAATGGGATTCGAGAGGCTATCGACAATCGTCATTGGAAGCTGTGCTGCTGTATTTGCCAATTTGGCAAAATGGGAACCCTGCCACGGCAAGTTCAGATTTCGTCATCCATGGAATGAGTACTTGAAAGTTGGGAGCGTGACTCGCCAGTGCGCCTTCAAAATTGAATCTCTCAACCACTACCTTACCTCTGAGATCCAATCACCACCAGAAGTTCGAAGTATAATTCAAGGGGAATGCACAGTTATTAGCTCAGAATGTGGGAAAGCATTGAAGGAACTAGCATCTGAAGTCCGAAAAATGACTAAATCATCAGCAGCAGAACCTCACATTACGAACTCAAAAGCTGCTGCTGAAAACCTCAAAGCGGTAATCAGATCCAGCTTGTCTAAACACTGCAATTACCTAGAGATAATGCAAGCAGGAGCAGTAGCTTCTCTACTATTTGAAGTTGTCAAATGTACAGAAGAAATTGCTGGTGCTGCTCATAAACTAGCATCCCTGGCACACTTTAAGAATGCTAAGCCTAGAGTGACCCCAGAGACGCAAGAATTACCTTCGCAGGGAGCGGTAAATCCAGTATCAGGCATCGATGGGGCACATCATGTTATAACGATAGATCCATCTCAAAGTTTACGTGGAAGTGAGAACTCGTCCCCACCAGTACTGGCTCCAAGAATGGAAGTGCAGACTTTGGAAATGAGTAGTTTTTAG

Protein Analysis

413

Amino Acids

45.12

Weight (kDa)

8.87

Isoelectric Point (pI)

40.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 32 - 196 1.1e-74 Aluminium activated malate transporter
FUSC_2 PF13515 71 - 194 6.6e-08 Fusaric acid resistance protein-like
ALMT PF11744 195 - 303 1.7e-34 Aluminium activated malate transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000374)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis pycom03g10930 pycom11g14730
rosa_chinensis RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 395, 1136
AccBSI CCGCTC 1 cut(s) 1094
AciI CCGC 2 cut(s) 893, 1094
AclWI GGATC 4 cut(s) 104, 715, 897, 1139
AcsI RAATTY 2 cut(s) 94, 248
AcuI CTGAAG 1 cut(s) 834
AfaI GTAC 4 cut(s) 525, 647, 988, 1191
AfiI CCNNNNNNNGG 5 cut(s) 439, 611, 892, 1088, 1109
AgsI TTSAA 9 cut(s) 12, 248, 283, 652, 685, 692, 755, 799, 974
AjnI CCWGG 1 cut(s) 1026
AjuI GAANNNNNNNTTGG 2 cut(s) 240, 272
AluBI AGCT 8 cut(s) 149, 308, 401, 567, 777, 872, 909, 959
AluI AGCT 8 cut(s) 149, 308, 401, 567, 777, 872, 909, 959
Alw21I GWGCWC 1 cut(s) 316
Alw26I GTCTC 2 cut(s) 350, 1061
AlwI GGATC 4 cut(s) 104, 715, 897, 1139
AoxI GGCC 1 cut(s) 202
ApeKI GCWGC 6 cut(s) 26, 572, 842, 872, 875, 1007
ApoI RAATTY 2 cut(s) 94, 248
AspLEI GCGC 1 cut(s) 680
AspS9I GGNCC 1 cut(s) 33
AsuHPI GGTGA 2 cut(s) 515, 720
AsuII TTCGAA 1 cut(s) 742
AvaII GGWCC 1 cut(s) 33
BaeGI GKGCMC 1 cut(s) 1126
BanII GRGCYC 1 cut(s) 331
BarI GAAGNNNNNNTAC 2 cut(s) 507, 539
Bbv12I GWGCWC 1 cut(s) 316
BbvI GCAGC 6 cut(s) 13, 559, 854, 859, 862, 994
BccI CCATC 3 cut(s) 457, 1112, 1156
BceAI ACGGC 2 cut(s) 211, 628
BciT130I CCWGG 1 cut(s) 1028
BcoDI GTCTC 2 cut(s) 350, 1061
BfaI CTAG 6 cut(s) 38, 146, 806, 932, 1019, 1053
BfmI CTRYAG 1 cut(s) 27
BglI GCCNNNNNGGC 1 cut(s) 590
BisI GCNGC 6 cut(s) 27, 573, 843, 873, 876, 1008
BlpI GCTNAGC 2 cut(s) 337, 1047
BlsI GCNGC 6 cut(s) 28, 574, 844, 874, 877, 1009
BmcAI AGTACT 2 cut(s) 647, 1191
Bme1390I CCNGG 1 cut(s) 1028
Bme18I GGWCC 1 cut(s) 33
BmgT120I GGNCC 1 cut(s) 33
BmiI GGNNCC 5 cut(s) 34, 35, 366, 603, 1197
BmrFI CCNGG 1 cut(s) 1028
BmrI ACTGGG 2 cut(s) 278, 369
BmsI GCATC 3 cut(s) 818, 1031, 1122
BmuI ACTGGG 2 cut(s) 278, 369
BoxI GACNNNNGTC 1 cut(s) 554
BplI GAGNNNNNCTC 2 cut(s) 652, 684
BpmI CTGGAG 1 cut(s) 372
Bpu1102I GCTNAGC 2 cut(s) 337, 1047
Bpu14I TTCGAA 1 cut(s) 742
BpuEI CTTGAG 1 cut(s) 103
Bsa29I ATCGAT 1 cut(s) 1116
BsaAI YACGTR 1 cut(s) 1163
BsaJI CCNNGG 3 cut(s) 610, 635, 1026
Bsc4I CCNNNNNNNGG 5 cut(s) 439, 611, 892, 1088, 1109
Bse1I ACTGG 6 cut(s) 273, 364, 673, 1103, 1187, 1197
BseBI CCWGG 1 cut(s) 1028
BseCI ATCGAT 1 cut(s) 1116
BseDI CCNNGG 3 cut(s) 610, 635, 1026
BseGI GGATG 5 cut(s) 126, 465, 517, 631, 1022
BseLI CCNNNNNNNGG 5 cut(s) 439, 611, 892, 1088, 1109
BseMII CTCAG 3 cut(s) 410, 708, 792
BseNI ACTGG 6 cut(s) 273, 364, 673, 1103, 1187, 1197
BseSI GKGCMC 1 cut(s) 1126
BseXI GCAGC 6 cut(s) 13, 559, 854, 859, 862, 994
BsgI GTGCAG 1 cut(s) 1232
BshFI GGCC 1 cut(s) 204
BshVI ATCGAT 1 cut(s) 1116
BsiHKAI GWGCWC 1 cut(s) 316
BslFI GGGAC 3 cut(s) 19, 156, 1165
BslI CCNNNNNNNGG 5 cut(s) 439, 611, 892, 1088, 1109
BsmAI GTCTC 2 cut(s) 350, 1061
BsmBI CGTCTC 1 cut(s) 1061
BsmFI GGGAC 3 cut(s) 19, 156, 1165
BsmI GAATGC 2 cut(s) 767, 1048
BsnI GGCC 1 cut(s) 204
Bsp119I TTCGAA 1 cut(s) 742
Bsp1286I GDGCHC 3 cut(s) 316, 331, 1126
Bsp1407I TGTACA 1 cut(s) 986
Bsp143I GATC 5 cut(s) 109, 505, 720, 902, 1144
Bsp1720I GCTNAGC 2 cut(s) 337, 1047
Bsp19I CCATGG 1 cut(s) 635
BspACI CCGC 2 cut(s) 893, 1094
BspANI GGCC 1 cut(s) 204
BspCNI CTCAG 3 cut(s) 411, 709, 791
BspDI ATCGAT 1 cut(s) 1116
BspLI GGNNCC 5 cut(s) 34, 35, 366, 603, 1197
BspMAI CTGCAG 1 cut(s) 31
BspPI GGATC 4 cut(s) 104, 715, 897, 1139
BspT104I TTCGAA 1 cut(s) 742
BsrBI CCGCTC 1 cut(s) 1094
BsrGI TGTACA 1 cut(s) 986
BsrI ACTGG 6 cut(s) 273, 364, 673, 1103, 1187, 1197
BssECI CCNNGG 3 cut(s) 610, 635, 1026
BssMI GATC 5 cut(s) 109, 505, 720, 902, 1144
BssT1I CCWWGG 1 cut(s) 635
Bst2UI CCWGG 1 cut(s) 1028
Bst4CI ACNGT 2 cut(s) 232, 769
Bst6I CTCTTC 2 cut(s) 173, 510
BstAUI TGTACA 1 cut(s) 986
BstBAI YACGTR 1 cut(s) 1163
BstBI TTCGAA 1 cut(s) 742
BstC8I GCNNGC 1 cut(s) 945
BstDEI CTNAG 5 cut(s) 337, 419, 717, 778, 1047
BstDSI CCRYGG 2 cut(s) 610, 635
BstF5I GGATG 5 cut(s) 126, 465, 517, 631, 1022
BstHHI GCGC 1 cut(s) 680
BstKTI GATC 5 cut(s) 112, 508, 723, 905, 1147
BstMAI GTCTC 2 cut(s) 350, 1061
BstMBI GATC 5 cut(s) 109, 505, 720, 902, 1144
BstMWI GCNNNNNNNGC 5 cut(s) 581, 590, 669, 1007, 1028
BstNI CCWGG 1 cut(s) 1028
BstPAI GACNNNNGTC 1 cut(s) 554
BstSCI CCNGG 1 cut(s) 1026
BstSFI CTRYAG 1 cut(s) 27
BstSLI GKGCMC 1 cut(s) 1126
BstV1I GCAGC 6 cut(s) 13, 559, 854, 859, 862, 994
BstX2I RGATCY 3 cut(s) 720, 902, 1144
BstYI RGATCY 3 cut(s) 720, 902, 1144
Bsu15I ATCGAT 1 cut(s) 1116
BsuRI GGCC 1 cut(s) 204
BsuTUI ATCGAT 1 cut(s) 1116
BtgI CCRYGG 2 cut(s) 610, 635
BtgZI GCGATG 1 cut(s) 317
BtsCI GGATG 5 cut(s) 126, 465, 517, 631, 1022
BtsI GCAGTG 1 cut(s) 919
BtsIMutI CAGTG 3 cut(s) 266, 680, 919
Cac8I GCNNGC 1 cut(s) 945
CfoI GCGC 1 cut(s) 680
Cfr13I GGNCC 1 cut(s) 33
ClaI ATCGAT 1 cut(s) 1116
CseI GACGC 1 cut(s) 1078
Csp6I GTAC 4 cut(s) 524, 646, 987, 1190
CviAII CATG 3 cut(s) 17, 636, 1130
CviQI GTAC 4 cut(s) 524, 646, 987, 1190
DdeI CTNAG 5 cut(s) 337, 419, 717, 778, 1047
DpnI GATC 5 cut(s) 111, 507, 722, 904, 1146
DpnII GATC 5 cut(s) 109, 505, 720, 902, 1144
DraI TTTAAA 2 cut(s) 136, 181
Eam1104I CTCTTC 2 cut(s) 173, 510
EarI CTCTTC 2 cut(s) 173, 510
Eco130I CCWWGG 1 cut(s) 635
Eco24I GRGCYC 1 cut(s) 331
Eco47I GGWCC 1 cut(s) 33
Eco57I CTGAAG 1 cut(s) 834
EcoO109I RGGNCCY 1 cut(s) 33
EcoRII CCWGG 1 cut(s) 1026
EcoT14I CCWWGG 1 cut(s) 635
EcoT38I GRGCYC 1 cut(s) 331
ErhI CCWWGG 1 cut(s) 635
Esp3I CGTCTC 1 cut(s) 1061
FaeI CATG 3 cut(s) 20, 639, 1133
FaqI GGGAC 3 cut(s) 19, 156, 1165
FatI CATG 3 cut(s) 16, 635, 1129
Fnu4HI GCNGC 6 cut(s) 27, 573, 843, 873, 876, 1008
FokI GGATG 5 cut(s) 133, 472, 524, 618, 1009
FriOI GRGCYC 1 cut(s) 331
Fsp4HI GCNGC 6 cut(s) 27, 573, 843, 873, 876, 1008
FspBI CTAG 6 cut(s) 38, 146, 806, 932, 1019, 1053
GlaI GCGC 1 cut(s) 679
GluI GCNGC 6 cut(s) 27, 573, 843, 873, 876, 1008
GsuI CTGGAG 1 cut(s) 372
HaeIII GGCC 1 cut(s) 204
HgaI GACGC 1 cut(s) 1078
HhaI GCGC 1 cut(s) 680
Hin1II CATG 3 cut(s) 20, 639, 1133
Hin6I GCGC 1 cut(s) 678
HinP1I GCGC 1 cut(s) 678
HinfI GANTC 5 cut(s) 124, 423, 534, 667, 692
HphI GGTGA 2 cut(s) 515, 720
Hpy166II GTNNAC 1 cut(s) 1160
Hpy188I TCNGA 6 cut(s) 623, 718, 781, 814, 821, 902
Hpy188III TCNNGA 4 cut(s) 351, 418, 509, 538
Hpy8I GTNNAC 1 cut(s) 1160
HpyAV CCTTC 4 cut(s) 111, 691, 793, 1092
HpyCH4III ACNGT 2 cut(s) 232, 769
HpyCH4IV ACGT 1 cut(s) 1162
HpyCH4V TGCA 5 cut(s) 29, 765, 924, 943, 1213
HpyF10VI GCNNNNNNNGC 5 cut(s) 581, 590, 669, 1007, 1028
HpyF3I CTNAG 5 cut(s) 337, 419, 717, 778, 1047
HpySE526I ACGT 1 cut(s) 1162
Hsp92II CATG 3 cut(s) 20, 639, 1133
HspAI GCGC 1 cut(s) 678
KflI GGGWCCC 1 cut(s) 33
Kzo9I GATC 5 cut(s) 109, 505, 720, 902, 1144
LmnI GCTCC 6 cut(s) 260, 364, 660, 950, 1091, 1201
Lsp1109I GCAGC 6 cut(s) 13, 559, 854, 859, 862, 994
LweI GCATC 3 cut(s) 818, 1031, 1122
MaeI CTAG 6 cut(s) 38, 146, 806, 932, 1019, 1053
MaeII ACGT 1 cut(s) 1162
MaeIII GTNAC 4 cut(s) 162, 409, 664, 1057
MalI GATC 5 cut(s) 111, 507, 722, 904, 1146
MbiI CCGCTC 1 cut(s) 1094
MboI GATC 5 cut(s) 109, 505, 720, 902, 1144
MboII GAAGA 3 cut(s) 160, 527, 1004
MflI RGATCY 3 cut(s) 720, 902, 1144
MhlI GDGCHC 3 cut(s) 316, 331, 1126
MlyI GAGTC 1 cut(s) 661
MmeI TCCRAC 2 cut(s) 52, 238
MnlI CCTC 7 cut(s) 78, 438, 511, 534, 724, 861, 896
MseI TTAA 6 cut(s) 135, 180, 227, 302, 438, 1038
MspA1I CMGCKG 1 cut(s) 308
MspR9I CCNGG 1 cut(s) 1028
Mva1269I GAATGC 2 cut(s) 767, 1048
MvaI CCWGG 1 cut(s) 1028
MwoI GCNNNNNNNGC 5 cut(s) 581, 590, 669, 1007, 1028
NcoI CCATGG 1 cut(s) 635
NdeII GATC 5 cut(s) 109, 505, 720, 902, 1144
NlaIII CATG 3 cut(s) 20, 639, 1133
NlaIV GGNNCC 5 cut(s) 34, 35, 366, 603, 1197
NmuCI GTSAC 3 cut(s) 162, 664, 1057
NspV TTCGAA 1 cut(s) 742
PctI GAATGC 2 cut(s) 767, 1048
PfeI GAWTC 4 cut(s) 124, 423, 534, 692
PkrI GCNGC 6 cut(s) 28, 574, 844, 874, 877, 1009
PleI GAGTC 1 cut(s) 661
PpsI GAGTC 1 cut(s) 661
Ppu21I YACGTR 1 cut(s) 1163
PpuMI RGGWCCY 1 cut(s) 33
PshAI GACNNNNGTC 1 cut(s) 554
PsiI TTATAA 2 cut(s) 395, 1136
Psp5II RGGWCCY 1 cut(s) 33
Psp6I CCWGG 1 cut(s) 1026
PspGI CCWGG 1 cut(s) 1026
PspN4I GGNNCC 5 cut(s) 34, 35, 366, 603, 1197
PspPI GGNCC 1 cut(s) 33
PspPPI RGGWCCY 1 cut(s) 33
PstI CTGCAG 1 cut(s) 31
PsuI RGATCY 3 cut(s) 720, 902, 1144
PvuII CAGCTG 1 cut(s) 308
RsaI GTAC 4 cut(s) 525, 647, 988, 1191
RsaNI GTAC 4 cut(s) 524, 646, 987, 1190
SaqAI TTAA 6 cut(s) 135, 180, 227, 302, 438, 1038
SatI GCNGC 6 cut(s) 27, 573, 843, 873, 876, 1008
Sau3AI GATC 5 cut(s) 109, 505, 720, 902, 1144
Sau96I GGNCC 1 cut(s) 33
ScaI AGTACT 2 cut(s) 647, 1191
SchI GAGTC 1 cut(s) 661
ScrFI CCNGG 1 cut(s) 1028
SduI GDGCHC 3 cut(s) 316, 331, 1126
SfaNI GCATC 3 cut(s) 818, 1031, 1122
SfcI CTRYAG 1 cut(s) 27
SfuI TTCGAA 1 cut(s) 742
SinI GGWCC 1 cut(s) 33
SmlI CTYRAG 1 cut(s) 82
SmoI CTYRAG 1 cut(s) 82
SsiI CCGC 2 cut(s) 893, 1094
SspMI CTAG 6 cut(s) 38, 146, 806, 932, 1019, 1053
StyD4I CCNGG 1 cut(s) 1026
StyI CCWWGG 1 cut(s) 635
TaaI ACNGT 2 cut(s) 232, 769
TaiI ACGT 1 cut(s) 1165
TaqI TCGA 4 cut(s) 537, 548, 742, 1116
TatI WGTACW 3 cut(s) 645, 986, 1189
TfiI GAWTC 4 cut(s) 124, 423, 534, 692
Tru1I TTAA 6 cut(s) 135, 180, 227, 302, 438, 1038
Tru9I TTAA 6 cut(s) 135, 180, 227, 302, 438, 1038
TscAI CASTG 3 cut(s) 273, 680, 926
TseFI GTSAC 3 cut(s) 162, 664, 1057
TseI GCWGC 6 cut(s) 26, 572, 842, 872, 875, 1007
Tsp45I GTSAC 3 cut(s) 162, 664, 1057
TspDTI ATGAA 4 cut(s) 33, 116, 415, 528
TspRI CASTG 3 cut(s) 273, 680, 926
VpaK11BI GGWCC 1 cut(s) 33
XapI RAATTY 2 cut(s) 94, 248
XspI CTAG 6 cut(s) 38, 146, 806, 932, 1019, 1053
ZrmI AGTACT 2 cut(s) 647, 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.