Rmu_sc0002591.1_g000001

aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002591.1
Physical Location & Seq
Reverse (-)
6235 .. 8781
2547 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002591.1_g000001.1.cds

Sequence Viewer

Length: 1320 bp
atggcatcttcaaataatgaccatgatcaggttaaagcagcaggactcttcgagaggttatgggggaagataattaagttcggcttgatgttaaaaaaactagggcaagatgatccaagaagaattgttcattctcttaaagtggcactagctcttacattggtctccatgttattctactttgaaccactgtatgaaggtttaggtcttgctgctatgtgggctattctgactgttgtggtcgtttttgaattttctgttggacgaggtttgaatagaatgatgtctactgtagtagctgctgctcttggcattggagctcatcgattagcaactctgacaggaaatcaaggagagcctatacttattgctctctttgtcttcgtagaagctggaatagtgacattcttcagattcattccccaaatgaaggcaagatacgattatgggctgctgatattcaacgtgacgttctgcctggtatcggtgtctggatatcgtgacaaagaggtcatacaaatgggattcgaaagggtatgtaccatcaccattggaggctgtatcgctgttgctgtttgtgttttcattcgtccagtatggataggggtggagcttcacaatcggatttctaccaacatggaaaagctggccaatttcttagaagaatttggagatgaatactttaaagtatctgaaaatgagcagaccagagagaagtcatcgtttcttgaaggatataaaagtgttctaacttcaaaaggcagtgaaaactctatggctaatttggcaagatgggaaccgggccatgggaatttcagatttcgtcatccatgggaacaatacttgaaagttggaacccttactcgccaatgtgcgttcaaaattgaagctctcaacaactaccttacctctgaaacccaaacacctcaggaagttaaaagcataatacaagggccaagcgtgattataagctcagagtgtgggaaagcattgaaggagttagcaacctcactgaagaaaatgaccaaatcatcctcaaatgagcctcatattgcaaagtcgaaagatgctgctgaggaactcaaagctgttataagatcaagcttgcgtaaacacccagctgattctctacatataatacaagaaggtgcagtggcttcactactccttgaaattatcacatgtatagagaaaattgccgacgctgctcataaactagcataccaagcacattttaaggatgtaaagcctacagtgaaaccggaccaggaaaactccgtgaatgatgtgccacaccatgttattacaattgagggataa

Protein Analysis

439

Amino Acids

48.84

Weight (kDa)

8.34

Isoelectric Point (pI)

28.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000374)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08430 AT1G08440 AT2G27240 AT2G27240 AT4G17585
fragaria_vesca FvH4_3g26440 FvH4_3g26440 FvH4_3g26490 FvH4_3g26520 FvH4_3g26530 FvH4_6g51850 FvH4_6g51860
malus_domestica MD00G1017600.v1.1 MD00G1049200.v1.1 MD00G1049700.v1.1 MD03G1155200.v1.1 MD03G1155400.v1.1 MD03G1155500.v1.1 MD11G1173000.v1.1
prunus_persica Prupe.6G144000_v2.0.a1 Prupe.6G144100_v2.0.a1 Prupe.6G144200_v2.0.a1
pyrus_communis pycom03g10930 pycom11g14730
rosa_chinensis RchiOBHm_Chr5g0048251 RchiOBHm_Chr5g0048321 RchiOBHm_Chr5g0048411 RchiOBHm_Chr5g0048431 RchiOBHm_Chr5g0048441 RchiOBHm_Chr5g0048461 RchiOBHm_Chr5g0048471 RchiOBHm_Chr5g0048481
rosa_laevigata RLG00000034506 RLG00000034507 RLG00000034512 RLG00000034514 RLG00000034515 RLG00000034517 RLG00000034519 RLG00000034523 RLG00000034525
rosa_multiflora Rmu_sc0000398.1_g000002 Rmu_sc0001240.1_g000004 Rmu_sc0001240.1_g000016 Rmu_sc0002563.1_g000001 Rmu_sc0002563.1_g000017 Rmu_sc0002563.1_g000037 Rmu_sc0002563.1_g000048 Rmu_sc0002563.1_g000055 Rmu_sc0002563.1_g000073 Rmu_sc0002591.1_g000001 Rmu_sc0002591.1_g000037 Rmu_sc0002591.1_g000045
rosa_roxburghii Rroxscaffold_1G00033370 Rroxscaffold_1G00033390 Rroxscaffold_1G00033420 Rroxscaffold_1G00033440 Rroxscaffold_1G00033450 Rroxscaffold_1G00033530 Rroxscaffold_1G00033600
rosa_rugosa Rorug05G0237500 Rorug05G0237700 Rorug05G0237800 Rorug05G0238000 Rorug05G0238200 Rorug05G0238300
rosa_samantha Rh5AG316700 Rh5AG316900 Rh5AG317100 Rh5AG317400 Rh5AG317500 Rh5AG317800 Rh5AG318200 Rh5AG318500 Rh5BG327700 Rh5BG327800 Rh5BG327900 Rh5BG328100 Rh5BG328200 Rh5BG328500 Rh5BG328600 Rh5CG353400 Rh5CG353500 Rh5CG353600 Rh5CG353800 Rh5CG354100 Rh5CG354300 Rh5CG354600 Rh5DG338400 Rh5DG338900 Rh5DG339000 Rh5DG339200 Rh5DG339300 Rh5DG339400 Rh5DG339600 Rh5DG339700
rosa_wichuraiana Rw5G029670 Rw5G029690 Rw5G029700 Rw5G029720 Rw5G029730 Rw5G029750 Rw5G029760 Rw5G029770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 968, 1094
AasI GACNNNNNNGTC 1 cut(s) 509
AccI GTMKAC 1 cut(s) 287
AclWI GGATC 1 cut(s) 107
AcoI YGGCCR 1 cut(s) 648
AcsI RAATTY 3 cut(s) 251, 665, 811
AcuI CTGAAG 2 cut(s) 394, 1034
AfaI GTAC 1 cut(s) 541
AfiI CCNNNNNNNGG 4 cut(s) 28, 430, 484, 806
AflIII ACRYGT 1 cut(s) 1181
AjnI CCWGG 2 cut(s) 477, 1266
AjuI GAANNNNNNNTTGG 2 cut(s) 243, 275
Alw21I GWGCWC 1 cut(s) 322
Alw26I GTCTC 1 cut(s) 169
AlwI GGATC 1 cut(s) 107
AoxI GGCC 3 cut(s) 648, 802, 953
ApeKI GCWGC 7 cut(s) 38, 212, 299, 302, 451, 1070, 1205
ApoI RAATTY 3 cut(s) 251, 665, 811
AspS9I GGNCC 3 cut(s) 802, 953, 1264
AsuC2I CCSGG 1 cut(s) 801
AsuHPI GGTGA 1 cut(s) 538
AsuII TTCGAA 1 cut(s) 528
AvaII GGWCC 1 cut(s) 1264
AxyI CCTNAGG 1 cut(s) 927
BalI TGGCCA 1 cut(s) 650
BanII GRGCYC 1 cut(s) 322
BarI GAAGNNNNNNTAC 2 cut(s) 422, 454
BbsI GAAGAC 1 cut(s) 373
Bbv12I GWGCWC 1 cut(s) 322
BbvCI CCTCAGC 1 cut(s) 1074
BbvI GCAGC 7 cut(s) 50, 199, 286, 289, 438, 1057, 1192
BccI CCATC 2 cut(s) 551, 786
BciT130I CCWGG 2 cut(s) 479, 1268
BclI TGATCA 1 cut(s) 25
BcnI CCSGG 1 cut(s) 801
BcoDI GTCTC 1 cut(s) 169
BfaI CTAG 3 cut(s) 101, 149, 1217
BfmI CTRYAG 2 cut(s) 291, 1251
BisI GCNGC 7 cut(s) 39, 213, 300, 303, 452, 1071, 1206
BlsI GCNGC 7 cut(s) 40, 214, 301, 304, 453, 1072, 1207
Bme1390I CCNGG 3 cut(s) 479, 801, 1268
Bme18I GGWCC 1 cut(s) 1264
BmgT120I GGNCC 3 cut(s) 802, 953, 1264
BmiI GGNNCC 2 cut(s) 798, 856
BmrFI CCNGG 3 cut(s) 479, 801, 1268
BmsI GCATC 2 cut(s) 14, 1057
BpiI GAAGAC 1 cut(s) 373
Bpu10I CCTNAGC 1 cut(s) 1074
Bpu14I TTCGAA 1 cut(s) 528
BpuMI CCSGG 1 cut(s) 801
Bsa29I ATCGAT 1 cut(s) 325
BsaI GGTCTC 1 cut(s) 169
BsaJI CCNNGG 2 cut(s) 805, 830
BsaWI WCCGGW 1 cut(s) 1261
Bsc4I CCNNNNNNNGG 4 cut(s) 28, 430, 484, 806
Bse1I ACTGG 1 cut(s) 593
Bse21I CCTNAGG 1 cut(s) 927
BseBI CCWGG 2 cut(s) 479, 1268
BseCI ATCGAT 1 cut(s) 325
BseDI CCNNGG 2 cut(s) 805, 830
BseGI GGATG 3 cut(s) 826, 1031, 1246
BseLI CCNNNNNNNGG 4 cut(s) 28, 430, 484, 806
BseMII CTCAG 3 cut(s) 941, 987, 1065
BseNI ACTGG 1 cut(s) 593
BseXI GCAGC 7 cut(s) 50, 199, 286, 289, 438, 1057, 1192
BseYI CCCAGC 1 cut(s) 1117
BsgI GTGCAG 1 cut(s) 1170
BshFI GGCC 3 cut(s) 650, 804, 955
BshVI ATCGAT 1 cut(s) 325
BsiHKAI GWGCWC 1 cut(s) 322
BsiSI CCGG 2 cut(s) 800, 1262
BslI CCNNNNNNNGG 4 cut(s) 28, 430, 484, 806
BsmAI GTCTC 1 cut(s) 169
BsnI GGCC 3 cut(s) 650, 804, 955
Bso31I GGTCTC 1 cut(s) 169
Bsp119I TTCGAA 1 cut(s) 528
Bsp1286I GDGCHC 1 cut(s) 322
Bsp143I GATC 3 cut(s) 25, 112, 1097
Bsp19I CCATGG 2 cut(s) 805, 830
BspANI GGCC 3 cut(s) 650, 804, 955
BspCNI CTCAG 3 cut(s) 940, 986, 1066
BspDI ATCGAT 1 cut(s) 325
BspLI GGNNCC 2 cut(s) 798, 856
BspPI GGATC 1 cut(s) 107
BspT104I TTCGAA 1 cut(s) 528
BspTNI GGTCTC 1 cut(s) 169
BsrI ACTGG 1 cut(s) 593
BssECI CCNNGG 2 cut(s) 805, 830
BssMI GATC 3 cut(s) 25, 112, 1097
BssT1I CCWWGG 2 cut(s) 805, 830
Bst2UI CCWGG 2 cut(s) 479, 1268
Bst4CI ACNGT 4 cut(s) 192, 235, 292, 1255
Bst6I CTCTTC 1 cut(s) 53
BstBI TTCGAA 1 cut(s) 528
BstC8I GCNNGC 2 cut(s) 648, 1106
BstDEI CTNAG 4 cut(s) 658, 927, 973, 1074
BstDSI CCRYGG 2 cut(s) 805, 830
BstF5I GGATG 3 cut(s) 826, 1031, 1246
BstKTI GATC 3 cut(s) 28, 115, 1100
BstMAI GTCTC 1 cut(s) 169
BstMBI GATC 3 cut(s) 25, 112, 1097
BstMWI GCNNNNNNNGC 4 cut(s) 221, 785, 1205, 1226
BstNI CCWGG 2 cut(s) 479, 1268
BstNSI RCATGY 1 cut(s) 1185
BstSCI CCNGG 3 cut(s) 477, 799, 1266
BstSFI CTRYAG 2 cut(s) 291, 1251
BstV1I GCAGC 7 cut(s) 50, 199, 286, 289, 438, 1057, 1192
BstV2I GAAGAC 1 cut(s) 373
Bsu15I ATCGAT 1 cut(s) 325
Bsu36I CCTNAGG 1 cut(s) 927
BsuRI GGCC 3 cut(s) 650, 804, 955
BsuTUI ATCGAT 1 cut(s) 325
BtgI CCRYGG 2 cut(s) 805, 830
BtsCI GGATG 3 cut(s) 826, 1031, 1246
BtsI GCAGTG 2 cut(s) 769, 1158
BtsIMutI CAGTG 5 cut(s) 188, 769, 1010, 1158, 1260
Cac8I GCNNGC 2 cut(s) 648, 1106
Cfr13I GGNCC 3 cut(s) 802, 953, 1264
ClaI ATCGAT 1 cut(s) 325
CseI GACGC 1 cut(s) 1211
Csp6I GTAC 1 cut(s) 540
CviAII CATG 7 cut(s) 23, 169, 637, 806, 831, 1182, 1298
CviQI GTAC 1 cut(s) 540
DdeI CTNAG 4 cut(s) 658, 927, 973, 1074
DpnI GATC 3 cut(s) 27, 114, 1099
DpnII GATC 3 cut(s) 25, 112, 1097
DraI TTTAAA 1 cut(s) 685
DrdI GACNNNNNNGTC 1 cut(s) 509
DseDI GACNNNNNNGTC 1 cut(s) 509
EaeI YGGCCR 1 cut(s) 648
Eam1104I CTCTTC 1 cut(s) 53
EarI CTCTTC 1 cut(s) 53
Ecl136II GAGCTC 1 cut(s) 320
Eco130I CCWWGG 2 cut(s) 805, 830
Eco24I GRGCYC 1 cut(s) 322
Eco31I GGTCTC 1 cut(s) 169
Eco32I GATATC 1 cut(s) 497
Eco47I GGWCC 1 cut(s) 1264
Eco53kI GAGCTC 1 cut(s) 320
Eco57I CTGAAG 2 cut(s) 394, 1034
Eco81I CCTNAGG 1 cut(s) 927
EcoICRI GAGCTC 1 cut(s) 320
EcoRII CCWGG 2 cut(s) 477, 1266
EcoRV GATATC 1 cut(s) 497
EcoT14I CCWWGG 2 cut(s) 805, 830
EcoT38I GRGCYC 1 cut(s) 322
ErhI CCWWGG 2 cut(s) 805, 830
FaeI CATG 7 cut(s) 26, 172, 640, 809, 834, 1185, 1301
FalI AAGNNNNNCTT 2 cut(s) 68, 100
FatI CATG 7 cut(s) 22, 168, 636, 805, 830, 1181, 1297
FbaI TGATCA 1 cut(s) 25
FblI GTMKAC 1 cut(s) 287
Fnu4HI GCNGC 7 cut(s) 39, 213, 300, 303, 452, 1071, 1206
FokI GGATG 3 cut(s) 813, 1018, 1253
FriOI GRGCYC 1 cut(s) 322
Fsp4HI GCNGC 7 cut(s) 39, 213, 300, 303, 452, 1071, 1206
FspBI CTAG 3 cut(s) 101, 149, 1217
GluI GCNGC 7 cut(s) 39, 213, 300, 303, 452, 1071, 1206
GsaI CCCAGC 1 cut(s) 1121
HaeIII GGCC 3 cut(s) 650, 804, 955
HapII CCGG 2 cut(s) 800, 1262
HgaI GACGC 1 cut(s) 1211
Hin1II CATG 7 cut(s) 26, 172, 640, 809, 834, 1185, 1301
HindIII AAGCTT 1 cut(s) 1102
HinfI GANTC 4 cut(s) 45, 414, 525, 1124
HpaII CCGG 2 cut(s) 800, 1262
HphI GGTGA 1 cut(s) 538
Hpy166II GTNNAC 2 cut(s) 288, 1112
Hpy188I TCNGA 8 cut(s) 231, 339, 413, 624, 694, 818, 913, 976
Hpy188III TCNNGA 5 cut(s) 52, 492, 500, 728, 929
Hpy8I GTNNAC 2 cut(s) 288, 1112
Hpy99I CGWCG 1 cut(s) 1205
HpyAV CCTTC 5 cut(s) 191, 424, 725, 988, 1139
HpyCH4III ACNGT 4 cut(s) 192, 235, 292, 1255
HpyCH4IV ACGT 2 cut(s) 465, 470
HpyCH4V TGCA 2 cut(s) 1055, 1151
HpyF10VI GCNNNNNNNGC 4 cut(s) 221, 785, 1205, 1226
HpyF3I CTNAG 4 cut(s) 658, 927, 973, 1074
HpySE526I ACGT 2 cut(s) 465, 470
Hsp92II CATG 7 cut(s) 26, 172, 640, 809, 834, 1185, 1301
Ksp22I TGATCA 1 cut(s) 25
Kzo9I GATC 3 cut(s) 25, 112, 1097
LmnI GCTCC 2 cut(s) 317, 610
Lsp1109I GCAGC 7 cut(s) 50, 199, 286, 289, 438, 1057, 1192
LweI GCATC 2 cut(s) 14, 1057
MaeI CTAG 3 cut(s) 101, 149, 1217
MaeII ACGT 2 cut(s) 465, 470
MaeIII GTNAC 3 cut(s) 400, 466, 500
MalI GATC 3 cut(s) 27, 114, 1099
MboI GATC 3 cut(s) 25, 112, 1097
MboII GAAGA 7 cut(s) 40, 79, 132, 373, 400, 674, 1027
MfeI CAATTG 1 cut(s) 1308
MhlI GDGCHC 1 cut(s) 322
MlsI TGGCCA 1 cut(s) 650
MluNI TGGCCA 1 cut(s) 650
MlyI GAGTC 1 cut(s) 39
MmeI TCCRAC 2 cut(s) 241, 832
Mox20I TGGCCA 1 cut(s) 650
MscI TGGCCA 1 cut(s) 650
MseI TTAA 7 cut(s) 33, 75, 92, 138, 684, 936, 1236
MslI CAYNNNNRTG 1 cut(s) 518
Msp20I TGGCCA 1 cut(s) 650
MspA1I CMGCKG 1 cut(s) 1121
MspI CCGG 2 cut(s) 800, 1262
MspR9I CCNGG 3 cut(s) 479, 801, 1268
MunI CAATTG 1 cut(s) 1308
MvaI CCWGG 2 cut(s) 479, 1268
MwoI GCNNNNNNNGC 4 cut(s) 221, 785, 1205, 1226
NciI CCSGG 1 cut(s) 801
NcoI CCATGG 2 cut(s) 805, 830
NdeII GATC 3 cut(s) 25, 112, 1097
NlaIII CATG 7 cut(s) 26, 172, 640, 809, 834, 1185, 1301
NlaIV GGNNCC 2 cut(s) 798, 856
NmuCI GTSAC 3 cut(s) 400, 466, 500
NspI RCATGY 1 cut(s) 1185
NspV TTCGAA 1 cut(s) 528
PciI ACATGT 1 cut(s) 1181
PfeI GAWTC 3 cut(s) 414, 525, 1124
PkrI GCNGC 7 cut(s) 40, 214, 301, 304, 453, 1072, 1207
PleI GAGTC 1 cut(s) 39
PpsI GAGTC 1 cut(s) 39
PscI ACATGT 1 cut(s) 1181
PsiI TTATAA 2 cut(s) 968, 1094
Psp124BI GAGCTC 1 cut(s) 322
Psp6I CCWGG 2 cut(s) 477, 1266
PspFI CCCAGC 1 cut(s) 1117
PspGI CCWGG 2 cut(s) 477, 1266
PspN4I GGNNCC 2 cut(s) 798, 856
PspPI GGNCC 3 cut(s) 802, 953, 1264
PvuII CAGCTG 1 cut(s) 1121
RsaI GTAC 1 cut(s) 541
RsaNI GTAC 1 cut(s) 540
RseI CAYNNNNRTG 1 cut(s) 518
SacI GAGCTC 1 cut(s) 322
SaqAI TTAA 7 cut(s) 33, 75, 92, 138, 684, 936, 1236
SatI GCNGC 7 cut(s) 39, 213, 300, 303, 452, 1071, 1206
Sau3AI GATC 3 cut(s) 25, 112, 1097
Sau96I GGNCC 3 cut(s) 802, 953, 1264
SchI GAGTC 1 cut(s) 39
ScrFI CCNGG 3 cut(s) 479, 801, 1268
SduI GDGCHC 1 cut(s) 322
SfaNI GCATC 2 cut(s) 14, 1057
SfcI CTRYAG 2 cut(s) 291, 1251
SfuI TTCGAA 1 cut(s) 528
SinI GGWCC 1 cut(s) 1264
SmiMI CAYNNNNRTG 1 cut(s) 518
SspMI CTAG 3 cut(s) 101, 149, 1217
SstI GAGCTC 1 cut(s) 322
StyD4I CCNGG 3 cut(s) 477, 799, 1266
StyI CCWWGG 2 cut(s) 805, 830
TaaI ACNGT 4 cut(s) 192, 235, 292, 1255
TaiI ACGT 2 cut(s) 468, 473
TaqI TCGA 4 cut(s) 51, 325, 528, 1061
TfiI GAWTC 3 cut(s) 414, 525, 1124
Tru1I TTAA 7 cut(s) 33, 75, 92, 138, 684, 936, 1236
Tru9I TTAA 7 cut(s) 33, 75, 92, 138, 684, 936, 1236
TscAI CASTG 5 cut(s) 195, 769, 1017, 1158, 1260
TseFI GTSAC 3 cut(s) 400, 466, 500
TseI GCWGC 7 cut(s) 38, 212, 299, 302, 451, 1070, 1205
Tsp45I GTSAC 3 cut(s) 400, 466, 500
TspDTI ATGAA 6 cut(s) 119, 210, 406, 443, 574, 690
TspGWI ACGGA 1 cut(s) 1267
TspRI CASTG 5 cut(s) 195, 769, 1017, 1158, 1260
VpaK11BI GGWCC 1 cut(s) 1264
XapI RAATTY 3 cut(s) 251, 665, 811
XceI RCATGY 1 cut(s) 1185
XmiI GTMKAC 1 cut(s) 287
XspI CTAG 3 cut(s) 101, 149, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.