AT1G20920

DEAD-box ATP-dependent RNA helicase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
7285042 .. 7289943
4902 bp
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UTR
Exon/CDS
Intron
AT1G20920.4

Sequence Viewer

Length: 3501 bp
ATGGAGGTAGAGAAATCCAAGTATAGGAGCGAAGATTTGGATGTGGTGGAGGAGGAGGCTGATTTGAAGAAGAGTCGGCGAGATCGTGATCGGAGTAATGAGCGGAAGAAGGATAAGGGTTCAGAGAAGCGTCGAGAGAAGGATAGGCGGAAGAAACGAGTTAAGAGTAGTGATTCTGAAGATGATTACGATAGAGATGATGATGAAGAGAGGGAGAAGCGTAAGGAGAAGGAGAGGGAGCGGAGACGGAGGGATAAGGATAGGGTGAAGAGACGGTCTGAGAGAAGGAAGAGTAGTGATTCTGAAGATGACGTTGAAGAAGAGGATGAGAGGGATAAACGCAGAGTGAATGAGAAGGAGAGAGGGCATCGAGAACATGAGAGAGATAGAGGCAAAGATAGGAAAAGGGATAGAGAGAGGGAAGAGAGGAAGGATAAAGAAAGAGAAAGGGAGAAGGATAGAGAGAGGAGAGAACGGGAACGGGAAGAGCGGGAGAAGGAGAGAGTTAAAGAAAGAGAAAGGCGGGAACGGGAAGATGGAGAGAGGGATAGGAGAGAGCGTGAGAAAGAAAGGGGTAGTAGGAGGAACCGGGAAAGGGAAAGGTCAAGAGAGGTGGGCAATGAAGAGAGTGATGATGATGTCAAGCGTGACTTGAAACGTAGAAGAAAAGAGGGCGGTGAACGGAAGGAGAAAGAGCGTGAAAAGAGTGTTGGCAGATCTAGCAGGCATGAAGATAGTCCAAAGAGAAAGAGTGTCGAGGATAATGGGGAAAAGAAAGAGAAGAAAACGCGAGAAGAAGAACTAGAGGATGAGCAGAAGAAGTTGGATGAGGAAGTGGAAAAACGAAGGAGAAGAGTCCAGGAGTGGCAAGAATTGAAGAGGAAGAAGGAGGAAGCTGAAAGTGAAAGTAAGGGTGATGCGGATGGTAATGAGCCCAAGGCCGGTAAGGCTTGGACTCTTGAAGGAGAATCTGATGATGAAGAAGGCCATCCGGAAGAAAAATCAGAAACAGAAATGGATGTTGATGAAGAGACTAAACCTGAAAATGATGGAGATGCTAAGATGGTAGACTTGGAGAATGAGACAGCTGCTACTGTCTCTGAGAGTGGAGGTGATGGAGCTGTAGATGAAGAGGAAATTGATCCTTTAGATGCTTTTATGAATACTATGGTATTACCTGAGGTTGAGAAGTTTTGCAATGGTGCTCCTCCCCCAGCAGTGAACGATGGTACTTTGGATTCTAAAATGAATGGGAAGGAAAGTGGTGACCGGCCAAAGAAAGGTTTTAATAAGGCCCTTGGTAGGATAATTCAAGGTGAAGATTCTGATTCTGATTATTCAGAACCAAAGAATGATGATGATCCAAGTTTAGACGAAGACGATGAGGAGTTCATGAAGAGAGTAAAGAAGACAAAAGCTGAGAAGTTGTCCCTTGTTGACCACTCAAAAATAGAGTATGAACCTTTCCGGAAGAACTTCTATATCGAAGTGAAGGATATCTCTAGGATGACACAAGAAGAAGTTAACACTTACAGAAAGGAATTGGAGCTGAAAGTTCATGGAAAGGATGTTCCAAGACCCATAAAGTTTTGGCACCAGACTGGGCTAACCAGCAAAATTTTGGATACTATGAAGAAGCTTAATTATGAAAAGCCAATGCCTATTCAAACACAAGCACTCCCTATCATCATGAGCGGTCGAGACTGCATTGGGGTTGCAAAAACCGGTTCAGGTAAAACCCTTGGTTTTGTTTTGCCAATGCTGAGGCATATTAAAGATCAGCCTCCCGTTGAAGCTGGTGATGGGCCAATTGGTCTTGTAATGGCACCTACTAGGGAGCTTGTTCAGCAGATTCACAGCGATATCAGAAAGTTTTCTAAGCCATTGGGTATAAGATGCGTCCCTGTGTATGGAGGATCAGGAGTTGCCCAGCAAATTAGTGAACTTAAGCGAGGTACTGAGATTGTTGTGTGCACTCCTGGGAGAATGATTGATATCCTTTGCACAAGCAGTGGGAAAATCACTAATCTGCGAAGAGTCACATTTTTGGTAATGGATGAAGCTGATCGTATGTTTGACATGGGTTTTGAGCCTCAAATTACTCGTATTATTCAGAACATTCGACCGGAACGCCAAACTGTGCTTTTTTCTGCCACTTTTCCACGCCAAGTTGAAACTTTGGCACGTAAAGTCTTGAACAAGCCTGTAGAAATACAGGTCGGTGGAAGGAGTGTTGTGAATAAGGATATAACTCAGTTAGTTGAAGTCAGACCGGAGAGTGATAGGTTCCTTAGACTTCTGGAACTTCTTGGGGAATGGTCTGAGAAAGGGAAAATTCTGGTCTTTGTTCAGTCGCAGGAAAAATGTGATGCCTTGTATAGGGATATGATTAAATCTAGTTACCCTTGTCTGTCTCTTCACGGGGGTAAGGATCAGACCGATCGTGAATCAACTATATCTGATTTTAAGAACGATGTCTGCAATTTGTTGATTGCCACAAGTGTTGCTGCTAGGGGTCTAGATGTGAAAGAGCTTGAGTTGGTTGTAAACTTTGATGCGCCGAACCACTATGAAGATTATGTGCATCGCGTTGGCAGGACAGGCAGGGCAGGGCGTAAGGGCTGTGCTGTGACATTTATCTCCGAGGATGATGCAAAATATGCACCAGATTTAGTCAAGGCCCTGGAGCTTTCTGAGCAGCCAGTTCCTGATGATCTGAAAGCACTTGCTGATGGTTTCATGGTGAAAGTGAAACAGGGTATTGAGCAAGCTCATGGAACTGGCTATGGTGGTAGTGGCTTTAAATTCAACGAAGAGGAGGAAGAAGTTAGAAAAGCAGCAAAGAAAGCACAAGCAAAGGAGTATGGCTTTGAGGAAGACAAGTCTGACTCAGAAGATGAGAATGATGTAGTAAGAAAGGCAGGTGGTGGTGAGATCTCACAGCAGCAGGCTACTTTTGCTCAGATAGCCGCCATTGCTGCTGCTGCCAAAGCTGCTGCTGCTGCTCCAGTGAGTGCTCCTGTGACAGCTAACCAATTACTGGCAAATGGTGGCGGGCTTGCTGCCATGCCAGGTGTCCTTCCGGTTACTGTTCCTACCCTTCCTAGTGAAGGGGCAGGCCGTGCTGCAGCCATGGTTGCTGCCATGAATCTGCAACATAATCTGGCAAAGATTCAAGCTGATGCAATGCCTGAGCACTATGAAGCAGAACTTGAAATCAATGACTTCCCACAAAATGCTCGTTGGAAGGTCACCCATAAAGAAACTTTGGGTCCAATATCAGAGTGGACTGGAGCTGCTATTACCACCAGGGGTCAGTTTTATCCTACAGGACGTATACCGGGACCTGGGGAACGGAAGCTGTACTTATTCATTGAAGGGCCTAGCGAAAAATCAGTTAAGCACGCAAAAGCTGAACTCAAGCGTGTTCTTGAAGACATTACGAATCAGGCCATGTCCTCACTTCCTGGAGGAGCATCCGGGAGATACTCAGTCCTTTAA

Protein Analysis

1166

Amino Acids

133.03

Weight (kDa)

5.69

Isoelectric Point (pI)

54.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 554 - 726 1e-49 DEAD/DEAH box helicase
Helicase_C PF00271 764 - 871 6.8e-29 Helicase conserved C-terminal domain
KH_12 PF23469 1068 - 1145 2.3e-13 KH-domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2912
Acc36I ACCTGC 1 cut(s) 2912
AccB1I GGYRCC 2 cut(s) 1593, 1825
AccB7I CCANNNNNTGG 1 cut(s) 3040
AccBSI CCGCTC 4 cut(s) 103, 241, 490, 1695
AccI GTMKAC 2 cut(s) 1068, 3337
AccII CGCG 2 cut(s) 790, 2589
AccIII TCCGGA 2 cut(s) 991, 1467
AclWI GGATC 4 cut(s) 1136, 1355, 1924, 2439
AcoI YGGCCR 1 cut(s) 1271
AcsI RAATTY 3 cut(s) 1617, 2334, 2804
AcuI CTGAAG 2 cut(s) 198, 324
AfaI GTAC 3 cut(s) 1231, 1957, 3365
AflII CTTAAG 1 cut(s) 1946
AgeI ACCGGT 1 cut(s) 1724
AjnI CCWGG 7 cut(s) 858, 1978, 2682, 3070, 3308, 3346, 3466
AjuI GAANNNNNNNTTGG 2 cut(s) 693, 725
AloI GAACNNNNNNTCC 2 cut(s) 1554, 1586
Alw21I GWGCWC 4 cut(s) 1207, 1976, 3019, 3198
Alw26I GTCTC 7 cut(s) 238, 265, 1025, 1076, 1102, 1695, 2418
Alw44I GTGCAC 1 cut(s) 1972
AlwI GGATC 4 cut(s) 1136, 1355, 1924, 2439
AlwNI CAGNNNCTG 1 cut(s) 2708
Aor13HI TCCGGA 2 cut(s) 991, 1467
AoxI GGCC 9 cut(s) 939, 985, 1271, 1293, 1805, 2679, 3118, 3380, 3450
ApaLI GTGCAC 1 cut(s) 1972
ApoI RAATTY 3 cut(s) 1617, 2334, 2804
ArsI GACNNNNNNTTYG 2 cut(s) 2069, 2101
AsiGI ACCGGT 1 cut(s) 1724
Asp700I GAANNNNTTC 2 cut(s) 1475, 1873
AspLEI GCGC 1 cut(s) 2560
AspS9I GGNCC 6 cut(s) 1294, 1805, 2680, 3272, 3344, 3380
AsuC2I CCSGG 3 cut(s) 590, 3342, 3481
AvaII GGWCC 2 cut(s) 3272, 3344
AxyI CCTNAGG 1 cut(s) 1179
BaeGI GKGCMC 1 cut(s) 1976
BanI GGYRCC 2 cut(s) 1593, 1825
BanII GRGCYC 1 cut(s) 936
BbsI GAAGAC 4 cut(s) 1383, 1415, 2883, 3441
Bbv12I GWGCWC 4 cut(s) 1207, 1976, 3019, 3198
BbvCI CCTCAGC 1 cut(s) 1763
BccI CCATC 9 cut(s) 530, 917, 996, 1043, 1057, 1109, 1220, 1796, 2726
BceAI ACGGC 1 cut(s) 3105
BcgI CGANNNNNNTGC 2 cut(s) 2633, 2667
BciT130I CCWGG 7 cut(s) 860, 1980, 2684, 3072, 3310, 3348, 3468
BciVI GTATCC 1 cut(s) 1618
BcnI CCSGG 3 cut(s) 590, 3342, 3481
BcoDI GTCTC 7 cut(s) 238, 265, 1025, 1076, 1102, 1695, 2418
BfaI CTAG 9 cut(s) 720, 803, 1503, 1833, 2397, 2511, 2519, 3105, 3384
BfmI CTRYAG 4 cut(s) 1122, 2205, 3126, 3327
BfrI CTTAAG 1 cut(s) 1946
BfuAI ACCTGC 1 cut(s) 2912
BfuI GTATCC 1 cut(s) 1618
BglI GCCNNNNNGGC 1 cut(s) 947
BglII AGATCT 2 cut(s) 716, 2934
Bme18I GGWCC 2 cut(s) 3272, 3344
BmgT120I GGNCC 6 cut(s) 1294, 1805, 2680, 3272, 3344, 3380
BmiI GGNNCC 6 cut(s) 587, 1595, 1827, 2288, 3273, 3345
BmrI ACTGGG 1 cut(s) 1611
BmuI ACTGGG 1 cut(s) 1611
BpiI GAAGAC 4 cut(s) 1383, 1415, 2883, 3441
BpmI CTGGAG 4 cut(s) 2705, 2991, 3312, 3489
Bpu10I CCTNAGC 2 cut(s) 1763, 3192
BpuEI CTTGAG 2 cut(s) 2555, 3404
BpuMI CCSGG 3 cut(s) 590, 3342, 3481
BsaAI YACGTR 1 cut(s) 2186
BsaBI GATNNNNATC 3 cut(s) 87, 1359, 1994
BsaJI CCNNGG 9 cut(s) 936, 1297, 1741, 1979, 2643, 2682, 3132, 3309, 3347
BsaWI WCCGGW 6 cut(s) 991, 1467, 1724, 2125, 2272, 3082
BsaXI ACNNNNNCTCC 4 cut(s) 544, 574, 1662, 1692
Bse118I RCCGGY 3 cut(s) 941, 1269, 1724
Bse1I ACTGG 6 cut(s) 1606, 2702, 2785, 3008, 3045, 3295
Bse21I CCTNAGG 1 cut(s) 1179
Bse3DI GCAATG 4 cut(s) 625, 1204, 2973, 3192
Bse8I GATNNNNATC 3 cut(s) 87, 1359, 1994
BseAI TCCGGA 2 cut(s) 991, 1467
BseBI CCWGG 7 cut(s) 860, 1980, 2684, 3072, 3310, 3348, 3468
BseDI CCNNGG 9 cut(s) 936, 1297, 1741, 1979, 2643, 2682, 3132, 3309, 3347
BseJI GATNNNNATC 3 cut(s) 87, 1359, 1994
BseMI GCAATG 4 cut(s) 625, 1204, 2973, 3192
BseNI ACTGG 6 cut(s) 1606, 2702, 2785, 3008, 3045, 3295
BseRI GAGGAG 7 cut(s) 65, 68, 481, 1197, 1400, 2831, 3486
BseSI GKGCMC 1 cut(s) 1976
BseYI CCCAGC 2 cut(s) 1213, 1929
Bsh1236I CGCG 2 cut(s) 790, 2589
Bsh1285I CGRYCG 3 cut(s) 1699, 2126, 2443
BshFI GGCC 9 cut(s) 941, 987, 1273, 1295, 1807, 2681, 3120, 3382, 3452
BshNI GGYRCC 2 cut(s) 1593, 1825
BshTI ACCGGT 1 cut(s) 1724
BsiEI CGRYCG 3 cut(s) 1699, 2126, 2443
BsiHKAI GWGCWC 4 cut(s) 1207, 1976, 3019, 3198
BslFI GGGAC 3 cut(s) 1414, 1886, 3357
BsmAI GTCTC 7 cut(s) 238, 265, 1025, 1076, 1102, 1695, 2418
BsmBI CGTCTC 2 cut(s) 238, 265
BsmFI GGGAC 3 cut(s) 1414, 1886, 3357
BsnI GGCC 9 cut(s) 941, 987, 1273, 1295, 1807, 2681, 3120, 3382, 3452
Bsp1286I GDGCHC 5 cut(s) 936, 1207, 1976, 3019, 3198
Bsp13I TCCGGA 2 cut(s) 991, 1467
Bsp19I CCATGG 1 cut(s) 3132
BspANI GGCC 9 cut(s) 941, 987, 1273, 1295, 1807, 2681, 3120, 3382, 3452
BspEI TCCGGA 2 cut(s) 991, 1467
BspFNI CGCG 2 cut(s) 790, 2589
BspHI TCATGA 2 cut(s) 1392, 1689
BspLI GGNNCC 6 cut(s) 587, 1595, 1827, 2288, 3273, 3345
BspMAI CTGCAG 1 cut(s) 3130
BspMI ACCTGC 1 cut(s) 2912
BspPI GGATC 4 cut(s) 1136, 1355, 1924, 2439
BspQI GCTCTTC 1 cut(s) 480
BspT107I GGYRCC 2 cut(s) 1593, 1825
BspTI CTTAAG 1 cut(s) 1946
BsrBI CCGCTC 4 cut(s) 103, 241, 490, 1695
BsrDI GCAATG 4 cut(s) 625, 1204, 2973, 3192
BsrFI RCCGGY 3 cut(s) 941, 1269, 1724
BsrI ACTGG 6 cut(s) 1606, 2702, 2785, 3008, 3045, 3295
BssAI RCCGGY 3 cut(s) 941, 1269, 1724
BssECI CCNNGG 9 cut(s) 936, 1297, 1741, 1979, 2643, 2682, 3132, 3309, 3347
BssNAI GTATAC 1 cut(s) 3338
BssT1I CCWWGG 4 cut(s) 936, 1297, 1741, 3132
Bst1107I GTATAC 1 cut(s) 3338
Bst2UI CCWGG 7 cut(s) 860, 1980, 2684, 3072, 3310, 3348, 3468
Bst4CI ACNGT 4 cut(s) 276, 1096, 2140, 3091
BstAFI CTTAAG 1 cut(s) 1946
BstAPI GCANNNNNTGC 2 cut(s) 2660, 3122
BstBAI YACGTR 1 cut(s) 2186
BstC8I GCNNGC 7 cut(s) 725, 2769, 2949, 3056, 3060, 3118, 3405
BstDSI CCRYGG 1 cut(s) 3132
BstEII GGTNACC 2 cut(s) 1265, 3250
BstENI CCTNNNNNAGG 2 cut(s) 2377, 3108
BstFNI CGCG 2 cut(s) 790, 2589
BstHHI GCGC 1 cut(s) 2560
BstMAI GTCTC 7 cut(s) 238, 265, 1025, 1076, 1102, 1695, 2418
BstMCI CGRYCG 3 cut(s) 1699, 2126, 2443
BstNI CCWGG 7 cut(s) 860, 1980, 2684, 3072, 3310, 3348, 3468
BstPI GGTNACC 2 cut(s) 1265, 3250
BstSFI CTRYAG 4 cut(s) 1122, 2205, 3126, 3327
BstSLI GKGCMC 1 cut(s) 1976
BstUI CGCG 2 cut(s) 790, 2589
BstV2I GAAGAC 4 cut(s) 1383, 1415, 2883, 3441
BstX2I RGATCY 2 cut(s) 716, 2934
BstYI RGATCY 2 cut(s) 716, 2934
BstZ17I GTATAC 1 cut(s) 3338
Bsu36I CCTNAGG 1 cut(s) 1179
BsuI GTATCC 1 cut(s) 1618
BsuRI GGCC 9 cut(s) 941, 987, 1273, 1295, 1807, 2681, 3120, 3382, 3452
BtgI CCRYGG 1 cut(s) 3132
BtgZI GCGATG 1 cut(s) 2570
BtsI GCAGTG 2 cut(s) 1224, 2017
BtsIMutI CAGTG 3 cut(s) 1224, 2017, 3015
BveI ACCTGC 1 cut(s) 2912
Cac8I GCNNGC 7 cut(s) 725, 2769, 2949, 3056, 3060, 3118, 3405
CaiI CAGNNNCTG 1 cut(s) 2708
CciI TCATGA 2 cut(s) 1392, 1689
CfoI GCGC 1 cut(s) 2560
Cfr10I RCCGGY 3 cut(s) 941, 1269, 1724
Cfr13I GGNCC 6 cut(s) 1294, 1805, 2680, 3272, 3344, 3380
CseI GACGC 2 cut(s) 119, 1888
Csp6I GTAC 3 cut(s) 1230, 1956, 3364
CspAI ACCGGT 1 cut(s) 1724
CspCI CAANNNNNGTGG 4 cut(s) 594, 629, 2485, 2520
CviQI GTAC 3 cut(s) 1230, 1956, 3364
DraI TTTAAA 1 cut(s) 2803
EaeI YGGCCR 1 cut(s) 1271
EciI GGCGGA 1 cut(s) 163
Eco130I CCWWGG 4 cut(s) 936, 1297, 1741, 3132
Eco24I GRGCYC 1 cut(s) 936
Eco32I GATATC 3 cut(s) 1498, 1864, 1996
Eco47I GGWCC 2 cut(s) 3272, 3344
Eco57I CTGAAG 2 cut(s) 198, 324
Eco81I CCTNAGG 1 cut(s) 1179
Eco91I GGTNACC 2 cut(s) 1265, 3250
EcoNI CCTNNNNNAGG 2 cut(s) 2377, 3108
EcoO109I RGGNCCY 4 cut(s) 1294, 2680, 3344, 3380
EcoO65I GGTNACC 2 cut(s) 1265, 3250
EcoRII CCWGG 7 cut(s) 858, 1978, 2682, 3070, 3308, 3346, 3466
EcoRV GATATC 3 cut(s) 1498, 1864, 1996
EcoT14I CCWWGG 4 cut(s) 936, 1297, 1741, 3132
EcoT38I GRGCYC 1 cut(s) 936
ErhI CCWWGG 4 cut(s) 936, 1297, 1741, 3132
Esp3I CGTCTC 2 cut(s) 238, 265
FalI AAGNNNNNCTT 6 cut(s) 635, 667, 3195, 3227, 3350, 3382
FaqI GGGAC 3 cut(s) 1414, 1886, 3357
FauI CCCGC 3 cut(s) 483, 516, 3047
FblI GTMKAC 2 cut(s) 1068, 3337
FriOI GRGCYC 1 cut(s) 936
FspBI CTAG 9 cut(s) 720, 803, 1503, 1833, 2397, 2511, 2519, 3105, 3384
GlaI GCGC 1 cut(s) 2559
GsaI CCCAGC 2 cut(s) 1217, 1933
GsuI CTGGAG 4 cut(s) 2705, 2991, 3312, 3489
HaeIII GGCC 9 cut(s) 941, 987, 1273, 1295, 1807, 2681, 3120, 3382, 3452
HgaI GACGC 2 cut(s) 119, 1888
HhaI GCGC 1 cut(s) 2560
Hin6I GCGC 1 cut(s) 2558
HinP1I GCGC 1 cut(s) 2558
HincII GTYRAC 2 cut(s) 1438, 1525
HindII GTYRAC 2 cut(s) 1438, 1525
HindIII AAGCTT 1 cut(s) 1637
HpaI GTTAAC 1 cut(s) 1525
Hpy99I CGWCG 1 cut(s) 135
HpyCH4III ACNGT 4 cut(s) 276, 1096, 2140, 3091
HpyCH4IV ACGT 4 cut(s) 312, 658, 2185, 3334
HpySE526I ACGT 4 cut(s) 312, 658, 2185, 3334
HspAI GCGC 1 cut(s) 2558
Kpn2I TCCGGA 2 cut(s) 991, 1467
KspAI GTTAAC 1 cut(s) 1525
LguI GCTCTTC 1 cut(s) 480
MaeI CTAG 9 cut(s) 720, 803, 1503, 1833, 2397, 2511, 2519, 3105, 3384
MaeII ACGT 4 cut(s) 312, 658, 2185, 3334
MaeIII GTNAC 8 cut(s) 647, 1265, 2038, 2399, 2629, 3022, 3085, 3250
MbiI CCGCTC 4 cut(s) 103, 241, 490, 1695
MfeI CAATTG 1 cut(s) 1809
MflI RGATCY 2 cut(s) 716, 2934
MhlI GDGCHC 5 cut(s) 936, 1207, 1976, 3019, 3198
MlyI GAGTC 5 cut(s) 82, 864, 949, 2046, 2882
MmeI TCCRAC 2 cut(s) 804, 3224
MroI TCCGGA 2 cut(s) 991, 1467
MroXI GAANNNNTTC 2 cut(s) 1475, 1873
MspA1I CMGCKG 1 cut(s) 1088
MspCI CTTAAG 1 cut(s) 1946
MunI CAATTG 1 cut(s) 1809
MvaI CCWGG 7 cut(s) 860, 1980, 2684, 3072, 3310, 3348, 3468
MvnI CGCG 2 cut(s) 790, 2589
NciI CCSGG 3 cut(s) 590, 3342, 3481
NcoI CCATGG 1 cut(s) 3132
NlaIV GGNNCC 6 cut(s) 587, 1595, 1827, 2288, 3273, 3345
NmuCI GTSAC 6 cut(s) 647, 1265, 2038, 2629, 3022, 3250
PagI TCATGA 2 cut(s) 1392, 1689
PaqCI CACCTGC 1 cut(s) 2912
PciSI GCTCTTC 1 cut(s) 480
PcsI WCGNNNNNNNCGW 1 cut(s) 82
PdmI GAANNNNTTC 2 cut(s) 1475, 1873
PflMI CCANNNNNTGG 1 cut(s) 3040
PfoI TCCNGGA 3 cut(s) 858, 3466, 3479
PinAI ACCGGT 1 cut(s) 1724
Ple19I CGATCG 1 cut(s) 2443
PleI GAGTC 5 cut(s) 81, 863, 949, 2045, 2882
PpsI GAGTC 5 cut(s) 81, 863, 949, 2045, 2882
Ppu21I YACGTR 1 cut(s) 2186
PpuMI RGGWCCY 1 cut(s) 3344
Psp5II RGGWCCY 1 cut(s) 3344
Psp6I CCWGG 7 cut(s) 858, 1978, 2682, 3070, 3308, 3346, 3466
PspEI GGTNACC 2 cut(s) 1265, 3250
PspFI CCCAGC 2 cut(s) 1213, 1929
PspGI CCWGG 7 cut(s) 858, 1978, 2682, 3070, 3308, 3346, 3466
PspN4I GGNNCC 6 cut(s) 587, 1595, 1827, 2288, 3273, 3345
PspPI GGNCC 6 cut(s) 1294, 1805, 2680, 3272, 3344, 3380
PspPPI RGGWCCY 1 cut(s) 3344
PstI CTGCAG 1 cut(s) 3130
PstNI CAGNNNCTG 1 cut(s) 2708
PsuI RGATCY 2 cut(s) 716, 2934
PvuI CGATCG 1 cut(s) 2443
PvuII CAGCTG 1 cut(s) 1088
RsaI GTAC 3 cut(s) 1231, 1957, 3365
RsaNI GTAC 3 cut(s) 1230, 1956, 3364
SapI GCTCTTC 1 cut(s) 480
Sau96I GGNCC 6 cut(s) 1294, 1805, 2680, 3272, 3344, 3380
SchI GAGTC 5 cut(s) 82, 864, 949, 2046, 2882
SduI GDGCHC 5 cut(s) 936, 1207, 1976, 3019, 3198
SfcI CTRYAG 4 cut(s) 1122, 2205, 3126, 3327
SinI GGWCC 2 cut(s) 3272, 3344
SmlI CTYRAG 3 cut(s) 1946, 2534, 3419
SmoI CTYRAG 3 cut(s) 1946, 2534, 3419
SspMI CTAG 9 cut(s) 720, 803, 1503, 1833, 2397, 2511, 2519, 3105, 3384
StyI CCWWGG 4 cut(s) 936, 1297, 1741, 3132
TaaI ACNGT 4 cut(s) 276, 1096, 2140, 3091
TaiI ACGT 4 cut(s) 315, 661, 2188, 3337
TaqI TCGA 6 cut(s) 133, 370, 756, 1485, 1699, 2122
TaqII GACCGA 1 cut(s) 2453
TatI WGTACW 1 cut(s) 3363
TauI GCSGC 1 cut(s) 2972
TscAI CASTG 3 cut(s) 1224, 2017, 3015
TseFI GTSAC 6 cut(s) 647, 1265, 2038, 2629, 3022, 3250
Tsp45I GTSAC 6 cut(s) 647, 1265, 2038, 2629, 3022, 3250
TspGWI ACGGA 3 cut(s) 262, 697, 3370
TspRI CASTG 3 cut(s) 1224, 2017, 3015
Van91I CCANNNNNTGG 1 cut(s) 3040
Vha464I CTTAAG 1 cut(s) 1946
VneI GTGCAC 1 cut(s) 1972
VpaK11BI GGWCC 2 cut(s) 3272, 3344
XagI CCTNNNNNAGG 2 cut(s) 2377, 3108
XapI RAATTY 3 cut(s) 1617, 2334, 2804
XbaI TCTAGA 1 cut(s) 2518
XcmI CCANNNNNNNNNTGG 2 cut(s) 1618, 3282
XmiI GTMKAC 2 cut(s) 1068, 3337
XmnI GAANNNNTTC 2 cut(s) 1475, 1873
XspI CTAG 9 cut(s) 720, 803, 1503, 1833, 2397, 2511, 2519, 3105, 3384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.