Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000906

Physical Location & Seq

Genomic Coordinates Reverse (-)

27368525 .. 27370256

Gene Structure 1732 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0249600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGCCTCTGTATGCCATGAATTGTTATTTATTGCCAAAATCGCTATGTGATGATATTCATCAACTATGTGCTTCTTTCTTTTGGGGGGACACTGATGACAAGAAGAAGATACATTGGAGAAGTTGGGAGAAATTATGCCTCACAAAGTTTGAGGGTGGCATGGGTTTTAAAAATATCTATGCTTATAACCTTGCTATGCTTGGTAAGCAAGGCTGGAGACTTATTACAAATCCTCATTCTTTGATTGCGCGACTGTATAAGGCCAAGTACTATCCCAACTGTTCTTTTTGGGAAGCTGAGTTAGGTGATTCTCCGTCATTTTCTTGGAGAAGCATTTTCAGTGGAAGGCCGGTCCTCAAGGCCGGGCTGCAATGGTGCATTGGGGATGGCACCCAAGTTAGCATTTGGAAAGACAAATGGATCCCCCACTGCCAACAATTTTTGATCCAGAAACCACAGGATTGTGTTTTTGAATTAGTTTCGGATTTGATTGATTCCCACACCAGACAATGGATCCCAGCTGCGGTGTATGCCTGTTTCTCACCTGACGTGGCTCAGAAGGTATTATGTATTCCTCTTAGTCGAAGAATTTTTTGTGACAAACCTTGTTGGAGTCCCGAAAAAAAAGGATTCTACTCTGTTAAAACTGCTTATTGGATTGCTAGAGCCAAAGTATTAGAACACGTTCTTACTTCTACATCTCAAGGTAATCCATATGCGGAGTTATGGAAGAGACTATGGAAGGCAAAAGTGCCTGGTAAGGTTCAGATCTGCATTTGGCGTGCTTGTTCCAATTTACTTCCTACAAAAGTTAAACTCAGTACCAAAGGGTATGAGGGTGATCTTCAGTGTATTCTGTGTCCACATGCATATGAAGTCATTTCCCACGTCCTTTGCAAATGCCCTACTGCAGCTGCAATCTTAACTGCCCCTCCCTTTAATTTGGGACGAAGCTTGGTACCCCATGTTGAGTTTAAGGACTGGTTATTGGATCATGCCTTGCATCTAAAGAAAGAAGTTTTTGCAAAGCTCCTGATGATGCTTTGGGCTTTGTGGAAGAACAGGAACAATATGTTGTGGAACAATACAACGCACCCTGCTGATGCCCTAGTACTTAGCACGCTTGCTTGGTTTGATGACTTCAGTAGGATTCATGGTGCTGACAAACCAACGCACCCAAAACAAAAGCAGTTTTGGAAACCGGCTGCCCCAGGAACATGGAAACTAAATGTCGACGGTAGTTTCCTTCCAAACATTGATCGTGGTGGTGCAGGGGGTGTTATGCGGAATGAAACAGGACAGTTTCATGCGGCTTTTGCAACTCCTGTCCCGTATGTAACTTCGGCAAAGCAGGTTGAGCTGTGTGCTATTAGAGAGGGTTTAAAATTGGTGACAGCAATGCAGATCAGCAATGTTGTCATTGAAACAGACTGCTTGGAGGCTGTCTCTAGTATTATGGACATCCATTTTACTCATGTCTACGACGAAGGCATCATTGATGACATCCGCTGGAGGCTGCAGCAACGACCTGATATTGTTATACAACATACTCTACGTGGGTGTAATCGAGTAGCTCATTGTTTGGCTAATTCAGCTTATGAGGCTAGTCATAGTTCCATTTGGCCTGTGCGACCGCCAGCCTTCATTCTGGAGGCATTACATTTTGATTGTAAACATTTGGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0010501 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

561

Amino Acids

63.94

Weight (kDa)

8.88

Isoelectric Point (pI)

36.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	233 - 306	2.4e-14	zinc-binding in reverse transcriptase
RVT_3	PF13456	410 - 532	1.6e-21	Reverse transcriptase-like
RNase_H	PF00075	411 - 489	1.8e-06	RNase H

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000906)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20920 AT1G20920 AT1G20920 AT1G20920 AT1G20920 AT1G20920 AT1G20920 AT3G09620 AT3G09620
fragaria_vesca	FvH4_3g27090 FvH4_4g11730 FvH4_5g26270 FvH4_5g26270 FvH4_5g26270 FvH4_5g26270 FvH4_5g26270
malus_domestica	MD06G1002800.v1.1 MD09G1086200.v1.1
prunus_persica	Prupe.5G003900_v2.0.a1 Prupe.5G003900_v2.0.a1 Prupe.5G003900_v2.0.a1 Prupe.5G003900_v2.0.a1 Prupe.5G003900_v2.0.a1 Prupe.5G003900_v2.0.a1 Prupe.5G003900_v2.0.a1 Prupe.5G003900_v2.0.a1
pyrus_communis	pycom06g00290 pycom09g01160
rosa_chinensis	RchiOBHm_Chr5g0049651 RchiOBHm_Chr7g0217001
rosa_laevigata	RLG00000002515 RLG00000034630
rosa_multiflora	Rmu_co8441089.1_g000001 Rmu_sc0001725.1_g000004 Rmu_sc0002114.1_g000002 Rmu_sc0013777.1_g000004 Rmu_sc0013777.1_g000005
rosa_roxburghii	Rroxscaffold_1G00032010 Rroxscaffold_3G00242640
rosa_rugosa	Rorug05G0249600 Rorug05G0249700 Rorug05G0249800 Rorug05G0249900 Rorug05G0250000 Rorug05G0250100 Rorug05G0250200 Rorug07G0164800 Rorug07G0164900 Rorug07G0165000 Rorug07G0165100 Rorug07G0165200 Rorug07G0165300 Rorug07G0165400.1 Rorug07G0165500.1 Rorug07G0165600
rosa_samantha	Rh5AG326000 Rh5BG337300 Rh5CG362000 Rh5DG349500 Rh7AG305000 Rh7BG296500 Rh7CG324100 Rh7DG305100
rosa_wichuraiana	Rw5G030810 Rw7G025910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	186
Acc36I	ACCTGC	1 cut(s)	1342
Acc65I	GGTACC	1 cut(s)	958
AccB1I	GGYRCC	2 cut(s)	389, 958
AccB7I	CCANNNNNTGG	1 cut(s)	510
AccI	GTMKAC	2 cut(s)	1233, 1479
AccII	CGCG	1 cut(s)	250
AciI	CCGC	6 cut(s)	524, 719, 1285, 1310, 1507, 1634
AclWI	GGATC	6 cut(s)	415, 428, 439, 508, 521, 999
AcsI	RAATTY	1 cut(s)	588
AcuI	CTGAAG	2 cut(s)	830, 1126
AfaI	GTAC	4 cut(s)	269, 823, 960, 1113
AfiI	CCNNNNNNNGG	2 cut(s)	510, 523
AflIII	ACRYGT	1 cut(s)	682
AgsI	TTSAA	2 cut(s)	473, 1424
AjiI	CACGTC	2 cut(s)	550, 889
AjnI	CCWGG	2 cut(s)	754, 1210
AluBI	AGCT	8 cut(s)	296, 521, 914, 954, 1030, 1360, 1574, 1595
AluI	AGCT	8 cut(s)	296, 521, 914, 954, 1030, 1360, 1574, 1595
Alw26I	GTCTC	3 cut(s)	211, 727, 1450
AlwI	GGATC	6 cut(s)	415, 428, 439, 508, 521, 999
AoxI	GGCC	4 cut(s)	261, 347, 360, 1622
ApeKI	GCWGC	7 cut(s)	367, 521, 911, 914, 1205, 1516, 1519
ApoI	RAATTY	1 cut(s)	588
Asp700I	GAANNNNTTC	1 cut(s)	684
Asp718I	GGTACC	1 cut(s)	958
AspLEI	GCGC	1 cut(s)	250
AspS9I	GGNCC	1 cut(s)	352
AsuC2I	CCSGG	1 cut(s)	364
AsuHPI	GGTGA	4 cut(s)	317, 534, 851, 1402
AvaII	GGWCC	1 cut(s)	352
BamHI	GGATCC	2 cut(s)	420, 513
BanI	GGYRCC	2 cut(s)	389, 958
BbvI	GCAGC	7 cut(s)	354, 508, 901, 923, 1192, 1503, 1531
BccI	CCATC	1 cut(s)	380
BciT130I	CCWGG	2 cut(s)	756, 1212
BcnI	CCSGG	1 cut(s)	364
BcoDI	GTCTC	3 cut(s)	211, 727, 1450
BfaI	CTAG	4 cut(s)	663, 1109, 1449, 1605
BfmI	CTRYAG	2 cut(s)	909, 1517
BfuAI	ACCTGC	1 cut(s)	1342
BglII	AGATCT	1 cut(s)	768
BisI	GCNGC	8 cut(s)	368, 522, 912, 915, 1206, 1311, 1517, 1520
BlsI	GCNGC	8 cut(s)	369, 523, 913, 916, 1207, 1312, 1518, 1521
BmcAI	AGTACT	2 cut(s)	269, 1113
Bme1390I	CCNGG	3 cut(s)	364, 756, 1212
Bme18I	GGWCC	1 cut(s)	352
BmgBI	CACGTC	2 cut(s)	550, 889
BmgT120I	GGNCC	1 cut(s)	352
BmiI	GGNNCC	4 cut(s)	391, 422, 515, 960
BmrFI	CCNGG	3 cut(s)	364, 756, 1212
BmsI	GCATC	4 cut(s)	1012, 1029, 1093, 1500
BplI	GAGNNNNNCTC	2 cut(s)	1430, 1462
BpmI	CTGGAG	3 cut(s)	235, 1531, 1670
BpuEI	CTTGAG	2 cut(s)	341, 687
BpuMI	CCSGG	1 cut(s)	364
BsaAI	YACGTR	1 cut(s)	1556
BsaBI	GATNNNNATC	1 cut(s)	57
BsaJI	CCNNGG	1 cut(s)	1210
BsaXI	ACNNNNNCTCC	2 cut(s)	916, 946
Bsc4I	CCNNNNNNNGG	2 cut(s)	510, 523
Bse118I	RCCGGY	2 cut(s)	349, 1201
Bse1I	ACTGG	1 cut(s)	986
Bse3DI	GCAATG	3 cut(s)	377, 1404, 1417
Bse8I	GATNNNNATC	1 cut(s)	57
BseBI	CCWGG	2 cut(s)	756, 1212
BseDI	CCNNGG	1 cut(s)	1210
BseGI	GGATG	3 cut(s)	391, 1461, 1503
BseJI	GATNNNNATC	1 cut(s)	57
BseLI	CCNNNNNNNGG	2 cut(s)	510, 523
BseMI	GCAATG	3 cut(s)	377, 1404, 1417
BseMII	CTCAG	3 cut(s)	288, 569, 832
BseNI	ACTGG	1 cut(s)	986
BseXI	GCAGC	7 cut(s)	354, 508, 901, 923, 1192, 1503, 1531
BseYI	CCCAGC	1 cut(s)	517
BsgI	GTGCAG	1 cut(s)	1290
Bsh1236I	CGCG	1 cut(s)	250
Bsh1285I	CGRYCG	1 cut(s)	1634
BshFI	GGCC	4 cut(s)	263, 349, 362, 1624
BshNI	GGYRCC	2 cut(s)	389, 958
BsiEI	CGRYCG	1 cut(s)	1634
BsiSI	CCGG	3 cut(s)	350, 363, 1202
BslFI	GGGAC	4 cut(s)	101, 600, 960, 1313
BslI	CCNNNNNNNGG	2 cut(s)	510, 523
BsmAI	GTCTC	3 cut(s)	211, 727, 1450
BsmFI	GGGAC	4 cut(s)	101, 600, 960, 1313
BsnI	GGCC	4 cut(s)	263, 349, 362, 1624
Bsp143I	GATC	8 cut(s)	420, 444, 513, 768, 841, 991, 1258, 1404
BspACI	CCGC	6 cut(s)	524, 719, 1285, 1310, 1507, 1634
BspANI	GGCC	4 cut(s)	263, 349, 362, 1624
BspCNI	CTCAG	3 cut(s)	289, 568, 831
BspFNI	CGCG	1 cut(s)	250
BspLI	GGNNCC	4 cut(s)	391, 422, 515, 960
BspMAI	CTGCAG	2 cut(s)	913, 1521
BspMI	ACCTGC	1 cut(s)	1342
BspPI	GGATC	6 cut(s)	415, 428, 439, 508, 521, 999
BspT107I	GGYRCC	2 cut(s)	389, 958
BsrDI	GCAATG	3 cut(s)	377, 1404, 1417
BsrFI	RCCGGY	2 cut(s)	349, 1201
BsrI	ACTGG	1 cut(s)	986
BssAI	RCCGGY	2 cut(s)	349, 1201
BssECI	CCNNGG	1 cut(s)	1210
BssMI	GATC	8 cut(s)	420, 444, 513, 768, 841, 991, 1258, 1404
Bst2UI	CCWGG	2 cut(s)	756, 1212
Bst4CI	ACNGT	4 cut(s)	255, 281, 1238, 1302
Bst6I	CTCTTC	1 cut(s)	725
BstBAI	YACGTR	1 cut(s)	1556
BstC8I	GCNNGC	4 cut(s)	783, 1121, 1125, 1638
BstDEI	CTNAG	5 cut(s)	297, 555, 578, 818, 1115
BstF5I	GGATG	3 cut(s)	391, 1461, 1503
BstFNI	CGCG	1 cut(s)	250
BstHHI	GCGC	1 cut(s)	250
BstKTI	GATC	8 cut(s)	423, 447, 516, 771, 844, 994, 1261, 1407
BstMAI	GTCTC	3 cut(s)	211, 727, 1450
BstMBI	GATC	8 cut(s)	420, 444, 513, 768, 841, 991, 1258, 1404
BstMCI	CGRYCG	1 cut(s)	1634
BstMWI	GCNNNNNNNGC	7 cut(s)	40, 205, 530, 1316, 1357, 1592, 1601
BstNI	CCWGG	2 cut(s)	756, 1212
BstNSI	RCATGY	1 cut(s)	869
BstSCI	CCNGG	3 cut(s)	362, 754, 1210
BstSFI	CTRYAG	2 cut(s)	909, 1517
BstUI	CGCG	1 cut(s)	250
BstV1I	GCAGC	7 cut(s)	354, 508, 901, 923, 1192, 1503, 1531
BstX2I	RGATCY	3 cut(s)	420, 513, 768
BstXI	CCANNNNNNTGG	1 cut(s)	1218
BstYI	RGATCY	3 cut(s)	420, 513, 768
BsuRI	GGCC	4 cut(s)	263, 349, 362, 1624
BtrI	CACGTC	2 cut(s)	550, 889
BtsCI	GGATG	3 cut(s)	391, 1461, 1503
BtsI	GCAGTG	1 cut(s)	427
BtsIMutI	CAGTG	4 cut(s)	90, 346, 427, 854
BveI	ACCTGC	1 cut(s)	1342
Cac8I	GCNNGC	4 cut(s)	783, 1121, 1125, 1638
CfoI	GCGC	1 cut(s)	250
Cfr10I	RCCGGY	2 cut(s)	349, 1201
Cfr13I	GGNCC	1 cut(s)	352
Csp6I	GTAC	4 cut(s)	268, 822, 959, 1112
CspCI	CAANNNNNGTGG	2 cut(s)	875, 910
CviAII	CATG	9 cut(s)	16, 160, 866, 965, 995, 1154, 1218, 1307, 1475
CviQI	GTAC	4 cut(s)	268, 822, 959, 1112
DdeI	CTNAG	5 cut(s)	297, 555, 578, 818, 1115
DpnI	GATC	8 cut(s)	422, 446, 515, 770, 843, 993, 1260, 1406
DpnII	GATC	8 cut(s)	420, 444, 513, 768, 841, 991, 1258, 1404
DraI	TTTAAA	2 cut(s)	169, 1383
Eam1104I	CTCTTC	1 cut(s)	725
EarI	CTCTTC	1 cut(s)	725
Eco47I	GGWCC	1 cut(s)	352
Eco57I	CTGAAG	2 cut(s)	830, 1126
EcoRII	CCWGG	2 cut(s)	754, 1210
EcoT22I	ATGCAT	1 cut(s)	871
FaeI	CATG	9 cut(s)	19, 163, 869, 968, 998, 1157, 1221, 1310, 1478
FaqI	GGGAC	4 cut(s)	101, 600, 960, 1313
FatI	CATG	9 cut(s)	15, 159, 865, 964, 994, 1153, 1217, 1306, 1474
FauNDI	CATATG	2 cut(s)	715, 871
FblI	GTMKAC	2 cut(s)	1233, 1479
Fnu4HI	GCNGC	8 cut(s)	368, 522, 912, 915, 1206, 1311, 1517, 1520
FokI	GGATG	3 cut(s)	398, 1448, 1490
Fsp4HI	GCNGC	8 cut(s)	368, 522, 912, 915, 1206, 1311, 1517, 1520
FspBI	CTAG	4 cut(s)	663, 1109, 1449, 1605
GlaI	GCGC	1 cut(s)	249
GluI	GCNGC	8 cut(s)	368, 522, 912, 915, 1206, 1311, 1517, 1520
GsaI	CCCAGC	1 cut(s)	521
GsuI	CTGGAG	3 cut(s)	235, 1531, 1670
HaeIII	GGCC	4 cut(s)	263, 349, 362, 1624
HapII	CCGG	3 cut(s)	350, 363, 1202
HhaI	GCGC	1 cut(s)	250
Hin1II	CATG	9 cut(s)	19, 163, 869, 968, 998, 1157, 1221, 1310, 1478
Hin6I	GCGC	1 cut(s)	248
HinP1I	GCGC	1 cut(s)	248
HincII	GTYRAC	1 cut(s)	1234
HindII	GTYRAC	1 cut(s)	1234
HindIII	AAGCTT	1 cut(s)	952
HinfI	GANTC	5 cut(s)	308, 494, 613, 630, 1150
HpaII	CCGG	3 cut(s)	350, 363, 1202
HphI	GGTGA	4 cut(s)	317, 534, 851, 1402
Hpy166II	GTNNAC	4 cut(s)	863, 1234, 1480, 1673
Hpy188I	TCNGA	3 cut(s)	484, 558, 768
Hpy188III	TCNNGA	4 cut(s)	448, 617, 1033, 1649
Hpy8I	GTNNAC	4 cut(s)	863, 1234, 1480, 1673
Hpy99I	CGWCG	2 cut(s)	1238, 1487
HpyAV	CCTTC	6 cut(s)	339, 553, 736, 1256, 1481, 1651
HpyCH4III	ACNGT	4 cut(s)	255, 281, 1238, 1302
HpyCH4IV	ACGT	4 cut(s)	549, 684, 888, 1555
HpyF10VI	GCNNNNNNNGC	7 cut(s)	40, 205, 530, 1316, 1357, 1592, 1601
HpyF3I	CTNAG	5 cut(s)	297, 555, 578, 818, 1115
HpySE526I	ACGT	4 cut(s)	549, 684, 888, 1555
Hsp92II	CATG	9 cut(s)	19, 163, 869, 968, 998, 1157, 1221, 1310, 1478
HspAI	GCGC	1 cut(s)	248
KpnI	GGTACC	1 cut(s)	962
Kzo9I	GATC	8 cut(s)	420, 444, 513, 768, 841, 991, 1258, 1404
LmnI	GCTCC	1 cut(s)	1035
Lsp1109I	GCAGC	7 cut(s)	354, 508, 901, 923, 1192, 1503, 1531
LweI	GCATC	4 cut(s)	1012, 1029, 1093, 1500
MaeI	CTAG	4 cut(s)	663, 1109, 1449, 1605
MaeII	ACGT	4 cut(s)	549, 684, 888, 1555
MaeIII	GTNAC	3 cut(s)	596, 1336, 1390
MalI	GATC	8 cut(s)	422, 446, 515, 770, 843, 993, 1260, 1406
MboI	GATC	8 cut(s)	420, 444, 513, 768, 841, 991, 1258, 1404
MboII	GAAGA	6 cut(s)	115, 118, 597, 742, 836, 1069
MflI	RGATCY	3 cut(s)	420, 513, 768
MluCI	AATT	9 cut(s)	19, 131, 437, 473, 588, 793, 940, 1385, 1588
MlyI	GAGTC	1 cut(s)	622
MmeI	TCCRAC	1 cut(s)	590
Mph1103I	ATGCAT	1 cut(s)	871
MroXI	GAANNNNTTC	1 cut(s)	684
MseI	TTAA	7 cut(s)	168, 642, 813, 923, 939, 975, 1382
MslI	CAYNNNNRTG	1 cut(s)	870
MspA1I	CMGCKG	3 cut(s)	521, 914, 1509
MspI	CCGG	3 cut(s)	350, 363, 1202
MspR9I	CCNGG	3 cut(s)	364, 756, 1212
MvaI	CCWGG	2 cut(s)	756, 1212
MvnI	CGCG	1 cut(s)	250
MwoI	GCNNNNNNNGC	7 cut(s)	40, 205, 530, 1316, 1357, 1592, 1601
NciI	CCSGG	1 cut(s)	364
NdeI	CATATG	2 cut(s)	715, 871
NdeII	GATC	8 cut(s)	420, 444, 513, 768, 841, 991, 1258, 1404
NlaIII	CATG	9 cut(s)	19, 163, 869, 968, 998, 1157, 1221, 1310, 1478
NlaIV	GGNNCC	4 cut(s)	391, 422, 515, 960
NmuCI	GTSAC	2 cut(s)	596, 1390
NsiI	ATGCAT	1 cut(s)	871
NspI	RCATGY	1 cut(s)	869
PdmI	GAANNNNTTC	1 cut(s)	684
PfeI	GAWTC	4 cut(s)	308, 494, 630, 1150
PflMI	CCANNNNNTGG	1 cut(s)	510
PkrI	GCNGC	8 cut(s)	369, 523, 913, 916, 1207, 1312, 1518, 1521
PleI	GAGTC	1 cut(s)	621
PpsI	GAGTC	1 cut(s)	621
Ppu21I	YACGTR	1 cut(s)	1556
PsiI	TTATAA	1 cut(s)	186
Psp6I	CCWGG	2 cut(s)	754, 1210
PspFI	CCCAGC	1 cut(s)	517
PspGI	CCWGG	2 cut(s)	754, 1210
PspN4I	GGNNCC	4 cut(s)	391, 422, 515, 960
PspPI	GGNCC	1 cut(s)	352
PstI	CTGCAG	2 cut(s)	913, 1521
PsuI	RGATCY	3 cut(s)	420, 513, 768
PvuII	CAGCTG	2 cut(s)	521, 914
RsaI	GTAC	4 cut(s)	269, 823, 960, 1113
RsaNI	GTAC	4 cut(s)	268, 822, 959, 1112
RseI	CAYNNNNRTG	1 cut(s)	870
SalI	GTCGAC	1 cut(s)	1232
SaqAI	TTAA	7 cut(s)	168, 642, 813, 923, 939, 975, 1382
SatI	GCNGC	8 cut(s)	368, 522, 912, 915, 1206, 1311, 1517, 1520
Sau3AI	GATC	8 cut(s)	420, 444, 513, 768, 841, 991, 1258, 1404
Sau96I	GGNCC	1 cut(s)	352
ScaI	AGTACT	2 cut(s)	269, 1113
SchI	GAGTC	1 cut(s)	622
ScrFI	CCNGG	3 cut(s)	364, 756, 1212
SfaNI	GCATC	4 cut(s)	1012, 1029, 1093, 1500
SfcI	CTRYAG	2 cut(s)	909, 1517
SinI	GGWCC	1 cut(s)	352
SmiMI	CAYNNNNRTG	1 cut(s)	870
SmlI	CTYRAG	2 cut(s)	356, 702
SmoI	CTYRAG	2 cut(s)	356, 702
Sse9I	AATT	9 cut(s)	19, 131, 437, 473, 588, 793, 940, 1385, 1588
SsiI	CCGC	6 cut(s)	524, 719, 1285, 1310, 1507, 1634
SspMI	CTAG	4 cut(s)	663, 1109, 1449, 1605
StyD4I	CCNGG	3 cut(s)	362, 754, 1210
TaaI	ACNGT	4 cut(s)	255, 281, 1238, 1302
TaiI	ACGT	4 cut(s)	552, 687, 891, 1558
TaqI	TCGA	3 cut(s)	583, 1233, 1567
TasI	AATT	9 cut(s)	19, 131, 437, 473, 588, 793, 940, 1385, 1588
TatI	WGTACW	2 cut(s)	267, 1111
TauI	GCSGC	1 cut(s)	1313
TfiI	GAWTC	4 cut(s)	308, 494, 630, 1150
Tru1I	TTAA	7 cut(s)	168, 642, 813, 923, 939, 975, 1382
Tru9I	TTAA	7 cut(s)	168, 642, 813, 923, 939, 975, 1382
TscAI	CASTG	4 cut(s)	97, 346, 434, 854
TseFI	GTSAC	2 cut(s)	596, 1390
TseI	GCWGC	7 cut(s)	367, 521, 911, 914, 1205, 1516, 1519
Tsp45I	GTSAC	2 cut(s)	596, 1390
TspDTI	ATGAA	7 cut(s)	32, 47, 888, 1142, 1295, 1305, 1633
TspGWI	ACGGA	1 cut(s)	303
TspRI	CASTG	4 cut(s)	97, 346, 434, 854
Van91I	CCANNNNNTGG	1 cut(s)	510
VpaK11BI	GGWCC	1 cut(s)	352
XapI	RAATTY	1 cut(s)	588
XceI	RCATGY	1 cut(s)	869
XmiI	GTMKAC	2 cut(s)	1233, 1479
XmnI	GAANNNNTTC	1 cut(s)	684
XspI	CTAG	4 cut(s)	663, 1109, 1449, 1605
ZrmI	AGTACT	2 cut(s)	269, 1113
Zsp2I	ATGCAT	1 cut(s)	871

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.