Prupe.5G003900_v2.0.a1

DEAD-box ATP-dependent RNA helicase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
511356 .. 518476
7121 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G003900.7

Sequence Viewer

Length: 3480 bp
ATGGAAGAGGGCAAGCATAAATCCAGGAAGGAGGGGGAATCCAAGAGGAGTCATCGAGATCGGCAACGTGAAAAACAGAGGAATGGAGAGAGACACAGGGATAAAGATAAAGATAAGAGAGATCGTGATAGTCGGCGCTCTGAGAGAGAAAAGAGTTCTGATTCTGAGGATAGGTATGATAGAGAGAAGCATCGAGACAGGGACACTGATAGGACACGAAGCCGGGATGATGAAAGAGAGAGAACGAGAGACAGGAAGAGAGAAAAAGATAAAGAGAAGGAGAAGGAGAGAGAGAGGGCTAGAGAGAAGGAAAAGGAGAGGGAGAGGGAAAGAGAAAGAGAAAGAGAAAGAGAAAAAGAAAGAGATAGAGAGAAAGAAAGAGAAAAAGAAAAAGAAAAGGAACGAGAAAGAGAGAGGGAGAGAAGGGAACGAGAAAGAGAGGGAGAAGATAGAGAGAGGGAAAAGAGGGAGCGAGAGAGGGAGAGGGAAAAGGACAGAGATCGAGAGAGGAGGATACGGGAGAGGGAGAGGCGTAGGGACATTGATACTGATGATACTGATGATGATGTTAGGGAGCGTGGTAGGAAGCGGCATAGGAAAGATGAAAATGAGTACAAGGAGAAAGAGAGGGAAAGGAGTAGCAGCAGGTCAAACAGACATAGGGATGATGGAGATGGGAGCCCGAGAAAGAAGAGTGATGAAGATGATTCAGTTAAGAAAGAGAAGCAGCCAACTCGTGAGGAGGAGTTAGAGGATGAACAGCGGAAATTGGATGAGGAAATGGAAAAGCGGAGAAGGAGAGTTCAGGAGTGGCAAGAGTTAAAAAGGAAGAAGGAAGAATCTGAGAGAGAGAAACGTGGGGAAGGGGATGTTGATGAACCTAAGTCCGGCAAGGCCTGGACTCTTGAAGGAGAATCTGATGATGAAGAAGTACCCTCATTAGGGAAATCAGAGAGGGATATGGATGTTGATGGAGAAGACAATCTTACTGACAGAGAAGCTGGCGGAGATGCTATGGTGGTAGATTCTGAGAATGAAACAGATGCACTTACTTTGCAGAATGGGGCTGATGATGCTGTTGGTGATGAAGAAGTTGATCCATTAGATGCTTTTATGAATTCTATGGTGTTGCCTGAAGTTGAGAAGCTGAACAATGCTGTGGAACCATCAATTGTTGATGAGAAGAACAAGGATAAAAAGGATGATCTAAGTAATGGTGAACAGCCAAGGAGAGGTTCAAATAAATCTATGGGCAGAATAATTCCTGGGGAGGATTCTGACTCGGATTATGGGGACCTTGAGAATGATGATGACCCCTTAGAAGATGAAGGTGATGATGAGTTCATAAAAAGGGTGAAAAAGACAAAAGCTGAGAAGCTCTCTGTAGTTGATCACTCTAAGATAGATTATGATCCATTCCGCAAAAATTTCTATATTGAGGTGAAGGAGATCTCTAGAATGACTCCAGAACAGGTGGGTGCATATCGGAAAGAATTGGAATTGAAAATACATGGTAAGGATGTGCCAAAGCCGATCAAGACATGGCACCAAACTGGGCTTACAAGTAAAATCTTGGAAACAATAAAGAAGCTAAACTATGAAAAGCCAATGCCAATTCAGGCTCAGGCAGTGCCTGTAATTATGAGTGGTCGAGATTGTATTGGCATCGCAAAAACTGGGTCAGGCAAAACTGTTGCATTCGTGCTGCCAATGCTGAGGCATATCAAGGACCAGCCACCTGTGGTAGCAGGAGATGGACCTATTGGGCTTATAATGGCACCAACTAGGGAGCTTGTTCAGCAGATTCACAGTGATATTAAAAAGTTTACCAAGGTACTGGGTCTCAGGTGTGTGCCTGTGTATGGAGGTTCTGGTGTTGCCCAACAAATTAGTGAATTGAAGAGGGGAGCTGAAATTGTTGTCTGTACACCCGGTAGGATGATTGACATACTTTGTACAAGTGGAGGGAGAATAACAAATCTGCGTAGAGTAACGTATTTGGTAGTGGATGAAGCTGATCGAATGTTTGACATGGGTTTTGAACCTCAAATCACTCGAATTGTTCAAAATATTCGGCCAGATCGTCAAACTGTATTGTTTTCTGCCACCTTCCCTCGCCAGGTTGAAGTCTTGGCACGCAAAGTCTTGAACAAACCTGTGGAAATACAAGTTGGTGGTAGGAGTGTTGTGAATAAGGACATAGCACAATTGGTTGAAGTGAGGCTGGAAAATGAAAGGTTCTTGAGATTGTTAGAGTTACTTGGGGAGTGGTATGAGAAAGGAAAAATTTTGATATTTGTCGAGTCACAGAATAAATGTGATGCTTTATTTAGGGATCTGCTTAGGCATGGATATCCTTGTCTCTCACTTCACGGGGGCAAAGATCAAACAGATCGTGAGTCCACCATAACTGATTTTAAAAGCAATGTTTGTAATTTGTTGATTGCAACTAGTGTTGCTGCGAGAGGGTTAGATGTCAAGGAGCTTGAACTGGTGATCAACTTTGATAGTCCAAATCACTATGAAGACTATGTTCACCGTGTTGGCCGTACTGGGCGAGCTGGTCGGAAAGGCTGTGCTATAACGTTTGTCTCTGAGGAAGATGCTAGATATGCTCCAGATCTTGTCAAAGCATTGGAACTCTCTGAGCAAGTTGTTCCAGATGACCTGAAATCTCTTGCGGATAGTTTCACTGCAAAAGTAAATCAGGGACTCGAGCAAGCCCATGGAACTGGTTACGGAGGAAGTGGTTTTAAATTTAATGAAGAGGAAGATGAAGTGAGGAGAGCAGCAAAGAAAGCACAAGCCAAAGAATATGGTTTTGAGGATGACAAGTCAGATTCAGAAGATGAAGATGAAGGTATCCGAAAGGCAGGGGGTGACATTTCACAGCAGGCTGCCCTTGCTCAGATAGCAGCCATTGCTGCCGCCTCTAAAGGCAGTACAGCTTCAATTCAGACCCCTGTGCCTGCTGCCCAACTGCTTCCCAACAGTGGACTGCCTGTTTCTCTTCCAGGTGTCCTTGGTCTAACATTACCAGGAACAGCAGCAGCTGTGGCTGGGACTGGTTTGCCTGTTGTTGGCAATGATGGGGCAGCTCGGGCTGCAGCAATTGCAGCTGCGATGAACTTGCAGCATAATCTGGCAAAGATCCAAGCTGATGCAATGCCTGAACACTATGAAGCAGAGTTGGAGATAAATGATTTTCCACAGAATGCTCGATGGAAGGTTACCCACAAGGAAACTTTGGGACCTATATCAGAGTGGACTGGAGCTGCCATTACTACGAGGGGTCAGTATTTCCCACCAGGGAAGGTTGCAGGACCAGGAGATCGCAAACTCTACTTGTTTATTGAGGGCCCTACTGAACAGTCTGTCAAGAGAGCCAAAGCAGAATTAAAACGTGTTTTGGAAGATATCTCAAATCAGGCATTATCACTTCCTGGTGGAGCACAGCAAGGCAGATATCAAGTTCTATAA

Protein Analysis

1160

Amino Acids

132.39

Weight (kDa)

5.65

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1772
Acc36I ACCTGC 1 cut(s) 636
AccB1I GGYRCC 2 cut(s) 1545, 1777
AciI CCGC 7 cut(s) 589, 763, 790, 1005, 1420, 2681, 2928
AclI AACGTT 1 cut(s) 2585
AclWI GGATC 4 cut(s) 1091, 1406, 2343, 3145
AcoI YGGCCR 2 cut(s) 2075, 2545
AcsI RAATTY 4 cut(s) 1117, 1426, 2286, 2756
AcuI CTGAAG 1 cut(s) 1155
AfaI GTAC 7 cut(s) 614, 933, 1836, 1927, 1957, 2551, 2944
AfiI CCNNNNNNNGG 8 cut(s) 887, 941, 942, 1232, 1862, 2119, 2993, 3080
AflIII ACRYGT 1 cut(s) 3403
AhlI ACTAGT 1 cut(s) 2450
AjnI CCWGG 9 cut(s) 23, 896, 1264, 2118, 3013, 3037, 3307, 3325, 3442
AjuI GAANNNNNNNTTGG 4 cut(s) 1219, 1251, 2154, 2186
Alw21I GWGCWC 1 cut(s) 3454
Alw26I GTCTC 6 cut(s) 85, 189, 243, 1847, 2366, 2596
AlwI GGATC 4 cut(s) 1091, 1406, 2343, 3145
AlwNI CAGNNNCTG 2 cut(s) 1634, 3053
Ama87I CYCGRG 3 cut(s) 682, 2714, 3099
AoxI GGCC 4 cut(s) 894, 2075, 2545, 3358
ApaI GGGCCC 1 cut(s) 3362
ApoI RAATTY 4 cut(s) 1117, 1426, 2286, 2756
ArsI GACNNNNNNTTYG 4 cut(s) 1664, 1696, 2021, 2053
AspLEI GCGC 1 cut(s) 138
AspS9I GGNCC 7 cut(s) 1294, 1729, 1757, 3251, 3323, 3358, 3359
AsuC2I CCSGG 2 cut(s) 224, 1932
AsuHPI GGTGA 8 cut(s) 1094, 1229, 1343, 1366, 1453, 2506, 2528, 2891
AvaI CYCGRG 3 cut(s) 682, 2714, 3099
AvaII GGWCC 5 cut(s) 1294, 1729, 1757, 3251, 3323
BaeGI GKGCMC 1 cut(s) 3362
BanI GGYRCC 2 cut(s) 1545, 1777
BanII GRGCYC 2 cut(s) 683, 3362
BauI CACGAG 1 cut(s) 735
BbsI GAAGAC 2 cut(s) 984, 2532
Bbv12I GWGCWC 1 cut(s) 3454
BbvCI CCTCAGC 1 cut(s) 1715
BccI CCATC 7 cut(s) 662, 668, 965, 1174, 1748, 3083, 3216
BceAI ACGGC 1 cut(s) 2532
BcgI CGANNNNNNTGC 4 cut(s) 716, 750, 3112, 3146
BciT130I CCWGG 9 cut(s) 25, 898, 1266, 2120, 3015, 3039, 3309, 3327, 3444
BciVI GTATCC 2 cut(s) 507, 2873
BclI TGATCA 2 cut(s) 1390, 2496
BcnI CCSGG 2 cut(s) 224, 1932
BcoDI GTCTC 6 cut(s) 85, 189, 243, 1847, 2366, 2596
BcuI ACTAGT 1 cut(s) 2450
BfaI CTAG 5 cut(s) 300, 1455, 1785, 2451, 2607
BfmI CTRYAG 2 cut(s) 1383, 3105
BfoI RGCGCY 1 cut(s) 139
BfuAI ACCTGC 1 cut(s) 636
BfuI GTATCC 2 cut(s) 507, 2873
BglII AGATCT 2 cut(s) 1449, 2620
Bme18I GGWCC 5 cut(s) 1294, 1729, 1757, 3251, 3323
BmeT110I CYCGRG 3 cut(s) 682, 2714, 3099
BmgT120I GGNCC 7 cut(s) 1294, 1729, 1757, 3251, 3323, 3358, 3359
BmiI GGNNCC 7 cut(s) 680, 1164, 1295, 1547, 1779, 3252, 3360
BmrI ACTGGG 4 cut(s) 1563, 1686, 1847, 2562
BmsI GCATC 9 cut(s) 199, 1000, 1033, 1063, 1096, 1674, 2311, 2593, 3151
BmuI ACTGGG 4 cut(s) 1563, 1686, 1847, 2562
BpiI GAAGAC 2 cut(s) 984, 2532
BplI GAGNNNNNCTC 2 cut(s) 1364, 1396
BpmI CTGGAG 3 cut(s) 1449, 2601, 3291
Bpu10I CCTNAGC 3 cut(s) 1623, 1715, 2342
BpuEI CTTGAG 2 cut(s) 1319, 2263
BpuMI CCSGG 2 cut(s) 224, 1932
BsaBI GATNNNNATC 1 cut(s) 1410
BsaI GGTCTC 1 cut(s) 1847
BsaJI CCNNGG 6 cut(s) 1226, 1265, 1830, 2725, 3022, 3308
Bsc4I CCNNNNNNNGG 8 cut(s) 887, 941, 942, 1232, 1862, 2119, 2993, 3080
Bse1I ACTGG 8 cut(s) 1558, 1681, 1842, 2496, 2557, 2737, 3070, 3274
Bse3DI GCAATG 4 cut(s) 2431, 2919, 3091, 3171
Bse8I GATNNNNATC 1 cut(s) 1410
BseBI CCWGG 9 cut(s) 25, 898, 1266, 2120, 3015, 3039, 3309, 3327, 3444
BseDI CCNNGG 6 cut(s) 1226, 1265, 1830, 2725, 3022, 3308
BseJI GATNNNNATC 1 cut(s) 1410
BseLI CCNNNNNNNGG 8 cut(s) 887, 941, 942, 1232, 1862, 2119, 2993, 3080
BseMI GCAATG 4 cut(s) 2431, 2919, 3091, 3171
BseNI ACTGG 8 cut(s) 1558, 1681, 1842, 2496, 2557, 2737, 3070, 3274
BseRI GAGGAG 5 cut(s) 61, 523, 755, 758, 2797
BseSI GKGCMC 1 cut(s) 3362
BseYI CCCAGC 1 cut(s) 3059
BshFI GGCC 4 cut(s) 896, 2077, 2547, 3360
BshNI GGYRCC 2 cut(s) 1545, 1777
BsiHKAI GWGCWC 1 cut(s) 3454
BsiHKCI CYCGRG 3 cut(s) 682, 2714, 3099
BsiSI CCGG 3 cut(s) 223, 888, 1932
BslFI GGGAC 6 cut(s) 215, 551, 1307, 2724, 3076, 3264
BslI CCNNNNNNNGG 8 cut(s) 887, 941, 942, 1232, 1862, 2119, 2993, 3080
BsmAI GTCTC 6 cut(s) 85, 189, 243, 1847, 2366, 2596
BsmFI GGGAC 6 cut(s) 215, 551, 1307, 2724, 3076, 3264
BsmI GAATGC 2 cut(s) 1697, 3220
BsnI GGCC 4 cut(s) 896, 2077, 2547, 3360
Bso31I GGTCTC 1 cut(s) 1847
BsoBI CYCGRG 3 cut(s) 682, 2714, 3099
Bsp120I GGGCCC 1 cut(s) 3358
Bsp1286I GDGCHC 3 cut(s) 683, 3362, 3454
Bsp1407I TGTACA 2 cut(s) 1925, 1955
Bsp19I CCATGG 1 cut(s) 2725
BspACI CCGC 7 cut(s) 589, 763, 790, 1005, 1420, 2681, 2928
BspANI GGCC 4 cut(s) 896, 2077, 2547, 3360
BspLI GGNNCC 7 cut(s) 680, 1164, 1295, 1547, 1779, 3252, 3360
BspMAI CTGCAG 1 cut(s) 3109
BspMI ACCTGC 1 cut(s) 636
BspPI GGATC 4 cut(s) 1091, 1406, 2343, 3145
BspT107I GGYRCC 2 cut(s) 1545, 1777
BspTNI GGTCTC 1 cut(s) 1847
BsrDI GCAATG 4 cut(s) 2431, 2919, 3091, 3171
BsrGI TGTACA 2 cut(s) 1925, 1955
BsrI ACTGG 8 cut(s) 1558, 1681, 1842, 2496, 2557, 2737, 3070, 3274
BssECI CCNNGG 6 cut(s) 1226, 1265, 1830, 2725, 3022, 3308
BssSI CACGAG 1 cut(s) 735
BssT1I CCWWGG 4 cut(s) 1226, 1830, 2725, 3022
Bst2BI CACGAG 1 cut(s) 735
Bst2UI CCWGG 9 cut(s) 25, 898, 1266, 2120, 3015, 3039, 3309, 3327, 3444
Bst4CI ACNGT 6 cut(s) 1693, 1811, 2092, 2540, 2993, 3372
Bst6I CTCTTC 5 cut(s) 251, 686, 1895, 2760, 3015
BstAPI GCANNNNNTGC 2 cut(s) 2921, 3113
BstAUI TGTACA 2 cut(s) 1925, 1955
BstC8I GCNNGC 7 cut(s) 14, 1003, 2137, 2559, 2721, 2895, 2970
BstDSI CCRYGG 1 cut(s) 2725
BstEII GGTNACC 1 cut(s) 3229
BstH2I RGCGCY 1 cut(s) 139
BstHHI GCGC 1 cut(s) 138
BstMAI GTCTC 6 cut(s) 85, 189, 243, 1847, 2366, 2596
BstNI CCWGG 9 cut(s) 25, 898, 1266, 2120, 3015, 3039, 3309, 3327, 3444
BstPI GGTNACC 1 cut(s) 3229
BstSFI CTRYAG 2 cut(s) 1383, 3105
BstSLI GKGCMC 1 cut(s) 3362
BstV2I GAAGAC 2 cut(s) 984, 2532
BstX2I RGATCY 4 cut(s) 1449, 2335, 2620, 3150
BstXI CCANNNNNNTGG 2 cut(s) 1837, 2732
BstYI RGATCY 4 cut(s) 1449, 2335, 2620, 3150
BsuI GTATCC 2 cut(s) 507, 2873
BsuRI GGCC 4 cut(s) 896, 2077, 2547, 3360
BtgI CCRYGG 1 cut(s) 2725
BtgZI GCGATG 2 cut(s) 1651, 3137
BtsI GCAGTG 2 cut(s) 1635, 2691
BtsIMutI CAGTG 5 cut(s) 204, 1635, 1816, 2691, 2998
BveI ACCTGC 1 cut(s) 636
Cac8I GCNNGC 7 cut(s) 14, 1003, 2137, 2559, 2721, 2895, 2970
CaiI CAGNNNCTG 2 cut(s) 1634, 3053
CfoI GCGC 1 cut(s) 138
Cfr13I GGNCC 7 cut(s) 1294, 1729, 1757, 3251, 3323, 3358, 3359
Csp6I GTAC 7 cut(s) 613, 932, 1835, 1926, 1956, 2550, 2943
CviAII CATG 5 cut(s) 1511, 1542, 2032, 2348, 2726
CviQI GTAC 7 cut(s) 613, 932, 1835, 1926, 1956, 2550, 2943
DraI TTTAAA 2 cut(s) 2419, 2755
EaeI YGGCCR 2 cut(s) 2075, 2545
Eam1104I CTCTTC 5 cut(s) 251, 686, 1895, 2760, 3015
EarI CTCTTC 5 cut(s) 251, 686, 1895, 2760, 3015
EciI GGCGGA 1 cut(s) 1020
Eco130I CCWWGG 4 cut(s) 1226, 1830, 2725, 3022
Eco147I AGGCCT 1 cut(s) 896
Eco24I GRGCYC 2 cut(s) 683, 3362
Eco31I GGTCTC 1 cut(s) 1847
Eco32I GATATC 3 cut(s) 2354, 3418, 3467
Eco47I GGWCC 5 cut(s) 1294, 1729, 1757, 3251, 3323
Eco57I CTGAAG 1 cut(s) 1155
Eco88I CYCGRG 3 cut(s) 682, 2714, 3099
Eco91I GGTNACC 1 cut(s) 3229
EcoO109I RGGNCCY 4 cut(s) 1294, 3251, 3358, 3359
EcoO65I GGTNACC 1 cut(s) 3229
EcoRI GAATTC 1 cut(s) 1117
EcoRII CCWGG 9 cut(s) 23, 896, 1264, 2118, 3013, 3037, 3307, 3325, 3442
EcoRV GATATC 3 cut(s) 2354, 3418, 3467
EcoT14I CCWWGG 4 cut(s) 1226, 1830, 2725, 3022
EcoT38I GRGCYC 2 cut(s) 683, 3362
ErhI CCWWGG 4 cut(s) 1226, 1830, 2725, 3022
FaeI CATG 5 cut(s) 1514, 1545, 2035, 2351, 2729
FalI AAGNNNNNCTT 2 cut(s) 969, 1001
FaqI GGGAC 6 cut(s) 215, 551, 1307, 2724, 3076, 3264
FatI CATG 5 cut(s) 1510, 1541, 2031, 2347, 2725
FbaI TGATCA 2 cut(s) 1390, 2496
FriOI GRGCYC 2 cut(s) 683, 3362
FspBI CTAG 5 cut(s) 300, 1455, 1785, 2451, 2607
GlaI GCGC 1 cut(s) 137
GsaI CCCAGC 1 cut(s) 3063
GsuI CTGGAG 3 cut(s) 1449, 2601, 3291
HaeII RGCGCY 1 cut(s) 139
HaeIII GGCC 4 cut(s) 896, 2077, 2547, 3360
HapII CCGG 3 cut(s) 223, 888, 1932
HhaI GCGC 1 cut(s) 138
Hin1II CATG 5 cut(s) 1514, 1545, 2035, 2351, 2729
Hin6I GCGC 1 cut(s) 136
HinP1I GCGC 1 cut(s) 136
HpaII CCGG 3 cut(s) 223, 888, 1932
HphI GGTGA 8 cut(s) 1094, 1229, 1343, 1366, 1453, 2506, 2528, 2891
Hpy166II GTNNAC 7 cut(s) 1220, 1827, 1928, 2403, 2536, 2996, 3267
Hpy8I GTNNAC 7 cut(s) 1220, 1827, 1928, 2403, 2536, 2996, 3267
HpyCH4III ACNGT 6 cut(s) 1693, 1811, 2092, 2540, 2993, 3372
HpyCH4IV ACGT 5 cut(s) 67, 856, 1994, 2585, 3403
HpySE526I ACGT 5 cut(s) 67, 856, 1994, 2585, 3403
Hsp92II CATG 5 cut(s) 1514, 1545, 2035, 2351, 2729
HspAI GCGC 1 cut(s) 136
Ksp22I TGATCA 2 cut(s) 1390, 2496
LmnI GCTCC 9 cut(s) 469, 574, 678, 1789, 1907, 2482, 2620, 3272, 3449
LweI GCATC 9 cut(s) 199, 1000, 1033, 1063, 1096, 1674, 2311, 2593, 3151
MaeI CTAG 5 cut(s) 300, 1455, 1785, 2451, 2607
MaeII ACGT 5 cut(s) 67, 856, 1994, 2585, 3403
MaeIII GTNAC 6 cut(s) 1990, 2256, 2304, 2735, 2879, 3229
MfeI CAATTG 3 cut(s) 1170, 2207, 3111
MflI RGATCY 4 cut(s) 1449, 2335, 2620, 3150
MhlI GDGCHC 3 cut(s) 683, 3362, 3454
MlyI GAGTC 7 cut(s) 58, 895, 1274, 1456, 2312, 2408, 2706
MmeI TCCRAC 2 cut(s) 2546, 3171
MseI TTAA 7 cut(s) 714, 821, 1818, 2418, 2754, 2760, 3398
MslI CAYNNNNRTG 1 cut(s) 663
MspA1I CMGCKG 3 cut(s) 763, 3053, 3119
MspI CCGG 3 cut(s) 223, 888, 1932
MunI CAATTG 3 cut(s) 1170, 2207, 3111
Mva1269I GAATGC 2 cut(s) 1697, 3220
MvaI CCWGG 9 cut(s) 25, 898, 1266, 2120, 3015, 3039, 3309, 3327, 3444
NciI CCSGG 2 cut(s) 224, 1932
NcoI CCATGG 1 cut(s) 2725
NlaIII CATG 5 cut(s) 1514, 1545, 2035, 2351, 2729
NlaIV GGNNCC 7 cut(s) 680, 1164, 1295, 1547, 1779, 3252, 3360
NmuCI GTSAC 2 cut(s) 2304, 2879
PaeR7I CTCGAG 1 cut(s) 2714
PceI AGGCCT 1 cut(s) 896
PcsI WCGNNNNNNNCGW 1 cut(s) 2080
PctI GAATGC 2 cut(s) 1697, 3220
PfeI GAWTC 9 cut(s) 38, 161, 707, 839, 914, 1025, 1274, 1804, 2840
PfoI TCCNGGA 1 cut(s) 23
PleI GAGTC 7 cut(s) 57, 895, 1274, 1456, 2311, 2407, 2706
PpsI GAGTC 7 cut(s) 57, 895, 1274, 1456, 2311, 2407, 2706
PpuMI RGGWCCY 2 cut(s) 1294, 3251
PsiI TTATAA 1 cut(s) 1772
Psp1406I AACGTT 1 cut(s) 2585
Psp5II RGGWCCY 2 cut(s) 1294, 3251
Psp6I CCWGG 9 cut(s) 23, 896, 1264, 2118, 3013, 3037, 3307, 3325, 3442
PspEI GGTNACC 1 cut(s) 3229
PspFI CCCAGC 1 cut(s) 3059
PspGI CCWGG 9 cut(s) 23, 896, 1264, 2118, 3013, 3037, 3307, 3325, 3442
PspN4I GGNNCC 7 cut(s) 680, 1164, 1295, 1547, 1779, 3252, 3360
PspOMI GGGCCC 1 cut(s) 3358
PspPI GGNCC 7 cut(s) 1294, 1729, 1757, 3251, 3323, 3358, 3359
PspPPI RGGWCCY 2 cut(s) 1294, 3251
PspXI VCTCGAGB 1 cut(s) 2714
PstI CTGCAG 1 cut(s) 3109
PstNI CAGNNNCTG 2 cut(s) 1634, 3053
PsuI RGATCY 4 cut(s) 1449, 2335, 2620, 3150
PvuII CAGCTG 2 cut(s) 3053, 3119
RsaI GTAC 7 cut(s) 614, 933, 1836, 1927, 1957, 2551, 2944
RsaNI GTAC 7 cut(s) 613, 932, 1835, 1926, 1956, 2550, 2943
RseI CAYNNNNRTG 1 cut(s) 663
SaqAI TTAA 7 cut(s) 714, 821, 1818, 2418, 2754, 2760, 3398
Sau96I GGNCC 7 cut(s) 1294, 1729, 1757, 3251, 3323, 3358, 3359
SchI GAGTC 7 cut(s) 58, 895, 1274, 1456, 2312, 2408, 2706
SduI GDGCHC 3 cut(s) 683, 3362, 3454
SfaNI GCATC 9 cut(s) 199, 1000, 1033, 1063, 1096, 1674, 2311, 2593, 3151
SfcI CTRYAG 2 cut(s) 1383, 3105
Sfr274I CTCGAG 1 cut(s) 2714
SinI GGWCC 5 cut(s) 1294, 1729, 1757, 3251, 3323
SlaI CTCGAG 1 cut(s) 2714
SmiMI CAYNNNNRTG 1 cut(s) 663
SmlI CTYRAG 3 cut(s) 1298, 2242, 2714
SmoI CTYRAG 3 cut(s) 1298, 2242, 2714
SpeI ACTAGT 1 cut(s) 2450
SseBI AGGCCT 1 cut(s) 896
SsiI CCGC 7 cut(s) 589, 763, 790, 1005, 1420, 2681, 2928
SspI AATATT 1 cut(s) 2071
SspMI CTAG 5 cut(s) 300, 1455, 1785, 2451, 2607
StuI AGGCCT 1 cut(s) 896
StyI CCWWGG 4 cut(s) 1226, 1830, 2725, 3022
TaaI ACNGT 6 cut(s) 1693, 1811, 2092, 2540, 2993, 3372
TaiI ACGT 5 cut(s) 70, 859, 1997, 2588, 3406
TaqI TCGA 9 cut(s) 55, 193, 502, 1651, 2020, 2056, 2301, 2715, 3220
TatI WGTACW 4 cut(s) 612, 1925, 1955, 2942
TauI GCSGC 2 cut(s) 592, 2930
TfiI GAWTC 9 cut(s) 38, 161, 707, 839, 914, 1025, 1274, 1804, 2840
Tru1I TTAA 7 cut(s) 714, 821, 1818, 2418, 2754, 2760, 3398
Tru9I TTAA 7 cut(s) 714, 821, 1818, 2418, 2754, 2760, 3398
TscAI CASTG 5 cut(s) 211, 1635, 1816, 2698, 2998
TseFI GTSAC 2 cut(s) 2304, 2879
Tsp45I GTSAC 2 cut(s) 2304, 2879
TspGWI ACGGA 1 cut(s) 2754
TspRI CASTG 5 cut(s) 211, 1635, 1816, 2698, 2998
VpaK11BI GGWCC 5 cut(s) 1294, 1729, 1757, 3251, 3323
XapI RAATTY 4 cut(s) 1117, 1426, 2286, 2756
XbaI TCTAGA 1 cut(s) 1454
XhoI CTCGAG 1 cut(s) 2714
XspI CTAG 5 cut(s) 300, 1455, 1785, 2451, 2607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.