pycom06g00290

DEAD-box ATP-dependent RNA helicase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
266608 .. 270153
3546 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g00290.1

Sequence Viewer

Length: 3546 bp
ATGGCACAGAAGGGAGCAATGGAAGAGGTCAAACATAAACCTAGGAAGGAGGGGGAATCCAAGAGGAGTCATCGAGATCGGGATCGTGAAAAGGAGAGAAATGGAGAGAGGCACAGGGATAAAGATAAAGATAAGAGAGACCGTGATAGTCGGCGCTATGAGAGAGAAAAGAGTTCTGATTCTGAGGAGAGGTATGATAGGGAGAAGCATGGAGACAGGGATAGTGATAGGAAGCGCAACCGAGATGATGAAAGAGAGAGAACAAGAGACAAAAAGAGGGATAAAGATAAGGAGAGGGACAAAGACAAAGAAAAGGAGAAGAGAGATAGGACTAGAGAGAAGGAAAAGGAAAGGGAAAAAGAAAGGCAAAGAGAAAAAGAAAGAGAAAGGGAAAAAGAACGACAAAGAGAAAAGGAGAGAGAAAAAGAGAAAGAACATGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAAAGAAAAAGAACGAGAAAGAGAGAGGGAGAGAAGGGAACGAGAAAGAGAGGTAGAAGATAAGAGGGAGCGAGAGAGGGAGAGGGAAAAAGATAGAGATCGGGAGCGGAGGGTGCGGGAGAGGGAGAGGCGCAGGGACATTGATGCTGATGATATTGATGATGATGGTAGGGAGCGTGATAGGAAGCGACCTAGGAAAGATAACAATGACTACAAGGAGAGAGAGAGGGAAAGGAGTAGCAGCAGGTCAAACAGACATAGGGATGATGGAGATGGGAGCCCCAGAAAGAAGTCTGATGAAGGTGATTCCTCTAAGGAAGAACAACCAACCCGTGAGGAGGAGCTGGAGGATGAACAACGGAAATTGGATGATGAAATGGAAAAGCGGAGAAGGAGAGTTCAGGAGTGGCAAGAGTTAAAAAGAAAGAAGGAAGAAACTGAGAGAGAGAAGAATGGGGAAGGGGATGCTGATGAACCTAAGTCAGGAAAGGCCTGGACTCTTGAAGAAGAATCTGATGATGAAGAAGTACCTTCCTTAGAGAAATCAGAGACAGGGATAGATGTTGATGAAGAAGACGATACTGACAGAAAAGTTGGAGATGCTGTGGCGGTAGTTTCTGAAGATGAAACAGCTGCACCCGCTTTGCACAATGGGGCTGATGATGCTGCTGATGATGAGGAAGTTGATCCTTTAGATGCTTTTATGAATTCTATGGTATTGCCTGAAGTTGAGAAGCTGACCAATGCAGTTGAACCGTCAATTGTTGATGAAAAGAACAAGGATAAGAAGGATGGTCGAAACAATGGTGAACAACCAAGGAGAGGTTCAAATAAATCTATGGGCAGAATAATTCCTGGGGAGGATTCTGACTCAGATTATGGGGACTTGGAGAATGATGATGATCCAGTAGAAGATGAAGGTGATGATGAGTTCATAAAAAGGGTGAAAAAGACAAAAGCTGAGAAGCTTGCTGTAGTTGATCACTCAAAGATAGATTATGATCCATTTCGTAAAAATTTCTATATTGAAGTGAAGGAGATCTCAAGAATGACCCCAGAAGAGGTGGGGGTGTATCGGAAACAATTGGAATTGAAGATCCATGGTAAAGATGTGCCCAAGCCCATCAAGACCTGGCACCAAACTGGACTTACAAGTAAAATCTTGGAAACAATAAAAAAGCTTAACTATGAAAAGCCAATGCCAATTCAGGCTCAGGCAGTGCCTATAATTATGAGTGGTCGAGACTGCATTGGCATTGCAAAGACTGGGTCAGGCAAAACCCTTGCATTTGTGCTGCCAATGCTGAGGCATATCAAGGACCAGCCACCTGTGGTAGCTGGAGATGGGCCTATTGGGCTTATAATGGCACCAACGAGGGAGCTTGTTCAGCAAATTCACAGTGATATTAAAAAGTTTACAAAGGTACTTGGTCTCAGGTGTGTGCCTGTATACGGAGGTTCTGGTGTTGCCCAACAGATTAGTGAATTGAAGCGGGGGGCCGAAATTGTCGTCTGTACCCCTGGTAGGATGATTGACATACTGTGCACAAGTGGGGGGAAAATAACAAATCTGCGTAGAGTTACTTATTTGGTTGTGGATGAAGCTGATCGAATGTTTGACATGGGCTTTGAACCACAGATCACCCGAATTGTACAAAATATCCGGCCTGATCGTCAAACTGTTTTGTTTTCTGCCACCTTCCCTCGCCAGGTTGAAGTCTTGGCACGCAAAGTCTTAAACAGACCTGTGGAAATACAAGTTGGTGGAAGGAGTGTTGTGAATAAGGACATAACACAATTAGTTGAAGTGAGGATGGAAAATGAAAGGTTCTTGAGATTGTTAGAGTTGCTTGGGGAATGGTATGAGAAAGGAAAAATTTTGATATTTGTTGAGTCGCAGAACAAATGCGATGCGTTGTTCAGGGATCTGCTTAGGCATGGGTATCCTTGTCTCTCACTTCATGGGGGCAAAGATCAGACAGATCGTGAGTCCACGATAACTGACTTTAAGAGCAATGTTTGTAATTTGTTGGTTGCAACAAGTGTTGCTGCCAGAGGGTTAGATGTGAAGGAGCTTGAACTGGTAATCAATTATGATAGCCCGAATCACTATGAAGACTATGTTCACCGTGTTGGCCGAACAGGGCGAGCTGGCCGGAAAGGTTGTGCTATAACTTTTATCTCTGGGGAAGATGCTAGATATGCTCCGGATCTTGTCAAAGCGTTGGAACTCTCTGAGCAAGTTGTTCCAGATGACCTAAAGTCTCTTGCTGATAATTTCACGGCAAAAGTAAATCAGGGACTTGAGCAAGCTCATGGGACTGGTTATGGGGGAAGTGGTTTCAAATTTAATGAAGAGGAAGATGAAGTGAGGAGAGCAGCAAAGAAAGCACAGGCCAAGGAATATGGTTTTGAGGAGGACAAGTCAGATTCAGAAGATGAAGATGATGGTATTCGAAAGGCAGGGGGCGACATCTCACAGCAGGCTGCCCTTGCTCAGATAGCTGCCATTGCTGCTGCCTCCAAAGCTAGTACAGCTTCAATGCAGACCCCTGCCTCTGCTGCCCAACTACTTCCAAGCAGTGGACTGCCTGTTTCTCTTCCAGGTGTCCTTGGTCTAGCGTTGCCAGGAACAGCAGCAGTTGCGGCTGGGACTGGTCTGCCTCTTGTGGGCAATGATGGGGCTGCTCGGGCAGCAGCAATTGCAGCTGCAATGAACTTGCAGCATAACTTGGCAAAGATTCAAGCTGATGCAATGCCTGAACACTATGAAGCAGAATTGGAGATAAATGATTTTCCCCAGAATGCTCGATGGAAGGTTACCCACAAGGAAACTTTGGGCCCTATATCAGAGTGGACTGGGGCTGCCATTACTACCAGGGGTCAGTATTTCCCACCAGGCAAGGTTACAGGACCAGGAGATCGCAAGCTCTACCTGTTTATCGAGGGCCCTACTGAACAATCTGTCAAGAGAGCTAAGACAGAATTAAAACGTGTTTTGGAAGATATCTCAAATCAGGCATTATCGCTTCCTGGTGGAGCTCAGCAAGGCAGATATCAAGTTTTATAA

Protein Analysis

1182

Amino Acids

135.16

Weight (kDa)

5.65

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 560 - 731 6.5e-50 DEAD/DEAH box helicase
Helicase_C PF00271 771 - 877 1.3e-29 Helicase conserved C-terminal domain
KH_12 PF23469 1083 - 1160 2.7e-14 KH-domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1838, 3544
Acc36I ACCTGC 1 cut(s) 711
AccB1I GGYRCC 2 cut(s) 1611, 1843
AccB7I CCANNNNNTGG 1 cut(s) 3059
AccBSI CCGCTC 1 cut(s) 583
AccI GTMKAC 1 cut(s) 1926
AccIII TCCGGA 1 cut(s) 2683
AciI CCGC 7 cut(s) 583, 592, 862, 1085, 1116, 1969, 3122
AclWI GGATC 7 cut(s) 90, 1157, 1373, 1472, 1567, 2409, 2694
AcoI YGGCCR 2 cut(s) 2611, 2629
AcsI RAATTY 5 cut(s) 1183, 1492, 1869, 2352, 2822
AcuI CTGAAG 2 cut(s) 1116, 1221
AfaI GTAC 5 cut(s) 1005, 1902, 1993, 2130, 3010
AfiI CCNNNNNNNGG 9 cut(s) 814, 959, 1298, 1537, 1928, 2001, 2185, 3059, 3146
AflIII ACRYGT 1 cut(s) 3469
AhdI GACNNNNNGTC 1 cut(s) 2737
AjuI GAANNNNNNNTTGG 4 cut(s) 1285, 1317, 2220, 2252
Alw21I GWGCWC 2 cut(s) 2024, 3520
Alw26I GTCTC 8 cut(s) 132, 207, 261, 1019, 1713, 1913, 2432, 2745
Alw44I GTGCAC 1 cut(s) 2020
AlwI GGATC 7 cut(s) 90, 1157, 1373, 1472, 1567, 2409, 2694
Ama87I CYCGRG 1 cut(s) 3165
Aor13HI TCCGGA 1 cut(s) 2683
AoxI GGCC 9 cut(s) 966, 1823, 1974, 2141, 2611, 2629, 2871, 3316, 3424
ApaI GGGCCC 2 cut(s) 3320, 3428
ApaLI GTGCAC 1 cut(s) 2020
ApoI RAATTY 5 cut(s) 1183, 1492, 1869, 2352, 2822
ArsI GACNNNNNNTTYG 6 cut(s) 1730, 1762, 1971, 2003, 2087, 2119
AspA2I CCTAGG 2 cut(s) 41, 668
AspLEI GCGC 3 cut(s) 156, 237, 609
AspS9I GGNCC 8 cut(s) 1795, 1823, 1974, 3316, 3317, 3389, 3424, 3425
AsuHPI GGTGA 6 cut(s) 791, 1295, 1409, 1432, 2110, 2594
AsuII TTCGAA 1 cut(s) 2932
AvaI CYCGRG 1 cut(s) 3165
AvaII GGWCC 2 cut(s) 1795, 3389
AvrII CCTAGG 2 cut(s) 41, 668
BaeGI GKGCMC 4 cut(s) 1593, 2024, 3320, 3428
BanI GGYRCC 2 cut(s) 1611, 1843
BanII GRGCYC 4 cut(s) 758, 3320, 3428, 3520
BbsI GAAGAC 2 cut(s) 1056, 2598
Bbv12I GWGCWC 2 cut(s) 2024, 3520
BbvCI CCTCAGC 1 cut(s) 1781
BceAI ACGGC 1 cut(s) 2775
BciVI GTATCC 1 cut(s) 2430
BclI TGATCA 1 cut(s) 1456
BcoDI GTCTC 8 cut(s) 132, 207, 261, 1019, 1713, 1913, 2432, 2745
BfaI CTAG 6 cut(s) 42, 333, 669, 2673, 3006, 3095
BfmI CTRYAG 1 cut(s) 1449
BfoI RGCGCY 1 cut(s) 157
BfuAI ACCTGC 1 cut(s) 711
BfuI GTATCC 1 cut(s) 2430
BglI GCCNNNNNGGC 1 cut(s) 1831
BglII AGATCT 1 cut(s) 1515
BlnI CCTAGG 2 cut(s) 41, 668
BlpI GCTNAGC 1 cut(s) 3519
Bme18I GGWCC 2 cut(s) 1795, 3389
BmeRI GACNNNNNGTC 1 cut(s) 2737
BmeT110I CYCGRG 1 cut(s) 3165
BmgT120I GGNCC 8 cut(s) 1795, 1823, 1974, 3316, 3317, 3389, 3424, 3425
BmiI GGNNCC 6 cut(s) 755, 1613, 1845, 1975, 3318, 3426
BmrI ACTGGG 2 cut(s) 1752, 3345
BmsI GCATC 8 cut(s) 610, 931, 1066, 1129, 1162, 2377, 2659, 3217
BmuI ACTGGG 2 cut(s) 1752, 3345
BpiI GAAGAC 2 cut(s) 1056, 2598
BpmI CTGGAG 2 cut(s) 842, 1836
Bpu10I CCTNAGC 3 cut(s) 1689, 1781, 2408
Bpu1102I GCTNAGC 1 cut(s) 3519
Bpu14I TTCGAA 1 cut(s) 2932
BpuEI CTTGAG 3 cut(s) 1504, 2329, 2801
BsaBI GATNNNNATC 4 cut(s) 81, 573, 1377, 1476
BsaI GGTCTC 2 cut(s) 132, 1913
BsaJI CCNNGG 9 cut(s) 41, 668, 1292, 1331, 1576, 1996, 2874, 3088, 3354
BsaWI WCCGGW 1 cut(s) 2683
BsaXI ACNNNNNCTCC 4 cut(s) 1065, 1095, 2885, 2915
Bsc4I CCNNNNNNNGG 9 cut(s) 814, 959, 1298, 1537, 1928, 2001, 2185, 3059, 3146
Bse1I ACTGG 7 cut(s) 1382, 1624, 1747, 2562, 2803, 3136, 3340
Bse3DI GCAATG 7 cut(s) 24, 1731, 2497, 2985, 3157, 3195, 3237
Bse8I GATNNNNATC 4 cut(s) 81, 573, 1377, 1476
BseAI TCCGGA 1 cut(s) 2683
BseDI CCNNGG 9 cut(s) 41, 668, 1292, 1331, 1576, 1996, 2874, 3088, 3354
BseGI GGATG 8 cut(s) 745, 832, 850, 946, 1273, 2010, 2080, 2295
BseJI GATNNNNATC 4 cut(s) 81, 573, 1377, 1476
BseLI CCNNNNNNNGG 9 cut(s) 814, 959, 1298, 1537, 1928, 2001, 2185, 3059, 3146
BseMI GCAATG 7 cut(s) 24, 1731, 2497, 2985, 3157, 3195, 3237
BseNI ACTGG 7 cut(s) 1382, 1624, 1747, 2562, 2803, 3136, 3340
BseRI GAGGAG 6 cut(s) 79, 200, 827, 830, 2863, 2906
BseSI GKGCMC 4 cut(s) 1593, 2024, 3320, 3428
BseYI CCCAGC 1 cut(s) 3125
BsgI GTGCAG 1 cut(s) 1095
BshFI GGCC 9 cut(s) 968, 1825, 1976, 2143, 2613, 2631, 2873, 3318, 3426
BshNI GGYRCC 2 cut(s) 1611, 1843
BsiHKAI GWGCWC 2 cut(s) 2024, 3520
BsiHKCI CYCGRG 1 cut(s) 3165
BsiSI CCGG 3 cut(s) 2140, 2632, 2684
BslFI GGGAC 6 cut(s) 311, 626, 1373, 2790, 2809, 3142
BslI CCNNNNNNNGG 9 cut(s) 814, 959, 1298, 1537, 1928, 2001, 2185, 3059, 3146
BsmAI GTCTC 8 cut(s) 132, 207, 261, 1019, 1713, 1913, 2432, 2745
BsmFI GGGAC 6 cut(s) 311, 626, 1373, 2790, 2809, 3142
BsmI GAATGC 1 cut(s) 3286
BsnI GGCC 9 cut(s) 968, 1825, 1976, 2143, 2613, 2631, 2873, 3318, 3426
Bso31I GGTCTC 2 cut(s) 132, 1913
BsoBI CYCGRG 1 cut(s) 3165
Bsp119I TTCGAA 1 cut(s) 2932
Bsp120I GGGCCC 2 cut(s) 3316, 3424
Bsp1286I GDGCHC 6 cut(s) 758, 1593, 2024, 3320, 3428, 3520
Bsp13I TCCGGA 1 cut(s) 2683
Bsp1407I TGTACA 1 cut(s) 2128
Bsp1720I GCTNAGC 1 cut(s) 3519
Bsp19I CCATGG 1 cut(s) 1576
BspACI CCGC 7 cut(s) 583, 592, 862, 1085, 1116, 1969, 3122
BspANI GGCC 9 cut(s) 968, 1825, 1976, 2143, 2613, 2631, 2873, 3318, 3426
BspEI TCCGGA 1 cut(s) 2683
BspLI GGNNCC 6 cut(s) 755, 1613, 1845, 1975, 3318, 3426
BspMI ACCTGC 1 cut(s) 711
BspPI GGATC 7 cut(s) 90, 1157, 1373, 1472, 1567, 2409, 2694
BspT104I TTCGAA 1 cut(s) 2932
BspT107I GGYRCC 2 cut(s) 1611, 1843
BspTNI GGTCTC 2 cut(s) 132, 1913
BsrBI CCGCTC 1 cut(s) 583
BsrDI GCAATG 7 cut(s) 24, 1731, 2497, 2985, 3157, 3195, 3237
BsrGI TGTACA 1 cut(s) 2128
BsrI ACTGG 7 cut(s) 1382, 1624, 1747, 2562, 2803, 3136, 3340
BssECI CCNNGG 9 cut(s) 41, 668, 1292, 1331, 1576, 1996, 2874, 3088, 3354
BssNAI GTATAC 1 cut(s) 1927
BssT1I CCWWGG 6 cut(s) 41, 668, 1292, 1576, 2874, 3088
Bst1107I GTATAC 1 cut(s) 1927
Bst4CI ACNGT 6 cut(s) 143, 1233, 1877, 2019, 2158, 2606
Bst6I CTCTTC 5 cut(s) 18, 314, 1530, 2826, 3081
BstAPI GCANNNNNTGC 2 cut(s) 3119, 3179
BstAUI TGTACA 1 cut(s) 2128
BstBI TTCGAA 1 cut(s) 2932
BstC8I GCNNGC 7 cut(s) 1446, 2203, 2625, 2629, 2787, 2961, 3404
BstDSI CCRYGG 1 cut(s) 1576
BstEII GGTNACC 1 cut(s) 3295
BstENI CCTNNNNNAGG 1 cut(s) 957
BstF5I GGATG 8 cut(s) 745, 832, 850, 946, 1273, 2010, 2080, 2295
BstH2I RGCGCY 1 cut(s) 157
BstHHI GCGC 3 cut(s) 156, 237, 609
BstMAI GTCTC 8 cut(s) 132, 207, 261, 1019, 1713, 1913, 2432, 2745
BstPI GGTNACC 1 cut(s) 3295
BstSFI CTRYAG 1 cut(s) 1449
BstSLI GKGCMC 4 cut(s) 1593, 2024, 3320, 3428
BstV2I GAAGAC 2 cut(s) 1056, 2598
BstX2I RGATCY 4 cut(s) 1515, 1572, 2401, 2686
BstYI RGATCY 4 cut(s) 1515, 1572, 2401, 2686
BstZ17I GTATAC 1 cut(s) 1927
BsuI GTATCC 1 cut(s) 2430
BsuRI GGCC 9 cut(s) 968, 1825, 1976, 2143, 2613, 2631, 2873, 3318, 3426
BtgI CCRYGG 1 cut(s) 1576
BtgZI GCGATG 1 cut(s) 2400
BtsCI GGATG 8 cut(s) 745, 832, 850, 946, 1273, 2010, 2080, 2295
BtsI GCAGTG 2 cut(s) 1701, 3064
BtsIMutI CAGTG 3 cut(s) 1701, 1882, 3064
BveI ACCTGC 1 cut(s) 711
Cac8I GCNNGC 7 cut(s) 1446, 2203, 2625, 2629, 2787, 2961, 3404
CfoI GCGC 3 cut(s) 156, 237, 609
Cfr13I GGNCC 8 cut(s) 1795, 1823, 1974, 3316, 3317, 3389, 3424, 3425
Csp6I GTAC 5 cut(s) 1004, 1901, 1992, 2129, 3009
CviAII CATG 7 cut(s) 209, 437, 1577, 2098, 2414, 2438, 2792
CviQI GTAC 5 cut(s) 1004, 1901, 1992, 2129, 3009
DriI GACNNNNNGTC 1 cut(s) 2737
EaeI YGGCCR 2 cut(s) 2611, 2629
Eam1104I CTCTTC 5 cut(s) 18, 314, 1530, 2826, 3081
Eam1105I GACNNNNNGTC 1 cut(s) 2737
EarI CTCTTC 5 cut(s) 18, 314, 1530, 2826, 3081
Ecl136II GAGCTC 1 cut(s) 3518
Eco130I CCWWGG 6 cut(s) 41, 668, 1292, 1576, 2874, 3088
Eco147I AGGCCT 1 cut(s) 968
Eco24I GRGCYC 4 cut(s) 758, 3320, 3428, 3520
Eco31I GGTCTC 2 cut(s) 132, 1913
Eco32I GATATC 2 cut(s) 3484, 3533
Eco47I GGWCC 2 cut(s) 1795, 3389
Eco53kI GAGCTC 1 cut(s) 3518
Eco57I CTGAAG 2 cut(s) 1116, 1221
Eco88I CYCGRG 1 cut(s) 3165
Eco91I GGTNACC 1 cut(s) 3295
EcoICRI GAGCTC 1 cut(s) 3518
EcoNI CCTNNNNNAGG 1 cut(s) 957
EcoO109I RGGNCCY 3 cut(s) 3317, 3424, 3425
EcoO65I GGTNACC 1 cut(s) 3295
EcoRI GAATTC 1 cut(s) 1183
EcoRV GATATC 2 cut(s) 3484, 3533
EcoT14I CCWWGG 6 cut(s) 41, 668, 1292, 1576, 2874, 3088
EcoT38I GRGCYC 4 cut(s) 758, 3320, 3428, 3520
ErhI CCWWGG 6 cut(s) 41, 668, 1292, 1576, 2874, 3088
FaeI CATG 7 cut(s) 212, 440, 1580, 2101, 2417, 2441, 2795
FaqI GGGAC 6 cut(s) 311, 626, 1373, 2790, 2809, 3142
FatI CATG 7 cut(s) 208, 436, 1576, 2097, 2413, 2437, 2791
FauI CCCGC 3 cut(s) 585, 1123, 1962
FbaI TGATCA 1 cut(s) 1456
FblI GTMKAC 1 cut(s) 1926
FokI GGATG 8 cut(s) 752, 839, 857, 953, 1280, 2017, 2087, 2302
FriOI GRGCYC 4 cut(s) 758, 3320, 3428, 3520
FspBI CTAG 6 cut(s) 42, 333, 669, 2673, 3006, 3095
GlaI GCGC 3 cut(s) 155, 236, 608
GsaI CCCAGC 1 cut(s) 3129
GsuI CTGGAG 2 cut(s) 842, 1836
HaeII RGCGCY 1 cut(s) 157
HaeIII GGCC 9 cut(s) 968, 1825, 1976, 2143, 2613, 2631, 2873, 3318, 3426
HapII CCGG 3 cut(s) 2140, 2632, 2684
HhaI GCGC 3 cut(s) 156, 237, 609
Hin1II CATG 7 cut(s) 212, 440, 1580, 2101, 2417, 2441, 2795
Hin6I GCGC 3 cut(s) 154, 235, 607
HinP1I GCGC 3 cut(s) 154, 235, 607
HindIII AAGCTT 2 cut(s) 1442, 1655
HpaII CCGG 3 cut(s) 2140, 2632, 2684
HphI GGTGA 6 cut(s) 791, 1295, 1409, 1432, 2110, 2594
Hpy166II GTNNAC 8 cut(s) 1286, 1893, 1927, 2022, 2469, 2602, 3062, 3333
Hpy8I GTNNAC 8 cut(s) 1286, 1893, 1927, 2022, 2469, 2602, 3062, 3333
HpyCH4III ACNGT 6 cut(s) 143, 1233, 1877, 2019, 2158, 2606
HpyCH4IV ACGT 1 cut(s) 3469
HpySE526I ACGT 1 cut(s) 3469
Hsp92II CATG 7 cut(s) 212, 440, 1580, 2101, 2417, 2441, 2795
HspAI GCGC 3 cut(s) 154, 235, 607
Kpn2I TCCGGA 1 cut(s) 2683
Ksp22I TGATCA 1 cut(s) 1456
LweI GCATC 8 cut(s) 610, 931, 1066, 1129, 1162, 2377, 2659, 3217
MaeI CTAG 6 cut(s) 42, 333, 669, 2673, 3006, 3095
MaeII ACGT 1 cut(s) 3469
MaeIII GTNAC 3 cut(s) 2056, 3295, 3382
MbiI CCGCTC 1 cut(s) 583
MfeI CAATTG 3 cut(s) 1236, 1559, 3177
MflI RGATCY 4 cut(s) 1515, 1572, 2401, 2686
MhlI GDGCHC 6 cut(s) 758, 1593, 2024, 3320, 3428, 3520
MlyI GAGTC 5 cut(s) 76, 967, 1340, 2378, 2474
MmeI TCCRAC 2 cut(s) 1051, 2682
MroI TCCGGA 1 cut(s) 2683
MseI TTAA 7 cut(s) 893, 1659, 1884, 2213, 2484, 2826, 3464
MslI CAYNNNNRTG 1 cut(s) 738
MspA1I CMGCKG 2 cut(s) 1109, 3185
MspI CCGG 3 cut(s) 2140, 2632, 2684
MunI CAATTG 3 cut(s) 1236, 1559, 3177
Mva1269I GAATGC 1 cut(s) 3286
NcoI CCATGG 1 cut(s) 1576
NlaIII CATG 7 cut(s) 212, 440, 1580, 2101, 2417, 2441, 2795
NlaIV GGNNCC 6 cut(s) 755, 1613, 1845, 1975, 3318, 3426
NspV TTCGAA 1 cut(s) 2932
PceI AGGCCT 1 cut(s) 968
PctI GAATGC 1 cut(s) 3286
PfeI GAWTC 8 cut(s) 56, 179, 782, 986, 1340, 2581, 2906, 3217
PflFI GACNNNGTC 1 cut(s) 1744
PflMI CCANNNNNTGG 1 cut(s) 3059
PleI GAGTC 5 cut(s) 75, 967, 1340, 2377, 2473
PpsI GAGTC 5 cut(s) 75, 967, 1340, 2377, 2473
PsiI TTATAA 2 cut(s) 1838, 3544
Psp124BI GAGCTC 1 cut(s) 3520
PspEI GGTNACC 1 cut(s) 3295
PspFI CCCAGC 1 cut(s) 3125
PspN4I GGNNCC 6 cut(s) 755, 1613, 1845, 1975, 3318, 3426
PspOMI GGGCCC 2 cut(s) 3316, 3424
PspPI GGNCC 8 cut(s) 1795, 1823, 1974, 3316, 3317, 3389, 3424, 3425
PsuI RGATCY 4 cut(s) 1515, 1572, 2401, 2686
PsyI GACNNNGTC 1 cut(s) 1744
PvuII CAGCTG 2 cut(s) 1109, 3185
RsaI GTAC 5 cut(s) 1005, 1902, 1993, 2130, 3010
RsaNI GTAC 5 cut(s) 1004, 1901, 1992, 2129, 3009
RseI CAYNNNNRTG 1 cut(s) 738
SacI GAGCTC 1 cut(s) 3520
SaqAI TTAA 7 cut(s) 893, 1659, 1884, 2213, 2484, 2826, 3464
Sau96I GGNCC 8 cut(s) 1795, 1823, 1974, 3316, 3317, 3389, 3424, 3425
SchI GAGTC 5 cut(s) 76, 967, 1340, 2378, 2474
SduI GDGCHC 6 cut(s) 758, 1593, 2024, 3320, 3428, 3520
SfaNI GCATC 8 cut(s) 610, 931, 1066, 1129, 1162, 2377, 2659, 3217
SfcI CTRYAG 1 cut(s) 1449
SfuI TTCGAA 1 cut(s) 2932
SinI GGWCC 2 cut(s) 1795, 3389
SmiMI CAYNNNNRTG 1 cut(s) 738
SmlI CTYRAG 3 cut(s) 1519, 2308, 2780
SmoI CTYRAG 3 cut(s) 1519, 2308, 2780
SseBI AGGCCT 1 cut(s) 968
SsiI CCGC 7 cut(s) 583, 592, 862, 1085, 1116, 1969, 3122
SspMI CTAG 6 cut(s) 42, 333, 669, 2673, 3006, 3095
SstI GAGCTC 1 cut(s) 3520
StuI AGGCCT 1 cut(s) 968
StyI CCWWGG 6 cut(s) 41, 668, 1292, 1576, 2874, 3088
TaaI ACNGT 6 cut(s) 143, 1233, 1877, 2019, 2158, 2606
TaiI ACGT 1 cut(s) 3472
TaqI TCGA 7 cut(s) 73, 1273, 1717, 2086, 2932, 3286, 3420
TatI WGTACW 2 cut(s) 2128, 3008
TauI GCSGC 1 cut(s) 3125
TfiI GAWTC 8 cut(s) 56, 179, 782, 986, 1340, 2581, 2906, 3217
Tru1I TTAA 7 cut(s) 893, 1659, 1884, 2213, 2484, 2826, 3464
Tru9I TTAA 7 cut(s) 893, 1659, 1884, 2213, 2484, 2826, 3464
TscAI CASTG 3 cut(s) 1701, 1882, 3064
TspGWI ACGGA 2 cut(s) 850, 1944
TspRI CASTG 3 cut(s) 1701, 1882, 3064
Tth111I GACNNNGTC 1 cut(s) 1744
Van91I CCANNNNNTGG 1 cut(s) 3059
VneI GTGCAC 1 cut(s) 2020
VpaK11BI GGWCC 2 cut(s) 1795, 3389
XagI CCTNNNNNAGG 1 cut(s) 957
XapI RAATTY 5 cut(s) 1183, 1492, 1869, 2352, 2822
XmaJI CCTAGG 2 cut(s) 41, 668
XmiI GTMKAC 1 cut(s) 1926
XspI CTAG 6 cut(s) 42, 333, 669, 2673, 3006, 3095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.