Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001376

Physical Location & Seq

Genomic Coordinates Reverse (-)

29568961 .. 29572572

Gene Structure 3612 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G78610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGGCCGTTGATGCGGCTGACCGGCGAGAAGTTATCGTCAAAATCGACGGTGAAAACGGAAACAACAATGGAGTCTCCGGAGAGACTGTAGGAAAGATATGGAGAGACGGAAGCTACGATTTTTGGACTGATGGTGAAGGTAACCTCAACAAAGGTCATAATGCTGCGGCGGTTGATTCTGATAGATCCGCCGCCACGACGGGGGAGCAACAAAAAGATGAGGGTTTTGAGTTTCGTCGCGGCGAAGATCCTCCCACGAAGCTGATTGGTCAGTTTCTCCATAAACAGCAAGCTTCCGGTGAGATTTGTTTAGATATGGACTTAGGTATGGACGAGCTTCAATCTAGAGGTTTAACTCCGGTATCGGAATCTCCGAGAGTTTCTACAAAACGTGACCCCGTGGGAAGACGAGACAGTCGCAGTAATACCAACAATAACGATGATGGAGAAGTTGTCAAGTGTAGTGGTAATAATGCTCCGATTCAGAGAAGCTCTAGCACTTTACTTAAGATGAGAACTAGGTCACGTCTTTCGGATCCGCCAACGCCTCAGTTGCCGCCGCAAACGGCGGATATGAAGTCGGGTCGGATTCCGAAATCCGGGCAGATGAAATCAGGTTTTTTTGGAAAAAGCCCTAAGACTCAAGGTGAGGAAGAAGAAGATGATCCATTTGCAGCAGAGGATTTACCAGAAGAGTATAGGAAAGATAAACTTAGTCTATGGATTGTGTTGGAATGGTTGAGTTTGATTTTGATTATAGCTGGGTTTGTTTGCACTCTTGCGATACCTTCCTTGCGTAAGAAGAAACTCTGGGAACTTCAGCTATGGAAATGGGAGTCAATGGTTTTAGTGTTGATCTGTGGTAGGTTAGTCTCGAGCTGGATTGTGAAGATTGTTGTCTTCTTTATCGAAAGGAACTTTCTTTTGAGGAAAAGAGTTTTGTATTTCGTTTATGGTGTCCGAAAAGCGGTGCAGAATTGCTTATGGTTAGGACTTGTTTTACTGGCTTGGCATTTCTTGTTTGATGAGAAAGTGGCTAAAGCAGCAAACACTAAGGCGCTTCGTGTTGTGACTAAGATCTTTGTGTGTTTGTTGGTTGGGTTCTTGTTGTGGCTCGTGAAGACACTGTTGGTCAAAGTTCTTGCTTCATCGTTTCATATGAGCACTTACTTCGATAGGATTCAAGAGTCTTTGTTTACTCAGTATGTGATTGAGACGCTCTCGGGTCCTCCTTTGATTGAGATCCAAAAAAATGAGGAAGAGGAAGAGAGAATCAGTGTTGAGGTTAAGAAGTTTCAAAATCCAGGGGGTGTTGAGATTCAGTCAGGAGCTCAGAAAAGTCCAATGAAGACCGGGAAAAGCCCGTTTCTCTCTCATGTTCTATCTAATGGAGGAGGGGGAGGAGGAGAAAACAAAGGGATTACGATCGATAGCCTTCATAAGCTGAATCCTAAGAATGTTTCCGCATGGAAAATGAAGAGGCTGATGAATATAATCCGGAATGGATCACTTACCACTTTGGATGAACAGCTTCAGGATCCAAGCTTGGATGATGATAAAGGAAACCAAATTAGAAGTGAGTTTGAGGCAAAGCTCGCTGCAAGAAAGATCTTTCATAATGTTGCTAAGCCAGGATCAAAGTTCATCTATGCAAACGACATAATGCGGTTTCTGCCAGATGACGAAGCTTTGAAGACTTTAAGTCTCTTTGAAGGAGCATCTGAGACGAACAGGATCAGCAAGTCATCTCTTAAAAACTGGGTGGTGAATGCTTTTAGAGAGAGAAGAGCTCTTGCATTGACCCTAAACGACACCAAAACAGCAGTAAACAGGCTTCACAAGATGGTGAATATCGTGGTTGGGATCATCATACTTGTTATCTGGCTTATCATACTTGGAATCACTTCCACCAAATTCCTCGTCGTCATGAGCTCGCAAGTCGTGGTTGTAGCATTCATATTTGGAAACATGTGCAAGATAGTATTTGAATCTATCATCTACTTGTTTGTGATACATCCGTTTGATGTAGGCGATCGATGTGAAATTGATGGAGTCCAGATGGTTGTGGAAGAGATGAACATATTGACAACAGTTTTCTTGAGATTTGATAACCAGAAAGTCGTGTACCCGAACAGTCTTCTCTGGACTAAATCCATCGGAAATTATTACCGTAGTCCTGATATGGGAGATGGTATCGAATTCTCCATCCACATTACTACTCCAGCTGAGAAAATCATACTCATCAAACAGAGAATCACAAGTTACATTGAGGGCAAGAAGGATCATTGGTATCCAGCGCCAATGATAGTATTCAAAGACATGGAGTCATTAAACAGCGTGAGAATTGCGGTTTGGCCAACACATCGAATGAATCATCAAGATATGGGAGAGAAATGGGCTCGAAGGTCTCAACTTGTTGAAGAGATTGCCAAAATTTGCAGAGAGCTTGACATTGAGTATAGATTGTATCCTCTTGATATCAATGTCCGAAACTTGCCCACTTCTACGGCTTTGCCTGTTTCCGACCGTCTTCCACCAAACTGGAGTGCTCCAGCTTCTGGCAGCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008381 GO:0009506 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0030054 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

856

Amino Acids

96.6

Weight (kDa)

8.73

Isoelectric Point (pI)

46.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MS_channel_2nd	PF00924	666 - 723	2.3e-11	Mechanosensitive ion channel, beta-domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78610 AT2G17010 AT2G17010
fragaria_vesca	FvH4_2g15780 FvH4_2g37870 FvH4_2g37870 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430
malus_domestica	MD05G1126700.v1.1 MD08G1006800.v1.1 MD08G1006900.v1.1 MD10G1129900.v1.1
prunus_persica	Prupe.1G358700_v2.0.a1 Prupe.8G170400_v2.0.a1
pyrus_communis	pycom05g12260 pycom08g00530 pycom08g00560 pycom08g00580
rosa_chinensis	RchiOBHm_Chr5g0071021 RchiOBHm_Chr6g0279131 RchiOBHm_Chr6g0303751
rosa_laevigata	RLG00000011049 RLG00000013165 RLG00000036184
rosa_multiflora	Rmu_co8207138.1_g000001 Rmu_co8395065.1_g000001 Rmu_sc0001141.1_g000023 Rmu_sc0012878.1_g000006 Rmu_sc0014203.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010020 Rroxscaffold_7G00164430 Rroxscaffold_7G00189100
rosa_rugosa	Rorug05G0409800 Rorug05G0409900 Rorug05G0410000 Rorug06G0122500 Rorug06G0324500
rosa_samantha	Rh5AG466100 Rh5BG484300 Rh5CG508900 Rh5DG495700 Rh6AG231300 Rh6AG438800 Rh6BG236200 Rh6BG464300 Rh6CG238200 Rh6CG451100 Rh6DG229800 Rh6DG438000
rosa_wichuraiana	Rw5G043280 Rw6G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	414
AccB7I	CCANNNNNTGG	1 cut(s)	2558
AccII	CGCG	1 cut(s)	240
AccIII	TCCGGA	2 cut(s)	77, 1497
AcoI	YGGCCR	2 cut(s)	3, 2354
AcsI	RAATTY	3 cut(s)	1913, 2198, 2433
AcuI	CTGAAG	2 cut(s)	803, 1517
AfaI	GTAC	1 cut(s)	2126
AfiI	CCNNNNNNNGG	5 cut(s)	201, 599, 967, 2183, 2558
AflII	CTTAAG	1 cut(s)	506
AflIII	ACRYGT	1 cut(s)	1968
AgsI	TTSAA	8 cut(s)	341, 1184, 1298, 1693, 1712, 1988, 2314, 2420
AhdI	GACNNNNNGTC	2 cut(s)	1701, 2323
AjiI	CACGTC	1 cut(s)	527
AjnI	CCWGG	2 cut(s)	1303, 1630
AjuI	GAANNNNNNNTTGG	4 cut(s)	1112, 1144, 2335, 2367
Alw21I	GWGCWC	5 cut(s)	1166, 1333, 1792, 1934, 2551
Alw26I	GTCTC	9 cut(s)	77, 79, 99, 405, 877, 1208, 1709, 1718, 2412
AlwNI	CAGNNNCTG	2 cut(s)	2558, 2568
Ama87I	CYCGRG	2 cut(s)	874, 1222
Aor13HI	TCCGGA	2 cut(s)	77, 1497
AoxI	GGCC	2 cut(s)	3, 2354
ApeKI	GCWGC	5 cut(s)	164, 674, 1043, 1598, 2562
ApoI	RAATTY	3 cut(s)	1913, 2198, 2433
ArsI	GACNNNNNNTTYG	2 cut(s)	1905, 1937
Asp700I	GAANNNNTTC	2 cut(s)	1530, 1903
AspLEI	GCGC	2 cut(s)	1060, 2299
AspS9I	GGNCC	1 cut(s)	1226
AsuC2I	CCSGG	2 cut(s)	601, 1354
AsuHPI	GGTGA	6 cut(s)	62, 146, 311, 659, 1777, 1858
AvaI	CYCGRG	2 cut(s)	874, 1222
AvaII	GGWCC	1 cut(s)	1226
BaeI	ACNNNNGTAYC	4 cut(s)	345, 378, 2003, 2036
BalI	TGGCCA	1 cut(s)	2356
BamHI	GGATCC	2 cut(s)	535, 1537
BanII	GRGCYC	4 cut(s)	1333, 1792, 1934, 2401
BarI	GAAGNNNNNNTAC	2 cut(s)	1818, 1850
BauI	CACGAG	1 cut(s)	1115
BbsI	GAAGAC	7 cut(s)	412, 892, 1127, 1355, 1700, 2129, 2522
Bbv12I	GWGCWC	5 cut(s)	1166, 1333, 1792, 1934, 2551
BbvI	GCAGC	4 cut(s)	151, 686, 1055, 1585
BccI	CCATC	8 cut(s)	125, 437, 1837, 2042, 2053, 2162, 2183, 2213
BceAI	ACGGC	2 cut(s)	582, 2523
BcgI	CGANNNNNNTGC	2 cut(s)	1153, 1187
BciT130I	CCWGG	2 cut(s)	1305, 1632
BciVI	GTATCC	2 cut(s)	2301, 2478
BcnI	CCSGG	2 cut(s)	601, 1354
BcoDI	GTCTC	9 cut(s)	77, 79, 99, 405, 877, 1208, 1709, 1718, 2412
BfaI	CTAG	3 cut(s)	345, 495, 519
BfmI	CTRYAG	1 cut(s)	87
BfoI	RGCGCY	2 cut(s)	1061, 2300
BfrI	CTTAAG	1 cut(s)	506
BfuI	GTATCC	2 cut(s)	2301, 2478
BglII	AGATCT	2 cut(s)	1077, 1608
BlpI	GCTNAGC	1 cut(s)	1626
Bme1390I	CCNGG	4 cut(s)	601, 1305, 1354, 1632
Bme18I	GGWCC	1 cut(s)	1226
BmeRI	GACNNNNNGTC	2 cut(s)	1701, 2323
BmeT110I	CYCGRG	2 cut(s)	874, 1222
BmgBI	CACGTC	1 cut(s)	527
BmgT120I	GGNCC	1 cut(s)	1226
BmiI	GGNNCC	3 cut(s)	537, 1227, 1539
BmrFI	CCNGG	4 cut(s)	601, 1305, 1354, 1632
BmrI	ACTGGG	1 cut(s)	1768
BmsI	GCATC	1 cut(s)	1727
BmuI	ACTGGG	1 cut(s)	1768
BpiI	GAAGAC	7 cut(s)	412, 892, 1127, 1355, 1700, 2129, 2522
BplI	GAGNNNNNCTC	4 cut(s)	1205, 1237, 1774, 1806
BpmI	CTGGAG	3 cut(s)	2205, 2535, 2563
Bpu1102I	GCTNAGC	1 cut(s)	1626
BpuEI	CTTGAG	2 cut(s)	627, 2119
BpuMI	CCSGG	2 cut(s)	601, 1354
Bsa29I	ATCGAT	2 cut(s)	1428, 2035
BsaBI	GATNNNNATC	2 cut(s)	1241, 1424
BsaI	GGTCTC	1 cut(s)	2412
BsaJI	CCNNGG	2 cut(s)	399, 1304
BsaWI	WCCGGW	4 cut(s)	77, 296, 358, 1497
BsaXI	ACNNNNNCTCC	4 cut(s)	72, 102, 438, 468
Bsc4I	CCNNNNNNNGG	5 cut(s)	201, 599, 967, 2183, 2558
Bse118I	RCCGGY	1 cut(s)	21
Bse1I	ACTGG	3 cut(s)	1008, 1763, 2546
Bse8I	GATNNNNATC	2 cut(s)	1241, 1424
BseAI	TCCGGA	2 cut(s)	77, 1497
BseBI	CCWGG	2 cut(s)	1305, 1632
BseCI	ATCGAT	2 cut(s)	1428, 2035
BseDI	CCNNGG	2 cut(s)	399, 1304
BseGI	GGATG	4 cut(s)	1528, 1555, 2014, 2205
BseJI	GATNNNNATC	2 cut(s)	1241, 1424
BseLI	CCNNNNNNNGG	5 cut(s)	201, 599, 967, 2183, 2558
BseMII	CTCAG	5 cut(s)	563, 1214, 1346, 1713, 2217
BseNI	ACTGG	3 cut(s)	1008, 1763, 2546
BseRI	GAGGAG	3 cut(s)	1407, 1416, 1419
BseXI	GCAGC	4 cut(s)	151, 686, 1055, 1585
BseYI	CCCAGC	1 cut(s)	761
BsgI	GTGCAG	1 cut(s)	992
Bsh1236I	CGCG	1 cut(s)	240
Bsh1285I	CGRYCG	3 cut(s)	1428, 2035, 2527
BshFI	GGCC	2 cut(s)	5, 2356
BshVI	ATCGAT	2 cut(s)	1428, 2035
BsiEI	CGRYCG	3 cut(s)	1428, 2035, 2527
BsiHKAI	GWGCWC	5 cut(s)	1166, 1333, 1792, 1934, 2551
BsiHKCI	CYCGRG	2 cut(s)	874, 1222
BsiSI	CCGG	7 cut(s)	22, 78, 297, 359, 600, 1353, 1498
BslI	CCNNNNNNNGG	5 cut(s)	201, 599, 967, 2183, 2558
BsmAI	GTCTC	9 cut(s)	77, 79, 99, 405, 877, 1208, 1709, 1718, 2412
BsmBI	CGTCTC	3 cut(s)	99, 1208, 1718
BsmI	GAATGC	2 cut(s)	1774, 1952
BsnI	GGCC	2 cut(s)	5, 2356
Bso31I	GGTCTC	1 cut(s)	2412
BsoBI	CYCGRG	2 cut(s)	874, 1222
Bsp1286I	GDGCHC	6 cut(s)	1166, 1333, 1792, 1934, 2401, 2551
Bsp13I	TCCGGA	2 cut(s)	77, 1497
Bsp1720I	GCTNAGC	1 cut(s)	1626
BspANI	GGCC	2 cut(s)	5, 2356
BspCNI	CTCAG	5 cut(s)	562, 1213, 1345, 1714, 2218
BspDI	ATCGAT	2 cut(s)	1428, 2035
BspEI	TCCGGA	2 cut(s)	77, 1497
BspFNI	CGCG	1 cut(s)	240
BspHI	TCATGA	1 cut(s)	1926
BspLI	GGNNCC	3 cut(s)	537, 1227, 1539
BspQI	GCTCTTC	1 cut(s)	1780
BspTI	CTTAAG	1 cut(s)	506
BspTNI	GGTCTC	1 cut(s)	2412
BsrFI	RCCGGY	1 cut(s)	21
BsrI	ACTGG	3 cut(s)	1008, 1763, 2546
BssAI	RCCGGY	1 cut(s)	21
BssECI	CCNNGG	2 cut(s)	399, 1304
BssSI	CACGAG	1 cut(s)	1115
Bst2BI	CACGAG	1 cut(s)	1115
Bst2UI	CCWGG	2 cut(s)	1305, 1632
Bst4CI	ACNGT	8 cut(s)	50, 88, 416, 1128, 2092, 2135, 2171, 2528
Bst6I	CTCTTC	7 cut(s)	687, 1254, 1260, 1472, 1780, 2064, 2415
BstAFI	CTTAAG	1 cut(s)	506
BstC8I	GCNNGC	3 cut(s)	291, 1596, 1934
BstDSI	CCRYGG	1 cut(s)	399
BstEII	GGTNACC	1 cut(s)	140
BstF5I	GGATG	4 cut(s)	1528, 1555, 2014, 2205
BstFNI	CGCG	1 cut(s)	240
BstH2I	RGCGCY	2 cut(s)	1061, 2300
BstHHI	GCGC	2 cut(s)	1060, 2299
BstMAI	GTCTC	9 cut(s)	77, 79, 99, 405, 877, 1208, 1709, 1718, 2412
BstMCI	CGRYCG	3 cut(s)	1428, 2035, 2527
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 553, 1043, 1595, 1672
BstNI	CCWGG	2 cut(s)	1305, 1632
BstNSI	RCATGY	1 cut(s)	1972
BstPI	GGTNACC	1 cut(s)	140
BstSCI	CCNGG	4 cut(s)	599, 1303, 1352, 1630
BstSFI	CTRYAG	1 cut(s)	87
BstUI	CGCG	1 cut(s)	240
BstV1I	GCAGC	4 cut(s)	151, 686, 1055, 1585
BstV2I	GAAGAC	7 cut(s)	412, 892, 1127, 1355, 1700, 2129, 2522
BstX2I	RGATCY	7 cut(s)	185, 247, 535, 1077, 1242, 1537, 1608
BstXI	CCANNNNNNTGG	1 cut(s)	2541
BstYI	RGATCY	7 cut(s)	185, 247, 535, 1077, 1242, 1537, 1608
Bsu15I	ATCGAT	2 cut(s)	1428, 2035
BsuI	GTATCC	2 cut(s)	2301, 2478
BsuRI	GGCC	2 cut(s)	5, 2356
BsuTUI	ATCGAT	2 cut(s)	1428, 2035
BtgI	CCRYGG	1 cut(s)	399
BtrI	CACGTC	1 cut(s)	527
BtsCI	GGATG	4 cut(s)	1528, 1555, 2014, 2205
BtsIMutI	CAGTG	2 cut(s)	1124, 1282
Cac8I	GCNNGC	3 cut(s)	291, 1596, 1934
CaiI	CAGNNNCTG	2 cut(s)	2558, 2568
CciI	TCATGA	1 cut(s)	1926
CfoI	GCGC	2 cut(s)	1060, 2299
Cfr10I	RCCGGY	1 cut(s)	21
Cfr13I	GGNCC	1 cut(s)	1226
ClaI	ATCGAT	2 cut(s)	1428, 2035
CseI	GACGC	1 cut(s)	1225
Csp6I	GTAC	1 cut(s)	2125
CspCI	CAANNNNNGTGG	2 cut(s)	445, 480
CviAII	CATG	5 cut(s)	1376, 1467, 1927, 1969, 2320
CviQI	GTAC	1 cut(s)	2125
DrdI	GACNNNNNNGTC	1 cut(s)	414
DriI	GACNNNNNGTC	2 cut(s)	1701, 2323
DseDI	GACNNNNNNGTC	1 cut(s)	414
EaeI	YGGCCR	2 cut(s)	3, 2354
Eam1104I	CTCTTC	7 cut(s)	687, 1254, 1260, 1472, 1780, 2064, 2415
Eam1105I	GACNNNNNGTC	2 cut(s)	1701, 2323
EarI	CTCTTC	7 cut(s)	687, 1254, 1260, 1472, 1780, 2064, 2415
EciI	GGCGGA	3 cut(s)	178, 528, 584
Ecl136II	GAGCTC	3 cut(s)	1331, 1790, 1932
Eco24I	GRGCYC	4 cut(s)	1333, 1792, 1934, 2401
Eco31I	GGTCTC	1 cut(s)	2412
Eco32I	GATATC	1 cut(s)	2479
Eco47I	GGWCC	1 cut(s)	1226
Eco53kI	GAGCTC	3 cut(s)	1331, 1790, 1932
Eco57I	CTGAAG	2 cut(s)	803, 1517
Eco88I	CYCGRG	2 cut(s)	874, 1222
Eco91I	GGTNACC	1 cut(s)	140
EcoICRI	GAGCTC	3 cut(s)	1331, 1790, 1932
EcoO109I	RGGNCCY	1 cut(s)	1226
EcoO65I	GGTNACC	1 cut(s)	140
EcoRI	GAATTC	1 cut(s)	2198
EcoRII	CCWGG	2 cut(s)	1303, 1630
EcoRV	GATATC	1 cut(s)	2479
EcoT38I	GRGCYC	4 cut(s)	1333, 1792, 1934, 2401
Esp3I	CGTCTC	3 cut(s)	99, 1208, 1718
FaeI	CATG	5 cut(s)	1379, 1470, 1930, 1972, 2323
FalI	AAGNNNNNCTT	2 cut(s)	696, 728
FatI	CATG	5 cut(s)	1375, 1466, 1926, 1968, 2319
FauNDI	CATATG	1 cut(s)	1158
FokI	GGATG	4 cut(s)	1535, 1562, 2001, 2192
FriOI	GRGCYC	4 cut(s)	1333, 1792, 1934, 2401
FspBI	CTAG	3 cut(s)	345, 495, 519
GlaI	GCGC	2 cut(s)	1059, 2298
GsaI	CCCAGC	1 cut(s)	765
GsuI	CTGGAG	3 cut(s)	2205, 2535, 2563
HaeII	RGCGCY	2 cut(s)	1061, 2300
HaeIII	GGCC	2 cut(s)	5, 2356
HapII	CCGG	7 cut(s)	22, 78, 297, 359, 600, 1353, 1498
HgaI	GACGC	1 cut(s)	1225
HhaI	GCGC	2 cut(s)	1060, 2299
Hin1II	CATG	5 cut(s)	1379, 1470, 1930, 1972, 2323
Hin6I	GCGC	2 cut(s)	1058, 2297
HinP1I	GCGC	2 cut(s)	1058, 2297
HindIII	AAGCTT	3 cut(s)	291, 1543, 1686
HpaII	CCGG	7 cut(s)	22, 78, 297, 359, 600, 1353, 1498
HphI	GGTGA	6 cut(s)	62, 146, 311, 659, 1777, 1858
Hpy166II	GTNNAC	3 cut(s)	1197, 1828, 2125
Hpy8I	GTNNAC	3 cut(s)	1197, 1828, 2125
Hpy99I	CGWCG	4 cut(s)	50, 202, 240, 1925
HpyAV	CCTTC	6 cut(s)	131, 798, 1445, 1706, 2272, 2397
HpyCH4III	ACNGT	8 cut(s)	50, 88, 416, 1128, 2092, 2135, 2171, 2528
HpyCH4IV	ACGT	2 cut(s)	391, 526
HpyCH4V	TGCA	8 cut(s)	674, 774, 973, 1601, 1652, 1796, 1974, 2439
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 553, 1043, 1595, 1672
HpySE526I	ACGT	2 cut(s)	391, 526
Hsp92II	CATG	5 cut(s)	1379, 1470, 1930, 1972, 2323
HspAI	GCGC	2 cut(s)	1058, 2297
Kpn2I	TCCGGA	2 cut(s)	77, 1497
LguI	GCTCTTC	1 cut(s)	1780
LmnI	GCTCC	5 cut(s)	205, 481, 1328, 1715, 2554
Lsp1109I	GCAGC	4 cut(s)	151, 686, 1055, 1585
LweI	GCATC	1 cut(s)	1727
MaeI	CTAG	3 cut(s)	345, 495, 519
MaeII	ACGT	2 cut(s)	391, 526
MaeIII	GTNAC	5 cut(s)	140, 392, 522, 1069, 2261
MflI	RGATCY	7 cut(s)	185, 247, 535, 1077, 1242, 1537, 1608
MhlI	GDGCHC	6 cut(s)	1166, 1333, 1792, 1934, 2401, 2551
MlsI	TGGCCA	1 cut(s)	2356
MluCI	AATT	8 cut(s)	976, 1569, 1913, 2043, 2161, 2198, 2343, 2433
MluNI	TGGCCA	1 cut(s)	2356
MlyI	GAGTC	6 cut(s)	81, 634, 845, 1196, 2061, 2333
MmeI	TCCRAC	3 cut(s)	566, 711, 2547
Mox20I	TGGCCA	1 cut(s)	2356
MroI	TCCGGA	2 cut(s)	77, 1497
MroXI	GAANNNNTTC	2 cut(s)	1530, 1903
MscI	TGGCCA	1 cut(s)	2356
MseI	TTAA	6 cut(s)	353, 507, 1287, 1700, 1752, 2330
Msp20I	TGGCCA	1 cut(s)	2356
MspA1I	CMGCKG	1 cut(s)	2225
MspCI	CTTAAG	1 cut(s)	506
MspI	CCGG	7 cut(s)	22, 78, 297, 359, 600, 1353, 1498
MspR9I	CCNGG	4 cut(s)	601, 1305, 1354, 1632
Mva1269I	GAATGC	2 cut(s)	1774, 1952
MvaI	CCWGG	2 cut(s)	1305, 1632
MvnI	CGCG	1 cut(s)	240
MwoI	GCNNNNNNNGC	5 cut(s)	11, 553, 1043, 1595, 1672
NciI	CCSGG	2 cut(s)	601, 1354
NdeI	CATATG	1 cut(s)	1158
NlaIII	CATG	5 cut(s)	1379, 1470, 1930, 1972, 2323
NlaIV	GGNNCC	3 cut(s)	537, 1227, 1539
NmuCI	GTSAC	3 cut(s)	392, 522, 1069
NspI	RCATGY	1 cut(s)	1972
PaeR7I	CTCGAG	1 cut(s)	874
PagI	TCATGA	1 cut(s)	1926
PciI	ACATGT	1 cut(s)	1968
PciSI	GCTCTTC	1 cut(s)	1780
PcsI	WCGNNNNNNNCGW	3 cut(s)	42, 114, 371
PctI	GAATGC	2 cut(s)	1774, 1952
PdmI	GAANNNNTTC	2 cut(s)	1530, 1903
PflMI	CCANNNNNTGG	1 cut(s)	2558
Ple19I	CGATCG	2 cut(s)	1428, 2035
PleI	GAGTC	6 cut(s)	80, 634, 844, 1195, 2060, 2332
PpsI	GAGTC	6 cut(s)	80, 634, 844, 1195, 2060, 2332
PpuMI	RGGWCCY	1 cut(s)	1226
PscI	ACATGT	1 cut(s)	1968
Psp124BI	GAGCTC	3 cut(s)	1333, 1792, 1934
Psp5II	RGGWCCY	1 cut(s)	1226
Psp6I	CCWGG	2 cut(s)	1303, 1630
PspEI	GGTNACC	1 cut(s)	140
PspFI	CCCAGC	1 cut(s)	761
PspGI	CCWGG	2 cut(s)	1303, 1630
PspN4I	GGNNCC	3 cut(s)	537, 1227, 1539
PspPI	GGNCC	1 cut(s)	1226
PspPPI	RGGWCCY	1 cut(s)	1226
PstNI	CAGNNNCTG	2 cut(s)	2558, 2568
PsuI	RGATCY	7 cut(s)	185, 247, 535, 1077, 1242, 1537, 1608
PvuI	CGATCG	2 cut(s)	1428, 2035
PvuII	CAGCTG	1 cut(s)	2225
RsaI	GTAC	1 cut(s)	2126
RsaNI	GTAC	1 cut(s)	2125
SacI	GAGCTC	3 cut(s)	1333, 1792, 1934
SapI	GCTCTTC	1 cut(s)	1780
SaqAI	TTAA	6 cut(s)	353, 507, 1287, 1700, 1752, 2330
Sau96I	GGNCC	1 cut(s)	1226
SchI	GAGTC	6 cut(s)	81, 634, 845, 1196, 2061, 2333
ScrFI	CCNGG	4 cut(s)	601, 1305, 1354, 1632
SduI	GDGCHC	6 cut(s)	1166, 1333, 1792, 1934, 2401, 2551
SfaNI	GCATC	1 cut(s)	1727
SfcI	CTRYAG	1 cut(s)	87
Sfr274I	CTCGAG	1 cut(s)	874
SinI	GGWCC	1 cut(s)	1226
SlaI	CTCGAG	1 cut(s)	874
SmlI	CTYRAG	4 cut(s)	506, 642, 874, 2098
SmoI	CTYRAG	4 cut(s)	506, 642, 874, 2098
Sse9I	AATT	8 cut(s)	976, 1569, 1913, 2043, 2161, 2198, 2343, 2433
SspMI	CTAG	3 cut(s)	345, 495, 519
SstI	GAGCTC	3 cut(s)	1333, 1792, 1934
StyD4I	CCNGG	4 cut(s)	599, 1303, 1352, 1630
TaaI	ACNGT	8 cut(s)	50, 88, 416, 1128, 2092, 2135, 2171, 2528
TaiI	ACGT	2 cut(s)	394, 529
TaqI	TCGA	9 cut(s)	45, 875, 909, 1173, 1428, 2035, 2196, 2365, 2401
TasI	AATT	8 cut(s)	976, 1569, 1913, 2043, 2161, 2198, 2343, 2433
TauI	GCSGC	6 cut(s)	17, 170, 194, 243, 559, 562
Tru1I	TTAA	6 cut(s)	353, 507, 1287, 1700, 1752, 2330
Tru9I	TTAA	6 cut(s)	353, 507, 1287, 1700, 1752, 2330
TscAI	CASTG	2 cut(s)	1131, 1282
TseFI	GTSAC	3 cut(s)	392, 522, 1069
TseI	GCWGC	5 cut(s)	164, 674, 1043, 1598, 2562
Tsp45I	GTSAC	3 cut(s)	392, 522, 1069
TspGWI	ACGGA	3 cut(s)	72, 123, 2007
TspRI	CASTG	2 cut(s)	1131, 1282
Van91I	CCANNNNNTGG	1 cut(s)	2558
Vha464I	CTTAAG	1 cut(s)	506
VpaK11BI	GGWCC	1 cut(s)	1226
XapI	RAATTY	3 cut(s)	1913, 2198, 2433
XbaI	TCTAGA	1 cut(s)	344
XceI	RCATGY	1 cut(s)	1972
XhoI	CTCGAG	1 cut(s)	874
XmnI	GAANNNNTTC	2 cut(s)	1530, 1903
XspI	CTAG	3 cut(s)	345, 495, 519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.