Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001376

Physical Location & Seq

Genomic Coordinates Reverse (-)

42304641 .. 42309558

Gene Structure 4918 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25037

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGGATTTCTCACTCAAGAAATCCTTCAAATCTCTTGGCTCCGGTAAACACATCTCTGCTTCTGAAGCAGACCACGGCAGCCACGAGAAGCTCCCCATTCTACTGGATCACCACAACGAACAGCACGCAATGAGCGCCGTCGATTCCTCCGACCGCCGCGAGGTCATCGTCAAGATCGACCAGGGCGGCGCTTCCTCCACCACCACTACAGAAGCCGACCCCGCGAAACGCGGCGCCGGGATTTGGAGGGAGTCCAGTATTGATTTCTGGAAGGACGACGGGAGCAATGCCGGCGCCGGCGGGGGTTTTGAGTTTGCTCAGAAGAAGAAGACGGCGGTGAAGACGGAGGAGGAGGAGGAGGAGGATCCGCCGTCGAAGCTGATAGGGCGGTTCCTGCACAAGCAGAGAGCCTCCGGCGACTCGTCGTTGGACATGGATTTGGAGATGGCCGAGCTACGGCAGCAGGATTTGCCGCCGCTGGCGGAGTCTCCGAGGAACTCACGCATGTCGAGGGAGATCAAGGTGTCGTTCCAGTCGTTCCAGTCGCCGGCGTCGGACGTCGCCGAGACCGAGTCTGTTCGGCGGCGGCGCAAGGACCCCGACGACGAGGAACGACGTCGTAGCAGTCGACTGAGTGACGGCGGCGCCGACGTCATTAGGTGCTCGTCGAACGCGTCGTTTAAGGGCAGGTCCGATTTGTTGAGGCTGAAGACGAGGTCTAGATTGATGGACCCGCCCGAGGGGTGGGACGAGGGCGCGGGTCGGGTCCCGAAATCGGGTATGATGAGGTCTGGGATGTTGGGCCGGGGCGGAGGTGACGATGAGGAGGACGACCCGTTTTTGGATGAGGATTTGCCTGATGAGTACAAGAGGGCGAAATTCAATGCGCTGACTCTGCTCCAGTGGCTGAGTTTGGTTTTGATTATTGGGGCATTGGCTTGCACTCTTTCTATAAGAGTTTTGCGGGAGATGAATCTGTGGAAATTGAAGCTGTGGAAATGGGAGGTGCTAATTTTGGTTTCGATTTGTGGGAGGCTGGTTTCGGGTTGGATGATAAAAATTATGGTGTTCTTTGTGGAGAGGAACTTCATTTTGAGGAAGAGGGTGTTGTATTTTGTTTATGGGATCAGGAAGCCTGTTCAGAACTGTATTTGGCTTGGCCTTGTTTTGACGGGTTGGCATTTCTTGCTGATCAGGAAGGTTGAGAAGGAAACCAATGGTAGAATCCTTGAGTATGTGACTAAAGTGTTGCTTTGTCTCTTGATTGGGGGTTTGATTTGGTTGGTGAAGACCCTGGTTGTAAAAGTGCTTGCTTCATCTTTCCATGTTAGATCGTATTTTGATCGGATTCAGGATGCGCTTTTTAATCAGTATGTGATCCAAACACTGTCGGGGCGGCCTTGGATTGAGATAAAAAATGCAGAGGATGAAGAGGAGAGACTTGCTGATGAGGTTAGGAAGCTACAGAATGCTGGGGCTAATATGCCTCCTGACCTCAGGGCAAGTGCATTTCCTTCTGGGACAACTGGGAAGGCCATTGGGAATGGCGGCTCTGGTAGAAGTGGGCGGTTGATTGCTGCAAGTGGAGGGCTTGTGGGGAAGAGTGGCATGTTTTCAAAGCCACTTTCCAAGAAGTCAGGGGAGGTTGGGATCACAATTGATCACTTGCATAGGCTCAATCCAAAGAATGTGTCTGCTTGGAATATGAAGAGGCTAATGAATATAGTAAAATATGGGCATCTTACCACACTGGATGAGCAGATTCTGGATTCAACCAAGGATGAGGGTGAGGGTGATACTAAGATCAAAAGTGAAGTTGAGGCTAAGGCTGCCGCGAAAAAGATATTTCGCAATGTGGCTAGGCCTGGCTCCAAGCACATCTACCTGGAGGATTTGTTGCGTTTCATGCAAGAAGACGAGGCTTTAAAGACCATGAGTCTCTTTGAAGGGGCCTCTGACAGCAAGAGAATCAGCAAAACTTCCTTGAAAAATTGGGTGGTCAATTGCTTTAGAGAACGGAGAGCACTTTCTTTGACTCTAACTGACACCAAAACAGCGGTGAACAGACTTCGACGCGTGGTGGACGTATTAGTTAGCATTATTATTATAATTATATGGCTGCTTGTGCTGGATATTGTCACCAGAGCCAATATTGTTTATGCAACTTCTCAGCTTGTTATTGTGGCCTTTGTTTTTGGTAACTCATGCAAGACAGTCTTTGAAGCAGTCATATTTCTCTTCGTGATGCACCCCTTTGACGTGGGAGATCGATGTGAAATTGAAGGAGTTCAGATGGTTGTAGAGGAGATGAATATCTTAACTACAGTTTTTCTAAGGTATGACAACGTAAAAATCGTGTACCCAAACAGTACCCTTGCAACTAAGCCCATCAATAACTTCTATCGTAGTCCGGACTCAGGAGATGCTGTTGAGTTCTGTATCCATATAGCCACTCCAGCAGATAAGATTGCTGTTATGAAGCAAAGAATGATAAGTTACATTGAAAATAAGAAGGAGCACTGGTATCCTGCACCAATGTTCATATTAAAGGAAGTGGAAGAATTAAATAGGATGAGGTTTGCCATATGGCTGTCACATAGAATGAACTTCCAAGACATGGGAGAAAAGTGGGCAAGGAGAGCCCTTTTACTTGAAGAGATAGTACGGATCCTCCAGGAGCTTGACATTGAGTATCGTTTGCGGCCCATTGACATAAATGTCCGTGGCATGCCTCCCACGGCCACCACTCTGCCTCCCTCTAATTTCACAGCAACCACAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008381 GO:0009506 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0030054 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

927

Amino Acids

104.73

Weight (kDa)

8.91

Isoelectric Point (pI)

50.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MS_channel_2nd	PF00924	744 - 800	1.1e-10	Mechanosensitive ion channel, beta-domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78610 AT2G17010 AT2G17010
fragaria_vesca	FvH4_2g15780 FvH4_2g37870 FvH4_2g37870 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430
malus_domestica	MD05G1126700.v1.1 MD08G1006800.v1.1 MD08G1006900.v1.1 MD10G1129900.v1.1
prunus_persica	Prupe.1G358700_v2.0.a1 Prupe.8G170400_v2.0.a1
pyrus_communis	pycom05g12260 pycom08g00530 pycom08g00560 pycom08g00580
rosa_chinensis	RchiOBHm_Chr5g0071021 RchiOBHm_Chr6g0279131 RchiOBHm_Chr6g0303751
rosa_laevigata	RLG00000011049 RLG00000013165 RLG00000036184
rosa_multiflora	Rmu_co8207138.1_g000001 Rmu_co8395065.1_g000001 Rmu_sc0001141.1_g000023 Rmu_sc0012878.1_g000006 Rmu_sc0014203.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010020 Rroxscaffold_7G00164430 Rroxscaffold_7G00189100
rosa_rugosa	Rorug05G0409800 Rorug05G0409900 Rorug05G0410000 Rorug06G0122500 Rorug06G0324500
rosa_samantha	Rh5AG466100 Rh5BG484300 Rh5CG508900 Rh5DG495700 Rh6AG231300 Rh6AG438800 Rh6BG236200 Rh6BG464300 Rh6CG238200 Rh6CG451100 Rh6DG229800 Rh6DG438000
rosa_wichuraiana	Rw5G043280 Rw6G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2108
AasI	GACNNNNNNGTC	1 cut(s)	2717
AatII	GACGTC	3 cut(s)	561, 619, 654
Acc36I	ACCTGC	1 cut(s)	678
AccB1I	GGYRCC	3 cut(s)	233, 293, 644
AccB7I	CCANNNNNTGG	1 cut(s)	2617
AccI	GTMKAC	1 cut(s)	628
AccII	CGCG	7 cut(s)	159, 224, 231, 674, 758, 1835, 2076
AccIII	TCCGGA	1 cut(s)	2410
AclWI	GGATC	8 cut(s)	114, 359, 372, 1133, 1372, 1658, 2662, 2675
AcoI	YGGCCR	2 cut(s)	447, 2739
AcsI	RAATTY	1 cut(s)	878
AcuI	CTGAAG	2 cut(s)	84, 728
AcyI	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
AfaI	GTAC	4 cut(s)	866, 2360, 2371, 2664
AflIII	ACRYGT	2 cut(s)	672, 2074
AhdI	GACNNNNNGTC	1 cut(s)	1935
AjiI	CACGTC	1 cut(s)	2260
AjnI	CCWGG	5 cut(s)	180, 1293, 1864, 1884, 2673
AluBI	AGCT	8 cut(s)	91, 379, 454, 991, 1462, 2173, 2680, 2781
AluI	AGCT	8 cut(s)	91, 379, 454, 991, 1462, 2173, 2680, 2781
Alw21I	GWGCWC	3 cut(s)	665, 2026, 2520
Alw26I	GTCTC	5 cut(s)	492, 560, 1262, 1432, 1943
AlwI	GGATC	8 cut(s)	114, 359, 372, 1133, 1372, 1658, 2662, 2675
AlwNI	CAGNNNCTG	2 cut(s)	907, 1765
Ama87I	CYCGRG	1 cut(s)	737
Aor13HI	TCCGGA	1 cut(s)	2410
ApeKI	GCWGC	5 cut(s)	78, 460, 1577, 1829, 2119
ApoI	RAATTY	1 cut(s)	878
ArsI	GACNNNNNNTTYG	2 cut(s)	1676, 1708
Asp700I	GAANNNNTTC	2 cut(s)	23, 2286
AspLEI	GCGC	9 cut(s)	137, 191, 236, 296, 591, 647, 758, 889, 1360
AspS9I	GGNCC	7 cut(s)	595, 690, 730, 766, 802, 1950, 2703
AsuC2I	CCSGG	2 cut(s)	238, 806
AsuHPI	GGTGA	8 cut(s)	101, 349, 827, 1297, 1799, 1805, 2071, 2131
AvaI	CYCGRG	1 cut(s)	737
AvaII	GGWCC	4 cut(s)	595, 690, 730, 766
AxyI	CCTNAGG	1 cut(s)	1496
BamHI	GGATCC	2 cut(s)	364, 2667
BanI	GGYRCC	3 cut(s)	233, 293, 644
BanII	GRGCYC	1 cut(s)	2644
BarI	GAAGNNNNNNTAC	2 cut(s)	2646, 2678
BauI	CACGAG	1 cut(s)	83
BbsI	GAAGAC	5 cut(s)	335, 347, 716, 1295, 1920
Bbv12I	GWGCWC	3 cut(s)	665, 2026, 2520
BbvI	GCAGC	5 cut(s)	90, 472, 1564, 1816, 2106
BccI	CCATC	4 cut(s)	439, 721, 2287, 2396
BceAI	ACGGC	7 cut(s)	91, 122, 348, 355, 473, 655, 2754
BciT130I	CCWGG	5 cut(s)	182, 1295, 1866, 1886, 2675
BciVI	GTATCC	2 cut(s)	2450, 2535
BclI	TGATCA	2 cut(s)	1191, 1660
BcnI	CCSGG	2 cut(s)	238, 806
BcoDI	GTCTC	5 cut(s)	492, 560, 1262, 1432, 1943
BfaI	CTAG	2 cut(s)	720, 1860
BfmI	CTRYAG	3 cut(s)	207, 1463, 2322
BfoI	RGCGCY	5 cut(s)	138, 192, 237, 297, 648
BfuAI	ACCTGC	1 cut(s)	678
BfuI	GTATCC	2 cut(s)	2450, 2535
Bme1390I	CCNGG	7 cut(s)	182, 238, 806, 1295, 1866, 1886, 2675
Bme18I	GGWCC	4 cut(s)	595, 690, 730, 766
BmeRI	GACNNNNNGTC	1 cut(s)	1935
BmeT110I	CYCGRG	1 cut(s)	737
BmgBI	CACGTC	1 cut(s)	2260
BmgT120I	GGNCC	7 cut(s)	595, 690, 730, 766, 802, 1950, 2703
BmrFI	CCNGG	7 cut(s)	182, 238, 806, 1295, 1866, 1886, 2675
BmrI	ACTGGG	1 cut(s)	1536
BmsI	GCATC	4 cut(s)	1345, 1747, 2235, 2413
BmuI	ACTGGG	1 cut(s)	1536
BpiI	GAAGAC	5 cut(s)	335, 347, 716, 1295, 1920
BpmI	CTGGAG	4 cut(s)	884, 1907, 2439, 2657
Bpu10I	CCTNAGC	1 cut(s)	1824
BpuEI	CTTGAG	1 cut(s)	1250
BpuMI	CCSGG	2 cut(s)	238, 806
Bsa29I	ATCGAT	1 cut(s)	2269
BsaBI	GATNNNNATC	1 cut(s)	2312
BsaHI	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
BsaI	GGTCTC	1 cut(s)	560
BsaWI	WCCGGW	2 cut(s)	41, 2410
Bse118I	RCCGGY	3 cut(s)	290, 296, 547
Bse1I	ACTGG	8 cut(s)	108, 255, 532, 541, 901, 1531, 1755, 2525
Bse21I	CCTNAGG	1 cut(s)	1496
Bse3DI	GCAATG	3 cut(s)	135, 292, 1858
Bse8I	GATNNNNATC	1 cut(s)	2312
BseAI	TCCGGA	1 cut(s)	2410
BseBI	CCWGG	5 cut(s)	182, 1295, 1866, 1886, 2675
BseCI	ATCGAT	1 cut(s)	2269
BseGI	GGATG	8 cut(s)	801, 850, 1056, 1360, 1432, 1759, 1786, 2577
BseJI	GATNNNNATC	1 cut(s)	2312
BseMI	GCAATG	3 cut(s)	135, 292, 1858
BseMII	CTCAG	6 cut(s)	332, 623, 899, 1510, 2183, 2430
BseNI	ACTGG	8 cut(s)	108, 255, 532, 541, 901, 1531, 1755, 2525
BseRI	GAGGAG	8 cut(s)	362, 365, 368, 371, 374, 839, 1448, 2318
BseXI	GCAGC	5 cut(s)	90, 472, 1564, 1816, 2106
BseYI	CCCAGC	1 cut(s)	1472
BsgI	GTGCAG	2 cut(s)	380, 2514
Bsh1236I	CGCG	7 cut(s)	159, 224, 231, 674, 758, 1835, 2076
Bsh1285I	CGRYCG	1 cut(s)	154
BshNI	GGYRCC	3 cut(s)	233, 293, 644
BshVI	ATCGAT	1 cut(s)	2269
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	3 cut(s)	665, 2026, 2520
BsiHKCI	CYCGRG	1 cut(s)	737
BsiSI	CCGG	8 cut(s)	42, 237, 291, 297, 414, 548, 805, 2411
BslFI	GGGAC	3 cut(s)	752, 761, 1534
BsmAI	GTCTC	5 cut(s)	492, 560, 1262, 1432, 1943
BsmFI	GGGAC	3 cut(s)	752, 761, 1534
BsmI	GAATGC	1 cut(s)	1474
Bso31I	GGTCTC	1 cut(s)	560
BsoBI	CYCGRG	1 cut(s)	737
Bsp1286I	GDGCHC	4 cut(s)	665, 2026, 2520, 2644
Bsp13I	TCCGGA	1 cut(s)	2410
BspCNI	CTCAG	6 cut(s)	331, 624, 900, 1509, 2182, 2429
BspDI	ATCGAT	1 cut(s)	2269
BspEI	TCCGGA	1 cut(s)	2410
BspFNI	CGCG	7 cut(s)	159, 224, 231, 674, 758, 1835, 2076
BspMI	ACCTGC	1 cut(s)	678
BspPI	GGATC	8 cut(s)	114, 359, 372, 1133, 1372, 1658, 2662, 2675
BspT107I	GGYRCC	3 cut(s)	233, 293, 644
BspTNI	GGTCTC	1 cut(s)	560
BsrDI	GCAATG	3 cut(s)	135, 292, 1858
BsrFI	RCCGGY	3 cut(s)	290, 296, 547
BsrI	ACTGG	8 cut(s)	108, 255, 532, 541, 901, 1531, 1755, 2525
BssAI	RCCGGY	3 cut(s)	290, 296, 547
BssNI	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
BssSI	CACGAG	1 cut(s)	83
BssT1I	CCWWGG	2 cut(s)	1400, 1776
Bst2BI	CACGAG	1 cut(s)	83
Bst2UI	CCWGG	5 cut(s)	182, 1295, 1866, 1886, 2675
Bst4CI	ACNGT	5 cut(s)	1148, 1389, 2215, 2326, 2369
Bst6I	CTCTTC	6 cut(s)	1094, 1425, 1595, 1703, 2243, 2649
BstACI	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
BstAPI	GCANNNNNTGC	2 cut(s)	469, 1186
BstC8I	GCNNGC	8 cut(s)	126, 292, 298, 480, 549, 940, 1311, 2729
BstDSI	CCRYGG	3 cut(s)	73, 2722, 2736
BstF5I	GGATG	8 cut(s)	801, 850, 1056, 1360, 1432, 1759, 1786, 2577
BstFNI	CGCG	7 cut(s)	159, 224, 231, 674, 758, 1835, 2076
BstH2I	RGCGCY	5 cut(s)	138, 192, 237, 297, 648
BstHHI	GCGC	9 cut(s)	137, 191, 236, 296, 591, 647, 758, 889, 1360
BstMAI	GTCTC	5 cut(s)	492, 560, 1262, 1432, 1943
BstMCI	CGRYCG	1 cut(s)	154
BstNI	CCWGG	5 cut(s)	182, 1295, 1866, 1886, 2675
BstNSI	RCATGY	3 cut(s)	508, 1612, 2731
BstSCI	CCNGG	7 cut(s)	180, 236, 804, 1293, 1864, 1884, 2673
BstSFI	CTRYAG	3 cut(s)	207, 1463, 2322
BstUI	CGCG	7 cut(s)	159, 224, 231, 674, 758, 1835, 2076
BstV1I	GCAGC	5 cut(s)	90, 472, 1564, 1816, 2106
BstV2I	GAAGAC	5 cut(s)	335, 347, 716, 1295, 1920
BstX2I	RGATCY	2 cut(s)	364, 2667
BstXI	CCANNNNNNTGG	1 cut(s)	103
BstYI	RGATCY	2 cut(s)	364, 2667
Bsu15I	ATCGAT	1 cut(s)	2269
Bsu36I	CCTNAGG	1 cut(s)	1496
BsuI	GTATCC	2 cut(s)	2450, 2535
BsuTUI	ATCGAT	1 cut(s)	2269
BtgI	CCRYGG	3 cut(s)	73, 2722, 2736
BtrI	CACGTC	1 cut(s)	2260
BtsCI	GGATG	8 cut(s)	801, 850, 1056, 1360, 1432, 1759, 1786, 2577
BtsIMutI	CAGTG	4 cut(s)	908, 1385, 1748, 2518
BveI	ACCTGC	1 cut(s)	678
Cac8I	GCNNGC	8 cut(s)	126, 292, 298, 480, 549, 940, 1311, 2729
CaiI	CAGNNNCTG	2 cut(s)	907, 1765
CfoI	GCGC	9 cut(s)	137, 191, 236, 296, 591, 647, 758, 889, 1360
Cfr10I	RCCGGY	3 cut(s)	290, 296, 547
Cfr13I	GGNCC	7 cut(s)	595, 690, 730, 766, 802, 1950, 2703
ClaI	ATCGAT	1 cut(s)	2269
CseI	GACGC	3 cut(s)	540, 663, 2082
Csp6I	GTAC	4 cut(s)	865, 2359, 2370, 2663
CviAII	CATG	9 cut(s)	433, 505, 1325, 1609, 1906, 1933, 2205, 2617, 2728
CviQI	GTAC	4 cut(s)	865, 2359, 2370, 2663
DinI	GGCGCC	3 cut(s)	235, 295, 646
DraI	TTTAAA	1 cut(s)	1926
DrdI	GACNNNNNNGTC	1 cut(s)	2717
DriI	GACNNNNNGTC	1 cut(s)	1935
DseDI	GACNNNNNNGTC	1 cut(s)	2717
EaeI	YGGCCR	2 cut(s)	447, 2739
Eam1104I	CTCTTC	6 cut(s)	1094, 1425, 1595, 1703, 2243, 2649
Eam1105I	GACNNNNNGTC	1 cut(s)	1935
EarI	CTCTTC	6 cut(s)	1094, 1425, 1595, 1703, 2243, 2649
EciI	GGCGGA	3 cut(s)	357, 497, 825
Eco130I	CCWWGG	2 cut(s)	1400, 1776
Eco147I	AGGCCT	1 cut(s)	1864
Eco24I	GRGCYC	1 cut(s)	2644
Eco31I	GGTCTC	1 cut(s)	560
Eco47I	GGWCC	4 cut(s)	595, 690, 730, 766
Eco57I	CTGAAG	2 cut(s)	84, 728
Eco81I	CCTNAGG	1 cut(s)	1496
Eco88I	CYCGRG	1 cut(s)	737
EcoO109I	RGGNCCY	3 cut(s)	595, 766, 1950
EcoRII	CCWGG	5 cut(s)	180, 1293, 1864, 1884, 2673
EcoT14I	CCWWGG	2 cut(s)	1400, 1776
EcoT38I	GRGCYC	1 cut(s)	2644
EgeI	GGCGCC	3 cut(s)	235, 295, 646
EheI	GGCGCC	3 cut(s)	235, 295, 646
ErhI	CCWWGG	2 cut(s)	1400, 1776
FaeI	CATG	9 cut(s)	436, 508, 1328, 1612, 1909, 1936, 2208, 2620, 2731
FalI	AAGNNNNNCTT	6 cut(s)	8, 40, 1236, 1268, 2201, 2233
FaqI	GGGAC	3 cut(s)	752, 761, 1534
FatI	CATG	9 cut(s)	432, 504, 1324, 1608, 1905, 1932, 2204, 2616, 2727
FauI	CCCGC	5 cut(s)	229, 293, 741, 751, 957
FauNDI	CATATG	1 cut(s)	2585
FbaI	TGATCA	2 cut(s)	1191, 1660
FblI	GTMKAC	1 cut(s)	628
FokI	GGATG	8 cut(s)	808, 857, 1063, 1367, 1439, 1766, 1793, 2584
FriOI	GRGCYC	1 cut(s)	2644
FspBI	CTAG	2 cut(s)	720, 1860
GlaI	GCGC	9 cut(s)	136, 190, 235, 295, 590, 646, 757, 888, 1359
GsaI	CCCAGC	1 cut(s)	1476
GsuI	CTGGAG	4 cut(s)	884, 1907, 2439, 2657
HaeII	RGCGCY	5 cut(s)	138, 192, 237, 297, 648
HapII	CCGG	8 cut(s)	42, 237, 291, 297, 414, 548, 805, 2411
HgaI	GACGC	3 cut(s)	540, 663, 2082
HhaI	GCGC	9 cut(s)	137, 191, 236, 296, 591, 647, 758, 889, 1360
Hin1I	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
Hin1II	CATG	9 cut(s)	436, 508, 1328, 1612, 1909, 1936, 2208, 2620, 2731
Hin6I	GCGC	9 cut(s)	135, 189, 234, 294, 589, 645, 756, 887, 1358
HinP1I	GCGC	9 cut(s)	135, 189, 234, 294, 589, 645, 756, 887, 1358
HincII	GTYRAC	1 cut(s)	629
HindII	GTYRAC	1 cut(s)	629
HpaII	CCGG	8 cut(s)	42, 237, 291, 297, 414, 548, 805, 2411
HphI	GGTGA	8 cut(s)	101, 349, 827, 1297, 1799, 1805, 2071, 2131
Hpy166II	GTNNAC	5 cut(s)	47, 629, 2062, 2083, 2359
Hpy8I	GTNNAC	5 cut(s)	47, 629, 2062, 2083, 2359
HpyAV	CCTTC	9 cut(s)	34, 265, 1192, 1201, 1524, 1525, 1940, 2276, 2506
HpyCH4III	ACNGT	5 cut(s)	1148, 1389, 2215, 2326, 2369
HpyCH4IV	ACGT	6 cut(s)	558, 616, 651, 2085, 2259, 2346
HpySE526I	ACGT	6 cut(s)	558, 616, 651, 2085, 2259, 2346
Hsp92I	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
Hsp92II	CATG	9 cut(s)	436, 508, 1328, 1612, 1909, 1936, 2208, 2620, 2731
HspAI	GCGC	9 cut(s)	135, 189, 234, 294, 589, 645, 756, 887, 1358
KasI	GGCGCC	3 cut(s)	233, 293, 644
KflI	GGGWCCC	1 cut(s)	766
Kpn2I	TCCGGA	1 cut(s)	2410
KroI	GCCGGC	3 cut(s)	290, 296, 547
KroNI	GCCGGC	3 cut(s)	292, 298, 549
Ksp22I	TGATCA	2 cut(s)	1191, 1660
LmnI	GCTCC	7 cut(s)	44, 96, 282, 903, 1874, 2515, 2677
Lsp1109I	GCAGC	5 cut(s)	90, 472, 1564, 1816, 2106
LweI	GCATC	4 cut(s)	1345, 1747, 2235, 2413
MaeI	CTAG	2 cut(s)	720, 1860
MaeII	ACGT	6 cut(s)	558, 616, 651, 2085, 2259, 2346
MaeIII	GTNAC	7 cut(s)	635, 815, 1237, 2137, 2198, 2495, 2592
MfeI	CAATTG	2 cut(s)	1656, 2002
MflI	RGATCY	2 cut(s)	364, 2667
MhlI	GDGCHC	4 cut(s)	665, 2026, 2520, 2644
MluI	ACGCGT	2 cut(s)	672, 2074
Mly113I	GGCGCC	3 cut(s)	234, 294, 645
MlyI	GAGTC	8 cut(s)	260, 413, 494, 581, 886, 1945, 2029, 2408
MmeI	TCCRAC	4 cut(s)	174, 408, 534, 1028
MreI	CGCCGGCG	2 cut(s)	296, 547
MroI	TCCGGA	1 cut(s)	2410
MroNI	GCCGGC	3 cut(s)	290, 296, 547
MroXI	GAANNNNTTC	2 cut(s)	23, 2286
MseI	TTAA	6 cut(s)	681, 1365, 1925, 2318, 2546, 2564
MspA1I	CMGCKG	2 cut(s)	478, 2057
MspI	CCGG	8 cut(s)	42, 237, 291, 297, 414, 548, 805, 2411
MspR9I	CCNGG	7 cut(s)	182, 238, 806, 1295, 1866, 1886, 2675
MunI	CAATTG	2 cut(s)	1656, 2002
Mva1269I	GAATGC	1 cut(s)	1474
MvaI	CCWGG	5 cut(s)	182, 1295, 1866, 1886, 2675
MvnI	CGCG	7 cut(s)	159, 224, 231, 674, 758, 1835, 2076
NaeI	GCCGGC	3 cut(s)	292, 298, 549
NarI	GGCGCC	3 cut(s)	234, 294, 645
NciI	CCSGG	2 cut(s)	238, 806
NdeI	CATATG	1 cut(s)	2585
NgoMIV	GCCGGC	3 cut(s)	290, 296, 547
NlaIII	CATG	9 cut(s)	436, 508, 1328, 1612, 1909, 1936, 2208, 2620, 2731
NmeAIII	GCCGAG	2 cut(s)	475, 589
NmuCI	GTSAC	5 cut(s)	635, 815, 1237, 2137, 2592
NspI	RCATGY	3 cut(s)	508, 1612, 2731
PaeI	GCATGC	1 cut(s)	2731
PceI	AGGCCT	1 cut(s)	1864
PctI	GAATGC	1 cut(s)	1474
PdiI	GCCGGC	3 cut(s)	292, 298, 549
PdmI	GAANNNNTTC	2 cut(s)	23, 2286
PfeI	GAWTC	7 cut(s)	143, 973, 1224, 1348, 1762, 1769, 1968
PflFI	GACNNNGTC	2 cut(s)	571, 715
PflMI	CCANNNNNTGG	1 cut(s)	2617
PfoI	TCCNGGA	1 cut(s)	2673
PleI	GAGTC	8 cut(s)	259, 413, 493, 580, 886, 1944, 2029, 2408
PluTI	GGCGCC	3 cut(s)	237, 297, 648
PpsI	GAGTC	8 cut(s)	259, 413, 493, 580, 886, 1944, 2029, 2408
PpuMI	RGGWCCY	2 cut(s)	595, 766
PsiI	TTATAA	1 cut(s)	2108
Psp5II	RGGWCCY	2 cut(s)	595, 766
Psp6I	CCWGG	5 cut(s)	180, 1293, 1864, 1884, 2673
PspFI	CCCAGC	1 cut(s)	1472
PspGI	CCWGG	5 cut(s)	180, 1293, 1864, 1884, 2673
PspPI	GGNCC	7 cut(s)	595, 690, 730, 766, 802, 1950, 2703
PspPPI	RGGWCCY	2 cut(s)	595, 766
PstNI	CAGNNNCTG	2 cut(s)	907, 1765
PsuI	RGATCY	2 cut(s)	364, 2667
PsyI	GACNNNGTC	2 cut(s)	571, 715
RsaI	GTAC	4 cut(s)	866, 2360, 2371, 2664
RsaNI	GTAC	4 cut(s)	865, 2359, 2370, 2663
SalI	GTCGAC	1 cut(s)	627
SaqAI	TTAA	6 cut(s)	681, 1365, 1925, 2318, 2546, 2564
Sau96I	GGNCC	7 cut(s)	595, 690, 730, 766, 802, 1950, 2703
SchI	GAGTC	8 cut(s)	260, 413, 494, 581, 886, 1945, 2029, 2408
ScrFI	CCNGG	7 cut(s)	182, 238, 806, 1295, 1866, 1886, 2675
SduI	GDGCHC	4 cut(s)	665, 2026, 2520, 2644
SfaNI	GCATC	4 cut(s)	1345, 1747, 2235, 2413
SfcI	CTRYAG	3 cut(s)	207, 1463, 2322
SfoI	GGCGCC	3 cut(s)	235, 295, 646
SgrAI	CRCCGGYG	2 cut(s)	296, 547
SinI	GGWCC	4 cut(s)	595, 690, 730, 766
SmlI	CTYRAG	2 cut(s)	14, 1229
SmoI	CTYRAG	2 cut(s)	14, 1229
SphI	GCATGC	1 cut(s)	2731
SseBI	AGGCCT	1 cut(s)	1864
SspDI	GGCGCC	3 cut(s)	233, 293, 644
SspI	AATATT	1 cut(s)	2152
SspMI	CTAG	2 cut(s)	720, 1860
StuI	AGGCCT	1 cut(s)	1864
StyD4I	CCNGG	7 cut(s)	180, 236, 804, 1293, 1864, 1884, 2673
StyI	CCWWGG	2 cut(s)	1400, 1776
TaaI	ACNGT	5 cut(s)	1148, 1389, 2215, 2326, 2369
TaiI	ACGT	6 cut(s)	561, 619, 654, 2088, 2262, 2349
TaqI	TCGA	9 cut(s)	141, 177, 374, 509, 628, 668, 1022, 2071, 2269
TaqII	GACCGA	1 cut(s)	584
TatI	WGTACW	1 cut(s)	864
TfiI	GAWTC	7 cut(s)	143, 973, 1224, 1348, 1762, 1769, 1968
Tru1I	TTAA	6 cut(s)	681, 1365, 1925, 2318, 2546, 2564
Tru9I	TTAA	6 cut(s)	681, 1365, 1925, 2318, 2546, 2564
TscAI	CASTG	4 cut(s)	908, 1392, 1755, 2525
TseFI	GTSAC	5 cut(s)	635, 815, 1237, 2137, 2592
TseI	GCWGC	5 cut(s)	78, 460, 1577, 1829, 2119
Tsp45I	GTSAC	5 cut(s)	635, 815, 1237, 2137, 2592
TspGWI	ACGGA	4 cut(s)	359, 2032, 2680, 2711
TspRI	CASTG	4 cut(s)	908, 1392, 1755, 2525
Tth111I	GACNNNGTC	2 cut(s)	571, 715
Van91I	CCANNNNNTGG	1 cut(s)	2617
VpaK11BI	GGWCC	4 cut(s)	595, 690, 730, 766
XapI	RAATTY	1 cut(s)	878
XbaI	TCTAGA	1 cut(s)	719
XceI	RCATGY	3 cut(s)	508, 1612, 2731
XmiI	GTMKAC	1 cut(s)	628
XmnI	GAANNNNTTC	2 cut(s)	23, 2286
XspI	CTAG	2 cut(s)	720, 1860
ZraI	GACGTC	3 cut(s)	559, 617, 652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.