Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014203.1

Orthogroup ID

OG0001376

Physical Location & Seq

Genomic Coordinates Forward (+)

63476 .. 67870

Gene Structure 4395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014203.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

atggatttctcactcaagaaatccttcaaatctcttggctccggtaaacacatctctgccgaagcagaccacggcagccacgagaagctccccattctactggatcaccacaacgaacagcacgcaatgagcgccgtcgattcctacgaccgccgcgaggtcatcgtcaagatcgacgagggcggcgcttcctccaccaccactacagaagccgaccccgcgaaaggcggcgccgggatttggagggagtccagtattgatttctggaaggacgacgggagcaatgccggctccggcgggggttttgagtttgctcagaagaagaagacggcggcgaagactgaggaggaggaggaggatccgccgtcgaagctgatagggaggttcctgcacaagcagagagcctccggcgactcgtcgctggacatggatttggagatggccgagctacggccgcaggatttgccgccgctggcggagtctccgaggaactcacgcacgtcgagggagatcaaggtgtcgttccagtcgttccagtcgccggcgtcggacgtcgccgagaccgagtctgttcggcggcggcgcaaggaccccgacgacggggaacgacgtcgtagcagtcgactgagtgacggcggcgccgacgtcgttaggtgctcgtcgaacgcgtcgtttaagagcaggtccgatttgttgaggctgaagacgaggtctagattgatggacccgcccgaggggtgggacgatggcgcgggtcgggtcccgaaatcgggtatgatgaggtctgggatgttgggccggggcggaggtgacgatgaggaggacgacccgtttttggaggaggatttgcctgatgagtacaagagggcgaagttcaatgcgctgactctgctccagtggctgagtttggttttgattattggggcattggcttgcactctttctataagagttttgagggagatgaatctgtggaaattgaagctgtggaaatgggaggtgctgattttggtttcgatttgtgggaggctggtttcgggttggatgataaaaattatggtgttctttgtggagaggaacttcattttgaggaagagggtattgtattttgtttatgggatcaggaagcctgttcagaactgtatttggcttggccttgttttgacgggttggcatttcttgctgatcaggaaggttgagaaggaaaccaatggtagaatccttgagtatgtgactaaagtgttgctttgtctcttgattgggggtttgatttggttggtgaagaccctggttgtaaaagtgcttgcttcgtctttccatgttagatcgtattttgatcggattcaggatgcgctttttaatcagtatgtgatccaaacactgtcggggcggccttggattgagataaaaaatgcagaggatgaagaggagagacttgctgatgaggttaggaagctacagaatgctggggctaatatgcctcctgacctcagggcaagtgcatttccttctgggacaactgggaaggcggttgggaatggcggctctggtagaagtgggcggttgattgctgcaagtggagggcttgtggggaagagtggcatgttttcaaagccactttccaagaagtcaggggaggttgggatcacaattgatcacttgcataggctcaatccaaagaatgtgtctgcttggaatatgaagaggctaatgaatatagtaaaatatgggcatcttaccacactggatgagcagattctggattcaaccaaggatgagggtgagggtgatactaagatcaaaagtgaagttgaggcaaaggctgccgcgaaaaagatatttcgcaatgtggctaggcctggctccaagcacatctacctggaggatttgttgcgtttcatgcaagaagatgaggctttaaagaccatgagtctctttgaaggggcctctgacagcaagagaatcagcaaaacttccttgaaaaattgggtggtcaattgctttagagaacggagagcacttgctttgactctaactgacaccaaaacagcggtgaacagacttcgacgcgtggtggacgtattagttagcattattattataattatatggctgcttgtgctggatattgtcaccagagccaatattgtttatgcaacttctcagcttgtgattgtggcctttgtttttggtaactcatgcaagacagtctttgaagcagtcatatttctattcgtgatgcacccctttgacgtgggagatcgatgtgaaattgaaggagttcagatggttgtagaggagatgaatatcttaactacagtttttctaagtccggactcaggagatgctgttgagttctgtgtccatatagccactccagcagataagattgctgttatgaagcaaagaatgataagttacattgaaaataagaaggagcactggtatcctgcaccaatgttcatattaaaggaagtggaagaattaaataggatgaggtttgccatttggctgtcacatagaatgaacttccaagacatgggagaaaagtgggcaaggagagcccttttacttgaagagatagtacggatcctccaggagcttgacattgagtatcgtttgcggcccattgacataaacgtccgtggcatgcctcccacggccaccactctgcctccctctaatttcacagcaaccacaagctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008381 GO:0009506 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0030054 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

901

Amino Acids

101.45

Weight (kDa)

8.74

Isoelectric Point (pI)

49.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78610 AT2G17010 AT2G17010
fragaria_vesca	FvH4_2g15780 FvH4_2g37870 FvH4_2g37870 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430
malus_domestica	MD05G1126700.v1.1 MD08G1006800.v1.1 MD08G1006900.v1.1 MD10G1129900.v1.1
prunus_persica	Prupe.1G358700_v2.0.a1 Prupe.8G170400_v2.0.a1
pyrus_communis	pycom05g12260 pycom08g00530 pycom08g00560 pycom08g00580
rosa_chinensis	RchiOBHm_Chr5g0071021 RchiOBHm_Chr6g0279131 RchiOBHm_Chr6g0303751
rosa_laevigata	RLG00000011049 RLG00000013165 RLG00000036184
rosa_multiflora	Rmu_co8207138.1_g000001 Rmu_co8395065.1_g000001 Rmu_sc0001141.1_g000023 Rmu_sc0012878.1_g000006 Rmu_sc0014203.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010020 Rroxscaffold_7G00164430 Rroxscaffold_7G00189100
rosa_rugosa	Rorug05G0409800 Rorug05G0409900 Rorug05G0410000 Rorug06G0122500 Rorug06G0324500
rosa_samantha	Rh5AG466100 Rh5BG484300 Rh5CG508900 Rh5DG495700 Rh6AG231300 Rh6AG438800 Rh6BG236200 Rh6BG464300 Rh6CG238200 Rh6CG451100 Rh6DG229800 Rh6DG438000
rosa_wichuraiana	Rw5G043280 Rw6G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2102
AasI	GACNNNNNNGTC	1 cut(s)	2639
AatII	GACGTC	3 cut(s)	555, 613, 648
Acc36I	ACCTGC	1 cut(s)	672
AccB1I	GGYRCC	2 cut(s)	230, 638
AccB7I	CCANNNNNTGG	1 cut(s)	2539
AccI	GTMKAC	1 cut(s)	622
AccII	CGCG	6 cut(s)	156, 221, 668, 752, 1829, 2070
AccIII	TCCGGA	1 cut(s)	2332
AclWI	GGATC	8 cut(s)	111, 353, 366, 1127, 1366, 1652, 2584, 2597
AcoI	YGGCCR	3 cut(s)	441, 452, 2661
AcuI	CTGAAG	1 cut(s)	722
AcyI	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
AfaI	GTAC	2 cut(s)	860, 2586
AflIII	ACRYGT	2 cut(s)	666, 2068
AhdI	GACNNNNNGTC	1 cut(s)	1929
AjiI	CACGTC	2 cut(s)	501, 2254
AjnI	CCWGG	4 cut(s)	1287, 1858, 1878, 2595
AluBI	AGCT	8 cut(s)	88, 373, 448, 985, 1456, 2167, 2602, 2703
AluI	AGCT	8 cut(s)	88, 373, 448, 985, 1456, 2167, 2602, 2703
Alw21I	GWGCWC	3 cut(s)	659, 2020, 2442
Alw26I	GTCTC	5 cut(s)	486, 554, 1256, 1426, 1937
AlwI	GGATC	8 cut(s)	111, 353, 366, 1127, 1366, 1652, 2584, 2597
AlwNI	CAGNNNCTG	2 cut(s)	901, 1759
Ama87I	CYCGRG	1 cut(s)	731
Aor13HI	TCCGGA	1 cut(s)	2332
ApeKI	GCWGC	4 cut(s)	75, 1571, 1823, 2113
ArsI	GACNNNNNNTTYG	2 cut(s)	1670, 1702
Asp700I	GAANNNNTTC	2 cut(s)	23, 2280
AspLEI	GCGC	8 cut(s)	134, 188, 233, 585, 641, 752, 883, 1354
AspS9I	GGNCC	7 cut(s)	589, 684, 724, 760, 796, 1944, 2625
AsuC2I	CCSGG	2 cut(s)	235, 800
AsuHPI	GGTGA	7 cut(s)	98, 821, 1291, 1793, 1799, 2065, 2125
AvaI	CYCGRG	1 cut(s)	731
AvaII	GGWCC	4 cut(s)	589, 684, 724, 760
AxyI	CCTNAGG	1 cut(s)	1490
BamHI	GGATCC	2 cut(s)	358, 2589
BanI	GGYRCC	2 cut(s)	230, 638
BanII	GRGCYC	1 cut(s)	2566
BarI	GAAGNNNNNNTAC	2 cut(s)	2568, 2600
BauI	CACGAG	1 cut(s)	80
BbsI	GAAGAC	4 cut(s)	332, 344, 710, 1289
Bbv12I	GWGCWC	3 cut(s)	659, 2020, 2442
BbvI	GCAGC	4 cut(s)	87, 1558, 1810, 2100
BccI	CCATC	4 cut(s)	433, 715, 740, 2281
BceAI	ACGGC	7 cut(s)	88, 119, 345, 349, 467, 649, 2676
BciT130I	CCWGG	4 cut(s)	1289, 1860, 1880, 2597
BciVI	GTATCC	1 cut(s)	2457
BclI	TGATCA	2 cut(s)	1185, 1654
BcnI	CCSGG	2 cut(s)	235, 800
BcoDI	GTCTC	5 cut(s)	486, 554, 1256, 1426, 1937
BfaI	CTAG	2 cut(s)	714, 1854
BfmI	CTRYAG	3 cut(s)	204, 1457, 2316
BfoI	RGCGCY	4 cut(s)	135, 189, 234, 642
BfuAI	ACCTGC	1 cut(s)	672
BfuI	GTATCC	1 cut(s)	2457
Bme1390I	CCNGG	6 cut(s)	235, 800, 1289, 1860, 1880, 2597
Bme18I	GGWCC	4 cut(s)	589, 684, 724, 760
BmeRI	GACNNNNNGTC	1 cut(s)	1929
BmeT110I	CYCGRG	1 cut(s)	731
BmgBI	CACGTC	2 cut(s)	501, 2254
BmgT120I	GGNCC	7 cut(s)	589, 684, 724, 760, 796, 1944, 2625
BmrFI	CCNGG	6 cut(s)	235, 800, 1289, 1860, 1880, 2597
BmrI	ACTGGG	1 cut(s)	1530
BmsI	GCATC	4 cut(s)	1339, 1741, 2229, 2335
BmuI	ACTGGG	1 cut(s)	1530
BpiI	GAAGAC	4 cut(s)	332, 344, 710, 1289
BpmI	CTGGAG	4 cut(s)	878, 1901, 2361, 2579
BpuEI	CTTGAG	1 cut(s)	1244
BpuMI	CCSGG	2 cut(s)	235, 800
Bsa29I	ATCGAT	1 cut(s)	2263
BsaBI	GATNNNNATC	1 cut(s)	2306
BsaHI	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
BsaI	GGTCTC	1 cut(s)	554
BsaJI	CCNNGG	9 cut(s)	70, 485, 732, 799, 1287, 1394, 1770, 2644, 2658
BsaWI	WCCGGW	2 cut(s)	41, 2332
Bse118I	RCCGGY	2 cut(s)	287, 541
Bse1I	ACTGG	8 cut(s)	105, 252, 526, 535, 895, 1525, 1749, 2447
Bse21I	CCTNAGG	1 cut(s)	1490
Bse3DI	GCAATG	3 cut(s)	132, 289, 1852
Bse8I	GATNNNNATC	1 cut(s)	2306
BseAI	TCCGGA	1 cut(s)	2332
BseBI	CCWGG	4 cut(s)	1289, 1860, 1880, 2597
BseCI	ATCGAT	1 cut(s)	2263
BseDI	CCNNGG	9 cut(s)	70, 485, 732, 799, 1287, 1394, 1770, 2644, 2658
BseGI	GGATG	7 cut(s)	795, 1050, 1354, 1426, 1753, 1780, 2499
BseJI	GATNNNNATC	1 cut(s)	2306
BseMI	GCAATG	3 cut(s)	132, 289, 1852
BseMII	CTCAG	7 cut(s)	329, 333, 617, 893, 1504, 2177, 2352
BseNI	ACTGG	8 cut(s)	105, 252, 526, 535, 895, 1525, 1749, 2447
BseRI	GAGGAG	8 cut(s)	359, 362, 365, 368, 833, 854, 1442, 2312
BseX3I	CGGCCG	1 cut(s)	452
BseXI	GCAGC	4 cut(s)	87, 1558, 1810, 2100
BseYI	CCCAGC	1 cut(s)	1466
BsgI	GTGCAG	2 cut(s)	374, 2436
Bsh1236I	CGCG	6 cut(s)	156, 221, 668, 752, 1829, 2070
Bsh1285I	CGRYCG	2 cut(s)	151, 455
BshNI	GGYRCC	2 cut(s)	230, 638
BshVI	ATCGAT	1 cut(s)	2263
BsiEI	CGRYCG	2 cut(s)	151, 455
BsiHKAI	GWGCWC	3 cut(s)	659, 2020, 2442
BsiHKCI	CYCGRG	1 cut(s)	731
BsiSI	CCGG	8 cut(s)	42, 234, 288, 294, 408, 542, 799, 2333
BslFI	GGGAC	3 cut(s)	746, 755, 1528
BsmAI	GTCTC	5 cut(s)	486, 554, 1256, 1426, 1937
BsmFI	GGGAC	3 cut(s)	746, 755, 1528
BsmI	GAATGC	1 cut(s)	1468
Bso31I	GGTCTC	1 cut(s)	554
BsoBI	CYCGRG	1 cut(s)	731
Bsp1286I	GDGCHC	4 cut(s)	659, 2020, 2442, 2566
Bsp13I	TCCGGA	1 cut(s)	2332
BspCNI	CTCAG	7 cut(s)	328, 334, 618, 894, 1503, 2176, 2351
BspDI	ATCGAT	1 cut(s)	2263
BspEI	TCCGGA	1 cut(s)	2332
BspFNI	CGCG	6 cut(s)	156, 221, 668, 752, 1829, 2070
BspMI	ACCTGC	1 cut(s)	672
BspPI	GGATC	8 cut(s)	111, 353, 366, 1127, 1366, 1652, 2584, 2597
BspT107I	GGYRCC	2 cut(s)	230, 638
BspTNI	GGTCTC	1 cut(s)	554
BsrDI	GCAATG	3 cut(s)	132, 289, 1852
BsrFI	RCCGGY	2 cut(s)	287, 541
BsrI	ACTGG	8 cut(s)	105, 252, 526, 535, 895, 1525, 1749, 2447
BssAI	RCCGGY	2 cut(s)	287, 541
BssECI	CCNNGG	9 cut(s)	70, 485, 732, 799, 1287, 1394, 1770, 2644, 2658
BssNI	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
BssSI	CACGAG	1 cut(s)	80
BssT1I	CCWWGG	2 cut(s)	1394, 1770
Bst2BI	CACGAG	1 cut(s)	80
Bst2UI	CCWGG	4 cut(s)	1289, 1860, 1880, 2597
Bst4CI	ACNGT	4 cut(s)	1142, 1383, 2209, 2320
Bst6I	CTCTTC	5 cut(s)	1088, 1419, 1589, 1697, 2571
BstACI	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
BstAPI	GCANNNNNTGC	3 cut(s)	463, 1180, 1823
BstC8I	GCNNGC	7 cut(s)	123, 289, 474, 543, 934, 1305, 2651
BstDEI	CTNAG	9 cut(s)	315, 342, 626, 902, 1490, 1794, 2163, 2327, 2338
BstDSI	CCRYGG	3 cut(s)	70, 2644, 2658
BstF5I	GGATG	7 cut(s)	795, 1050, 1354, 1426, 1753, 1780, 2499
BstFNI	CGCG	6 cut(s)	156, 221, 668, 752, 1829, 2070
BstH2I	RGCGCY	4 cut(s)	135, 189, 234, 642
BstHHI	GCGC	8 cut(s)	134, 188, 233, 585, 641, 752, 883, 1354
BstMAI	GTCTC	5 cut(s)	486, 554, 1256, 1426, 1937
BstMCI	CGRYCG	2 cut(s)	151, 455
BstNI	CCWGG	4 cut(s)	1289, 1860, 1880, 2597
BstNSI	RCATGY	2 cut(s)	1606, 2653
BstSCI	CCNGG	6 cut(s)	233, 798, 1287, 1858, 1878, 2595
BstSFI	CTRYAG	3 cut(s)	204, 1457, 2316
BstUI	CGCG	6 cut(s)	156, 221, 668, 752, 1829, 2070
BstV1I	GCAGC	4 cut(s)	87, 1558, 1810, 2100
BstV2I	GAAGAC	4 cut(s)	332, 344, 710, 1289
BstX2I	RGATCY	2 cut(s)	358, 2589
BstXI	CCANNNNNNTGG	1 cut(s)	100
BstYI	RGATCY	2 cut(s)	358, 2589
BstZI	CGGCCG	1 cut(s)	452
Bsu15I	ATCGAT	1 cut(s)	2263
Bsu36I	CCTNAGG	1 cut(s)	1490
BsuI	GTATCC	1 cut(s)	2457
BsuTUI	ATCGAT	1 cut(s)	2263
BtgI	CCRYGG	3 cut(s)	70, 2644, 2658
BtrI	CACGTC	2 cut(s)	501, 2254
BtsCI	GGATG	7 cut(s)	795, 1050, 1354, 1426, 1753, 1780, 2499
BtsIMutI	CAGTG	4 cut(s)	902, 1379, 1742, 2440
BveI	ACCTGC	1 cut(s)	672
Cac8I	GCNNGC	7 cut(s)	123, 289, 474, 543, 934, 1305, 2651
CaiI	CAGNNNCTG	2 cut(s)	901, 1759
CfoI	GCGC	8 cut(s)	134, 188, 233, 585, 641, 752, 883, 1354
Cfr10I	RCCGGY	2 cut(s)	287, 541
Cfr13I	GGNCC	7 cut(s)	589, 684, 724, 760, 796, 1944, 2625
ClaI	ATCGAT	1 cut(s)	2263
CseI	GACGC	3 cut(s)	534, 657, 2076
Csp6I	GTAC	2 cut(s)	859, 2585
CviAII	CATG	8 cut(s)	427, 1319, 1603, 1900, 1927, 2199, 2539, 2650
CviQI	GTAC	2 cut(s)	859, 2585
DdeI	CTNAG	9 cut(s)	315, 342, 626, 902, 1490, 1794, 2163, 2327, 2338
DinI	GGCGCC	2 cut(s)	232, 640
DraI	TTTAAA	1 cut(s)	1920
DrdI	GACNNNNNNGTC	1 cut(s)	2639
DriI	GACNNNNNGTC	1 cut(s)	1929
DseDI	GACNNNNNNGTC	1 cut(s)	2639
EaeI	YGGCCR	3 cut(s)	441, 452, 2661
EagI	CGGCCG	1 cut(s)	452
Eam1104I	CTCTTC	5 cut(s)	1088, 1419, 1589, 1697, 2571
Eam1105I	GACNNNNNGTC	1 cut(s)	1929
EarI	CTCTTC	5 cut(s)	1088, 1419, 1589, 1697, 2571
EciI	GGCGGA	3 cut(s)	351, 491, 819
EclXI	CGGCCG	1 cut(s)	452
Eco130I	CCWWGG	2 cut(s)	1394, 1770
Eco147I	AGGCCT	1 cut(s)	1858
Eco24I	GRGCYC	1 cut(s)	2566
Eco31I	GGTCTC	1 cut(s)	554
Eco47I	GGWCC	4 cut(s)	589, 684, 724, 760
Eco52I	CGGCCG	1 cut(s)	452
Eco57I	CTGAAG	1 cut(s)	722
Eco81I	CCTNAGG	1 cut(s)	1490
Eco88I	CYCGRG	1 cut(s)	731
EcoO109I	RGGNCCY	3 cut(s)	589, 760, 1944
EcoRII	CCWGG	4 cut(s)	1287, 1858, 1878, 2595
EcoT14I	CCWWGG	2 cut(s)	1394, 1770
EcoT38I	GRGCYC	1 cut(s)	2566
EgeI	GGCGCC	2 cut(s)	232, 640
EheI	GGCGCC	2 cut(s)	232, 640
ErhI	CCWWGG	2 cut(s)	1394, 1770
FaeI	CATG	8 cut(s)	430, 1322, 1606, 1903, 1930, 2202, 2542, 2653
FalI	AAGNNNNNCTT	6 cut(s)	8, 40, 1230, 1262, 2195, 2227
FaqI	GGGAC	3 cut(s)	746, 755, 1528
FatI	CATG	8 cut(s)	426, 1318, 1602, 1899, 1926, 2198, 2538, 2649
FauI	CCCGC	4 cut(s)	226, 290, 735, 745
FbaI	TGATCA	2 cut(s)	1185, 1654
FblI	GTMKAC	1 cut(s)	622
FokI	GGATG	7 cut(s)	802, 1057, 1361, 1433, 1760, 1787, 2506
FriOI	GRGCYC	1 cut(s)	2566
FspBI	CTAG	2 cut(s)	714, 1854
GlaI	GCGC	8 cut(s)	133, 187, 232, 584, 640, 751, 882, 1353
GsaI	CCCAGC	1 cut(s)	1470
GsuI	CTGGAG	4 cut(s)	878, 1901, 2361, 2579
HaeII	RGCGCY	4 cut(s)	135, 189, 234, 642
HapII	CCGG	8 cut(s)	42, 234, 288, 294, 408, 542, 799, 2333
HgaI	GACGC	3 cut(s)	534, 657, 2076
HhaI	GCGC	8 cut(s)	134, 188, 233, 585, 641, 752, 883, 1354
Hin1I	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
Hin1II	CATG	8 cut(s)	430, 1322, 1606, 1903, 1930, 2202, 2542, 2653
Hin6I	GCGC	8 cut(s)	132, 186, 231, 583, 639, 750, 881, 1352
HinP1I	GCGC	8 cut(s)	132, 186, 231, 583, 639, 750, 881, 1352
HincII	GTYRAC	1 cut(s)	623
HindII	GTYRAC	1 cut(s)	623
HpaII	CCGG	8 cut(s)	42, 234, 288, 294, 408, 542, 799, 2333
HphI	GGTGA	7 cut(s)	98, 821, 1291, 1793, 1799, 2065, 2125
Hpy166II	GTNNAC	4 cut(s)	47, 623, 2056, 2077
Hpy188I	TCNGA	8 cut(s)	318, 486, 550, 688, 1137, 1341, 1951, 2286
Hpy8I	GTNNAC	4 cut(s)	47, 623, 2056, 2077
HpyAV	CCTTC	9 cut(s)	34, 262, 1186, 1195, 1518, 1519, 1934, 2270, 2428
HpyCH4III	ACNGT	4 cut(s)	1142, 1383, 2209, 2320
HpyCH4IV	ACGT	7 cut(s)	500, 552, 610, 645, 2079, 2253, 2640
HpyF3I	CTNAG	9 cut(s)	315, 342, 626, 902, 1490, 1794, 2163, 2327, 2338
HpySE526I	ACGT	7 cut(s)	500, 552, 610, 645, 2079, 2253, 2640
Hsp92I	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
Hsp92II	CATG	8 cut(s)	430, 1322, 1606, 1903, 1930, 2202, 2542, 2653
HspAI	GCGC	8 cut(s)	132, 186, 231, 583, 639, 750, 881, 1352
KasI	GGCGCC	2 cut(s)	230, 638
KflI	GGGWCCC	1 cut(s)	760
Kpn2I	TCCGGA	1 cut(s)	2332
KroI	GCCGGC	2 cut(s)	287, 541
KroNI	GCCGGC	2 cut(s)	289, 543
Ksp22I	TGATCA	2 cut(s)	1185, 1654
LmnI	GCTCC	8 cut(s)	44, 93, 279, 296, 897, 1868, 2437, 2599
Lsp1109I	GCAGC	4 cut(s)	87, 1558, 1810, 2100
LweI	GCATC	4 cut(s)	1339, 1741, 2229, 2335
MaeI	CTAG	2 cut(s)	714, 1854
MaeII	ACGT	7 cut(s)	500, 552, 610, 645, 2079, 2253, 2640
MaeIII	GTNAC	7 cut(s)	629, 809, 1231, 2131, 2192, 2417, 2514
MfeI	CAATTG	2 cut(s)	1650, 1996
MflI	RGATCY	2 cut(s)	358, 2589
MhlI	GDGCHC	4 cut(s)	659, 2020, 2442, 2566
MluCI	AATT	9 cut(s)	977, 1053, 1650, 1984, 1996, 2103, 2271, 2483, 2683
MluI	ACGCGT	2 cut(s)	666, 2068
Mly113I	GGCGCC	2 cut(s)	231, 639
MlyI	GAGTC	8 cut(s)	257, 407, 488, 575, 880, 1939, 2023, 2330
MmeI	TCCRAC	2 cut(s)	528, 1022
MreI	CGCCGGCG	1 cut(s)	541
MroI	TCCGGA	1 cut(s)	2332
MroNI	GCCGGC	2 cut(s)	287, 541
MroXI	GAANNNNTTC	2 cut(s)	23, 2280
MseI	TTAA	6 cut(s)	675, 1359, 1919, 2312, 2468, 2486
MspA1I	CMGCKG	2 cut(s)	472, 2051
MspI	CCGG	8 cut(s)	42, 234, 288, 294, 408, 542, 799, 2333
MspR9I	CCNGG	6 cut(s)	235, 800, 1289, 1860, 1880, 2597
MunI	CAATTG	2 cut(s)	1650, 1996
Mva1269I	GAATGC	1 cut(s)	1468
MvaI	CCWGG	4 cut(s)	1289, 1860, 1880, 2597
MvnI	CGCG	6 cut(s)	156, 221, 668, 752, 1829, 2070
NaeI	GCCGGC	2 cut(s)	289, 543
NarI	GGCGCC	2 cut(s)	231, 639
NciI	CCSGG	2 cut(s)	235, 800
NgoMIV	GCCGGC	2 cut(s)	287, 541
NlaIII	CATG	8 cut(s)	430, 1322, 1606, 1903, 1930, 2202, 2542, 2653
NmeAIII	GCCGAG	2 cut(s)	469, 583
NmuCI	GTSAC	5 cut(s)	629, 809, 1231, 2131, 2514
NspI	RCATGY	2 cut(s)	1606, 2653
PaeI	GCATGC	1 cut(s)	2653
PceI	AGGCCT	1 cut(s)	1858
PctI	GAATGC	1 cut(s)	1468
PdiI	GCCGGC	2 cut(s)	289, 543
PdmI	GAANNNNTTC	2 cut(s)	23, 2280
PfeI	GAWTC	7 cut(s)	140, 967, 1218, 1342, 1756, 1763, 1962
PflFI	GACNNNGTC	2 cut(s)	565, 709
PflMI	CCANNNNNTGG	1 cut(s)	2539
PfoI	TCCNGGA	1 cut(s)	2595
PleI	GAGTC	8 cut(s)	256, 407, 487, 574, 880, 1938, 2023, 2330
PluTI	GGCGCC	2 cut(s)	234, 642
PpsI	GAGTC	8 cut(s)	256, 407, 487, 574, 880, 1938, 2023, 2330
PpuMI	RGGWCCY	2 cut(s)	589, 760
PsiI	TTATAA	1 cut(s)	2102
Psp5II	RGGWCCY	2 cut(s)	589, 760
Psp6I	CCWGG	4 cut(s)	1287, 1858, 1878, 2595
PspFI	CCCAGC	1 cut(s)	1466
PspGI	CCWGG	4 cut(s)	1287, 1858, 1878, 2595
PspPI	GGNCC	7 cut(s)	589, 684, 724, 760, 796, 1944, 2625
PspPPI	RGGWCCY	2 cut(s)	589, 760
PstNI	CAGNNNCTG	2 cut(s)	901, 1759
PsuI	RGATCY	2 cut(s)	358, 2589
PsyI	GACNNNGTC	2 cut(s)	565, 709
RsaI	GTAC	2 cut(s)	860, 2586
RsaNI	GTAC	2 cut(s)	859, 2585
SalI	GTCGAC	1 cut(s)	621
SaqAI	TTAA	6 cut(s)	675, 1359, 1919, 2312, 2468, 2486
Sau96I	GGNCC	7 cut(s)	589, 684, 724, 760, 796, 1944, 2625
SchI	GAGTC	8 cut(s)	257, 407, 488, 575, 880, 1939, 2023, 2330
ScrFI	CCNGG	6 cut(s)	235, 800, 1289, 1860, 1880, 2597
SduI	GDGCHC	4 cut(s)	659, 2020, 2442, 2566
SfaNI	GCATC	4 cut(s)	1339, 1741, 2229, 2335
SfcI	CTRYAG	3 cut(s)	204, 1457, 2316
SfoI	GGCGCC	2 cut(s)	232, 640
SgrAI	CRCCGGYG	1 cut(s)	541
SinI	GGWCC	4 cut(s)	589, 684, 724, 760
SmlI	CTYRAG	2 cut(s)	14, 1223
SmoI	CTYRAG	2 cut(s)	14, 1223
SphI	GCATGC	1 cut(s)	2653
Sse9I	AATT	9 cut(s)	977, 1053, 1650, 1984, 1996, 2103, 2271, 2483, 2683
SseBI	AGGCCT	1 cut(s)	1858
SspDI	GGCGCC	2 cut(s)	230, 638
SspI	AATATT	1 cut(s)	2146
SspMI	CTAG	2 cut(s)	714, 1854
StuI	AGGCCT	1 cut(s)	1858
StyD4I	CCNGG	6 cut(s)	233, 798, 1287, 1858, 1878, 2595
StyI	CCWWGG	2 cut(s)	1394, 1770
TaaI	ACNGT	4 cut(s)	1142, 1383, 2209, 2320
TaiI	ACGT	7 cut(s)	503, 555, 613, 648, 2082, 2256, 2643
TaqI	TCGA	9 cut(s)	138, 174, 368, 503, 622, 662, 1016, 2065, 2263
TaqII	GACCGA	1 cut(s)	578
TasI	AATT	9 cut(s)	977, 1053, 1650, 1984, 1996, 2103, 2271, 2483, 2683
TatI	WGTACW	1 cut(s)	858
TfiI	GAWTC	7 cut(s)	140, 967, 1218, 1342, 1756, 1763, 1962
Tru1I	TTAA	6 cut(s)	675, 1359, 1919, 2312, 2468, 2486
Tru9I	TTAA	6 cut(s)	675, 1359, 1919, 2312, 2468, 2486
TscAI	CASTG	4 cut(s)	902, 1386, 1749, 2447
TseFI	GTSAC	5 cut(s)	629, 809, 1231, 2131, 2514
TseI	GCWGC	4 cut(s)	75, 1571, 1823, 2113
Tsp45I	GTSAC	5 cut(s)	629, 809, 1231, 2131, 2514
TspGWI	ACGGA	3 cut(s)	2026, 2602, 2633
TspRI	CASTG	4 cut(s)	902, 1386, 1749, 2447
Tth111I	GACNNNGTC	2 cut(s)	565, 709
Van91I	CCANNNNNTGG	1 cut(s)	2539
VpaK11BI	GGWCC	4 cut(s)	589, 684, 724, 760
XbaI	TCTAGA	1 cut(s)	713
XceI	RCATGY	2 cut(s)	1606, 2653
XmiI	GTMKAC	1 cut(s)	622
XmnI	GAANNNNTTC	2 cut(s)	23, 2280
XspI	CTAG	2 cut(s)	714, 1854
ZraI	GACGTC	3 cut(s)	553, 611, 646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.