Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0001376

Physical Location & Seq

Genomic Coordinates Reverse (-)

41539936 .. 41545400

Gene Structure 5465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG231300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGATTTCTCACTCAAGAAATCCTTCAAATCTCTTGGCTCCGGTAAACACATCTCTGCCGAAGCAGACCACGGCAGCCACGAGAAGCTCCCCATTCTACTGGATCACCACAACGAACAGCACGCAATGAGCGCCGTCGATTCCTACGACCGCCGCGAGGTCATCGTCAAGATCGACGAGGGCGGCGCTTCCTCCACCACCACTACAGAAGCCGACCCCGCGAAACGCGGCGCCGGGATTTGGAGGGAGTCCAGTATTGATTTCTGGAAGGACGACGGGAGCAATGCCGGCTCCGGCGGGGGTTTTGAGTTTGCTCAGAAGAAGAAGACGGCGGCGAAGACTGAGGAGGAGGAGGAGGATCCGCCGTCGAAGCTGATAGGGAGGTTCCTGCACAAGCAGAGAGCCTCCGGCGACTCGTCGTTGGACATGGATTTGGAGATGGCCGAGCTACGGCCGCAGGATTTGCCGCCGCTGGCGGAGTCTCCGAGGAACTCACGCACGTCGAGGGAGATCAAGGTGTCGTTCCAGTCGTTCCAGTCGCCGGCGTCGGACGTCGCCGAGACCGAGTCTGTTCGGCGGCGGCGCAAGGACCCCGACGACGGGGAACGACGTCGTAGCAGTCGACTGAGTGACGGCGGCGCCGACGTCGTTAGGTGCTCGTCGAACGCGTCGTTTAAGAGCAGGTCCGATTTGTTGAGGCTGAAGACGAGGTCTAGATTGATGGACCCGCCCGAGGGGTGGGACGATGGCGCGGGTCGGGTCCCGAAATCGGGTATGATGAGGTCTGGGATGTTGGGCCGGGGCGGAGGTGACGATGAGGAGGACGACCCGTTTTTGGAGGAGGATTTGCCTGATGAGTACAAGAGGGCGAAGTTCAATGCGCTGACTCTGCTCCAGTGGCTGAGTTTGGTTTTGATTATTGGGGCATTGGCTTGCACTCTTTCTATAAGAGTTTTGAGGGAGATGAATCTGTGGAAATTGAAGCTGTGGAAATGGGAGGTGCTGATTTTGGTTTCGATTTGTGGGAGGCTGGTTTCAGGTTGGATGATAAAAATTATGGTGTTCTTTGTGGAGAGGAACTTCATTTTGAGGAAGAGGGTGTTGTATTTTGTTTATGGGATCAGGAAGCCTGTTCAGAACTGTATTTGGCTTGGCCTTGTTTTGACGGGTTGGCATTTCTTGCTGATCAGGAAGGTTGAGAAGGAAACCAATGGTAGAATCCTTGAGTATGTGACTAAAGTGTTGCTTTGTCTCTTGATTGGGGGTTTGATTTGGTTGGTGAAGACCCTGGTTGTAAAAGTGCTTGCTTCGTCTTTCCATGTTAGATCGTATTTTGATCGGATTCAGGATGCGCTTTTTAATCAGTATGTGATCCAAACACTGTCGGGGCGGCCTTGGATTGAGATAAAAAATGCAGAGGATGAAGAGGAGAGACTTGCTGATGAGGTTAGGAAGCTACAGAATGCTGGGGCTAATATGCCTCCTGACCTCAGGGCAAGTGCATTTCCTTCTGGGACAACTGGGAAGGCGGTTGGGAATGGCGGCTCTGGTAGAAGTGGGCGGTTGATTGCTGCAAGTGGAGGGCTTGTGGGGAAGAGTGGCATGTTTTCAAAGCCACTTTCCAAGAAGTCAGGGGAGGTTGGGATCACAATTGATCACTTGCATAGGCTCAATCCAAAGAATGTGTCTGCTTGGAATATGAAGAGGCTAATGAATATAGTAAAATATGGGCATCTTACCACACTGGATGAGCAGATTCTGGATTCAACCAAGGATGAGGGTGAGGGTGATACTAAGATCAAAAGTGAAGTTGAGGCAAAGGCTGCCGCGAAAAAGATATTTCGCAATGTGGCTAGGCCTGGCTCCAAGTATGTTTCCATTTATTCCCTTTTGGTTTGTGTGCATTTATCTGCGTTCTTAACTTGGCTCGACTGTGTTATGTTGTTCATATCTGTTTCTTTCATTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008381 GO:0009506 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0030054 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

656

Amino Acids

73.26

Weight (kDa)

9.01

Isoelectric Point (pI)

47.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78610 AT2G17010 AT2G17010
fragaria_vesca	FvH4_2g15780 FvH4_2g37870 FvH4_2g37870 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430
malus_domestica	MD05G1126700.v1.1 MD08G1006800.v1.1 MD08G1006900.v1.1 MD10G1129900.v1.1
prunus_persica	Prupe.1G358700_v2.0.a1 Prupe.8G170400_v2.0.a1
pyrus_communis	pycom05g12260 pycom08g00530 pycom08g00560 pycom08g00580
rosa_chinensis	RchiOBHm_Chr5g0071021 RchiOBHm_Chr6g0279131 RchiOBHm_Chr6g0303751
rosa_laevigata	RLG00000011049 RLG00000013165 RLG00000036184
rosa_multiflora	Rmu_co8207138.1_g000001 Rmu_co8395065.1_g000001 Rmu_sc0001141.1_g000023 Rmu_sc0012878.1_g000006 Rmu_sc0014203.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010020 Rroxscaffold_7G00164430 Rroxscaffold_7G00189100
rosa_rugosa	Rorug05G0409800 Rorug05G0409900 Rorug05G0410000 Rorug06G0122500 Rorug06G0324500
rosa_samantha	Rh5AG466100 Rh5BG484300 Rh5CG508900 Rh5DG495700 Rh6AG231300 Rh6AG438800 Rh6BG236200 Rh6BG464300 Rh6CG238200 Rh6CG451100 Rh6DG229800 Rh6DG438000
rosa_wichuraiana	Rw5G043280 Rw6G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	555, 613, 648
Acc36I	ACCTGC	1 cut(s)	672
AccB1I	GGYRCC	2 cut(s)	230, 638
AccI	GTMKAC	1 cut(s)	622
AccII	CGCG	6 cut(s)	156, 221, 228, 668, 752, 1829
AclWI	GGATC	6 cut(s)	111, 353, 366, 1127, 1366, 1652
AcoI	YGGCCR	2 cut(s)	441, 452
AcuI	CTGAAG	1 cut(s)	722
AcyI	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
AfaI	GTAC	1 cut(s)	860
AflIII	ACRYGT	1 cut(s)	666
AgsI	TTSAA	5 cut(s)	28, 877, 982, 1611, 1767
AjiI	CACGTC	1 cut(s)	501
AjnI	CCWGG	2 cut(s)	1287, 1858
AluBI	AGCT	5 cut(s)	88, 373, 448, 985, 1456
AluI	AGCT	5 cut(s)	88, 373, 448, 985, 1456
Alw21I	GWGCWC	1 cut(s)	659
Alw26I	GTCTC	4 cut(s)	486, 554, 1256, 1426
AlwI	GGATC	6 cut(s)	111, 353, 366, 1127, 1366, 1652
AlwNI	CAGNNNCTG	2 cut(s)	901, 1759
Ama87I	CYCGRG	1 cut(s)	731
AoxI	GGCC	6 cut(s)	441, 452, 796, 1153, 1391, 1856
ApeKI	GCWGC	3 cut(s)	75, 1571, 1823
ArsI	GACNNNNNNTTYG	2 cut(s)	1670, 1702
Asp700I	GAANNNNTTC	1 cut(s)	23
AspLEI	GCGC	8 cut(s)	134, 188, 233, 585, 641, 752, 883, 1354
AspS9I	GGNCC	5 cut(s)	589, 684, 724, 760, 796
AsuC2I	CCSGG	2 cut(s)	235, 800
AsuHPI	GGTGA	5 cut(s)	98, 821, 1291, 1793, 1799
AvaI	CYCGRG	1 cut(s)	731
AvaII	GGWCC	4 cut(s)	589, 684, 724, 760
AxyI	CCTNAGG	1 cut(s)	1490
BamHI	GGATCC	1 cut(s)	358
BanI	GGYRCC	2 cut(s)	230, 638
BauI	CACGAG	1 cut(s)	80
BbsI	GAAGAC	4 cut(s)	332, 344, 710, 1289
Bbv12I	GWGCWC	1 cut(s)	659
BbvI	GCAGC	3 cut(s)	87, 1558, 1810
BccI	CCATC	3 cut(s)	433, 715, 740
BceAI	ACGGC	6 cut(s)	88, 119, 345, 349, 467, 649
BciT130I	CCWGG	2 cut(s)	1289, 1860
BclI	TGATCA	2 cut(s)	1185, 1654
BcnI	CCSGG	2 cut(s)	235, 800
BcoDI	GTCTC	4 cut(s)	486, 554, 1256, 1426
BfaI	CTAG	2 cut(s)	714, 1854
BfmI	CTRYAG	2 cut(s)	204, 1457
BfoI	RGCGCY	4 cut(s)	135, 189, 234, 642
BfuAI	ACCTGC	1 cut(s)	672
Bme1390I	CCNGG	4 cut(s)	235, 800, 1289, 1860
Bme18I	GGWCC	4 cut(s)	589, 684, 724, 760
BmeT110I	CYCGRG	1 cut(s)	731
BmgBI	CACGTC	1 cut(s)	501
BmgT120I	GGNCC	5 cut(s)	589, 684, 724, 760, 796
BmrFI	CCNGG	4 cut(s)	235, 800, 1289, 1860
BmrI	ACTGGG	1 cut(s)	1530
BmsI	GCATC	2 cut(s)	1339, 1741
BmuI	ACTGGG	1 cut(s)	1530
BpiI	GAAGAC	4 cut(s)	332, 344, 710, 1289
BpmI	CTGGAG	1 cut(s)	878
BpuEI	CTTGAG	1 cut(s)	1244
BpuMI	CCSGG	2 cut(s)	235, 800
BsaHI	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
BsaI	GGTCTC	1 cut(s)	554
BsaJI	CCNNGG	7 cut(s)	70, 485, 732, 799, 1287, 1394, 1770
BsaWI	WCCGGW	1 cut(s)	41
BsaXI	ACNNNNNCTCC	2 cut(s)	1572, 1602
Bse118I	RCCGGY	2 cut(s)	287, 541
Bse1I	ACTGG	7 cut(s)	105, 252, 526, 535, 895, 1525, 1749
Bse21I	CCTNAGG	1 cut(s)	1490
Bse3DI	GCAATG	3 cut(s)	132, 289, 1852
BseBI	CCWGG	2 cut(s)	1289, 1860
BseDI	CCNNGG	7 cut(s)	70, 485, 732, 799, 1287, 1394, 1770
BseGI	GGATG	6 cut(s)	795, 1050, 1354, 1426, 1753, 1780
BseMI	GCAATG	3 cut(s)	132, 289, 1852
BseMII	CTCAG	5 cut(s)	329, 333, 617, 893, 1504
BseNI	ACTGG	7 cut(s)	105, 252, 526, 535, 895, 1525, 1749
BseRI	GAGGAG	7 cut(s)	359, 362, 365, 368, 833, 854, 1442
BseX3I	CGGCCG	1 cut(s)	452
BseXI	GCAGC	3 cut(s)	87, 1558, 1810
BseYI	CCCAGC	1 cut(s)	1466
BsgI	GTGCAG	1 cut(s)	374
Bsh1236I	CGCG	6 cut(s)	156, 221, 228, 668, 752, 1829
Bsh1285I	CGRYCG	2 cut(s)	151, 455
BshFI	GGCC	6 cut(s)	443, 454, 798, 1155, 1393, 1858
BshNI	GGYRCC	2 cut(s)	230, 638
BsiEI	CGRYCG	2 cut(s)	151, 455
BsiHKAI	GWGCWC	1 cut(s)	659
BsiHKCI	CYCGRG	1 cut(s)	731
BsiSI	CCGG	7 cut(s)	42, 234, 288, 294, 408, 542, 799
BslFI	GGGAC	3 cut(s)	746, 755, 1528
BsmAI	GTCTC	4 cut(s)	486, 554, 1256, 1426
BsmFI	GGGAC	3 cut(s)	746, 755, 1528
BsmI	GAATGC	1 cut(s)	1468
BsnI	GGCC	6 cut(s)	443, 454, 798, 1155, 1393, 1858
Bso31I	GGTCTC	1 cut(s)	554
BsoBI	CYCGRG	1 cut(s)	731
Bsp1286I	GDGCHC	1 cut(s)	659
BspANI	GGCC	6 cut(s)	443, 454, 798, 1155, 1393, 1858
BspCNI	CTCAG	5 cut(s)	328, 334, 618, 894, 1503
BspFNI	CGCG	6 cut(s)	156, 221, 228, 668, 752, 1829
BspMI	ACCTGC	1 cut(s)	672
BspPI	GGATC	6 cut(s)	111, 353, 366, 1127, 1366, 1652
BspT107I	GGYRCC	2 cut(s)	230, 638
BspTNI	GGTCTC	1 cut(s)	554
BsrDI	GCAATG	3 cut(s)	132, 289, 1852
BsrFI	RCCGGY	2 cut(s)	287, 541
BsrI	ACTGG	7 cut(s)	105, 252, 526, 535, 895, 1525, 1749
BssAI	RCCGGY	2 cut(s)	287, 541
BssECI	CCNNGG	7 cut(s)	70, 485, 732, 799, 1287, 1394, 1770
BssNI	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
BssSI	CACGAG	1 cut(s)	80
BssT1I	CCWWGG	2 cut(s)	1394, 1770
Bst2BI	CACGAG	1 cut(s)	80
Bst2UI	CCWGG	2 cut(s)	1289, 1860
Bst4CI	ACNGT	3 cut(s)	1142, 1383, 1934
Bst6I	CTCTTC	4 cut(s)	1088, 1419, 1589, 1697
BstACI	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
BstAPI	GCANNNNNTGC	3 cut(s)	463, 1180, 1823
BstC8I	GCNNGC	6 cut(s)	123, 289, 474, 543, 934, 1305
BstDEI	CTNAG	6 cut(s)	315, 342, 626, 902, 1490, 1794
BstDSI	CCRYGG	1 cut(s)	70
BstF5I	GGATG	6 cut(s)	795, 1050, 1354, 1426, 1753, 1780
BstFNI	CGCG	6 cut(s)	156, 221, 228, 668, 752, 1829
BstH2I	RGCGCY	4 cut(s)	135, 189, 234, 642
BstHHI	GCGC	8 cut(s)	134, 188, 233, 585, 641, 752, 883, 1354
BstMAI	GTCTC	4 cut(s)	486, 554, 1256, 1426
BstMCI	CGRYCG	2 cut(s)	151, 455
BstNI	CCWGG	2 cut(s)	1289, 1860
BstNSI	RCATGY	1 cut(s)	1606
BstSCI	CCNGG	4 cut(s)	233, 798, 1287, 1858
BstSFI	CTRYAG	2 cut(s)	204, 1457
BstUI	CGCG	6 cut(s)	156, 221, 228, 668, 752, 1829
BstV1I	GCAGC	3 cut(s)	87, 1558, 1810
BstV2I	GAAGAC	4 cut(s)	332, 344, 710, 1289
BstX2I	RGATCY	1 cut(s)	358
BstXI	CCANNNNNNTGG	1 cut(s)	100
BstYI	RGATCY	1 cut(s)	358
BstZI	CGGCCG	1 cut(s)	452
Bsu36I	CCTNAGG	1 cut(s)	1490
BsuRI	GGCC	6 cut(s)	443, 454, 798, 1155, 1393, 1858
BtgI	CCRYGG	1 cut(s)	70
BtrI	CACGTC	1 cut(s)	501
BtsCI	GGATG	6 cut(s)	795, 1050, 1354, 1426, 1753, 1780
BtsIMutI	CAGTG	3 cut(s)	902, 1379, 1742
BveI	ACCTGC	1 cut(s)	672
Cac8I	GCNNGC	6 cut(s)	123, 289, 474, 543, 934, 1305
CaiI	CAGNNNCTG	2 cut(s)	901, 1759
CfoI	GCGC	8 cut(s)	134, 188, 233, 585, 641, 752, 883, 1354
Cfr10I	RCCGGY	2 cut(s)	287, 541
Cfr13I	GGNCC	5 cut(s)	589, 684, 724, 760, 796
CseI	GACGC	2 cut(s)	534, 657
Csp6I	GTAC	1 cut(s)	859
CviAII	CATG	3 cut(s)	427, 1319, 1603
CviQI	GTAC	1 cut(s)	859
DdeI	CTNAG	6 cut(s)	315, 342, 626, 902, 1490, 1794
DinI	GGCGCC	2 cut(s)	232, 640
EaeI	YGGCCR	2 cut(s)	441, 452
EagI	CGGCCG	1 cut(s)	452
Eam1104I	CTCTTC	4 cut(s)	1088, 1419, 1589, 1697
EarI	CTCTTC	4 cut(s)	1088, 1419, 1589, 1697
EciI	GGCGGA	3 cut(s)	351, 491, 819
EclXI	CGGCCG	1 cut(s)	452
Eco130I	CCWWGG	2 cut(s)	1394, 1770
Eco147I	AGGCCT	1 cut(s)	1858
Eco31I	GGTCTC	1 cut(s)	554
Eco47I	GGWCC	4 cut(s)	589, 684, 724, 760
Eco52I	CGGCCG	1 cut(s)	452
Eco57I	CTGAAG	1 cut(s)	722
Eco81I	CCTNAGG	1 cut(s)	1490
Eco88I	CYCGRG	1 cut(s)	731
EcoO109I	RGGNCCY	2 cut(s)	589, 760
EcoRII	CCWGG	2 cut(s)	1287, 1858
EcoT14I	CCWWGG	2 cut(s)	1394, 1770
EgeI	GGCGCC	2 cut(s)	232, 640
EheI	GGCGCC	2 cut(s)	232, 640
ErhI	CCWWGG	2 cut(s)	1394, 1770
FaeI	CATG	3 cut(s)	430, 1322, 1606
FalI	AAGNNNNNCTT	4 cut(s)	8, 40, 1230, 1262
FaqI	GGGAC	3 cut(s)	746, 755, 1528
FatI	CATG	3 cut(s)	426, 1318, 1602
FauI	CCCGC	4 cut(s)	226, 290, 735, 745
FbaI	TGATCA	2 cut(s)	1185, 1654
FblI	GTMKAC	1 cut(s)	622
FokI	GGATG	6 cut(s)	802, 1057, 1361, 1433, 1760, 1787
FspBI	CTAG	2 cut(s)	714, 1854
GlaI	GCGC	8 cut(s)	133, 187, 232, 584, 640, 751, 882, 1353
GsaI	CCCAGC	1 cut(s)	1470
GsuI	CTGGAG	1 cut(s)	878
HaeII	RGCGCY	4 cut(s)	135, 189, 234, 642
HaeIII	GGCC	6 cut(s)	443, 454, 798, 1155, 1393, 1858
HapII	CCGG	7 cut(s)	42, 234, 288, 294, 408, 542, 799
HgaI	GACGC	2 cut(s)	534, 657
HhaI	GCGC	8 cut(s)	134, 188, 233, 585, 641, 752, 883, 1354
Hin1I	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
Hin1II	CATG	3 cut(s)	430, 1322, 1606
Hin6I	GCGC	8 cut(s)	132, 186, 231, 583, 639, 750, 881, 1352
HinP1I	GCGC	8 cut(s)	132, 186, 231, 583, 639, 750, 881, 1352
HincII	GTYRAC	1 cut(s)	623
HindII	GTYRAC	1 cut(s)	623
HpaII	CCGG	7 cut(s)	42, 234, 288, 294, 408, 542, 799
HphI	GGTGA	5 cut(s)	98, 821, 1291, 1793, 1799
Hpy166II	GTNNAC	2 cut(s)	47, 623
Hpy188I	TCNGA	6 cut(s)	318, 486, 550, 688, 1137, 1341
Hpy8I	GTNNAC	2 cut(s)	47, 623
HpyAV	CCTTC	6 cut(s)	34, 262, 1186, 1195, 1518, 1519
HpyCH4III	ACNGT	3 cut(s)	1142, 1383, 1934
HpyCH4IV	ACGT	4 cut(s)	500, 552, 610, 645
HpyCH4V	TGCA	7 cut(s)	391, 936, 1415, 1502, 1574, 1663, 1903
HpyF3I	CTNAG	6 cut(s)	315, 342, 626, 902, 1490, 1794
HpySE526I	ACGT	4 cut(s)	500, 552, 610, 645
Hsp92I	GRCGYC	6 cut(s)	231, 545, 552, 610, 639, 645
Hsp92II	CATG	3 cut(s)	430, 1322, 1606
HspAI	GCGC	8 cut(s)	132, 186, 231, 583, 639, 750, 881, 1352
KasI	GGCGCC	2 cut(s)	230, 638
KflI	GGGWCCC	1 cut(s)	760
KroI	GCCGGC	2 cut(s)	287, 541
KroNI	GCCGGC	2 cut(s)	289, 543
Ksp22I	TGATCA	2 cut(s)	1185, 1654
LmnI	GCTCC	6 cut(s)	44, 93, 279, 296, 897, 1868
Lsp1109I	GCAGC	3 cut(s)	87, 1558, 1810
LweI	GCATC	2 cut(s)	1339, 1741
MaeI	CTAG	2 cut(s)	714, 1854
MaeII	ACGT	4 cut(s)	500, 552, 610, 645
MaeIII	GTNAC	3 cut(s)	629, 809, 1231
MfeI	CAATTG	1 cut(s)	1650
MflI	RGATCY	1 cut(s)	358
MhlI	GDGCHC	1 cut(s)	659
MluCI	AATT	3 cut(s)	977, 1053, 1650
MluI	ACGCGT	1 cut(s)	666
Mly113I	GGCGCC	2 cut(s)	231, 639
MlyI	GAGTC	5 cut(s)	257, 407, 488, 575, 880
MmeI	TCCRAC	3 cut(s)	402, 528, 1022
MreI	CGCCGGCG	1 cut(s)	541
MroNI	GCCGGC	2 cut(s)	287, 541
MroXI	GAANNNNTTC	1 cut(s)	23
MseI	TTAA	4 cut(s)	675, 1359, 1919, 1969
MspA1I	CMGCKG	1 cut(s)	472
MspI	CCGG	7 cut(s)	42, 234, 288, 294, 408, 542, 799
MspR9I	CCNGG	4 cut(s)	235, 800, 1289, 1860
MunI	CAATTG	1 cut(s)	1650
Mva1269I	GAATGC	1 cut(s)	1468
MvaI	CCWGG	2 cut(s)	1289, 1860
MvnI	CGCG	6 cut(s)	156, 221, 228, 668, 752, 1829
NaeI	GCCGGC	2 cut(s)	289, 543
NarI	GGCGCC	2 cut(s)	231, 639
NciI	CCSGG	2 cut(s)	235, 800
NgoMIV	GCCGGC	2 cut(s)	287, 541
NlaIII	CATG	3 cut(s)	430, 1322, 1606
NmeAIII	GCCGAG	2 cut(s)	469, 583
NmuCI	GTSAC	3 cut(s)	629, 809, 1231
NspI	RCATGY	1 cut(s)	1606
PceI	AGGCCT	1 cut(s)	1858
PctI	GAATGC	1 cut(s)	1468
PdiI	GCCGGC	2 cut(s)	289, 543
PdmI	GAANNNNTTC	1 cut(s)	23
PfeI	GAWTC	6 cut(s)	140, 967, 1218, 1342, 1756, 1763
PflFI	GACNNNGTC	2 cut(s)	565, 709
PleI	GAGTC	5 cut(s)	256, 407, 487, 574, 880
PluTI	GGCGCC	2 cut(s)	234, 642
PpsI	GAGTC	5 cut(s)	256, 407, 487, 574, 880
PpuMI	RGGWCCY	2 cut(s)	589, 760
Psp5II	RGGWCCY	2 cut(s)	589, 760
Psp6I	CCWGG	2 cut(s)	1287, 1858
PspFI	CCCAGC	1 cut(s)	1466
PspGI	CCWGG	2 cut(s)	1287, 1858
PspPI	GGNCC	5 cut(s)	589, 684, 724, 760, 796
PspPPI	RGGWCCY	2 cut(s)	589, 760
PstNI	CAGNNNCTG	2 cut(s)	901, 1759
PsuI	RGATCY	1 cut(s)	358
PsyI	GACNNNGTC	2 cut(s)	565, 709
RsaI	GTAC	1 cut(s)	860
RsaNI	GTAC	1 cut(s)	859
SalI	GTCGAC	1 cut(s)	621
SaqAI	TTAA	4 cut(s)	675, 1359, 1919, 1969
Sau96I	GGNCC	5 cut(s)	589, 684, 724, 760, 796
SchI	GAGTC	5 cut(s)	257, 407, 488, 575, 880
ScrFI	CCNGG	4 cut(s)	235, 800, 1289, 1860
SduI	GDGCHC	1 cut(s)	659
SfaNI	GCATC	2 cut(s)	1339, 1741
SfcI	CTRYAG	2 cut(s)	204, 1457
SfoI	GGCGCC	2 cut(s)	232, 640
SgrAI	CRCCGGYG	1 cut(s)	541
SinI	GGWCC	4 cut(s)	589, 684, 724, 760
SmlI	CTYRAG	2 cut(s)	14, 1223
SmoI	CTYRAG	2 cut(s)	14, 1223
Sse9I	AATT	3 cut(s)	977, 1053, 1650
SseBI	AGGCCT	1 cut(s)	1858
SspDI	GGCGCC	2 cut(s)	230, 638
SspMI	CTAG	2 cut(s)	714, 1854
StuI	AGGCCT	1 cut(s)	1858
StyD4I	CCNGG	4 cut(s)	233, 798, 1287, 1858
StyI	CCWWGG	2 cut(s)	1394, 1770
TaaI	ACNGT	3 cut(s)	1142, 1383, 1934
TaiI	ACGT	4 cut(s)	503, 555, 613, 648
TaqI	TCGA	8 cut(s)	138, 174, 368, 503, 622, 662, 1016, 1929
TaqII	GACCGA	1 cut(s)	578
TasI	AATT	3 cut(s)	977, 1053, 1650
TatI	WGTACW	1 cut(s)	858
TfiI	GAWTC	6 cut(s)	140, 967, 1218, 1342, 1756, 1763
Tru1I	TTAA	4 cut(s)	675, 1359, 1919, 1969
Tru9I	TTAA	4 cut(s)	675, 1359, 1919, 1969
TscAI	CASTG	3 cut(s)	902, 1386, 1749
TseFI	GTSAC	3 cut(s)	629, 809, 1231
TseI	GCWGC	3 cut(s)	75, 1571, 1823
Tsp45I	GTSAC	3 cut(s)	629, 809, 1231
TspDTI	ATGAA	7 cut(s)	980, 1072, 1437, 1715, 1727, 1936, 1951
TspRI	CASTG	3 cut(s)	902, 1386, 1749
Tth111I	GACNNNGTC	2 cut(s)	565, 709
VpaK11BI	GGWCC	4 cut(s)	589, 684, 724, 760
XbaI	TCTAGA	1 cut(s)	713
XceI	RCATGY	1 cut(s)	1606
XmiI	GTMKAC	1 cut(s)	622
XmnI	GAANNNNTTC	1 cut(s)	23
XspI	CTAG	2 cut(s)	714, 1854
ZraI	GACGTC	3 cut(s)	553, 611, 646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.