Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001376

Physical Location & Seq

Genomic Coordinates Forward (+)

28859107 .. 28863957

Gene Structure 4851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00189100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGGATTTCTCACTCAAGAAGTCCTTCAAATCTCTTGGCTCCAGTATACACATCTCTGCTGAAGCAGACCACAGCAGTCACGAGAAGCTCCCCATTCTACTGGATCACCACAACGAACAGCACGCAATGAGCGCCGTCGATTCCTCCGACCGCCGCGAGGTCATCGTCAAGATCGACGAGGGCGGCGCTTCCTCCACCATTGGAGAAGCCGACCCCGCGAAACCCGGCGCCGGGATTTGGCGGGAGTCCAGTATCGATTTCTGGAAGGAAGACGGGAGCAATGTCGGCTCCGGCGGGGGTTTTGAGTTTGCTCAGAAGAAGAAGAAGGCGGCGAAGACTGAGGAGGAGGATCCGCCGTCGAAGCTGATAGGGAGGTTCCTGCACAAGCAGAGAGCCTCCGGCGACTCGTCGTTGGACATGGATTTGGAGATGGACGAGCTCCGGCCGCAGGATTTGCCGCCGCTGGCGGAGTCCCCGAGGAACTCACGCACGTCGAGGGAGATCAAGGTGTCGTTCCAGTCGTTCCAGTCGCCGGCGTCGGACGTCGCCGAGACCGAGTCTGTTCGGAGGCGGCGCAAGGACCCCGACAACGAGGAACGACGTCGTAGCAGTCGACTGAGTGACGGCGGCGCCGACGTGGTTAGGTGCTCGTCGAACGCGTCGTTTAAGAGCAGGTCCGATTTGTTGAGGCTGAAGACGAGGTCTCGATTGATGGACCCGCCCGAGGGGTGGGACGAGGGTGCGGGTCGGGTCCCGAAATCGGGTATGATGAGGTCTGGGATGTTGGGCCGGGGCGGAGGTGACGATGAGGAGGACGACCCGTTTCTGGAGGAGGATTTGCCTGATGAGTACAAGAGGGGGAAGTTCAATGCACTGACTCTGCTCCAGTGGCTGAGTTTGGTTTTGATTATTGGGGCATTGGCTTGCACTCTTTCTATAAGAGTTTTGAGGGAGAAGAATCTGTGGAAATTGAAGCTGTGGAAATGGGAGGTGCTGATTTTGGTTTCGATTTGTGGGAGGCTGGTTTCGGGTTGGATGATAAAAATTATGGTGTTCTTTGTGGAAAGGAACTTCATTTTGAGGAAGAGGGTGTTGTATTTTGTTTATGGGATCAGGAAACCTGTTCAGAACTGTATTTGGCTTGGCCTTGTTTTGCTGGGTTGGCATTTCTTGCTGATCAGGAAGGTTGAGAACGAAACCAATGGTAGGATCCTTGAGTATGTGACTAAAGTGTTGCTTTGTCTCTTGATTGGGGGTTTGATTTGGTTGGTGAAGACCCTGGTTGTAAAGGTGCTTGCTTCGTCTTTCCATGTTAGATCGTATTTTGATCGGATTCAGGATGCGCTTTTTAATCAGTATGTGATCCAAACACTGTCGGGGCGGCCATGGATTGAGATTAGAAATGCAGAGGATGAAGAGGAGAGACTTGCTGATGAGGTTAGGAAGCTACAGAATGCTGGGGCTAATATGCCTCCTGACCTCAGGGCAAGTGCATTTCCTTCTGGGACAACTGGGAAGGCGGTTGGGAATGGCTCCGGTAGAAGTGGGCGGTTGATTGCTGCAAGTGGAGGGCTTGTGGGGAAGAGTGGCATGTTTTCAAAGCCACTTTCCAAGAAGTCAGGGGAGGTTGGGATCACAATTGATCACTTGCATAGGCTCAATCCAAAGAATGTGTCTGCTTGGAATATGAAGAGGCTAATGAATATAGTAAAATATGGGCATCTTACCACACTGGATGAGCAGATTCTGGATTCCACCAAGGATGAGGCTGATACTAAGATCAAAAGTGAAGTTGAGGCAAAGGCTGCTGCGAAAAGATATTTCGCAATGTGGCTAGGCCTGGCTCCAAATTCATTCTATTCATTCTCTGGCAGGCACATCTACCTGGAGGATTTGCTGCGTTTCATGCAAGAAGACGAGGCTTTAAAGACCATGAGTCTCTTTGAAGGGGCCTCTGAGAGCAAGAGAATCAGCAAAACTTCCTTGAAAAATTGGGTGGTCAATTGCTTTAGAGAACGGAGAGCACTTGCTTTGACTCTAACTGACACCAAAACAGCGGTGAACAGACTTCGACGCGTGGTGGACGTATTAGTTAGCATTATTATTATAATTATATGGCTGCTTGTGCTGGATATTGTCACCAGAGCCAATATTGTTTATGCAACTTCTCAGCTTGTGATTGTGGCATTTGTTTTTGGTAACTCATGCAAGACAGTCTTTGAAGCAGTCATATTTCTATTCGTGATGCACCCCTTTGACGTGGGAGATCGATGTGAAATTGGAGGAGTTCAGATGGTTGTAGAGGAGATGAATATCTTAACTACAGTTTTTCTAAGGTATGACAACGTAAAAATCGTGTACCCAAACAGTACCCTTGCAACTAAGCCCATCAATAACTTCTATCGTAGTCCGGACTCAGGAGATGCTGTTGAGTTCTGTGTCCATATAGCCACTCCGGCAGATAAGATTGCTGTTATGAAGCAAAGAATGATAAGTTACATTGAAAATAAGAAGGAGCACTGGTATCCTGCACCAATGTTCATATTAAAGGAAGTGGAAGAATTAAATAGGATGAGGTTTGCCATATGGCTGTCACATAGAATGAACTTCCAAGACATGGGAGAAAAGTGGGCAAGGAGAGCCCTTTTACTTGAAGAGATAGTACGGATCCTCCAGGAGCTTGACATTGAGTATCGTTTGCGGCCCATTGACATAAACGTCCGTGGCATGCCTCCCACAGCCACCACTCTGCCTCCCTCTAATTTCACAGCAACCACAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008381 GO:0009506 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0030054 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

927

Amino Acids

104.86

Weight (kDa)

8.97

Isoelectric Point (pI)

50.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MS_channel_2nd	PF00924	744 - 800	5e-11	Mechanosensitive ion channel, beta-domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78610 AT2G17010 AT2G17010
fragaria_vesca	FvH4_2g15780 FvH4_2g37870 FvH4_2g37870 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430
malus_domestica	MD05G1126700.v1.1 MD08G1006800.v1.1 MD08G1006900.v1.1 MD10G1129900.v1.1
prunus_persica	Prupe.1G358700_v2.0.a1 Prupe.8G170400_v2.0.a1
pyrus_communis	pycom05g12260 pycom08g00530 pycom08g00560 pycom08g00580
rosa_chinensis	RchiOBHm_Chr5g0071021 RchiOBHm_Chr6g0279131 RchiOBHm_Chr6g0303751
rosa_laevigata	RLG00000011049 RLG00000013165 RLG00000036184
rosa_multiflora	Rmu_co8207138.1_g000001 Rmu_co8395065.1_g000001 Rmu_sc0001141.1_g000023 Rmu_sc0012878.1_g000006 Rmu_sc0014203.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010020 Rroxscaffold_7G00164430 Rroxscaffold_7G00189100
rosa_rugosa	Rorug05G0409800 Rorug05G0409900 Rorug05G0410000 Rorug06G0122500 Rorug06G0324500
rosa_samantha	Rh5AG466100 Rh5BG484300 Rh5CG508900 Rh5DG495700 Rh6AG231300 Rh6AG438800 Rh6BG236200 Rh6BG464300 Rh6CG238200 Rh6CG451100 Rh6DG229800 Rh6DG438000
rosa_wichuraiana	Rw5G043280 Rw6G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2108
AasI	GACNNNNNNGTC	1 cut(s)	2717
AatII	GACGTC	2 cut(s)	546, 604
Acc36I	ACCTGC	1 cut(s)	663
AccB1I	GGYRCC	2 cut(s)	227, 629
AccB7I	CCANNNNNTGG	1 cut(s)	2617
AccI	GTMKAC	2 cut(s)	46, 613
AccII	CGCG	4 cut(s)	156, 218, 659, 2076
AccIII	TCCGGA	1 cut(s)	2410
AcoI	YGGCCR	2 cut(s)	443, 1382
AcsI	RAATTY	1 cut(s)	1849
AcuI	CTGAAG	2 cut(s)	81, 713
AcyI	GRCGYC	5 cut(s)	228, 536, 543, 601, 630
AfaI	GTAC	4 cut(s)	851, 2360, 2371, 2664
AflIII	ACRYGT	2 cut(s)	657, 2074
AgsI	TTSAA	9 cut(s)	28, 868, 973, 1599, 1946, 1987, 2222, 2504, 2654
AhdI	GACNNNNNGTC	1 cut(s)	1935
AjiI	CACGTC	3 cut(s)	492, 637, 2260
AjnI	CCWGG	4 cut(s)	1278, 1839, 1884, 2673
AluBI	AGCT	8 cut(s)	88, 364, 439, 976, 1447, 2173, 2680, 2781
AluI	AGCT	8 cut(s)	88, 364, 439, 976, 1447, 2173, 2680, 2781
Alw21I	GWGCWC	4 cut(s)	441, 650, 2026, 2520
Alw26I	GTCTC	5 cut(s)	545, 708, 1247, 1417, 1943
AlwNI	CAGNNNCTG	2 cut(s)	892, 1747
Ama87I	CYCGRG	2 cut(s)	475, 722
Aor13HI	TCCGGA	1 cut(s)	2410
AoxI	GGCC	7 cut(s)	443, 787, 1144, 1382, 1837, 1950, 2702
ApeKI	GCWGC	5 cut(s)	1559, 1805, 1808, 1897, 2119
ApoI	RAATTY	1 cut(s)	1849
ArsI	GACNNNNNNTTYG	2 cut(s)	1658, 1690
Asp700I	GAANNNNTTC	1 cut(s)	23
AspLEI	GCGC	6 cut(s)	134, 188, 230, 576, 632, 1345
AspS9I	GGNCC	7 cut(s)	580, 675, 715, 751, 787, 1950, 2703
AsuC2I	CCSGG	3 cut(s)	225, 232, 791
AsuHPI	GGTGA	5 cut(s)	98, 812, 1282, 2071, 2131
AvaI	CYCGRG	2 cut(s)	475, 722
AvaII	GGWCC	4 cut(s)	580, 675, 715, 751
AxyI	CCTNAGG	1 cut(s)	1481
BamHI	GGATCC	3 cut(s)	349, 1209, 2667
BanI	GGYRCC	2 cut(s)	227, 629
BanII	GRGCYC	2 cut(s)	441, 2644
BarI	GAAGNNNNNNTAC	2 cut(s)	2646, 2678
BauI	CACGAG	1 cut(s)	80
BbsI	GAAGAC	5 cut(s)	276, 341, 701, 1280, 1920
Bbv12I	GWGCWC	4 cut(s)	441, 650, 2026, 2520
BbvI	GCAGC	5 cut(s)	1546, 1792, 1795, 1884, 2106
BccI	CCATC	4 cut(s)	424, 706, 2287, 2396
BceAI	ACGGC	3 cut(s)	119, 340, 640
BciT130I	CCWGG	4 cut(s)	1280, 1841, 1886, 2675
BciVI	GTATCC	1 cut(s)	2535
BclI	TGATCA	2 cut(s)	1176, 1642
BcnI	CCSGG	3 cut(s)	225, 232, 791
BcoDI	GTCTC	5 cut(s)	545, 708, 1247, 1417, 1943
BfaI	CTAG	1 cut(s)	1835
BfmI	CTRYAG	2 cut(s)	1448, 2322
BfoI	RGCGCY	4 cut(s)	135, 189, 231, 633
BfuAI	ACCTGC	1 cut(s)	663
BfuI	GTATCC	1 cut(s)	2535
BglI	GCCNNNNNGGC	1 cut(s)	2456
Bme1390I	CCNGG	7 cut(s)	225, 232, 791, 1280, 1841, 1886, 2675
Bme18I	GGWCC	4 cut(s)	580, 675, 715, 751
BmeRI	GACNNNNNGTC	1 cut(s)	1935
BmeT110I	CYCGRG	2 cut(s)	475, 722
BmgBI	CACGTC	3 cut(s)	492, 637, 2260
BmgT120I	GGNCC	7 cut(s)	580, 675, 715, 751, 787, 1950, 2703
BmrFI	CCNGG	7 cut(s)	225, 232, 791, 1280, 1841, 1886, 2675
BmrI	ACTGGG	1 cut(s)	1521
BmsI	GCATC	4 cut(s)	1330, 1729, 2235, 2413
BmuI	ACTGGG	1 cut(s)	1521
BpiI	GAAGAC	5 cut(s)	276, 341, 701, 1280, 1920
BpmI	CTGGAG	5 cut(s)	25, 848, 869, 1907, 2657
BpuEI	CTTGAG	1 cut(s)	1235
BpuMI	CCSGG	3 cut(s)	225, 232, 791
Bsa29I	ATCGAT	2 cut(s)	255, 2269
BsaBI	GATNNNNATC	1 cut(s)	2312
BsaHI	GRCGYC	5 cut(s)	228, 536, 543, 601, 630
BsaI	GGTCTC	2 cut(s)	545, 708
BsaJI	CCNNGG	7 cut(s)	476, 723, 790, 1278, 1385, 1758, 2722
BsaWI	WCCGGW	2 cut(s)	1535, 2410
Bse118I	RCCGGY	1 cut(s)	532
Bse1I	ACTGG	9 cut(s)	42, 105, 249, 517, 526, 886, 1516, 1737, 2525
Bse21I	CCTNAGG	1 cut(s)	1481
Bse3DI	GCAATG	3 cut(s)	132, 286, 1833
Bse8I	GATNNNNATC	1 cut(s)	2312
BseAI	TCCGGA	1 cut(s)	2410
BseBI	CCWGG	4 cut(s)	1280, 1841, 1886, 2675
BseCI	ATCGAT	2 cut(s)	255, 2269
BseDI	CCNNGG	7 cut(s)	476, 723, 790, 1278, 1385, 1758, 2722
BseGI	GGATG	7 cut(s)	786, 1041, 1345, 1417, 1741, 1768, 2577
BseJI	GATNNNNATC	1 cut(s)	2312
BseMI	GCAATG	3 cut(s)	132, 286, 1833
BseMII	CTCAG	8 cut(s)	326, 330, 608, 884, 1495, 1947, 2183, 2430
BseNI	ACTGG	9 cut(s)	42, 105, 249, 517, 526, 886, 1516, 1737, 2525
BseRI	GAGGAG	7 cut(s)	356, 359, 824, 845, 1433, 2298, 2318
BseX3I	CGGCCG	1 cut(s)	443
BseXI	GCAGC	5 cut(s)	1546, 1792, 1795, 1884, 2106
BseYI	CCCAGC	2 cut(s)	1156, 1457
BsgI	GTGCAG	2 cut(s)	365, 2514
Bsh1236I	CGCG	4 cut(s)	156, 218, 659, 2076
Bsh1285I	CGRYCG	2 cut(s)	151, 446
BshFI	GGCC	7 cut(s)	445, 789, 1146, 1384, 1839, 1952, 2704
BshNI	GGYRCC	2 cut(s)	227, 629
BshVI	ATCGAT	2 cut(s)	255, 2269
BsiEI	CGRYCG	2 cut(s)	151, 446
BsiHKAI	GWGCWC	4 cut(s)	441, 650, 2026, 2520
BsiHKCI	CYCGRG	2 cut(s)	475, 722
BslFI	GGGAC	4 cut(s)	457, 737, 746, 1519
BsmAI	GTCTC	5 cut(s)	545, 708, 1247, 1417, 1943
BsmFI	GGGAC	4 cut(s)	457, 737, 746, 1519
BsmI	GAATGC	1 cut(s)	1459
BsnI	GGCC	7 cut(s)	445, 789, 1146, 1384, 1839, 1952, 2704
Bso31I	GGTCTC	2 cut(s)	545, 708
BsoBI	CYCGRG	2 cut(s)	475, 722
Bsp1286I	GDGCHC	5 cut(s)	441, 650, 2026, 2520, 2644
Bsp13I	TCCGGA	1 cut(s)	2410
Bsp19I	CCATGG	1 cut(s)	1385
BspANI	GGCC	7 cut(s)	445, 789, 1146, 1384, 1839, 1952, 2704
BspCNI	CTCAG	8 cut(s)	325, 331, 609, 885, 1494, 1948, 2182, 2429
BspDI	ATCGAT	2 cut(s)	255, 2269
BspEI	TCCGGA	1 cut(s)	2410
BspFNI	CGCG	4 cut(s)	156, 218, 659, 2076
BspMI	ACCTGC	1 cut(s)	663
BspT107I	GGYRCC	2 cut(s)	227, 629
BspTNI	GGTCTC	2 cut(s)	545, 708
BsrDI	GCAATG	3 cut(s)	132, 286, 1833
BsrFI	RCCGGY	1 cut(s)	532
BsrI	ACTGG	9 cut(s)	42, 105, 249, 517, 526, 886, 1516, 1737, 2525
BssAI	RCCGGY	1 cut(s)	532
BssECI	CCNNGG	7 cut(s)	476, 723, 790, 1278, 1385, 1758, 2722
BssNAI	GTATAC	1 cut(s)	47
BssNI	GRCGYC	5 cut(s)	228, 536, 543, 601, 630
BssSI	CACGAG	1 cut(s)	80
BssT1I	CCWWGG	2 cut(s)	1385, 1758
Bst1107I	GTATAC	1 cut(s)	47
Bst2BI	CACGAG	1 cut(s)	80
Bst2UI	CCWGG	4 cut(s)	1280, 1841, 1886, 2675
Bst4CI	ACNGT	5 cut(s)	1133, 1374, 2215, 2326, 2369
Bst6I	CTCTTC	5 cut(s)	1079, 1410, 1577, 1685, 2649
BstACI	GRCGYC	5 cut(s)	228, 536, 543, 601, 630
BstAPI	GCANNNNNTGC	3 cut(s)	454, 1171, 1805
BstC8I	GCNNGC	7 cut(s)	123, 465, 534, 925, 1296, 1874, 2729
BstDSI	CCRYGG	2 cut(s)	1385, 2722
BstF5I	GGATG	7 cut(s)	786, 1041, 1345, 1417, 1741, 1768, 2577
BstFNI	CGCG	4 cut(s)	156, 218, 659, 2076
BstH2I	RGCGCY	4 cut(s)	135, 189, 231, 633
BstHHI	GCGC	6 cut(s)	134, 188, 230, 576, 632, 1345
BstMAI	GTCTC	5 cut(s)	545, 708, 1247, 1417, 1943
BstMCI	CGRYCG	2 cut(s)	151, 446
BstNI	CCWGG	4 cut(s)	1280, 1841, 1886, 2675
BstNSI	RCATGY	2 cut(s)	1594, 2731
BstSCI	CCNGG	7 cut(s)	223, 230, 789, 1278, 1839, 1884, 2673
BstSFI	CTRYAG	2 cut(s)	1448, 2322
BstUI	CGCG	4 cut(s)	156, 218, 659, 2076
BstV1I	GCAGC	5 cut(s)	1546, 1792, 1795, 1884, 2106
BstV2I	GAAGAC	5 cut(s)	276, 341, 701, 1280, 1920
BstX2I	RGATCY	3 cut(s)	349, 1209, 2667
BstXI	CCANNNNNNTGG	1 cut(s)	100
BstYI	RGATCY	3 cut(s)	349, 1209, 2667
BstZ17I	GTATAC	1 cut(s)	47
BstZI	CGGCCG	1 cut(s)	443
Bsu15I	ATCGAT	2 cut(s)	255, 2269
Bsu36I	CCTNAGG	1 cut(s)	1481
BsuI	GTATCC	1 cut(s)	2535
BsuRI	GGCC	7 cut(s)	445, 789, 1146, 1384, 1839, 1952, 2704
BsuTUI	ATCGAT	2 cut(s)	255, 2269
BtgI	CCRYGG	2 cut(s)	1385, 2722
BtrI	CACGTC	3 cut(s)	492, 637, 2260
BtsCI	GGATG	7 cut(s)	786, 1041, 1345, 1417, 1741, 1768, 2577
BtsIMutI	CAGTG	5 cut(s)	872, 893, 1370, 1730, 2518
BveI	ACCTGC	1 cut(s)	663
Cac8I	GCNNGC	7 cut(s)	123, 465, 534, 925, 1296, 1874, 2729
CaiI	CAGNNNCTG	2 cut(s)	892, 1747
CfoI	GCGC	6 cut(s)	134, 188, 230, 576, 632, 1345
Cfr10I	RCCGGY	1 cut(s)	532
Cfr13I	GGNCC	7 cut(s)	580, 675, 715, 751, 787, 1950, 2703
ClaI	ATCGAT	2 cut(s)	255, 2269
CseI	GACGC	3 cut(s)	525, 648, 2082
Csp6I	GTAC	4 cut(s)	850, 2359, 2370, 2663
CviAII	CATG	9 cut(s)	418, 1310, 1386, 1591, 1906, 1933, 2205, 2617, 2728
CviQI	GTAC	4 cut(s)	850, 2359, 2370, 2663
DinI	GGCGCC	2 cut(s)	229, 631
DraI	TTTAAA	1 cut(s)	1926
DrdI	GACNNNNNNGTC	1 cut(s)	2717
DriI	GACNNNNNGTC	1 cut(s)	1935
DseDI	GACNNNNNNGTC	1 cut(s)	2717
EaeI	YGGCCR	2 cut(s)	443, 1382
EagI	CGGCCG	1 cut(s)	443
Eam1104I	CTCTTC	5 cut(s)	1079, 1410, 1577, 1685, 2649
Eam1105I	GACNNNNNGTC	1 cut(s)	1935
EarI	CTCTTC	5 cut(s)	1079, 1410, 1577, 1685, 2649
EciI	GGCGGA	3 cut(s)	342, 482, 810
Ecl136II	GAGCTC	1 cut(s)	439
EclXI	CGGCCG	1 cut(s)	443
Eco130I	CCWWGG	2 cut(s)	1385, 1758
Eco147I	AGGCCT	1 cut(s)	1839
Eco24I	GRGCYC	2 cut(s)	441, 2644
Eco31I	GGTCTC	2 cut(s)	545, 708
Eco47I	GGWCC	4 cut(s)	580, 675, 715, 751
Eco52I	CGGCCG	1 cut(s)	443
Eco53kI	GAGCTC	1 cut(s)	439
Eco57I	CTGAAG	2 cut(s)	81, 713
Eco81I	CCTNAGG	1 cut(s)	1481
Eco88I	CYCGRG	2 cut(s)	475, 722
EcoICRI	GAGCTC	1 cut(s)	439
EcoO109I	RGGNCCY	3 cut(s)	580, 751, 1950
EcoRII	CCWGG	4 cut(s)	1278, 1839, 1884, 2673
EcoT14I	CCWWGG	2 cut(s)	1385, 1758
EcoT38I	GRGCYC	2 cut(s)	441, 2644
EgeI	GGCGCC	2 cut(s)	229, 631
EheI	GGCGCC	2 cut(s)	229, 631
ErhI	CCWWGG	2 cut(s)	1385, 1758
FaeI	CATG	9 cut(s)	421, 1313, 1389, 1594, 1909, 1936, 2208, 2620, 2731
FalI	AAGNNNNNCTT	6 cut(s)	8, 40, 1221, 1253, 2201, 2233
FaqI	GGGAC	4 cut(s)	457, 737, 746, 1519
FatI	CATG	9 cut(s)	417, 1309, 1385, 1590, 1905, 1932, 2204, 2616, 2727
FauI	CCCGC	5 cut(s)	223, 234, 287, 726, 736
FauNDI	CATATG	1 cut(s)	2585
FbaI	TGATCA	2 cut(s)	1176, 1642
FblI	GTMKAC	2 cut(s)	46, 613
FokI	GGATG	7 cut(s)	793, 1048, 1352, 1424, 1748, 1775, 2584
FriOI	GRGCYC	2 cut(s)	441, 2644
FspBI	CTAG	1 cut(s)	1835
GlaI	GCGC	6 cut(s)	133, 187, 229, 575, 631, 1344
GsaI	CCCAGC	2 cut(s)	1160, 1461
GsuI	CTGGAG	5 cut(s)	25, 848, 869, 1907, 2657
HaeII	RGCGCY	4 cut(s)	135, 189, 231, 633
HaeIII	GGCC	7 cut(s)	445, 789, 1146, 1384, 1839, 1952, 2704
HgaI	GACGC	3 cut(s)	525, 648, 2082
HhaI	GCGC	6 cut(s)	134, 188, 230, 576, 632, 1345
Hin1I	GRCGYC	5 cut(s)	228, 536, 543, 601, 630
Hin1II	CATG	9 cut(s)	421, 1313, 1389, 1594, 1909, 1936, 2208, 2620, 2731
Hin6I	GCGC	6 cut(s)	132, 186, 228, 574, 630, 1343
HinP1I	GCGC	6 cut(s)	132, 186, 228, 574, 630, 1343
HincII	GTYRAC	1 cut(s)	614
HindII	GTYRAC	1 cut(s)	614
HphI	GGTGA	5 cut(s)	98, 812, 1282, 2071, 2131
Hpy166II	GTNNAC	5 cut(s)	47, 614, 2062, 2083, 2359
Hpy188I	TCNGA	9 cut(s)	148, 315, 541, 567, 679, 1128, 1332, 1957, 2292
Hpy8I	GTNNAC	5 cut(s)	47, 614, 2062, 2083, 2359
HpyAV	CCTTC	8 cut(s)	34, 259, 319, 1177, 1509, 1510, 1940, 2506
HpyCH4III	ACNGT	5 cut(s)	1133, 1374, 2215, 2326, 2369
HpyCH4IV	ACGT	8 cut(s)	491, 543, 601, 636, 2085, 2259, 2346, 2718
HpySE526I	ACGT	8 cut(s)	491, 543, 601, 636, 2085, 2259, 2346, 2718
Hsp92I	GRCGYC	5 cut(s)	228, 536, 543, 601, 630
Hsp92II	CATG	9 cut(s)	421, 1313, 1389, 1594, 1909, 1936, 2208, 2620, 2731
HspAI	GCGC	6 cut(s)	132, 186, 228, 574, 630, 1343
KasI	GGCGCC	2 cut(s)	227, 629
KflI	GGGWCCC	1 cut(s)	751
Kpn2I	TCCGGA	1 cut(s)	2410
KroI	GCCGGC	1 cut(s)	532
KroNI	GCCGGC	1 cut(s)	534
Ksp22I	TGATCA	2 cut(s)	1176, 1642
Lsp1109I	GCAGC	5 cut(s)	1546, 1792, 1795, 1884, 2106
LweI	GCATC	4 cut(s)	1330, 1729, 2235, 2413
MaeI	CTAG	1 cut(s)	1835
MaeII	ACGT	8 cut(s)	491, 543, 601, 636, 2085, 2259, 2346, 2718
MaeIII	GTNAC	8 cut(s)	77, 620, 800, 1222, 2137, 2198, 2495, 2592
MfeI	CAATTG	2 cut(s)	1638, 2002
MflI	RGATCY	3 cut(s)	349, 1209, 2667
MhlI	GDGCHC	5 cut(s)	441, 650, 2026, 2520, 2644
MluI	ACGCGT	2 cut(s)	657, 2074
Mly113I	GGCGCC	2 cut(s)	228, 630
MlyI	GAGTC	8 cut(s)	254, 398, 479, 566, 871, 1945, 2029, 2408
MmeI	TCCRAC	4 cut(s)	171, 393, 519, 1013
MreI	CGCCGGCG	1 cut(s)	532
MroI	TCCGGA	1 cut(s)	2410
MroNI	GCCGGC	1 cut(s)	532
MroXI	GAANNNNTTC	1 cut(s)	23
MseI	TTAA	6 cut(s)	666, 1350, 1925, 2318, 2546, 2564
MspA1I	CMGCKG	2 cut(s)	463, 2057
MspR9I	CCNGG	7 cut(s)	225, 232, 791, 1280, 1841, 1886, 2675
MunI	CAATTG	2 cut(s)	1638, 2002
Mva1269I	GAATGC	1 cut(s)	1459
MvaI	CCWGG	4 cut(s)	1280, 1841, 1886, 2675
MvnI	CGCG	4 cut(s)	156, 218, 659, 2076
NaeI	GCCGGC	1 cut(s)	534
NarI	GGCGCC	2 cut(s)	228, 630
NciI	CCSGG	3 cut(s)	225, 232, 791
NcoI	CCATGG	1 cut(s)	1385
NdeI	CATATG	1 cut(s)	2585
NgoMIV	GCCGGC	1 cut(s)	532
NlaIII	CATG	9 cut(s)	421, 1313, 1389, 1594, 1909, 1936, 2208, 2620, 2731
NmeAIII	GCCGAG	1 cut(s)	574
NmuCI	GTSAC	6 cut(s)	77, 620, 800, 1222, 2137, 2592
NspI	RCATGY	2 cut(s)	1594, 2731
PaeI	GCATGC	1 cut(s)	2731
PceI	AGGCCT	1 cut(s)	1839
PcsI	WCGNNNNNNNCGW	9 cut(s)	144, 171, 518, 552, 610, 630, 656, 659, 2352
PctI	GAATGC	1 cut(s)	1459
PdiI	GCCGGC	1 cut(s)	534
PdmI	GAANNNNTTC	1 cut(s)	23
PfeI	GAWTC	6 cut(s)	140, 958, 1333, 1744, 1751, 1968
PflFI	GACNNNGTC	2 cut(s)	556, 700
PflMI	CCANNNNNTGG	1 cut(s)	2617
PfoI	TCCNGGA	1 cut(s)	2673
PleI	GAGTC	8 cut(s)	253, 398, 478, 565, 871, 1944, 2029, 2408
PluTI	GGCGCC	2 cut(s)	231, 633
PpsI	GAGTC	8 cut(s)	253, 398, 478, 565, 871, 1944, 2029, 2408
PpuMI	RGGWCCY	2 cut(s)	580, 751
PsiI	TTATAA	1 cut(s)	2108
Psp124BI	GAGCTC	1 cut(s)	441
Psp5II	RGGWCCY	2 cut(s)	580, 751
Psp6I	CCWGG	4 cut(s)	1278, 1839, 1884, 2673
PspFI	CCCAGC	2 cut(s)	1156, 1457
PspGI	CCWGG	4 cut(s)	1278, 1839, 1884, 2673
PspPI	GGNCC	7 cut(s)	580, 675, 715, 751, 787, 1950, 2703
PspPPI	RGGWCCY	2 cut(s)	580, 751
PstNI	CAGNNNCTG	2 cut(s)	892, 1747
PsuI	RGATCY	3 cut(s)	349, 1209, 2667
PsyI	GACNNNGTC	2 cut(s)	556, 700
RsaI	GTAC	4 cut(s)	851, 2360, 2371, 2664
RsaNI	GTAC	4 cut(s)	850, 2359, 2370, 2663
SacI	GAGCTC	1 cut(s)	441
SalI	GTCGAC	1 cut(s)	612
SaqAI	TTAA	6 cut(s)	666, 1350, 1925, 2318, 2546, 2564
Sau96I	GGNCC	7 cut(s)	580, 675, 715, 751, 787, 1950, 2703
SchI	GAGTC	8 cut(s)	254, 398, 479, 566, 871, 1945, 2029, 2408
ScrFI	CCNGG	7 cut(s)	225, 232, 791, 1280, 1841, 1886, 2675
SduI	GDGCHC	5 cut(s)	441, 650, 2026, 2520, 2644
SfaNI	GCATC	4 cut(s)	1330, 1729, 2235, 2413
SfcI	CTRYAG	2 cut(s)	1448, 2322
SfoI	GGCGCC	2 cut(s)	229, 631
SgrAI	CRCCGGYG	1 cut(s)	532
SinI	GGWCC	4 cut(s)	580, 675, 715, 751
SmlI	CTYRAG	2 cut(s)	14, 1214
SmoI	CTYRAG	2 cut(s)	14, 1214
SphI	GCATGC	1 cut(s)	2731
SseBI	AGGCCT	1 cut(s)	1839
SspDI	GGCGCC	2 cut(s)	227, 629
SspI	AATATT	1 cut(s)	2152
SspMI	CTAG	1 cut(s)	1835
SstI	GAGCTC	1 cut(s)	441
StuI	AGGCCT	1 cut(s)	1839
StyD4I	CCNGG	7 cut(s)	223, 230, 789, 1278, 1839, 1884, 2673
StyI	CCWWGG	2 cut(s)	1385, 1758
TaaI	ACNGT	5 cut(s)	1133, 1374, 2215, 2326, 2369
TaiI	ACGT	8 cut(s)	494, 546, 604, 639, 2088, 2262, 2349, 2721
TaqII	GACCGA	1 cut(s)	569
TatI	WGTACW	1 cut(s)	849
TfiI	GAWTC	6 cut(s)	140, 958, 1333, 1744, 1751, 1968
Tru1I	TTAA	6 cut(s)	666, 1350, 1925, 2318, 2546, 2564
Tru9I	TTAA	6 cut(s)	666, 1350, 1925, 2318, 2546, 2564
TscAI	CASTG	5 cut(s)	879, 893, 1377, 1737, 2525
TseFI	GTSAC	6 cut(s)	77, 620, 800, 1222, 2137, 2592
TseI	GCWGC	5 cut(s)	1559, 1805, 1808, 1897, 2119
Tsp45I	GTSAC	6 cut(s)	77, 620, 800, 1222, 2137, 2592
TspGWI	ACGGA	3 cut(s)	2032, 2680, 2711
TspRI	CASTG	5 cut(s)	879, 893, 1377, 1737, 2525
Tth111I	GACNNNGTC	2 cut(s)	556, 700
Van91I	CCANNNNNTGG	1 cut(s)	2617
VpaK11BI	GGWCC	4 cut(s)	580, 675, 715, 751
XapI	RAATTY	1 cut(s)	1849
XceI	RCATGY	2 cut(s)	1594, 2731
XmiI	GTMKAC	2 cut(s)	46, 613
XmnI	GAANNNNTTC	1 cut(s)	23
XspI	CTAG	1 cut(s)	1835
ZraI	GACGTC	2 cut(s)	544, 602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.