Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001376

Physical Location & Seq

Genomic Coordinates Reverse (-)

56565544 .. 56573530

Gene Structure 7987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0409800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGAAGAAATACAGTCACAGTCAGATAATTATAGGTCTTCTTCATCATCAGCAAGCAGTCCAGCAAGTAGGGTGCCCTCAAGTAATTTTTTCTACTTGCGCAAACCTGGTTCACTCAGACAACCAATCTCATTTGAAGATTCACCTGAATGGGAGGATACAGATGTTGATGTTAGGGTGGAAGAAGGAGGTGACTCCATCAACATTGCAACCACTCCGGTCTCCCCATCGCTTTCAAAGCTCAATAGTGGATCCTTGCCATCCCCACCATTACCGGAGGGTGCAACTGTAGTGAGAAAGATTGCAGGGGCTTCAATTGTGTGGAAGGACTTGACTGTTACAATAAAAGGAAAAAGAAAGTACTCCGAGAGGGTTGTGAAGAGTTCAAATGGTTATGCATTGCCAGGAACTATAACAGTAATTATGGGTCCTGCTAAATCGGGGAAGTCCACACTACTAAGAGCACTTGCAGGAAGACTGCCTCAATCAGCCAAAATGTATGGTGAAGTGTTTGTAAACGGTGCAAAATCATCGATGCCATATGGTTCATATGGTTTTGTTAAGAGAGAAATCAATTTAATTGGATCTCTCACTGTTCGGGAGTTTCTGTATTATTCGGCACTCCTTCAGCTGCCTGGTTTCTTTTGTCAGAAAAAGAGTGTAGTAGAGGATGCTATTCATGCCATGTCACTGGGTGATTATGCAAACAGATTGATAGGTGGCCACTGTTATATGAAAGGCCTTCCTAATGGAGAGAGAAGGCGCGTTAGCATTGCCCGAGAGCTTGTGATGAGGCCTCATGTTTTATTCATAGATGAGCCTCTTTATCACCTTGATAGTGTCTCTGCACTTCTGATGATGGTTACATTGAAGAAGCTTGCAAGTACAGGTTGCACTCTTATATTTACCATTTACCAGAGCAGCACAGAAGTGTTTGGCCTATTTGACAGGATTTGTCTGCTTTCTAATGGAAATACCCTTTTCTTTGGAGAAACATTGTCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCTTGTCCGATTATGCAAAGTCCTTCCGATCACTTTCTGCGTGCAATAAATACAGATTTTGATAGGATCATTGCAATGTGCAAGAACTGGCAGGATGACAATGGGGACTTCTCATCCGTAAACATGGACACGGCTGTGGCAATACGCACCCTTGAAGCAACTTATAGATCATCAGCTGATGCTGCTGCAGTTGAAAATATGATACTAAGACTCACAGAGAAGGAAGGTCCATTACTTAAAAGCAAGGGAAAAGCTGGCAGTGCTACACGGATAGCAGTCTTAACTTGGAGATCGTTATTGATAATGTCAAGGGAATGGAAATACTACTGGCTTCGACTTATTCTTTATATCATTTTTACGCTCTCTGTTGGTACAGCATTTTCTGGCTTAGGGCATTCTTTGTCTTCAGTTGTGACCAGAGTTGCAGCCATATTTGTGTTTGTTTCATTTACTGCACTACTAAGCATTGCTGGAGTACCTGCAATTATGAAAGAAGTCAAGATATATGCGAGTGAAGAATCAAATCAGCACTTGGGGGCACTAGTCTTTTTAGTTGGGCAGCTTCTCTCTAGTATCCCATTCCTGTTTCTCATCTCTATTTCATCAAGTCTCGTCTTCTACTTCCTTATAGGATTGCGAGATGAGTTCAGCTTGTTGATGTACTTCGTGCTAAATTTCTTCATGTGCCTCTTAGTAAATGAAGGATTGATGCTAGTTGTTGTTTCTTTATGGCAAGATGTTTATTGGAGCACCTTGAGTCTACTATCTGTACAAGTGATAATGATGCTATCTGCGGGCTATTTCAGAATTCGAAATGCTTTGCCCAAACCAGTGTGGACATATCCAATATCCTATATTGCTTTCCACACCTACTCTATACAGGGGCTGTTGGAGAATGAGTACCTTGGGACTTCCTTTGCAGTTGGGCAGGTACGGACCATCTCTGGGTATCAAGCGCTTCGAAGTGCATATGACATCTCTATGGACAGTAATTCCAAGTGGGAAAATTTATTGGTCTTGTTTCTAATGGCAGTTGGGTATCGTATTCTCGTCTTTGGTTTACTGTACTTTCGAGTTGGGAAAAAGGAGTTCCTGTATAAGATTTTCAAGTGTAATCGGGATACGAACAATGCGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008381 GO:0009506 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0030054 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

723

Amino Acids

80.46

Weight (kDa)

9.1

Isoelectric Point (pI)

41.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	134 - 275	2.7e-17	ABC transporter
ABC2_membrane	PF01061	435 - 645	6e-28	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78610 AT2G17010 AT2G17010
fragaria_vesca	FvH4_2g15780 FvH4_2g37870 FvH4_2g37870 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430
malus_domestica	MD05G1126700.v1.1 MD08G1006800.v1.1 MD08G1006900.v1.1 MD10G1129900.v1.1
prunus_persica	Prupe.1G358700_v2.0.a1 Prupe.8G170400_v2.0.a1
pyrus_communis	pycom05g12260 pycom08g00530 pycom08g00560 pycom08g00580
rosa_chinensis	RchiOBHm_Chr5g0071021 RchiOBHm_Chr6g0279131 RchiOBHm_Chr6g0303751
rosa_laevigata	RLG00000011049 RLG00000013165 RLG00000036184
rosa_multiflora	Rmu_co8207138.1_g000001 Rmu_co8395065.1_g000001 Rmu_sc0001141.1_g000023 Rmu_sc0012878.1_g000006 Rmu_sc0014203.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010020 Rroxscaffold_7G00164430 Rroxscaffold_7G00189100
rosa_rugosa	Rorug05G0409800 Rorug05G0409900 Rorug05G0410000 Rorug06G0122500 Rorug06G0324500
rosa_samantha	Rh5AG466100 Rh5BG484300 Rh5CG508900 Rh5DG495700 Rh6AG231300 Rh6AG438800 Rh6BG236200 Rh6BG464300 Rh6CG238200 Rh6CG451100 Rh6DG229800 Rh6DG438000
rosa_wichuraiana	Rw5G043280 Rw6G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	101
Acc36I	ACCTGC	2 cut(s)	1519, 1951
AccB1I	GGYRCC	1 cut(s)	73
AccI	GTMKAC	1 cut(s)	1792
AccII	CGCG	1 cut(s)	765
AciI	CCGC	1 cut(s)	1826
AclWI	GGATC	4 cut(s)	246, 259, 592, 1106
AcoI	YGGCCR	1 cut(s)	721
AcsI	RAATTY	3 cut(s)	1705, 1839, 2038
AcuI	CTGAAG	2 cut(s)	611, 1422
AdeI	CACNNNGTG	1 cut(s)	695
AfaI	GTAC	9 cut(s)	362, 886, 1405, 1509, 1694, 1803, 1934, 1965, 2099
AfeI	AGCGCT	1 cut(s)	1989
AfiI	CCNNNNNNNGG	1 cut(s)	1977
AgsI	TTSAA	8 cut(s)	137, 237, 315, 387, 871, 1187, 1226, 2140
AhlI	ACTAGT	1 cut(s)	1573
AjnI	CCWGG	3 cut(s)	106, 403, 634
AleI	CACNNNNGTG	2 cut(s)	929, 1166
AluBI	AGCT	8 cut(s)	241, 631, 784, 877, 1208, 1286, 1594, 1683
AluI	AGCT	8 cut(s)	241, 631, 784, 877, 1208, 1286, 1594, 1683
Alw21I	GWGCWC	2 cut(s)	466, 1784
Alw26I	GTCTC	3 cut(s)	226, 847, 1646
AlwI	GGATC	4 cut(s)	246, 259, 592, 1106
AlwNI	CAGNNNCTG	1 cut(s)	1918
Ama87I	CYCGRG	1 cut(s)	777
Aor51HI	AGCGCT	1 cut(s)	1989
AoxI	GGCC	4 cut(s)	721, 739, 794, 937
ApeKI	GCWGC	7 cut(s)	631, 921, 1009, 1214, 1217, 1457, 1591
ApoI	RAATTY	3 cut(s)	1705, 1839, 2038
AspLEI	GCGC	3 cut(s)	102, 765, 1990
AspS9I	GGNCC	3 cut(s)	428, 1259, 1968
AsuHPI	GGTGA	5 cut(s)	135, 203, 515, 707, 821
AsuII	TTCGAA	2 cut(s)	1843, 1993
AvaI	CYCGRG	1 cut(s)	777
AvaII	GGWCC	3 cut(s)	428, 1259, 1968
BaeGI	GKGCMC	2 cut(s)	78, 1573
BaeI	ACNNNNGTAYC	2 cut(s)	150, 183
BalI	TGGCCA	1 cut(s)	723
BamHI	GGATCC	1 cut(s)	251
BanI	GGYRCC	1 cut(s)	73
BarI	GAAGNNNNNNTAC	2 cut(s)	1248, 1280
BbsI	GAAGAC	4 cut(s)	30, 481, 1428, 1639
Bbv12I	GWGCWC	2 cut(s)	466, 1784
BbvI	GCAGC	7 cut(s)	618, 933, 1021, 1201, 1204, 1469, 1603
BccI	CCATC	5 cut(s)	206, 235, 268, 853, 1979
BceAI	ACGGC	1 cut(s)	1179
BcgI	CGANNNNNNTGC	2 cut(s)	513, 547
BciT130I	CCWGG	3 cut(s)	108, 405, 636
BciVI	GTATCC	3 cut(s)	151, 1616, 2146
BcoDI	GTCTC	3 cut(s)	226, 847, 1646
BcuI	ACTAGT	1 cut(s)	1573
BfaI	CTAG	3 cut(s)	1574, 1602, 1745
BfmI	CTRYAG	2 cut(s)	288, 1218
BfoI	RGCGCY	1 cut(s)	1991
BfuAI	ACCTGC	2 cut(s)	1519, 1951
BfuI	GTATCC	3 cut(s)	151, 1616, 2146
BisI	GCNGC	7 cut(s)	632, 922, 1010, 1215, 1218, 1458, 1592
BlsI	GCNGC	7 cut(s)	633, 923, 1011, 1216, 1219, 1459, 1593
BmcAI	AGTACT	1 cut(s)	362
Bme1390I	CCNGG	3 cut(s)	108, 405, 636
Bme18I	GGWCC	3 cut(s)	428, 1259, 1968
BmeT110I	CYCGRG	1 cut(s)	777
BmgT120I	GGNCC	3 cut(s)	428, 1259, 1968
BmiI	GGNNCC	3 cut(s)	75, 253, 429
BmrFI	CCNGG	3 cut(s)	108, 405, 636
BmrI	ACTGGG	1 cut(s)	701
BmsI	GCATC	5 cut(s)	525, 661, 1201, 1731, 1806
BmuI	ACTGGG	1 cut(s)	701
BpiI	GAAGAC	4 cut(s)	30, 481, 1428, 1639
BpmI	CTGGAG	1 cut(s)	1524
Bpu10I	CCTNAGC	1 cut(s)	1420
Bpu14I	TTCGAA	2 cut(s)	1843, 1993
BpuEI	CTTGAG	2 cut(s)	64, 1807
Bsa29I	ATCGAT	1 cut(s)	533
BsaI	GGTCTC	1 cut(s)	226
BsaJI	CCNNGG	1 cut(s)	1936
BsaWI	WCCGGW	2 cut(s)	217, 274
BsaXI	ACNNNNNCTCC	6 cut(s)	593, 623, 1916, 1946, 2111, 2141
Bsc4I	CCNNNNNNNGG	1 cut(s)	1977
Bse1I	ACTGG	4 cut(s)	696, 1124, 1364, 1862
Bse3DI	GCAATG	6 cut(s)	204, 398, 771, 1101, 1113, 1497
BseBI	CCWGG	3 cut(s)	108, 405, 636
BseCI	ATCGAT	1 cut(s)	533
BseDI	CCNNGG	1 cut(s)	1936
BseGI	GGATG	4 cut(s)	260, 676, 1132, 1145
BseLI	CCNNNNNNNGG	1 cut(s)	1977
BseMI	GCAATG	6 cut(s)	204, 398, 771, 1101, 1113, 1497
BseMII	CTCAG	1 cut(s)	130
BseNI	ACTGG	4 cut(s)	696, 1124, 1364, 1862
BseSI	GKGCMC	2 cut(s)	78, 1573
BseXI	GCAGC	7 cut(s)	618, 933, 1021, 1201, 1204, 1469, 1603
BsgI	GTGCAG	2 cut(s)	831, 1470
Bsh1236I	CGCG	1 cut(s)	765
BshFI	GGCC	4 cut(s)	723, 741, 796, 939
BshNI	GGYRCC	1 cut(s)	73
BshVI	ATCGAT	1 cut(s)	533
BsiHKAI	GWGCWC	2 cut(s)	466, 1784
BsiHKCI	CYCGRG	1 cut(s)	777
BsiSI	CCGG	2 cut(s)	218, 275
BslFI	GGGAC	2 cut(s)	1151, 1954
BslI	CCNNNNNNNGG	1 cut(s)	1977
BsmAI	GTCTC	3 cut(s)	226, 847, 1646
BsmFI	GGGAC	2 cut(s)	1151, 1954
BsmI	GAATGC	1 cut(s)	1426
BsnI	GGCC	4 cut(s)	723, 741, 796, 939
Bso31I	GGTCTC	1 cut(s)	226
BsoBI	CYCGRG	1 cut(s)	777
Bsp119I	TTCGAA	2 cut(s)	1843, 1993
Bsp1286I	GDGCHC	4 cut(s)	78, 466, 1573, 1784
Bsp1407I	TGTACA	1 cut(s)	1801
Bsp143I	GATC	6 cut(s)	251, 584, 1060, 1098, 1199, 1322
BspACI	CCGC	1 cut(s)	1826
BspANI	GGCC	4 cut(s)	723, 741, 796, 939
BspCNI	CTCAG	1 cut(s)	129
BspDI	ATCGAT	1 cut(s)	533
BspFNI	CGCG	1 cut(s)	765
BspLI	GGNNCC	3 cut(s)	75, 253, 429
BspMAI	CTGCAG	1 cut(s)	1222
BspMI	ACCTGC	2 cut(s)	1519, 1951
BspPI	GGATC	4 cut(s)	246, 259, 592, 1106
BspT104I	TTCGAA	2 cut(s)	1843, 1993
BspT107I	GGYRCC	1 cut(s)	73
BspTNI	GGTCTC	1 cut(s)	226
BsrDI	GCAATG	6 cut(s)	204, 398, 771, 1101, 1113, 1497
BsrGI	TGTACA	1 cut(s)	1801
BsrI	ACTGG	4 cut(s)	696, 1124, 1364, 1862
BssECI	CCNNGG	1 cut(s)	1936
BssMI	GATC	6 cut(s)	251, 584, 1060, 1098, 1199, 1322
BssT1I	CCWWGG	1 cut(s)	1936
Bst2UI	CCWGG	3 cut(s)	108, 405, 636
Bst6I	CTCTTC	1 cut(s)	374
BstAUI	TGTACA	1 cut(s)	1801
BstBI	TTCGAA	2 cut(s)	1843, 1993
BstC8I	GCNNGC	6 cut(s)	55, 879, 1007, 1074, 1288, 1828
BstDEI	CTNAG	6 cut(s)	116, 458, 1238, 1420, 1493, 1723
BstF5I	GGATG	4 cut(s)	260, 676, 1132, 1145
BstFNI	CGCG	1 cut(s)	765
BstH2I	RGCGCY	1 cut(s)	1991
BstHHI	GCGC	3 cut(s)	102, 765, 1990
BstKTI	GATC	6 cut(s)	254, 587, 1063, 1101, 1202, 1325
BstMAI	GTCTC	3 cut(s)	226, 847, 1646
BstMBI	GATC	6 cut(s)	251, 584, 1060, 1098, 1199, 1322
BstMWI	GCNNNNNNNGC	4 cut(s)	238, 680, 1214, 1292
BstNI	CCWGG	3 cut(s)	108, 405, 636
BstSCI	CCNGG	3 cut(s)	106, 403, 634
BstSFI	CTRYAG	2 cut(s)	288, 1218
BstSLI	GKGCMC	2 cut(s)	78, 1573
BstUI	CGCG	1 cut(s)	765
BstV1I	GCAGC	7 cut(s)	618, 933, 1021, 1201, 1204, 1469, 1603
BstV2I	GAAGAC	4 cut(s)	30, 481, 1428, 1639
BstX2I	RGATCY	2 cut(s)	251, 584
BstXI	CCANNNNNNTGG	1 cut(s)	691
BstYI	RGATCY	2 cut(s)	251, 584
Bsu15I	ATCGAT	1 cut(s)	533
BsuI	GTATCC	3 cut(s)	151, 1616, 2146
BsuRI	GGCC	4 cut(s)	723, 741, 796, 939
BsuTUI	ATCGAT	1 cut(s)	533
BtgZI	GCGATG	1 cut(s)	213
BtsCI	GGATG	4 cut(s)	260, 676, 1132, 1145
BtsI	GCAGTG	1 cut(s)	1297
BtsIMutI	CAGTG	5 cut(s)	591, 689, 724, 1297, 1869
BveI	ACCTGC	2 cut(s)	1519, 1951
Cac8I	GCNNGC	6 cut(s)	55, 879, 1007, 1074, 1288, 1828
CaiI	CAGNNNCTG	1 cut(s)	1918
CfoI	GCGC	3 cut(s)	102, 765, 1990
Cfr13I	GGNCC	3 cut(s)	428, 1259, 1968
ClaI	ATCGAT	1 cut(s)	533
CsiI	ACCWGGT	1 cut(s)	106
Csp6I	GTAC	9 cut(s)	361, 885, 1404, 1508, 1693, 1802, 1933, 1964, 2098
CviAII	CATG	5 cut(s)	680, 685, 800, 1156, 1714
CviQI	GTAC	9 cut(s)	361, 885, 1404, 1508, 1693, 1802, 1933, 1964, 2098
DdeI	CTNAG	6 cut(s)	116, 458, 1238, 1420, 1493, 1723
DpnI	GATC	6 cut(s)	253, 586, 1062, 1100, 1201, 1324
DpnII	GATC	6 cut(s)	251, 584, 1060, 1098, 1199, 1322
DraIII	CACNNNGTG	1 cut(s)	695
EaeI	YGGCCR	1 cut(s)	721
Eam1104I	CTCTTC	1 cut(s)	374
EarI	CTCTTC	1 cut(s)	374
Eco130I	CCWWGG	1 cut(s)	1936
Eco147I	AGGCCT	2 cut(s)	741, 796
Eco31I	GGTCTC	1 cut(s)	226
Eco47I	GGWCC	3 cut(s)	428, 1259, 1968
Eco47III	AGCGCT	1 cut(s)	1989
Eco57I	CTGAAG	2 cut(s)	611, 1422
Eco88I	CYCGRG	1 cut(s)	777
EcoO109I	RGGNCCY	1 cut(s)	428
EcoRI	GAATTC	1 cut(s)	1839
EcoRII	CCWGG	3 cut(s)	106, 403, 634
EcoT14I	CCWWGG	1 cut(s)	1936
EcoT22I	ATGCAT	1 cut(s)	400
ErhI	CCWWGG	1 cut(s)	1936
FaeI	CATG	5 cut(s)	683, 688, 803, 1159, 1717
FaqI	GGGAC	2 cut(s)	1151, 1954
FatI	CATG	5 cut(s)	679, 684, 799, 1155, 1713
FauI	CCCGC	1 cut(s)	1819
FauNDI	CATATG	3 cut(s)	541, 550, 2002
FblI	GTMKAC	1 cut(s)	1792
Fnu4HI	GCNGC	7 cut(s)	632, 922, 1010, 1215, 1218, 1458, 1592
FokI	GGATG	4 cut(s)	247, 683, 1132, 1139
Fsp4HI	GCNGC	7 cut(s)	632, 922, 1010, 1215, 1218, 1458, 1592
FspBI	CTAG	3 cut(s)	1574, 1602, 1745
FspI	TGCGCA	1 cut(s)	101
GlaI	GCGC	3 cut(s)	101, 764, 1989
GluI	GCNGC	7 cut(s)	632, 922, 1010, 1215, 1218, 1458, 1592
GsuI	CTGGAG	1 cut(s)	1524
HaeII	RGCGCY	1 cut(s)	1991
HaeIII	GGCC	4 cut(s)	723, 741, 796, 939
HapII	CCGG	2 cut(s)	218, 275
HhaI	GCGC	3 cut(s)	102, 765, 1990
Hin1II	CATG	5 cut(s)	683, 688, 803, 1159, 1717
Hin6I	GCGC	3 cut(s)	100, 763, 1988
HinP1I	GCGC	3 cut(s)	100, 763, 1988
HindIII	AAGCTT	1 cut(s)	875
HinfI	GANTC	5 cut(s)	140, 194, 1242, 1550, 1789
HpaII	CCGG	2 cut(s)	218, 275
HphI	GGTGA	5 cut(s)	135, 203, 515, 707, 821
Hpy166II	GTNNAC	7 cut(s)	113, 450, 517, 1153, 1793, 1869, 2093
Hpy188I	TCNGA	8 cut(s)	25, 119, 367, 651, 855, 1041, 1060, 1838
Hpy188III	TCNNGA	3 cut(s)	599, 1531, 2150
Hpy8I	GTNNAC	7 cut(s)	113, 450, 517, 1153, 1793, 1869, 2093
HpyAV	CCTTC	9 cut(s)	179, 319, 635, 752, 753, 1065, 1246, 1250, 1727
HpyF10VI	GCNNNNNNNGC	4 cut(s)	238, 680, 1214, 1292
HpyF3I	CTNAG	6 cut(s)	116, 458, 1238, 1420, 1493, 1723
Hsp92II	CATG	5 cut(s)	683, 688, 803, 1159, 1717
HspAI	GCGC	3 cut(s)	100, 763, 1988
Kzo9I	GATC	6 cut(s)	251, 584, 1060, 1098, 1199, 1322
LmnI	GCTCC	1 cut(s)	1779
Lsp1109I	GCAGC	7 cut(s)	618, 933, 1021, 1201, 1204, 1469, 1603
LweI	GCATC	5 cut(s)	525, 661, 1201, 1731, 1806
MabI	ACCWGGT	1 cut(s)	106
MaeI	CTAG	3 cut(s)	1574, 1602, 1745
MaeIII	GTNAC	6 cut(s)	15, 191, 337, 687, 862, 1444
MalI	GATC	6 cut(s)	253, 586, 1062, 1100, 1201, 1324
MboI	GATC	6 cut(s)	251, 584, 1060, 1098, 1199, 1322
MfeI	CAATTG	1 cut(s)	315
MflI	RGATCY	2 cut(s)	251, 584
MhlI	GDGCHC	4 cut(s)	78, 466, 1573, 1784
MlsI	TGGCCA	1 cut(s)	723
MluNI	TGGCCA	1 cut(s)	723
MlyI	GAGTC	3 cut(s)	188, 1236, 1798
MmeI	TCCRAC	1 cut(s)	1902
Mox20I	TGGCCA	1 cut(s)	723
Mph1103I	ATGCAT	1 cut(s)	400
MscI	TGGCCA	1 cut(s)	723
MseI	TTAA	4 cut(s)	561, 578, 1269, 1313
MslI	CAYNNNNRTG	6 cut(s)	148, 929, 1106, 1166, 1466, 2012
Msp20I	TGGCCA	1 cut(s)	723
MspA1I	CMGCKG	2 cut(s)	631, 1208
MspI	CCGG	2 cut(s)	218, 275
MspR9I	CCNGG	3 cut(s)	108, 405, 636
MunI	CAATTG	1 cut(s)	315
Mva1269I	GAATGC	1 cut(s)	1426
MvaI	CCWGG	3 cut(s)	108, 405, 636
MvnI	CGCG	1 cut(s)	765
MwoI	GCNNNNNNNGC	4 cut(s)	238, 680, 1214, 1292
NdeI	CATATG	3 cut(s)	541, 550, 2002
NdeII	GATC	6 cut(s)	251, 584, 1060, 1098, 1199, 1322
NlaIII	CATG	5 cut(s)	683, 688, 803, 1159, 1717
NlaIV	GGNNCC	3 cut(s)	75, 253, 429
NmuCI	GTSAC	4 cut(s)	15, 191, 687, 1444
NsbI	TGCGCA	1 cut(s)	101
NsiI	ATGCAT	1 cut(s)	400
NspV	TTCGAA	2 cut(s)	1843, 1993
OliI	CACNNNNGTG	2 cut(s)	929, 1166
PceI	AGGCCT	2 cut(s)	741, 796
PcsI	WCGNNNNNNNCGW	1 cut(s)	2162
PctI	GAATGC	1 cut(s)	1426
PfeI	GAWTC	2 cut(s)	140, 1550
PkrI	GCNGC	7 cut(s)	633, 923, 1011, 1216, 1219, 1459, 1593
PleI	GAGTC	3 cut(s)	188, 1236, 1797
PpsI	GAGTC	3 cut(s)	188, 1236, 1797
PpuMI	RGGWCCY	1 cut(s)	428
Psp5II	RGGWCCY	1 cut(s)	428
Psp6I	CCWGG	3 cut(s)	106, 403, 634
PspGI	CCWGG	3 cut(s)	106, 403, 634
PspN4I	GGNNCC	3 cut(s)	75, 253, 429
PspPI	GGNCC	3 cut(s)	428, 1259, 1968
PspPPI	RGGWCCY	1 cut(s)	428
PstI	CTGCAG	1 cut(s)	1222
PstNI	CAGNNNCTG	1 cut(s)	1918
PsuI	RGATCY	2 cut(s)	251, 584
PvuII	CAGCTG	2 cut(s)	631, 1208
RsaI	GTAC	9 cut(s)	362, 886, 1405, 1509, 1694, 1803, 1934, 1965, 2099
RsaNI	GTAC	9 cut(s)	361, 885, 1404, 1508, 1693, 1802, 1933, 1964, 2098
RseI	CAYNNNNRTG	6 cut(s)	148, 929, 1106, 1166, 1466, 2012
SaqAI	TTAA	4 cut(s)	561, 578, 1269, 1313
SatI	GCNGC	7 cut(s)	632, 922, 1010, 1215, 1218, 1458, 1592
Sau3AI	GATC	6 cut(s)	251, 584, 1060, 1098, 1199, 1322
Sau96I	GGNCC	3 cut(s)	428, 1259, 1968
ScaI	AGTACT	1 cut(s)	362
SchI	GAGTC	3 cut(s)	188, 1236, 1798
ScrFI	CCNGG	3 cut(s)	108, 405, 636
SduI	GDGCHC	4 cut(s)	78, 466, 1573, 1784
SexAI	ACCWGGT	1 cut(s)	106
SfaNI	GCATC	5 cut(s)	525, 661, 1201, 1731, 1806
SfcI	CTRYAG	2 cut(s)	288, 1218
SfuI	TTCGAA	2 cut(s)	1843, 1993
SinI	GGWCC	3 cut(s)	428, 1259, 1968
SmiMI	CAYNNNNRTG	6 cut(s)	148, 929, 1106, 1166, 1466, 2012
SmlI	CTYRAG	2 cut(s)	79, 1786
SmoI	CTYRAG	2 cut(s)	79, 1786
SpeI	ACTAGT	1 cut(s)	1573
SseBI	AGGCCT	2 cut(s)	741, 796
SsiI	CCGC	1 cut(s)	1826
SspMI	CTAG	3 cut(s)	1574, 1602, 1745
StuI	AGGCCT	2 cut(s)	741, 796
StyD4I	CCNGG	3 cut(s)	106, 403, 634
StyI	CCWWGG	1 cut(s)	1936
TaqI	TCGA	5 cut(s)	533, 1366, 1843, 1993, 2104
TatI	WGTACW	5 cut(s)	360, 884, 1692, 1801, 2097
TfiI	GAWTC	2 cut(s)	140, 1550
Tru1I	TTAA	4 cut(s)	561, 578, 1269, 1313
Tru9I	TTAA	4 cut(s)	561, 578, 1269, 1313
TscAI	CASTG	5 cut(s)	598, 696, 731, 1297, 1869
TseFI	GTSAC	4 cut(s)	15, 191, 687, 1444
TseI	GCWGC	7 cut(s)	631, 921, 1009, 1214, 1217, 1457, 1591
Tsp45I	GTSAC	4 cut(s)	15, 191, 687, 1444
TspGWI	ACGGA	3 cut(s)	1138, 1315, 1981
TspRI	CASTG	5 cut(s)	598, 696, 731, 1297, 1869
VpaK11BI	GGWCC	3 cut(s)	428, 1259, 1968
XapI	RAATTY	3 cut(s)	1705, 1839, 2038
XmiI	GTMKAC	1 cut(s)	1792
XspI	CTAG	3 cut(s)	1574, 1602, 1745
ZrmI	AGTACT	1 cut(s)	362
Zsp2I	ATGCAT	1 cut(s)	400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.