Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0001376

Physical Location & Seq

Genomic Coordinates Reverse (-)

41045102 .. 41050079

Gene Structure 4978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG229800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGATTTCTCACTCAAGAAATCCTTCAAATCTCTTGGCTCCGGTAAACACATCTCTGCTTCTGAAGCAGACCACGGCAGCCACGAGAAGCTCCCCATTCTACTGGATCACCACAACGAACAGCACGCAATGAGCGCCGTCGATTCCTCCGACCGCCGCGAGGTCATCGTCAAGATCGACCAGGGCGGCGCTTCCTCCACCACCACTACAGAAGCCGACCCCGCGAAACGCGGCGCCGGGATTTGGAGGGAGTCCAGTATTGATTTCTGGAAGGACGACGGGAGCAATGCCGGCGCCGGCGGGGGTTTTGAGTTTGCTCAGAAGAAGAAGACGGCGGTGAAGACGGAGGAGGAGGAGGAGGAGGATCCGCCGTCGAAGCTGATAGGGCGGTTCCTGCACAAGCAGAGAGCCTCCGGCGACTCGTCGTTGGACATGGATTTGGAGATGGCCGAGCTACGGCAGCAGGATTTGCCGCCGCTGGCGGAGTCTCCGAGGAACTCACGCATGTCGAGGGAGATCAAGGTGTCGTTCCAGTCGTTCCAGTCGCCGGCGTCGGACGTCGCCGAGACCGAGTCTGTTCGGCGGCGGCGCAAGGACCCCGACGACGAGGAACGACGTCGTAGCAGTCGACTGAGTGACGGCGGCGCCGACGTCATTAGGTGCTCGTCGAACGCGTCGTTTAAGGGCAGGTCCGATTTGTTGAGGCTGAAGACGAGGTCTAGATTGATGGACCCGCCCGAGGGGTGGGACGAGGGCGCGGGTCGGGTCCCGAAATCGGGTATGATGAGGTCTGGGATGTTGGGCCGGGGCGGAGGTGACGATGAGGAGGACGACCCGTTTTTGGATGAGGATTTGCCTGATGAGTACAAGAGGGCGAAATTCAATGCGCTGACTCTGCTCCAGTGGCTGAGTTTGGTTTTGATTATTGGGGCATTGGCTTGCACTCTTTCTATAAGAGTTTTGCGGGAGATGAATCTGTGGAAATTGAAGCTGTGGAAATGGGAGGTGCTAATTTTGGTTTCGATTTGTGGGAGGCTGGTTTCGGGTTGGATGATAAAAATTATGGTGTTCTTTGTGGAGAGGAACTTCATTTTGAGGAAGAGGGTGTTGTATTTTGTTTATGGGATCAGGAAGCCTGTTCAGAACTGTATTTGGCTTGGCCTTGTTTTGACGGGTTGGCATTTCTTGCTGATCAGGAAGGTTGAGAAGGAAACCAATGGTAGAATCCTTGAGTATGTGACTAAAGTGTTGCTTTGTCTCTTGATTGGGGGTTTGATTTGGTTGGTGAAGACCCTGGTTGTAAAAGTGCTTGCTTCATCTTTCCATGTTAGATCGTATTTTGATCGGATTCAGGATGCGCTTTTTAATCAGTATGTGATCCAAACACTGTCGGGGCGGCCTTGGATTGAGATAAAAAATGCAGAGGATGAAGAGGAGAGACTTGCTGATGAGGTTAGGAAGCTACAGAATGCTGGGGCTAATATGCCTCCTGACCTCAGGGCAAGTGCATTTCCTTCTGGGACAACTGGGAAGGCCATTGGGAATGGCGGCTCTGGTAGAAGTGGGCGGTTGATTGCTGCAAGTGGAGGGCTTGTGGGGAAGAGTGGCATGTTTTCAAAGCCACTTTCCAAGAAGTCAGGGGAGGTTGGGATCACAATTGATCACTTGCATAGGCTCAATCCAAAGAATGTGTCTGCTTGGAATATGAAGAGGCTAATGAATATAGTAAAATATGGGCATCTTACCACACTGGATGAGCAGATTCTGGATTCAACCAAGGATGAGGGTGAGGGTGATACTAAGATCAAAAGTGAAGTTGAGGCTAAGGCTGCCGCGAAAAAGATATTTCGCAATGTGGCTAGGCCTGGCTCCAAGTATGTTTCCATTTATTCCCTTTGGGTTTGTGTGCATTTATCTGCATTCTTAACTTGGCTCGACTGTGTTATGTTGTTCATATCTGTTTCTTTCATTGATCAAAAGTTGAAAATGCCTGCAGCTTCAAAAATTCTACTTTCAGGTTTCAATGTCAATATTTATGAGCACAGAAAATTAAAACATGTTGATGTAATGTTATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008381 GO:0009506 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0030054 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

692

Amino Acids

77.59

Weight (kDa)

9.14

Isoelectric Point (pI)

47.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78610 AT2G17010 AT2G17010
fragaria_vesca	FvH4_2g15780 FvH4_2g37870 FvH4_2g37870 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430
malus_domestica	MD05G1126700.v1.1 MD08G1006800.v1.1 MD08G1006900.v1.1 MD10G1129900.v1.1
prunus_persica	Prupe.1G358700_v2.0.a1 Prupe.8G170400_v2.0.a1
pyrus_communis	pycom05g12260 pycom08g00530 pycom08g00560 pycom08g00580
rosa_chinensis	RchiOBHm_Chr5g0071021 RchiOBHm_Chr6g0279131 RchiOBHm_Chr6g0303751
rosa_laevigata	RLG00000011049 RLG00000013165 RLG00000036184
rosa_multiflora	Rmu_co8207138.1_g000001 Rmu_co8395065.1_g000001 Rmu_sc0001141.1_g000023 Rmu_sc0012878.1_g000006 Rmu_sc0014203.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010020 Rroxscaffold_7G00164430 Rroxscaffold_7G00189100
rosa_rugosa	Rorug05G0409800 Rorug05G0409900 Rorug05G0410000 Rorug06G0122500 Rorug06G0324500
rosa_samantha	Rh5AG466100 Rh5BG484300 Rh5CG508900 Rh5DG495700 Rh6AG231300 Rh6AG438800 Rh6BG236200 Rh6BG464300 Rh6CG238200 Rh6CG451100 Rh6DG229800 Rh6DG438000
rosa_wichuraiana	Rw5G043280 Rw6G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	561, 619, 654
Acc36I	ACCTGC	1 cut(s)	678
AccB1I	GGYRCC	3 cut(s)	233, 293, 644
AccI	GTMKAC	1 cut(s)	628
AccII	CGCG	6 cut(s)	159, 224, 231, 674, 758, 1835
AclWI	GGATC	6 cut(s)	114, 359, 372, 1133, 1372, 1658
AcoI	YGGCCR	1 cut(s)	447
AcsI	RAATTY	2 cut(s)	878, 2004
AcuI	CTGAAG	2 cut(s)	84, 728
AcyI	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
AfaI	GTAC	1 cut(s)	866
AflIII	ACRYGT	2 cut(s)	672, 2056
AgsI	TTSAA	8 cut(s)	28, 883, 988, 1617, 1773, 1984, 2001, 2023
AjnI	CCWGG	3 cut(s)	180, 1293, 1864
AluBI	AGCT	6 cut(s)	91, 379, 454, 991, 1462, 1997
AluI	AGCT	6 cut(s)	91, 379, 454, 991, 1462, 1997
Alw21I	GWGCWC	2 cut(s)	665, 2043
Alw26I	GTCTC	4 cut(s)	492, 560, 1262, 1432
AlwI	GGATC	6 cut(s)	114, 359, 372, 1133, 1372, 1658
AlwNI	CAGNNNCTG	2 cut(s)	907, 1765
Ama87I	CYCGRG	1 cut(s)	737
AoxI	GGCC	6 cut(s)	447, 802, 1159, 1397, 1533, 1862
ApeKI	GCWGC	5 cut(s)	78, 460, 1577, 1829, 1994
ApoI	RAATTY	2 cut(s)	878, 2004
ArsI	GACNNNNNNTTYG	2 cut(s)	1676, 1708
Asp700I	GAANNNNTTC	1 cut(s)	23
AspLEI	GCGC	9 cut(s)	137, 191, 236, 296, 591, 647, 758, 889, 1360
AspS9I	GGNCC	5 cut(s)	595, 690, 730, 766, 802
AsuC2I	CCSGG	2 cut(s)	238, 806
AsuHPI	GGTGA	6 cut(s)	101, 349, 827, 1297, 1799, 1805
AvaI	CYCGRG	1 cut(s)	737
AvaII	GGWCC	4 cut(s)	595, 690, 730, 766
AxyI	CCTNAGG	1 cut(s)	1496
BamHI	GGATCC	1 cut(s)	364
BanI	GGYRCC	3 cut(s)	233, 293, 644
BauI	CACGAG	1 cut(s)	83
BbsI	GAAGAC	4 cut(s)	335, 347, 716, 1295
Bbv12I	GWGCWC	2 cut(s)	665, 2043
BbvI	GCAGC	5 cut(s)	90, 472, 1564, 1816, 2006
BccI	CCATC	2 cut(s)	439, 721
BceAI	ACGGC	6 cut(s)	91, 122, 348, 355, 473, 655
BciT130I	CCWGG	3 cut(s)	182, 1295, 1866
BclI	TGATCA	3 cut(s)	1191, 1660, 1972
BcnI	CCSGG	2 cut(s)	238, 806
BcoDI	GTCTC	4 cut(s)	492, 560, 1262, 1432
BfaI	CTAG	2 cut(s)	720, 1860
BfmI	CTRYAG	3 cut(s)	207, 1463, 1992
BfoI	RGCGCY	5 cut(s)	138, 192, 237, 297, 648
BfuAI	ACCTGC	1 cut(s)	678
Bme1390I	CCNGG	5 cut(s)	182, 238, 806, 1295, 1866
Bme18I	GGWCC	4 cut(s)	595, 690, 730, 766
BmeT110I	CYCGRG	1 cut(s)	737
BmgT120I	GGNCC	5 cut(s)	595, 690, 730, 766, 802
BmrFI	CCNGG	5 cut(s)	182, 238, 806, 1295, 1866
BmrI	ACTGGG	1 cut(s)	1536
BmsI	GCATC	2 cut(s)	1345, 1747
BmuI	ACTGGG	1 cut(s)	1536
BpiI	GAAGAC	4 cut(s)	335, 347, 716, 1295
BpmI	CTGGAG	1 cut(s)	884
Bpu10I	CCTNAGC	1 cut(s)	1824
BpuEI	CTTGAG	1 cut(s)	1250
BpuMI	CCSGG	2 cut(s)	238, 806
BsaHI	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
BsaI	GGTCTC	1 cut(s)	560
BsaJI	CCNNGG	8 cut(s)	73, 181, 491, 738, 805, 1293, 1400, 1776
BsaWI	WCCGGW	1 cut(s)	41
BsaXI	ACNNNNNCTCC	2 cut(s)	1578, 1608
Bse118I	RCCGGY	3 cut(s)	290, 296, 547
Bse1I	ACTGG	7 cut(s)	108, 255, 532, 541, 901, 1531, 1755
Bse21I	CCTNAGG	1 cut(s)	1496
Bse3DI	GCAATG	3 cut(s)	135, 292, 1858
BseBI	CCWGG	3 cut(s)	182, 1295, 1866
BseDI	CCNNGG	8 cut(s)	73, 181, 491, 738, 805, 1293, 1400, 1776
BseGI	GGATG	7 cut(s)	801, 850, 1056, 1360, 1432, 1759, 1786
BseMI	GCAATG	3 cut(s)	135, 292, 1858
BseMII	CTCAG	4 cut(s)	332, 623, 899, 1510
BseNI	ACTGG	7 cut(s)	108, 255, 532, 541, 901, 1531, 1755
BseRI	GAGGAG	7 cut(s)	362, 365, 368, 371, 374, 839, 1448
BseXI	GCAGC	5 cut(s)	90, 472, 1564, 1816, 2006
BseYI	CCCAGC	1 cut(s)	1472
BsgI	GTGCAG	1 cut(s)	380
Bsh1236I	CGCG	6 cut(s)	159, 224, 231, 674, 758, 1835
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	6 cut(s)	449, 804, 1161, 1399, 1535, 1864
BshNI	GGYRCC	3 cut(s)	233, 293, 644
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	2 cut(s)	665, 2043
BsiHKCI	CYCGRG	1 cut(s)	737
BsiSI	CCGG	7 cut(s)	42, 237, 291, 297, 414, 548, 805
BslFI	GGGAC	3 cut(s)	752, 761, 1534
BsmAI	GTCTC	4 cut(s)	492, 560, 1262, 1432
BsmFI	GGGAC	3 cut(s)	752, 761, 1534
BsmI	GAATGC	2 cut(s)	1474, 1919
BsnI	GGCC	6 cut(s)	449, 804, 1161, 1399, 1535, 1864
Bso31I	GGTCTC	1 cut(s)	560
BsoBI	CYCGRG	1 cut(s)	737
Bsp1286I	GDGCHC	2 cut(s)	665, 2043
BspANI	GGCC	6 cut(s)	449, 804, 1161, 1399, 1535, 1864
BspCNI	CTCAG	4 cut(s)	331, 624, 900, 1509
BspFNI	CGCG	6 cut(s)	159, 224, 231, 674, 758, 1835
BspMAI	CTGCAG	1 cut(s)	1996
BspMI	ACCTGC	1 cut(s)	678
BspPI	GGATC	6 cut(s)	114, 359, 372, 1133, 1372, 1658
BspT107I	GGYRCC	3 cut(s)	233, 293, 644
BspTNI	GGTCTC	1 cut(s)	560
BsrDI	GCAATG	3 cut(s)	135, 292, 1858
BsrFI	RCCGGY	3 cut(s)	290, 296, 547
BsrI	ACTGG	7 cut(s)	108, 255, 532, 541, 901, 1531, 1755
BssAI	RCCGGY	3 cut(s)	290, 296, 547
BssECI	CCNNGG	8 cut(s)	73, 181, 491, 738, 805, 1293, 1400, 1776
BssNI	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
BssSI	CACGAG	1 cut(s)	83
BssT1I	CCWWGG	2 cut(s)	1400, 1776
Bst2BI	CACGAG	1 cut(s)	83
Bst2UI	CCWGG	3 cut(s)	182, 1295, 1866
Bst4CI	ACNGT	3 cut(s)	1148, 1389, 1940
Bst6I	CTCTTC	4 cut(s)	1094, 1425, 1595, 1703
BstACI	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
BstAPI	GCANNNNNTGC	2 cut(s)	469, 1186
BstC8I	GCNNGC	8 cut(s)	126, 292, 298, 480, 549, 940, 1311, 1992
BstDEI	CTNAG	6 cut(s)	318, 632, 908, 1496, 1800, 1824
BstDSI	CCRYGG	1 cut(s)	73
BstF5I	GGATG	7 cut(s)	801, 850, 1056, 1360, 1432, 1759, 1786
BstFNI	CGCG	6 cut(s)	159, 224, 231, 674, 758, 1835
BstH2I	RGCGCY	5 cut(s)	138, 192, 237, 297, 648
BstHHI	GCGC	9 cut(s)	137, 191, 236, 296, 591, 647, 758, 889, 1360
BstMAI	GTCTC	4 cut(s)	492, 560, 1262, 1432
BstMCI	CGRYCG	1 cut(s)	154
BstNI	CCWGG	3 cut(s)	182, 1295, 1866
BstNSI	RCATGY	3 cut(s)	508, 1612, 2060
BstSCI	CCNGG	5 cut(s)	180, 236, 804, 1293, 1864
BstSFI	CTRYAG	3 cut(s)	207, 1463, 1992
BstUI	CGCG	6 cut(s)	159, 224, 231, 674, 758, 1835
BstV1I	GCAGC	5 cut(s)	90, 472, 1564, 1816, 2006
BstV2I	GAAGAC	4 cut(s)	335, 347, 716, 1295
BstX2I	RGATCY	1 cut(s)	364
BstXI	CCANNNNNNTGG	1 cut(s)	103
BstYI	RGATCY	1 cut(s)	364
Bsu36I	CCTNAGG	1 cut(s)	1496
BsuRI	GGCC	6 cut(s)	449, 804, 1161, 1399, 1535, 1864
BtgI	CCRYGG	1 cut(s)	73
BtsCI	GGATG	7 cut(s)	801, 850, 1056, 1360, 1432, 1759, 1786
BtsIMutI	CAGTG	3 cut(s)	908, 1385, 1748
BveI	ACCTGC	1 cut(s)	678
Cac8I	GCNNGC	8 cut(s)	126, 292, 298, 480, 549, 940, 1311, 1992
CaiI	CAGNNNCTG	2 cut(s)	907, 1765
CfoI	GCGC	9 cut(s)	137, 191, 236, 296, 591, 647, 758, 889, 1360
Cfr10I	RCCGGY	3 cut(s)	290, 296, 547
Cfr13I	GGNCC	5 cut(s)	595, 690, 730, 766, 802
CseI	GACGC	2 cut(s)	540, 663
Csp6I	GTAC	1 cut(s)	865
CviAII	CATG	5 cut(s)	433, 505, 1325, 1609, 2057
CviQI	GTAC	1 cut(s)	865
DdeI	CTNAG	6 cut(s)	318, 632, 908, 1496, 1800, 1824
DinI	GGCGCC	3 cut(s)	235, 295, 646
EaeI	YGGCCR	1 cut(s)	447
Eam1104I	CTCTTC	4 cut(s)	1094, 1425, 1595, 1703
EarI	CTCTTC	4 cut(s)	1094, 1425, 1595, 1703
EciI	GGCGGA	3 cut(s)	357, 497, 825
Eco130I	CCWWGG	2 cut(s)	1400, 1776
Eco147I	AGGCCT	1 cut(s)	1864
Eco31I	GGTCTC	1 cut(s)	560
Eco47I	GGWCC	4 cut(s)	595, 690, 730, 766
Eco57I	CTGAAG	2 cut(s)	84, 728
Eco81I	CCTNAGG	1 cut(s)	1496
Eco88I	CYCGRG	1 cut(s)	737
EcoO109I	RGGNCCY	2 cut(s)	595, 766
EcoRII	CCWGG	3 cut(s)	180, 1293, 1864
EcoT14I	CCWWGG	2 cut(s)	1400, 1776
EgeI	GGCGCC	3 cut(s)	235, 295, 646
EheI	GGCGCC	3 cut(s)	235, 295, 646
ErhI	CCWWGG	2 cut(s)	1400, 1776
FaeI	CATG	5 cut(s)	436, 508, 1328, 1612, 2060
FalI	AAGNNNNNCTT	4 cut(s)	8, 40, 1236, 1268
FaqI	GGGAC	3 cut(s)	752, 761, 1534
FatI	CATG	5 cut(s)	432, 504, 1324, 1608, 2056
FauI	CCCGC	5 cut(s)	229, 293, 741, 751, 957
FbaI	TGATCA	3 cut(s)	1191, 1660, 1972
FblI	GTMKAC	1 cut(s)	628
FokI	GGATG	7 cut(s)	808, 857, 1063, 1367, 1439, 1766, 1793
FspBI	CTAG	2 cut(s)	720, 1860
GlaI	GCGC	9 cut(s)	136, 190, 235, 295, 590, 646, 757, 888, 1359
GsaI	CCCAGC	1 cut(s)	1476
GsuI	CTGGAG	1 cut(s)	884
HaeII	RGCGCY	5 cut(s)	138, 192, 237, 297, 648
HaeIII	GGCC	6 cut(s)	449, 804, 1161, 1399, 1535, 1864
HapII	CCGG	7 cut(s)	42, 237, 291, 297, 414, 548, 805
HgaI	GACGC	2 cut(s)	540, 663
HhaI	GCGC	9 cut(s)	137, 191, 236, 296, 591, 647, 758, 889, 1360
Hin1I	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
Hin1II	CATG	5 cut(s)	436, 508, 1328, 1612, 2060
Hin6I	GCGC	9 cut(s)	135, 189, 234, 294, 589, 645, 756, 887, 1358
HinP1I	GCGC	9 cut(s)	135, 189, 234, 294, 589, 645, 756, 887, 1358
HincII	GTYRAC	1 cut(s)	629
HindII	GTYRAC	1 cut(s)	629
HpaII	CCGG	7 cut(s)	42, 237, 291, 297, 414, 548, 805
HphI	GGTGA	6 cut(s)	101, 349, 827, 1297, 1799, 1805
Hpy166II	GTNNAC	2 cut(s)	47, 629
Hpy188I	TCNGA	8 cut(s)	64, 151, 321, 492, 556, 694, 1143, 1347
Hpy8I	GTNNAC	2 cut(s)	47, 629
HpyAV	CCTTC	6 cut(s)	34, 265, 1192, 1201, 1524, 1525
HpyCH4III	ACNGT	3 cut(s)	1148, 1389, 1940
HpyCH4IV	ACGT	3 cut(s)	558, 616, 651
HpyCH4V	TGCA	9 cut(s)	397, 942, 1421, 1508, 1580, 1669, 1909, 1919, 1994
HpyF3I	CTNAG	6 cut(s)	318, 632, 908, 1496, 1800, 1824
HpySE526I	ACGT	3 cut(s)	558, 616, 651
Hsp92I	GRCGYC	7 cut(s)	234, 294, 551, 558, 616, 645, 651
Hsp92II	CATG	5 cut(s)	436, 508, 1328, 1612, 2060
HspAI	GCGC	9 cut(s)	135, 189, 234, 294, 589, 645, 756, 887, 1358
KasI	GGCGCC	3 cut(s)	233, 293, 644
KflI	GGGWCCC	1 cut(s)	766
KroI	GCCGGC	3 cut(s)	290, 296, 547
KroNI	GCCGGC	3 cut(s)	292, 298, 549
Ksp22I	TGATCA	3 cut(s)	1191, 1660, 1972
LmnI	GCTCC	5 cut(s)	44, 96, 282, 903, 1874
Lsp1109I	GCAGC	5 cut(s)	90, 472, 1564, 1816, 2006
LweI	GCATC	2 cut(s)	1345, 1747
MaeI	CTAG	2 cut(s)	720, 1860
MaeII	ACGT	3 cut(s)	558, 616, 651
MaeIII	GTNAC	3 cut(s)	635, 815, 1237
MfeI	CAATTG	1 cut(s)	1656
MflI	RGATCY	1 cut(s)	364
MhlI	GDGCHC	2 cut(s)	665, 2043
MluCI	AATT	7 cut(s)	878, 983, 1011, 1059, 1656, 2004, 2048
MluI	ACGCGT	1 cut(s)	672
Mly113I	GGCGCC	3 cut(s)	234, 294, 645
MlyI	GAGTC	5 cut(s)	260, 413, 494, 581, 886
MmeI	TCCRAC	4 cut(s)	174, 408, 534, 1028
MreI	CGCCGGCG	2 cut(s)	296, 547
MroNI	GCCGGC	3 cut(s)	290, 296, 547
MroXI	GAANNNNTTC	1 cut(s)	23
MseI	TTAA	4 cut(s)	681, 1365, 1925, 2051
MslI	CAYNNNNRTG	1 cut(s)	2061
MspA1I	CMGCKG	1 cut(s)	478
MspI	CCGG	7 cut(s)	42, 237, 291, 297, 414, 548, 805
MspR9I	CCNGG	5 cut(s)	182, 238, 806, 1295, 1866
MunI	CAATTG	1 cut(s)	1656
Mva1269I	GAATGC	2 cut(s)	1474, 1919
MvaI	CCWGG	3 cut(s)	182, 1295, 1866
MvnI	CGCG	6 cut(s)	159, 224, 231, 674, 758, 1835
NaeI	GCCGGC	3 cut(s)	292, 298, 549
NarI	GGCGCC	3 cut(s)	234, 294, 645
NciI	CCSGG	2 cut(s)	238, 806
NgoMIV	GCCGGC	3 cut(s)	290, 296, 547
NlaIII	CATG	5 cut(s)	436, 508, 1328, 1612, 2060
NmeAIII	GCCGAG	2 cut(s)	475, 589
NmuCI	GTSAC	3 cut(s)	635, 815, 1237
NspI	RCATGY	3 cut(s)	508, 1612, 2060
PceI	AGGCCT	1 cut(s)	1864
PciI	ACATGT	1 cut(s)	2056
PcsI	WCGNNNNNNNCGW	9 cut(s)	81, 147, 174, 533, 567, 625, 645, 671, 674
PctI	GAATGC	2 cut(s)	1474, 1919
PdiI	GCCGGC	3 cut(s)	292, 298, 549
PdmI	GAANNNNTTC	1 cut(s)	23
PfeI	GAWTC	6 cut(s)	143, 973, 1224, 1348, 1762, 1769
PflFI	GACNNNGTC	2 cut(s)	571, 715
PleI	GAGTC	5 cut(s)	259, 413, 493, 580, 886
PluTI	GGCGCC	3 cut(s)	237, 297, 648
PpsI	GAGTC	5 cut(s)	259, 413, 493, 580, 886
PpuMI	RGGWCCY	2 cut(s)	595, 766
PscI	ACATGT	1 cut(s)	2056
Psp5II	RGGWCCY	2 cut(s)	595, 766
Psp6I	CCWGG	3 cut(s)	180, 1293, 1864
PspFI	CCCAGC	1 cut(s)	1472
PspGI	CCWGG	3 cut(s)	180, 1293, 1864
PspPI	GGNCC	5 cut(s)	595, 690, 730, 766, 802
PspPPI	RGGWCCY	2 cut(s)	595, 766
PstI	CTGCAG	1 cut(s)	1996
PstNI	CAGNNNCTG	2 cut(s)	907, 1765
PsuI	RGATCY	1 cut(s)	364
PsyI	GACNNNGTC	2 cut(s)	571, 715
RsaI	GTAC	1 cut(s)	866
RsaNI	GTAC	1 cut(s)	865
RseI	CAYNNNNRTG	1 cut(s)	2061
SalI	GTCGAC	1 cut(s)	627
SaqAI	TTAA	4 cut(s)	681, 1365, 1925, 2051
Sau96I	GGNCC	5 cut(s)	595, 690, 730, 766, 802
SchI	GAGTC	5 cut(s)	260, 413, 494, 581, 886
ScrFI	CCNGG	5 cut(s)	182, 238, 806, 1295, 1866
SduI	GDGCHC	2 cut(s)	665, 2043
SfaNI	GCATC	2 cut(s)	1345, 1747
SfcI	CTRYAG	3 cut(s)	207, 1463, 1992
SfoI	GGCGCC	3 cut(s)	235, 295, 646
SgrAI	CRCCGGYG	2 cut(s)	296, 547
SinI	GGWCC	4 cut(s)	595, 690, 730, 766
SmiMI	CAYNNNNRTG	1 cut(s)	2061
SmlI	CTYRAG	2 cut(s)	14, 1229
SmoI	CTYRAG	2 cut(s)	14, 1229
Sse9I	AATT	7 cut(s)	878, 983, 1011, 1059, 1656, 2004, 2048
SseBI	AGGCCT	1 cut(s)	1864
SspDI	GGCGCC	3 cut(s)	233, 293, 644
SspI	AATATT	1 cut(s)	2032
SspMI	CTAG	2 cut(s)	720, 1860
StuI	AGGCCT	1 cut(s)	1864
StyD4I	CCNGG	5 cut(s)	180, 236, 804, 1293, 1864
StyI	CCWWGG	2 cut(s)	1400, 1776
TaaI	ACNGT	3 cut(s)	1148, 1389, 1940
TaiI	ACGT	3 cut(s)	561, 619, 654
TaqI	TCGA	8 cut(s)	141, 177, 374, 509, 628, 668, 1022, 1935
TaqII	GACCGA	1 cut(s)	584
TasI	AATT	7 cut(s)	878, 983, 1011, 1059, 1656, 2004, 2048
TatI	WGTACW	1 cut(s)	864
TfiI	GAWTC	6 cut(s)	143, 973, 1224, 1348, 1762, 1769
Tru1I	TTAA	4 cut(s)	681, 1365, 1925, 2051
Tru9I	TTAA	4 cut(s)	681, 1365, 1925, 2051
TscAI	CASTG	3 cut(s)	908, 1392, 1755
TseFI	GTSAC	3 cut(s)	635, 815, 1237
TseI	GCWGC	5 cut(s)	78, 460, 1577, 1829, 1994
Tsp45I	GTSAC	3 cut(s)	635, 815, 1237
TspDTI	ATGAA	8 cut(s)	986, 1078, 1305, 1443, 1721, 1733, 1942, 1957
TspGWI	ACGGA	1 cut(s)	359
TspRI	CASTG	3 cut(s)	908, 1392, 1755
Tth111I	GACNNNGTC	2 cut(s)	571, 715
VpaK11BI	GGWCC	4 cut(s)	595, 690, 730, 766
XapI	RAATTY	2 cut(s)	878, 2004
XbaI	TCTAGA	1 cut(s)	719
XceI	RCATGY	3 cut(s)	508, 1612, 2060
XmiI	GTMKAC	1 cut(s)	628
XmnI	GAANNNNTTC	1 cut(s)	23
XspI	CTAG	2 cut(s)	720, 1860
ZraI	GACGTC	3 cut(s)	559, 617, 652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.