Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0001376

Physical Location & Seq

Genomic Coordinates Forward (+)

61523022 .. 61526435

Gene Structure 3414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG438000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGCACAGAGACCAGAACAAGTGGAAGTCGAGGTCGACGGTACCGGAGAAAGAAGCCCGAGAAACACAGTTGGTGGGGAGTCTTTCCGGCGAAGAAGCAAAGATCAGGTACCGGAGGCTGCACCCAACTCGGGTGGACCTCGGGTTCTGAGGTGTAGCTCAAGCGCTTCGTTTTCTAGTAAAGGTTGGAAACCCCCAATGAGCAAGACCAGGTCGAGGCTTATTGACCCACTTGAGGAACGGTGTCCCAAATCAGATAGGTTGGTCCATTCCGGACGACTGGTCGGAAAAGATGAAGAGGACGATGGTTTTGACGTTGATGATATACCCGAAGAGTACAAGAAGATGAAGTTCAACACTCTGACGTTACTTCAATGGGTGAGTCTTGTTTGTGTTTTAGGTGCTTTGGTTTGTAATCTTTGGATTCCGATGATAAGGAGACTAAGGCCGTGGGATCTTCCGATTTGGAAATGGGAGTTGTTGGTTTTGGCATTGATTTGTGGGCGTTTGGTTTCGGGTTGGGGGATTCGGGTGGTTGTGTTCTTTGTGGAGAGAAATTTTCTGATGAGGAAAAGGGTGTTGTATTTTGTTTATGGGTTGAGAAAGGCTGTGCAGAATTGTCTCTGGTTGGGTTTGGTTTTGGTTGTGTGGCATTTGATTTTTGATAAAAAGGTTGAGAAGGAGACCAAGAGTAGGATCTTACCTTATGTGACTAGGACACTAGTGTGTTTTCTGGTTGCTACTTTGATTTGGCTTGTGAAAACATTACTTGTCAAGGTCCTTGCTTTGTCTTTCCATGTCAATGCCTTTTTCGAACGAATTCGGGAGGCTTTGTTCAATCAGTATGTGATTGAGACGCTTTCTGGTCCTCCTTTGTTCGAAAGGCAGCAGATACAAGAGGAAGAGGAAAAGGCTGCCGCAGAGATTAGGGAGTTTCAGAAGGCAGGGGCTTGTATGCCTCGCGAGCTCAGGGCAACTCTTCTTCCAAGGAATGGACCGGTTGTGGGGAGTGGTGGACTGCAGAGTAGCCCCACAATCGGGAGGAGTCCTAGATTTTCTTCTACGCCTACAACGCCTAAGTCTGTGAAGCAAGATGAGGAGATCCCAGTTAACCACTTGAATAAGCTAAATCAGAAGAATGTATCAGCTTGGAATATGAGGCGAATGATGAATATCATCCGGCACGGCTCCTTAACCACTCTAGATGAACAGATACTGGATGTTGAGGACGACTCTTCTGTGGAGATCAAAACTGAATGCCAGGCAAAAGAGGCAGCGAGGAAGATATTCCTCAAAGTAGCCAAGCCAGGGGCCAAATGCATTTTCCTTGACGATCTGATGCTTTTTATGAATAAAGATGAAGCCTTGAAGACAATTGTTCTCTTTGGAGCAGCAGGTGAACATGATGGGATCAGCAAGTCTTCTCTTAAACATTGGATGGTGAGAGCATTTAGAGAGAGAAGAGCTCTATCATTGTCTCTCAATGATACGAAAACAGCAGTGGACGAACTCCACAATTTATTAAACATTCTTGTGGGTGTGATCATTGTGATAACCTGGCTGATTATACTTGGGATTCCAATCACCCATTTCCTTGTGTTCATAAGCTCACAGATTCTTTTGGTTGTATTTATCTTTGGGAACACATGCAAGACAGTTTTTGAAGCAATAATCTTTCTGTTCGTAATGCACCCATATGATGTGGGTGATCGTTGTGAGGTGGATGGAGTCCAGGTGAAAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel Pkinase_Tyr

Protein Analysis

581

Amino Acids

66.04

Weight (kDa)

9.13

Isoelectric Point (pI)

45.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78610 AT2G17010 AT2G17010
fragaria_vesca	FvH4_2g15780 FvH4_2g37870 FvH4_2g37870 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430 FvH4_3g39430
malus_domestica	MD05G1126700.v1.1 MD08G1006800.v1.1 MD08G1006900.v1.1 MD10G1129900.v1.1
prunus_persica	Prupe.1G358700_v2.0.a1 Prupe.8G170400_v2.0.a1
pyrus_communis	pycom05g12260 pycom08g00530 pycom08g00560 pycom08g00580
rosa_chinensis	RchiOBHm_Chr5g0071021 RchiOBHm_Chr6g0279131 RchiOBHm_Chr6g0303751
rosa_laevigata	RLG00000011049 RLG00000013165 RLG00000036184
rosa_multiflora	Rmu_co8207138.1_g000001 Rmu_co8395065.1_g000001 Rmu_sc0001141.1_g000023 Rmu_sc0012878.1_g000006 Rmu_sc0014203.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010020 Rroxscaffold_7G00164430 Rroxscaffold_7G00189100
rosa_rugosa	Rorug05G0409800 Rorug05G0409900 Rorug05G0410000 Rorug06G0122500 Rorug06G0324500
rosa_samantha	Rh5AG466100 Rh5BG484300 Rh5CG508900 Rh5DG495700 Rh6AG231300 Rh6AG438800 Rh6BG236200 Rh6BG464300 Rh6CG238200 Rh6CG451100 Rh6DG229800 Rh6DG438000
rosa_wichuraiana	Rw5G043280 Rw6G037990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1385
Acc36I	ACCTGC	1 cut(s)	1385
Acc65I	GGTACC	2 cut(s)	41, 109
AccB1I	GGYRCC	2 cut(s)	41, 109
AccB7I	CCANNNNNTGG	1 cut(s)	992
AccI	GTMKAC	1 cut(s)	36
AccII	CGCG	1 cut(s)	963
AccIII	TCCGGA	1 cut(s)	272
AciI	CCGC	1 cut(s)	918
AclWI	GGATC	4 cut(s)	462, 704, 1096, 1418
AcsI	RAATTY	2 cut(s)	556, 819
AfaI	GTAC	3 cut(s)	43, 111, 338
AfeI	AGCGCT	1 cut(s)	166
AfiI	CCNNNNNNNGG	9 cut(s)	131, 216, 235, 693, 992, 1004, 1037, 1038, 1308
AgeI	ACCGGT	1 cut(s)	997
AgsI	TTSAA	6 cut(s)	355, 374, 838, 1120, 1369, 1664
AhdI	GACNNNNNGTC	1 cut(s)	281
AhlI	ACTAGT	1 cut(s)	721
AjnI	CCWGG	5 cut(s)	209, 1260, 1306, 1556, 1731
AjuI	GAANNNNNNNTTGG	2 cut(s)	1307, 1339
AleI	CACNNNNGTG	1 cut(s)	724
AloI	GAACNNNNNNTCC	4 cut(s)	129, 161, 818, 850
AluBI	AGCT	6 cut(s)	159, 967, 1126, 1148, 1466, 1608
AluI	AGCT	6 cut(s)	159, 967, 1126, 1148, 1466, 1608
Alw21I	GWGCWC	2 cut(s)	969, 1468
Alw26I	GTCTC	6 cut(s)	4, 433, 626, 677, 848, 1482
AlwI	GGATC	4 cut(s)	462, 704, 1096, 1418
AlwNI	CAGNNNCTG	1 cut(s)	1216
Ama87I	CYCGRG	3 cut(s)	58, 130, 141
Aor13HI	TCCGGA	1 cut(s)	272
Aor51HI	AGCGCT	1 cut(s)	166
AoxI	GGCC	2 cut(s)	446, 1311
ApeKI	GCWGC	5 cut(s)	119, 886, 914, 1274, 1391
ApoI	RAATTY	2 cut(s)	556, 819
ArsI	GACNNNNNNTTYG	2 cut(s)	293, 325
AsiGI	ACCGGT	1 cut(s)	997
Asp700I	GAANNNNTTC	2 cut(s)	819, 1286
Asp718I	GGTACC	2 cut(s)	41, 109
AspLEI	GCGC	1 cut(s)	167
AspS9I	GGNCC	6 cut(s)	137, 265, 778, 866, 995, 1311
AsuHPI	GGTGA	5 cut(s)	391, 1409, 1453, 1576, 1718
AsuII	TTCGAA	2 cut(s)	813, 879
AvaI	CYCGRG	3 cut(s)	58, 130, 141
AvaII	GGWCC	5 cut(s)	137, 265, 778, 866, 995
BanI	GGYRCC	2 cut(s)	41, 109
BanII	GRGCYC	2 cut(s)	969, 1468
BbsI	GAAGAC	2 cut(s)	1376, 1413
Bbv12I	GWGCWC	2 cut(s)	969, 1468
BbvI	GCAGC	5 cut(s)	106, 898, 901, 1286, 1403
BccI	CCATC	4 cut(s)	299, 1400, 1432, 1718
BceAI	ACGGC	2 cut(s)	433, 1201
BcgI	CGANNNNNNTGC	2 cut(s)	111, 145
BciT130I	CCWGG	5 cut(s)	211, 1262, 1308, 1558, 1733
BclI	TGATCA	1 cut(s)	1542
BcoDI	GTCTC	6 cut(s)	4, 433, 626, 677, 848, 1482
BcuI	ACTAGT	1 cut(s)	721
BfaI	CTAG	5 cut(s)	177, 714, 722, 1050, 1202
BfmI	CTRYAG	1 cut(s)	1019
BfoI	RGCGCY	1 cut(s)	168
BfuAI	ACCTGC	1 cut(s)	1385
BisI	GCNGC	6 cut(s)	120, 887, 915, 918, 1275, 1392
BlsI	GCNGC	6 cut(s)	121, 888, 916, 919, 1276, 1393
Bme1390I	CCNGG	5 cut(s)	211, 1262, 1308, 1558, 1733
Bme18I	GGWCC	5 cut(s)	137, 265, 778, 866, 995
BmeRI	GACNNNNNGTC	1 cut(s)	281
BmeT110I	CYCGRG	3 cut(s)	58, 130, 141
BmgT120I	GGNCC	6 cut(s)	137, 265, 778, 866, 995, 1311
BmiI	GGNNCC	4 cut(s)	43, 111, 1189, 1312
BmrFI	CCNGG	5 cut(s)	211, 1262, 1308, 1558, 1733
BmrI	ACTGGG	1 cut(s)	1100
BmsI	GCATC	1 cut(s)	1329
BmuI	ACTGGG	1 cut(s)	1100
BpiI	GAAGAC	2 cut(s)	1376, 1413
BplI	GAGNNNNNCTC	4 cut(s)	1217, 1249, 1450, 1482
Bpu10I	CCTNAGC	1 cut(s)	968
Bpu14I	TTCGAA	2 cut(s)	813, 879
BpuEI	CTTGAG	2 cut(s)	145, 254
BsaBI	GATNNNNATC	2 cut(s)	1172, 1580
BsaI	GGTCTC	2 cut(s)	4, 677
BsaJI	CCNNGG	4 cut(s)	140, 449, 986, 1307
BsaWI	WCCGGW	4 cut(s)	44, 112, 272, 997
BsaXI	ACNNNNNCTCC	3 cut(s)	818, 848, 1719
Bsc4I	CCNNNNNNNGG	9 cut(s)	131, 216, 235, 693, 992, 1004, 1037, 1038, 1308
Bse118I	RCCGGY	1 cut(s)	997
Bse1I	ACTGG	3 cut(s)	285, 1106, 1221
Bse8I	GATNNNNATC	2 cut(s)	1172, 1580
BseAI	TCCGGA	1 cut(s)	272
BseBI	CCWGG	5 cut(s)	211, 1262, 1308, 1558, 1733
BseDI	CCNNGG	4 cut(s)	140, 449, 986, 1307
BseGI	GGATG	4 cut(s)	1176, 1225, 1443, 1729
BseJI	GATNNNNATC	2 cut(s)	1172, 1580
BseLI	CCNNNNNNNGG	9 cut(s)	131, 216, 235, 693, 992, 1004, 1037, 1038, 1308
BseMII	CTCAG	2 cut(s)	140, 982
BseNI	ACTGG	3 cut(s)	285, 1106, 1221
BseRI	GAGGAG	2 cut(s)	1057, 1112
BseXI	GCAGC	5 cut(s)	106, 898, 901, 1286, 1403
BsgI	GTGCAG	2 cut(s)	105, 632
Bsh1236I	CGCG	1 cut(s)	963
BshFI	GGCC	2 cut(s)	448, 1313
BshNI	GGYRCC	2 cut(s)	41, 109
BshTI	ACCGGT	1 cut(s)	997
BsiHKAI	GWGCWC	2 cut(s)	969, 1468
BsiHKCI	CYCGRG	3 cut(s)	58, 130, 141
BsiSI	CCGG	6 cut(s)	45, 88, 113, 273, 998, 1180
BslFI	GGGAC	1 cut(s)	231
BslI	CCNNNNNNNGG	9 cut(s)	131, 216, 235, 693, 992, 1004, 1037, 1038, 1308
BsmAI	GTCTC	6 cut(s)	4, 433, 626, 677, 848, 1482
BsmBI	CGTCTC	1 cut(s)	848
BsmFI	GGGAC	1 cut(s)	231
BsmI	GAATGC	1 cut(s)	1262
BsnI	GGCC	2 cut(s)	448, 1313
Bso31I	GGTCTC	2 cut(s)	4, 677
BsoBI	CYCGRG	3 cut(s)	58, 130, 141
Bsp119I	TTCGAA	2 cut(s)	813, 879
Bsp1286I	GDGCHC	2 cut(s)	969, 1468
Bsp13I	TCCGGA	1 cut(s)	272
Bsp143I	GATC	9 cut(s)	103, 454, 696, 1101, 1245, 1333, 1410, 1542, 1708
Bsp68I	TCGCGA	1 cut(s)	963
BspACI	CCGC	1 cut(s)	918
BspANI	GGCC	2 cut(s)	448, 1313
BspCNI	CTCAG	2 cut(s)	141, 981
BspEI	TCCGGA	1 cut(s)	272
BspFNI	CGCG	1 cut(s)	963
BspLI	GGNNCC	4 cut(s)	43, 111, 1189, 1312
BspMAI	CTGCAG	1 cut(s)	1023
BspMI	ACCTGC	1 cut(s)	1385
BspPI	GGATC	4 cut(s)	462, 704, 1096, 1418
BspQI	GCTCTTC	1 cut(s)	1456
BspT104I	TTCGAA	2 cut(s)	813, 879
BspT107I	GGYRCC	2 cut(s)	41, 109
BspTNI	GGTCTC	2 cut(s)	4, 677
BsrFI	RCCGGY	1 cut(s)	997
BsrI	ACTGG	3 cut(s)	285, 1106, 1221
BssAI	RCCGGY	1 cut(s)	997
BssECI	CCNNGG	4 cut(s)	140, 449, 986, 1307
BssMI	GATC	9 cut(s)	103, 454, 696, 1101, 1245, 1333, 1410, 1542, 1708
BssT1I	CCWWGG	1 cut(s)	986
Bst2UI	CCWGG	5 cut(s)	211, 1262, 1308, 1558, 1733
Bst4CI	ACNGT	4 cut(s)	41, 70, 243, 1657
Bst6I	CTCTTC	6 cut(s)	291, 327, 897, 984, 1240, 1456
BstBI	TTCGAA	2 cut(s)	813, 879
BstC8I	GCNNGC	1 cut(s)	965
BstDEI	CTNAG	4 cut(s)	149, 443, 968, 1077
BstDSI	CCRYGG	1 cut(s)	449
BstF5I	GGATG	4 cut(s)	1176, 1225, 1443, 1729
BstFNI	CGCG	1 cut(s)	963
BstH2I	RGCGCY	1 cut(s)	168
BstHHI	GCGC	1 cut(s)	167
BstKTI	GATC	9 cut(s)	106, 457, 699, 1104, 1248, 1336, 1413, 1545, 1711
BstMAI	GTCTC	6 cut(s)	4, 433, 626, 677, 848, 1482
BstMBI	GATC	9 cut(s)	103, 454, 696, 1101, 1245, 1333, 1410, 1542, 1708
BstMWI	GCNNNNNNNGC	3 cut(s)	964, 1072, 1271
BstNI	CCWGG	5 cut(s)	211, 1262, 1308, 1558, 1733
BstNSI	RCATGY	1 cut(s)	1650
BstSCI	CCNGG	5 cut(s)	209, 1260, 1306, 1556, 1731
BstSFI	CTRYAG	1 cut(s)	1019
BstUI	CGCG	1 cut(s)	963
BstV1I	GCAGC	5 cut(s)	106, 898, 901, 1286, 1403
BstV2I	GAAGAC	2 cut(s)	1376, 1413
BstX2I	RGATCY	3 cut(s)	454, 696, 1101
BstYI	RGATCY	3 cut(s)	454, 696, 1101
BsuRI	GGCC	2 cut(s)	448, 1313
BtgI	CCRYGG	1 cut(s)	449
BtsCI	GGATG	4 cut(s)	1176, 1225, 1443, 1729
BtsI	GCAGTG	1 cut(s)	1506
BtsIMutI	CAGTG	1 cut(s)	1506
BtuMI	TCGCGA	1 cut(s)	963
BveI	ACCTGC	1 cut(s)	1385
Cac8I	GCNNGC	1 cut(s)	965
CaiI	CAGNNNCTG	1 cut(s)	1216
CfoI	GCGC	1 cut(s)	167
Cfr10I	RCCGGY	1 cut(s)	997
Cfr13I	GGNCC	6 cut(s)	137, 265, 778, 866, 995, 1311
CseI	GACGC	1 cut(s)	865
CsiI	ACCWGGT	1 cut(s)	209
Csp6I	GTAC	3 cut(s)	42, 110, 337
CspAI	ACCGGT	1 cut(s)	997
CspCI	CAANNNNNGTGG	2 cut(s)	115, 150
CviAII	CATG	3 cut(s)	797, 1403, 1647
CviQI	GTAC	3 cut(s)	42, 110, 337
DdeI	CTNAG	4 cut(s)	149, 443, 968, 1077
DpnI	GATC	9 cut(s)	105, 456, 698, 1103, 1247, 1335, 1412, 1544, 1710
DpnII	GATC	9 cut(s)	103, 454, 696, 1101, 1245, 1333, 1410, 1542, 1708
DriI	GACNNNNNGTC	1 cut(s)	281
Eam1104I	CTCTTC	6 cut(s)	291, 327, 897, 984, 1240, 1456
Eam1105I	GACNNNNNGTC	1 cut(s)	281
EarI	CTCTTC	6 cut(s)	291, 327, 897, 984, 1240, 1456
Ecl136II	GAGCTC	2 cut(s)	967, 1466
Eco130I	CCWWGG	1 cut(s)	986
Eco24I	GRGCYC	2 cut(s)	969, 1468
Eco31I	GGTCTC	2 cut(s)	4, 677
Eco47I	GGWCC	5 cut(s)	137, 265, 778, 866, 995
Eco47III	AGCGCT	1 cut(s)	166
Eco53kI	GAGCTC	2 cut(s)	967, 1466
Eco88I	CYCGRG	3 cut(s)	58, 130, 141
EcoICRI	GAGCTC	2 cut(s)	967, 1466
EcoO109I	RGGNCCY	1 cut(s)	778
EcoRI	GAATTC	1 cut(s)	819
EcoRII	CCWGG	5 cut(s)	209, 1260, 1306, 1556, 1731
EcoT14I	CCWWGG	1 cut(s)	986
EcoT22I	ATGCAT	1 cut(s)	1322
EcoT38I	GRGCYC	2 cut(s)	969, 1468
ErhI	CCWWGG	1 cut(s)	986
Esp3I	CGTCTC	1 cut(s)	848
FaeI	CATG	3 cut(s)	800, 1406, 1650
FaqI	GGGAC	1 cut(s)	231
FatI	CATG	3 cut(s)	796, 1402, 1646
FauNDI	CATATG	1 cut(s)	1696
FbaI	TGATCA	1 cut(s)	1542
FblI	GTMKAC	1 cut(s)	36
Fnu4HI	GCNGC	6 cut(s)	120, 887, 915, 918, 1275, 1392
FokI	GGATG	4 cut(s)	1163, 1232, 1450, 1736
FriOI	GRGCYC	2 cut(s)	969, 1468
Fsp4HI	GCNGC	6 cut(s)	120, 887, 915, 918, 1275, 1392
FspBI	CTAG	5 cut(s)	177, 714, 722, 1050, 1202
GlaI	GCGC	1 cut(s)	166
GluI	GCNGC	6 cut(s)	120, 887, 915, 918, 1275, 1392
HaeII	RGCGCY	1 cut(s)	168
HaeIII	GGCC	2 cut(s)	448, 1313
HapII	CCGG	6 cut(s)	45, 88, 113, 273, 998, 1180
HgaI	GACGC	1 cut(s)	865
HhaI	GCGC	1 cut(s)	167
Hin1II	CATG	3 cut(s)	800, 1406, 1650
Hin6I	GCGC	1 cut(s)	165
HinP1I	GCGC	1 cut(s)	165
HincII	GTYRAC	2 cut(s)	37, 1111
HindII	GTYRAC	2 cut(s)	37, 1111
HinfI	GANTC	9 cut(s)	80, 382, 424, 526, 1045, 1232, 1576, 1615, 1728
HpaI	GTTAAC	1 cut(s)	1111
HpaII	CCGG	6 cut(s)	45, 88, 113, 273, 998, 1180
HphI	GGTGA	5 cut(s)	391, 1409, 1453, 1576, 1718
Hpy166II	GTNNAC	6 cut(s)	37, 137, 1016, 1111, 1400, 1504
Hpy188III	TCNNGA	5 cut(s)	273, 824, 962, 1039, 1202
Hpy8I	GTNNAC	6 cut(s)	37, 137, 1016, 1111, 1400, 1504
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	2 cut(s)	673, 934
HpyCH4III	ACNGT	4 cut(s)	41, 70, 243, 1657
HpyCH4IV	ACGT	2 cut(s)	315, 365
HpyCH4V	TGCA	6 cut(s)	122, 613, 1021, 1320, 1650, 1690
HpyF10VI	GCNNNNNNNGC	3 cut(s)	964, 1072, 1271
HpyF3I	CTNAG	4 cut(s)	149, 443, 968, 1077
HpySE526I	ACGT	2 cut(s)	315, 365
Hsp92II	CATG	3 cut(s)	800, 1406, 1650
HspAI	GCGC	1 cut(s)	165
Kpn2I	TCCGGA	1 cut(s)	272
KpnI	GGTACC	2 cut(s)	45, 113
Ksp22I	TGATCA	1 cut(s)	1542
KspAI	GTTAAC	1 cut(s)	1111
Kzo9I	GATC	9 cut(s)	103, 454, 696, 1101, 1245, 1333, 1410, 1542, 1708
LguI	GCTCTTC	1 cut(s)	1456
LmnI	GCTCC	2 cut(s)	1193, 1388
Lsp1109I	GCAGC	5 cut(s)	106, 898, 901, 1286, 1403
LweI	GCATC	1 cut(s)	1329
MabI	ACCWGGT	1 cut(s)	209
MaeI	CTAG	5 cut(s)	177, 714, 722, 1050, 1202
MaeII	ACGT	2 cut(s)	315, 365
MaeIII	GTNAC	2 cut(s)	366, 709
MalI	GATC	9 cut(s)	105, 456, 698, 1103, 1247, 1335, 1412, 1544, 1710
MboI	GATC	9 cut(s)	103, 454, 696, 1101, 1245, 1333, 1410, 1542, 1708
MfeI	CAATTG	1 cut(s)	1374
MflI	RGATCY	3 cut(s)	454, 696, 1101
MhlI	GDGCHC	2 cut(s)	969, 1468
MluCI	AATT	5 cut(s)	556, 616, 819, 1374, 1516
MlyI	GAGTC	5 cut(s)	89, 391, 1054, 1226, 1737
MmeI	TCCRAC	2 cut(s)	167, 265
Mph1103I	ATGCAT	1 cut(s)	1322
MroI	TCCGGA	1 cut(s)	272
MroXI	GAANNNNTTC	2 cut(s)	819, 1286
MseI	TTAA	5 cut(s)	1110, 1193, 1428, 1523, 1744
MslI	CAYNNNNRTG	4 cut(s)	724, 801, 1532, 1695
MspI	CCGG	6 cut(s)	45, 88, 113, 273, 998, 1180
MspR9I	CCNGG	5 cut(s)	211, 1262, 1308, 1558, 1733
MunI	CAATTG	1 cut(s)	1374
Mva1269I	GAATGC	1 cut(s)	1262
MvaI	CCWGG	5 cut(s)	211, 1262, 1308, 1558, 1733
MvnI	CGCG	1 cut(s)	963
MwoI	GCNNNNNNNGC	3 cut(s)	964, 1072, 1271
NdeI	CATATG	1 cut(s)	1696
NdeII	GATC	9 cut(s)	103, 454, 696, 1101, 1245, 1333, 1410, 1542, 1708
NlaIII	CATG	3 cut(s)	800, 1406, 1650
NlaIV	GGNNCC	4 cut(s)	43, 111, 1189, 1312
NmuCI	GTSAC	1 cut(s)	709
NruI	TCGCGA	1 cut(s)	963
NsiI	ATGCAT	1 cut(s)	1322
NspI	RCATGY	1 cut(s)	1650
NspV	TTCGAA	2 cut(s)	813, 879
OliI	CACNNNNGTG	1 cut(s)	724
PaqCI	CACCTGC	1 cut(s)	1385
PciSI	GCTCTTC	1 cut(s)	1456
PctI	GAATGC	1 cut(s)	1262
PdmI	GAANNNNTTC	2 cut(s)	819, 1286
PfeI	GAWTC	4 cut(s)	424, 526, 1576, 1615
PflFI	GACNNNGTC	1 cut(s)	211
PflMI	CCANNNNNTGG	1 cut(s)	992
PinAI	ACCGGT	1 cut(s)	997
PkrI	GCNGC	6 cut(s)	121, 888, 916, 919, 1276, 1393
PleI	GAGTC	5 cut(s)	88, 390, 1053, 1226, 1736
PpsI	GAGTC	5 cut(s)	88, 390, 1053, 1226, 1736
PpuMI	RGGWCCY	1 cut(s)	778
Psp124BI	GAGCTC	2 cut(s)	969, 1468
Psp5II	RGGWCCY	1 cut(s)	778
Psp6I	CCWGG	5 cut(s)	209, 1260, 1306, 1556, 1731
PspGI	CCWGG	5 cut(s)	209, 1260, 1306, 1556, 1731
PspN4I	GGNNCC	4 cut(s)	43, 111, 1189, 1312
PspPI	GGNCC	6 cut(s)	137, 265, 778, 866, 995, 1311
PspPPI	RGGWCCY	1 cut(s)	778
PstI	CTGCAG	1 cut(s)	1023
PstNI	CAGNNNCTG	1 cut(s)	1216
PsuI	RGATCY	3 cut(s)	454, 696, 1101
PsyI	GACNNNGTC	1 cut(s)	211
RruI	TCGCGA	1 cut(s)	963
RsaI	GTAC	3 cut(s)	43, 111, 338
RsaNI	GTAC	3 cut(s)	42, 110, 337
RseI	CAYNNNNRTG	4 cut(s)	724, 801, 1532, 1695
SacI	GAGCTC	2 cut(s)	969, 1468
SalI	GTCGAC	1 cut(s)	35
SapI	GCTCTTC	1 cut(s)	1456
SaqAI	TTAA	5 cut(s)	1110, 1193, 1428, 1523, 1744
SatI	GCNGC	6 cut(s)	120, 887, 915, 918, 1275, 1392
Sau3AI	GATC	9 cut(s)	103, 454, 696, 1101, 1245, 1333, 1410, 1542, 1708
Sau96I	GGNCC	6 cut(s)	137, 265, 778, 866, 995, 1311
SchI	GAGTC	5 cut(s)	89, 391, 1054, 1226, 1737
ScrFI	CCNGG	5 cut(s)	211, 1262, 1308, 1558, 1733
SduI	GDGCHC	2 cut(s)	969, 1468
SexAI	ACCWGGT	1 cut(s)	209
SfaNI	GCATC	1 cut(s)	1329
SfcI	CTRYAG	1 cut(s)	1019
SfuI	TTCGAA	2 cut(s)	813, 879
SinI	GGWCC	5 cut(s)	137, 265, 778, 866, 995
SmiMI	CAYNNNNRTG	4 cut(s)	724, 801, 1532, 1695
SmlI	CTYRAG	2 cut(s)	160, 233
SmoI	CTYRAG	2 cut(s)	160, 233
SpeI	ACTAGT	1 cut(s)	721
Sse9I	AATT	5 cut(s)	556, 616, 819, 1374, 1516
SsiI	CCGC	1 cut(s)	918
SspMI	CTAG	5 cut(s)	177, 714, 722, 1050, 1202
SstI	GAGCTC	2 cut(s)	969, 1468
StyD4I	CCNGG	5 cut(s)	209, 1260, 1306, 1556, 1731
StyI	CCWWGG	1 cut(s)	986
TaaI	ACNGT	4 cut(s)	41, 70, 243, 1657
TaiI	ACGT	2 cut(s)	318, 368
TaqI	TCGA	5 cut(s)	30, 36, 215, 813, 879
TasI	AATT	5 cut(s)	556, 616, 819, 1374, 1516
TatI	WGTACW	1 cut(s)	336
TauI	GCSGC	1 cut(s)	920
TfiI	GAWTC	4 cut(s)	424, 526, 1576, 1615
Tru1I	TTAA	5 cut(s)	1110, 1193, 1428, 1523, 1744
Tru9I	TTAA	5 cut(s)	1110, 1193, 1428, 1523, 1744
TscAI	CASTG	1 cut(s)	1506
TseFI	GTSAC	1 cut(s)	709
TseI	GCWGC	5 cut(s)	119, 886, 914, 1274, 1391
Tsp45I	GTSAC	1 cut(s)	709
TspDTI	ATGAA	7 cut(s)	309, 362, 1184, 1221, 1364, 1374, 1591
TspRI	CASTG	1 cut(s)	1506
Tth111I	GACNNNGTC	1 cut(s)	211
Van91I	CCANNNNNTGG	1 cut(s)	992
VpaK11BI	GGWCC	5 cut(s)	137, 265, 778, 866, 995
XapI	RAATTY	2 cut(s)	556, 819
XbaI	TCTAGA	1 cut(s)	1201
XceI	RCATGY	1 cut(s)	1650
XmiI	GTMKAC	1 cut(s)	36
XmnI	GAANNNNTTC	2 cut(s)	819, 1286
XspI	CTAG	5 cut(s)	177, 714, 722, 1050, 1202
Zsp2I	ATGCAT	1 cut(s)	1322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.