AT2G29420

glutathione s-transferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
12617936 .. 12618899
964 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G29420.1

Sequence Viewer

Length: 684 bp
ATGGCGGAGAGATCAAATTCAGAGGAAGTGAAGCTTTTGGGAATGTGGGCGAGTCCTTTTAGTCGGAGGATTGAGATTGCTCTTACGCTTAAAGGTGTTTCGTATGAGTTCCTGGAGCAAGATATCACAAACAAGAGCTCTTTGTTGCTTCAATTGAATCCGGTTCATAAGATGATTCCGGTTCTTGTTCATAATGGTAAACCGATTTCTGAATCACTTGTGATTCTTGAGTATATTGATGAGACTTGGAGAGACAATCCGATTCTTCCTCAAGATCCGTATGAGAGAACTATGGCTCGATTCTGGTCTAAATTCGTCGATGAACAGATTTATGTGACGGCGATGAAAGTTGTGGGGAAGACCGGAAAAGAGAGAGATGCTGTGGTTGAAGCGACGAGAGATTTGTTGATGTTTTTGGAGAAAGAGCTTGTTGGGAAAGATTTTCTCGGTGGGAAAAGTTTAGGGTTTGTGGATATTGTGGCGACTTTGGTGGCGTTTTGGCTGATGAGAACGGAGGAGATCGTCGGGGTAAAGGTGGTTCCGGTGGAGAAGTTCCCGGAGATACATAGATGGGTTAAGAATTTGTTGGGTAATGATGTTATCAAGAAATGTATTCCTCCTGAAGATGAGCATCTTAAGTACATTAGAGCTCGTATGGAGAAACTCAATATCAAATCTGCTTGA

Protein Analysis

227

Amino Acids

26.11

Weight (kDa)

6.47

Isoelectric Point (pI)

41.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 9 - 81 5.4e-18 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 12 - 82 1.1e-15 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 17 - 82 1e-14 Glutathione S-transferase, N-terminal domain
GST_C PF00043 123 - 196 2.2e-11 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 5
AclWI GGATC 1 cut(s) 269
AcsI RAATTY 3 cut(s) 16, 311, 580
AcuI CTGAAG 1 cut(s) 642
AfaI GTAC 1 cut(s) 641
AflII CTTAAG 1 cut(s) 635
AgsI TTSAA 3 cut(s) 152, 157, 389
AjnI CCWGG 1 cut(s) 111
AluBI AGCT 4 cut(s) 34, 138, 427, 650
AluI AGCT 4 cut(s) 34, 138, 427, 650
Alw21I GWGCWC 2 cut(s) 140, 652
Alw26I GTCTC 2 cut(s) 236, 246
AlwI GGATC 1 cut(s) 269
ApoI RAATTY 3 cut(s) 16, 311, 580
ArsI GACNNNNNNTTYG 2 cut(s) 385, 417
AsuC2I CCSGG 1 cut(s) 557
BanII GRGCYC 2 cut(s) 140, 652
BbsI GAAGAC 1 cut(s) 365
Bbv12I GWGCWC 2 cut(s) 140, 652
BccI CCATC 1 cut(s) 564
BceAI ACGGC 1 cut(s) 354
BciT130I CCWGG 1 cut(s) 113
BcnI CCSGG 1 cut(s) 557
BcoDI GTCTC 2 cut(s) 236, 246
BfrI CTTAAG 1 cut(s) 635
Bme1390I CCNGG 2 cut(s) 113, 557
BmiI GGNNCC 1 cut(s) 540
BmrFI CCNGG 2 cut(s) 113, 557
BmsI GCATC 2 cut(s) 367, 640
BpiI GAAGAC 1 cut(s) 365
BpmI CTGGAG 1 cut(s) 134
BpuEI CTTGAG 2 cut(s) 248, 255
BpuMI CCSGG 1 cut(s) 557
BsaBI GATNNNNATC 1 cut(s) 630
BsaWI WCCGGW 4 cut(s) 160, 178, 362, 541
Bse8I GATNNNNATC 1 cut(s) 630
BseBI CCWGG 1 cut(s) 113
BseJI GATNNNNATC 1 cut(s) 630
BseRI GAGGAG 1 cut(s) 530
BsiHKAI GWGCWC 2 cut(s) 140, 652
BsiSI CCGG 5 cut(s) 161, 179, 363, 542, 557
BsmAI GTCTC 2 cut(s) 236, 246
Bsp1286I GDGCHC 2 cut(s) 140, 652
Bsp143I GATC 3 cut(s) 11, 274, 519
BspACI CCGC 1 cut(s) 5
BspLI GGNNCC 1 cut(s) 540
BspPI GGATC 1 cut(s) 269
BspTI CTTAAG 1 cut(s) 635
BssMI GATC 3 cut(s) 11, 274, 519
Bst2UI CCWGG 1 cut(s) 113
BstAFI CTTAAG 1 cut(s) 635
BstKTI GATC 3 cut(s) 14, 277, 522
BstMAI GTCTC 2 cut(s) 236, 246
BstMBI GATC 3 cut(s) 11, 274, 519
BstNI CCWGG 1 cut(s) 113
BstSCI CCNGG 2 cut(s) 111, 555
BstV2I GAAGAC 1 cut(s) 365
BstX2I RGATCY 1 cut(s) 274
BstYI RGATCY 1 cut(s) 274
BtgZI GCGATG 1 cut(s) 356
Csp6I GTAC 1 cut(s) 640
CviJI RGCY 6 cut(s) 34, 138, 296, 427, 502, 650
CviKI_1 RGCY 6 cut(s) 34, 138, 296, 427, 502, 650
CviQI GTAC 1 cut(s) 640
DpnI GATC 3 cut(s) 13, 276, 521
DpnII GATC 3 cut(s) 11, 274, 519
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 138, 650
Eco24I GRGCYC 2 cut(s) 140, 652
Eco32I GATATC 1 cut(s) 124
Eco53kI GAGCTC 2 cut(s) 138, 650
Eco57I CTGAAG 1 cut(s) 642
EcoICRI GAGCTC 2 cut(s) 138, 650
EcoRII CCWGG 1 cut(s) 111
EcoRV GATATC 1 cut(s) 124
EcoT38I GRGCYC 2 cut(s) 140, 652
FaiI YATR 9 cut(s) 105, 168, 192, 234, 282, 293, 333, 567, 656
FalI AAGNNNNNCTT 2 cut(s) 18, 50
FriOI GRGCYC 2 cut(s) 140, 652
GsuI CTGGAG 1 cut(s) 134
HapII CCGG 5 cut(s) 161, 179, 363, 542, 557
HindIII AAGCTT 1 cut(s) 32
HinfI GANTC 7 cut(s) 52, 157, 175, 212, 223, 262, 300
HpaII CCGG 5 cut(s) 161, 179, 363, 542, 557
Hpy166II GTNNAC 1 cut(s) 200
Hpy188I TCNGA 4 cut(s) 22, 66, 211, 261
Hpy188III TCNNGA 4 cut(s) 227, 272, 604, 620
Hpy8I GTNNAC 1 cut(s) 200
Hpy99I CGWCG 3 cut(s) 320, 397, 527
Kzo9I GATC 3 cut(s) 11, 274, 519
LmnI GCTCC 1 cut(s) 115
LpnPI CCDG 9 cut(s) 98, 125, 174, 192, 289, 376, 555, 570, 633
LweI GCATC 2 cut(s) 367, 640
MaeIII GTNAC 1 cut(s) 334
MalI GATC 3 cut(s) 13, 276, 521
MboI GATC 3 cut(s) 11, 274, 519
MboII GAAGA 3 cut(s) 257, 370, 635
MfeI CAATTG 1 cut(s) 152
MflI RGATCY 1 cut(s) 274
MhlI GDGCHC 2 cut(s) 140, 652
MluCI AATT 4 cut(s) 16, 152, 311, 580
MlyI GAGTC 1 cut(s) 61
MmeI TCCRAC 1 cut(s) 44
MnlI CCTC 5 cut(s) 16, 60, 279, 508, 627
MseI TTAA 3 cut(s) 90, 576, 636
MspCI CTTAAG 1 cut(s) 635
MspI CCGG 5 cut(s) 161, 179, 363, 542, 557
MspR9I CCNGG 2 cut(s) 113, 557
MunI CAATTG 1 cut(s) 152
MvaI CCWGG 1 cut(s) 113
NciI CCSGG 1 cut(s) 557
NdeII GATC 3 cut(s) 11, 274, 519
NlaIV GGNNCC 1 cut(s) 540
NmuCI GTSAC 1 cut(s) 334
PfeI GAWTC 6 cut(s) 157, 175, 212, 223, 262, 300
PfoI TCCNGGA 2 cut(s) 111, 555
PleI GAGTC 1 cut(s) 60
PpsI GAGTC 1 cut(s) 60
Psp124BI GAGCTC 2 cut(s) 140, 652
Psp6I CCWGG 1 cut(s) 111
PspGI CCWGG 1 cut(s) 111
PspN4I GGNNCC 1 cut(s) 540
PsrI GAACNNNNNNTAC 2 cut(s) 522, 554
PsuI RGATCY 1 cut(s) 274
RsaI GTAC 1 cut(s) 641
RsaNI GTAC 1 cut(s) 640
SacI GAGCTC 2 cut(s) 140, 652
SaqAI TTAA 3 cut(s) 90, 576, 636
Sau3AI GATC 3 cut(s) 11, 274, 519
SchI GAGTC 1 cut(s) 61
ScrFI CCNGG 2 cut(s) 113, 557
SduI GDGCHC 2 cut(s) 140, 652
SetI ASST 6 cut(s) 36, 97, 140, 429, 537, 652
SfaNI GCATC 2 cut(s) 367, 640
SmlI CTYRAG 3 cut(s) 227, 270, 635
SmoI CTYRAG 3 cut(s) 227, 270, 635
Sse9I AATT 4 cut(s) 16, 152, 311, 580
SsiI CCGC 1 cut(s) 5
SstI GAGCTC 2 cut(s) 140, 652
StyD4I CCNGG 2 cut(s) 111, 555
TaqI TCGA 2 cut(s) 298, 318
TasI AATT 4 cut(s) 16, 152, 311, 580
TatI WGTACW 1 cut(s) 639
TfiI GAWTC 6 cut(s) 157, 175, 212, 223, 262, 300
Tru1I TTAA 3 cut(s) 90, 576, 636
Tru9I TTAA 3 cut(s) 90, 576, 636
TseFI GTSAC 1 cut(s) 334
Tsp45I GTSAC 1 cut(s) 334
TspDTI ATGAA 4 cut(s) 155, 179, 336, 359
TspGWI ACGGA 2 cut(s) 267, 527
Vha464I CTTAAG 1 cut(s) 635
XapI RAATTY 3 cut(s) 16, 311, 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.